Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:?1 7.51167610
2R:R:I85 4.1875406
3R:R:N92 7.2625449
4R:R:I96 3.705446
5R:R:L105 5.6275438
6R:R:N110 5.1425439
7R:R:F112 9.09833628
8R:R:V127 6.285418
9R:R:M128 6.43408
10R:R:W141 6.94333617
11R:R:L143 5.56405
12R:R:C148 3.925419
13R:R:W151 6.92667615
14R:R:I152 4.5875415
15R:R:D155 6.545418
16R:R:L157 3.985406
17R:R:H165 7.18528
18R:R:Y174 4.728508
19R:R:H183 3.2075407
20R:R:K195 13.635426
21R:R:W200 4.04529
22R:R:I206 4.2175416
23R:R:I210 4.36406
24R:R:F222 3.0375402
25R:R:C227 6.2275419
26R:R:F243 9.752518
27R:R:L261 5.3825408
28R:R:F329 6.842508
29R:R:F332 4.91519
30R:R:W336 5.8675408
31R:R:F339 6.22517
32R:R:F340 11.7875417
33R:R:I358 2.62404
34R:R:W367 8.66416
35R:R:Y370 6.98667617
36R:R:V375 3.42406
37R:R:N376 4.4225409
38R:R:T381 7.2875407
39R:R:Y387 7.705638
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:?1 R:R:D155 1005.19YesYes108
2R:R:D155 R:R:Y370 24.610310.34YesYes187
3R:R:M128 R:R:Y370 30.68118.38YesYes087
4R:R:I85 R:R:M128 15.11465.83YesYes068
5R:R:W367 R:R:Y370 16.92216.75YesYes167
6L:L:?1 R:R:S159 61.44739.02YesNo007
7R:R:S159 R:R:W336 60.91686.18NoYes078
8R:R:S372 R:R:W336 39.57438.65NoYes098
9R:R:M335 R:R:S372 16.16246.13NoNo089
10R:R:M128 R:R:T88 16.22794.52YesNo087
11R:R:D155 R:R:V127 51.6117.3YesYes188
12R:R:L123 R:R:V127 76.48982.98NoYes078
13R:R:L123 R:R:S373 69.14216.01NoNo079
14R:R:D120 R:R:S373 75.71058.83NoNo099
15R:R:D120 R:R:P377 74.20434.83NoNo099
16R:R:N92 R:R:P377 69.60713.26YesNo099
17R:R:I96 R:R:N92 55.33077.08YesYes469
18R:R:M121 R:R:N92 13.641114.02NoYes079
19R:R:I93 R:R:M121 11.66341.46NoNo037
20R:R:I118 R:R:I96 52.1482.94NoYes066
21R:R:I118 R:R:M114 50.45194.37NoNo065
22R:R:M114 R:R:V99 48.71647.61NoNo057
23R:R:V99 R:R:Y387 32.01053.79NoYes378
24R:R:T381 R:R:Y387 11.879519.97YesYes078
25R:R:N110 R:R:V99 14.95094.43YesNo397
26L:L:?1 R:R:V156 27.51158.95YesNo006
27R:R:S207 R:R:V156 21.54556.46NoNo076
28R:R:L157 R:R:S207 20.64834.5YesNo067
29R:R:L157 R:R:W200 24.70863.42YesYes069
30R:R:H165 R:R:W200 21.05445.29YesYes289
31R:R:F112 R:R:H165 15.95287.92YesYes288
32R:R:N376 R:R:S372 23.895.96YesNo099
33R:R:L116 R:R:N376 12.64574.12NoYes099
34R:R:D155 R:R:W151 29.56123.35YesYes185
35R:R:C227 R:R:W151 27.33465.22YesYes195
36R:R:C227 R:R:W141 16.60779.14YesYes197
37R:R:V130 R:R:W151 13.8913.48NoYes045
38R:R:V130 R:R:W141 12.16113.68NoYes047
39R:R:I135 R:R:W367 11.92532.35NoYes056
40R:R:L143 R:R:W141 14.767514.81YesYes057
41R:R:C148 R:R:C227 18.67717.28YesYes199
42R:R:C148 R:R:F222 10.7992.79YesYes092
43R:R:I152 R:R:W151 15.28493.52YesYes155
44R:R:I210 R:R:V156 19.44994.61YesNo066
45R:R:I152 R:R:I210 22.44924.42YesYes056
46L:L:?1 R:R:F339 15.33739.98YesYes107
47R:R:F339 R:R:N343 10.68767.25YesNo077
48R:R:N343 R:R:V235 12.01055.91NoNo076
49R:R:I210 R:R:P211 18.49383.39YesNo065
50L:L:?1 R:R:S242 18.30393.28YesNo106
51R:R:I206 R:R:S242 12.44273.1YesNo166
52R:R:F332 R:R:W336 46.90243.01YesYes098
53L:L:?1 R:R:F340 39.74468.65YesYes107
54R:R:F243 R:R:F340 53.326825.72YesYes187
55R:R:F243 R:R:F332 48.95875.36YesYes189
56R:R:I206 R:R:V241 14.30263.07YesNo064
57R:R:F240 R:R:V241 10.34052.62NoNo044
58R:R:F332 R:R:M250 88.1147.46YesNo098
59R:R:F329 R:R:M250 86.09043.73YesNo088
60R:R:F329 R:R:Y254 76.692918.57YesNo089
61R:R:I258 R:R:Y254 71.93193.63NoNo059
62R:R:C322 R:R:I258 69.52851.64NoNo075
63R:R:C322 R:R:L261 64.99024.76NoYes078
64R:R:I177 R:R:L261 57.62288.56NoYes098
65R:R:I177 R:R:T257 34.14546.08NoNo099
66R:R:T257 R:R:Y174 31.62413.75NoYes098
67R:R:I177 R:R:S260 21.01513.1NoNo096
68R:R:Q178 R:R:S260 15.98564.33NoNo066
69R:R:V175 R:R:Y174 13.64771.26NoYes058
70R:R:H183 R:R:V175 10.9431.38YesNo075
71R:R:N179 R:R:Q178 13.64779.24NoNo066
72R:R:P211 R:R:V212 11.93841.77NoNo055
73R:R:F234 R:R:I210 10.4655.02NoYes076
74R:R:V235 R:R:V347 16.81073.21NoNo065
75R:R:L236 R:R:V347 12.6852.98NoNo065
76R:R:M335 R:R:V375 10.92343.04NoYes086
77R:R:V375 R:R:V379 16.6473.21YesNo068
78R:R:N376 R:R:V375 13.05172.96YesYes096
79R:R:F339 R:R:L362 19.27962.44YesNo073
80R:R:F339 R:R:V366 16.81733.93YesNo076
81R:R:V366 R:R:Y370 17.21686.31NoYes067
82R:R:H165 R:R:L116 11.322911.57YesNo089
83R:R:V127 R:R:Y370 10.35365.05YesYes187
84R:R:S373 R:R:T88 10.68763.2NoNo097
85R:R:F339 R:R:F340 12.52137.5YesYes177
86R:R:V127 R:R:W151 21.76169.81YesYes185
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:?1 R:R:D155 5.19 1 Yes Yes 0 8 0 1
L:L:?1 R:R:V156 8.95 1 Yes No 0 6 0 1
L:L:?1 R:R:S159 9.02 1 Yes No 0 7 0 1
L:L:?1 R:R:S242 3.28 1 Yes No 0 6 0 1
L:L:?1 R:R:F339 9.98 1 Yes Yes 0 7 0 1
L:L:?1 R:R:F340 8.65 1 Yes Yes 0 7 0 1
R:R:V127 R:R:W151 9.81 1 Yes Yes 8 5 2 2
R:R:D155 R:R:V127 7.3 1 Yes Yes 8 8 1 2
R:R:V127 R:R:Y370 5.05 1 Yes Yes 8 7 2 2
R:R:D155 R:R:W151 3.35 1 Yes Yes 8 5 1 2
R:R:D155 R:R:Y370 10.34 1 Yes Yes 8 7 1 2
R:R:S207 R:R:V156 6.46 0 No No 7 6 2 1
R:R:I210 R:R:V156 4.61 0 Yes No 6 6 2 1
R:R:S159 R:R:W336 6.18 0 No Yes 7 8 1 2
R:R:I206 R:R:T160 7.6 1 Yes No 6 7 2 2
R:R:S242 R:R:T160 6.4 1 No No 6 7 1 2
R:R:I206 R:R:S207 3.1 1 Yes No 6 7 2 2
R:R:I206 R:R:S242 3.1 1 Yes No 6 6 2 1
R:R:F340 R:R:S239 5.28 1 Yes No 7 6 1 2
R:R:N343 R:R:S239 2.98 0 No No 7 6 2 2
R:R:F243 R:R:F340 25.72 1 Yes Yes 8 7 2 1
R:R:F339 R:R:F340 7.5 1 Yes Yes 7 7 1 1
R:R:F339 R:R:N343 7.25 1 Yes No 7 7 1 2
R:R:F339 R:R:V366 3.93 1 Yes No 7 6 1 2
R:R:V366 R:R:Y370 6.31 0 No Yes 6 7 2 2
R:R:F339 R:R:L362 2.44 1 Yes No 7 3 1 2

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 9AS2_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 2.94
Number of Linked Nodes 239
Number of Links 264
Number of Hubs 39
Number of Links mediated by Hubs 141
Number of Communities 4
Number of Nodes involved in Communities 34
Number of Links involved in Communities 46
Path Summary
Number Of Nodes in MetaPath 87
Number Of Links MetaPath 86
Number of Shortest Paths 39866
Length Of Smallest Path 3
Average Path Length 13.5835
Length of Longest Path 31
Minimum Path Strength 1.305
Average Path Strength 6.05843
Maximum Path Strength 17.685
Minimum Path Correlation 0.7
Average Path Correlation 0.917894
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 3.57143
Average % Of Corr. Nodes 45.3411
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 45.7793
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier• G protein-coupled receptor-like
SCOP2Family Identifier• G protein-coupled receptor-like
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeA1A
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodeA1A
Name6-AMINO HEXANOIC ACID
Synonyms
Identifier
FormulaC33 H40 N4 O6
Molecular Weight588.694
SMILES
PubChem5327090
Formal Charge0
Total Atoms83
Total Chiral Atoms4
Total Bonds86
Total Aromatic Bonds18

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP28223
Sequence
>9AS2_nogp_Chain_R
LLTAVVIIL TIAGNILVI MAVSLEKKL QNATNYFLM SLAIADMLL 
GFLVMPVSM LTILYGYRW PLPSKLCAV WIYLDVLFS TASIMHLCA 
ISLDRYVAI QNPIHHSRF NSRTKAFLK IIAVWTISV GISMPIPVF 
GLDSKVFKE GSCLLADDN FVLIGSFVS FFIPLTIMV ITYFLTIKS 
LQKISNEQK ACKVLGIVF FLFVVMWCP FFITNIMAV ICNEDVIGA 
LLNVFVWIG YLSSAVNPL VYTLFNKTY RSAFSRY


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
6WGTAAmine5-Hydroxytryptamine5-HT2AHomo sapiensLSD--3.42020-09-23doi.org/10.1016/j.cell.2020.08.024
6WH4AAmine5-Hydroxytryptamine5-HT2AHomo sapiensMethiothepin--3.42020-09-23doi.org/10.1016/j.cell.2020.08.024
6WHAAAmine5-Hydroxytryptamine5-HT2AHomo sapiensDB13948-chim(NtGi2L-Gs-CtGq)/β1/γ23.362020-09-23doi.org/10.1016/j.cell.2020.08.024
6WHA (No Gprot) AAmine5-Hydroxytryptamine5-HT2AHomo sapiensDB13948-3.362020-09-23doi.org/10.1016/j.cell.2020.08.024
8ZMGAAmine5-Hydroxytryptamine5-HT2AHomo sapiensPimavanserin--3.42024-08-28doi.org/10.1021/acs.jmedchem.4c01244
7RANAAmine5-Hydroxytryptamine5-HT2AHomo sapiensPubChem 164575847-chim(NtGi2L-Gs-CtGq)/β1/γ23.452022-07-06doi.org/10.1038/s41586-022-05258-z
7RAN (No Gprot) AAmine5-Hydroxytryptamine5-HT2AHomo sapiensPubChem 164575847-3.452022-07-06doi.org/10.1038/s41586-022-05258-z
7VODAAmine5-Hydroxytryptamine5-HT2AHomo sapiensCariprazine--3.32021-12-22doi.org/10.1038/s41593-021-00971-w
7VOEAAmine5-Hydroxytryptamine5-HT2AHomo sapiensAripiprazole--2.92021-12-22doi.org/10.1038/s41593-021-00971-w
6A93AAmine5-Hydroxytryptamine5-HT2AHomo sapiensRisperidone--32019-02-13doi.org/10.1038/s41594-018-0180-z
6A94AAmine5-Hydroxytryptamine5-HT2AHomo sapiensZotepine--2.92019-02-13doi.org/10.1038/s41594-018-0180-z
7WC4AAmine5-Hydroxytryptamine5-HT2AHomo sapiensSerotonin--3.22022-01-26doi.org/10.1126/science.abl8615
7WC5AAmine5-Hydroxytryptamine5-HT2AHomo sapiensPsilocin--3.22022-01-26doi.org/10.1126/science.abl8615
7WC6AAmine5-Hydroxytryptamine5-HT2AHomo sapiensLSD--2.62022-01-26doi.org/10.1126/science.abl8615
7WC7AAmine5-Hydroxytryptamine5-HT2AHomo sapiensLisuride--2.62022-01-26doi.org/10.1126/science.abl8615
7WC8AAmine5-Hydroxytryptamine5-HT2AHomo sapiensLumateperone--2.452022-01-26doi.org/10.1126/science.abl8615
7WC9AAmine5-Hydroxytryptamine5-HT2AHomo sapiensPubChem 162421364--2.52022-01-26doi.org/10.1126/science.abl8615
8UWLAAmine5-Hydroxytryptamine5-HT2AHomo sapiensLisuride-chim(NtGi2-Gs-CtGq)/β1/γ22.82024-05-29doi.org/10.1126/science.adn6354
8UWL (No Gprot) AAmine5-Hydroxytryptamine5-HT2AHomo sapiensLisuride-2.82024-05-29doi.org/10.1126/science.adn6354
8V6UAAmine5-Hydroxytryptamine5-HT2AHomo sapiensPubChem 171392456-chim(NtGi2-Gs-CtGq)/β1/γ232024-05-29doi.org/10.1126/science.adn6354
8V6U (No Gprot) AAmine5-Hydroxytryptamine5-HT2AHomo sapiensPubChem 171392456-32024-05-29doi.org/10.1126/science.adn6354
8JT8AAmine5-Hydroxytryptamine5-HT2AHomo sapiens(R)-IHCH-7179--2.72024-02-28doi.org/10.1016/j.cell.2024.02.034
9ARXAAmine5-Hydroxytryptamine5-HT2AHomo sapiensSerotonin--3.242025-04-02doi.org/10.1038/s41467-025-57956-7
9ARYAAmine5-Hydroxytryptamine5-HT2AHomo sapiensSerotonin-chim(NtGi1-Gs-CtGq)/β1/γ23.272025-04-02doi.org/10.1038/s41467-025-57956-7
9ARY (No Gprot) AAmine5-Hydroxytryptamine5-HT2AHomo sapiensSerotonin-3.272025-04-02doi.org/10.1038/s41467-025-57956-7
9ARZAAmine5-Hydroxytryptamine5-HT2AHomo sapiens2-bromo-LSD--3.372025-04-02doi.org/10.1038/s41467-025-57956-7
9AS0AAmine5-Hydroxytryptamine5-HT2AHomo sapiens2-bromo-LSD-chim(NtGi1-Gs-CtGq)/β1/γ23.382025-04-02doi.org/10.1038/s41467-025-57956-7
9AS0 (No Gprot) AAmine5-Hydroxytryptamine5-HT2AHomo sapiens2-bromo-LSD-3.382025-04-02doi.org/10.1038/s41467-025-57956-7
9AS1AAmine5-Hydroxytryptamine5-HT2AHomo sapiensDMT--3.382025-04-02doi.org/10.1038/s41467-025-57956-7
9AS2AAmine5-Hydroxytryptamine5-HT2AHomo sapiensDMT-chim(NtGi1-Gs-CtGq)/β1/γ23.212025-04-02doi.org/10.1038/s41467-025-57956-7
9AS2 (No Gprot) AAmine5-Hydroxytryptamine5-HT2AHomo sapiensDMT-3.212025-04-02doi.org/10.1038/s41467-025-57956-7
9AS3AAmine5-Hydroxytryptamine5-HT2AHomo sapiensLSD--3.182025-04-02doi.org/10.1038/s41467-025-57956-7
9AS4AAmine5-Hydroxytryptamine5-HT2AHomo sapiensLSD-chim(NtGi1-Gs-CtGq)/β1/γ23.062025-04-02doi.org/10.1038/s41467-025-57956-7
9AS4 (No Gprot) AAmine5-Hydroxytryptamine5-HT2AHomo sapiensLSD-3.062025-04-02doi.org/10.1038/s41467-025-57956-7
9AS5AAmine5-Hydroxytryptamine5-HT2AHomo sapiensMescaline--3.342025-04-02doi.org/10.1038/s41467-025-57956-7
9AS6AAmine5-Hydroxytryptamine5-HT2AHomo sapiensMescaline-chim(NtGi1-Gs-CtGq)/β1/γ23.072025-04-02doi.org/10.1038/s41467-025-57956-7
9AS6 (No Gprot) AAmine5-Hydroxytryptamine5-HT2AHomo sapiensMescaline-3.072025-04-02doi.org/10.1038/s41467-025-57956-7
9AS7AAmine5-Hydroxytryptamine5-HT2AHomo sapiensPsilocin--2.722025-04-02doi.org/10.1038/s41467-025-57956-7
9AS9AAmine5-Hydroxytryptamine5-HT2AHomo sapiensRS130-180--3.472025-04-02doi.org/10.1038/s41467-025-57956-7
9ASAAAmine5-Hydroxytryptamine5-HT2AHomo sapiensRS130-180-chim(NtGi1-Gs-CtGq)/β1/γ23.122025-04-02doi.org/10.1038/s41467-025-57956-7
9ASA (No Gprot) AAmine5-Hydroxytryptamine5-HT2AHomo sapiensRS130-180-3.122025-04-02doi.org/10.1038/s41467-025-57956-7




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Download 9AS2_nogp.zip



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