Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:?1 7.27556910
2R:R:N92 7.12419
3R:R:V95 3.9875409
4R:R:L105 8.12438
5R:R:N110 9.1675439
6R:R:L116 5.72419
7R:R:L123 3.78167617
8R:R:L126 3.21415
9R:R:M128 6.69667618
10R:R:W141 7.89625827
11R:R:W151 9.2675425
12R:R:D155 7.002518
13R:R:L157 5.146516
14R:R:F158 6.0875417
15R:R:M164 3.8075406
16R:R:H165 6.2325408
17R:R:Y174 4.465408
18R:R:H183 7.824507
19R:R:I210 3.805426
20R:R:L215 4.1405
21R:R:F222 4.76422
22R:R:F243 9.915618
23R:R:P246 3.475409
24R:R:Y254 13.394509
25R:R:L261 4.0475408
26R:R:F332 4.85409
27R:R:W336 6.40286718
28R:R:F339 5.5475417
29R:R:F340 9.006517
30R:R:F365 4.2875405
31R:R:W367 4.18406
32R:R:Y370 10.6125417
33R:R:V375 2.515406
34R:R:N376 5.9375419
35R:R:Y380 7.7825409
36R:R:T386 5.1525436
37R:R:Y387 5.235638
38R:R:Y394 8.5075404
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:?1 R:R:D155 31.61878.9YesYes108
2R:R:D155 R:R:V127 33.73658.76YesNo088
3R:R:V127 R:R:W151 32.51826.13NoYes085
4R:R:S131 R:R:W151 13.31822.47NoYes075
5R:R:S131 R:R:W367 12.03442.47NoYes076
6R:R:D155 R:R:L123 10.82494.07YesYes187
7R:R:F158 R:R:L123 13.80734.87YesYes177
8R:R:F158 R:R:L122 11.76810.96YesNo177
9R:R:L122 R:R:M121 12.36634.24NoNo177
10L:L:?1 R:R:W336 71.18474.98YesYes108
11R:R:L166 R:R:W336 44.88894.56NoYes188
12R:R:L166 R:R:N376 40.88032.75NoYes189
13R:R:N376 R:R:Y380 1009.3YesYes099
14R:R:V95 R:R:Y380 23.32653.79YesYes099
15R:R:F332 R:R:W336 52.60478.02YesYes098
16R:R:F332 R:R:N376 49.84944.83YesYes099
17R:R:M121 R:R:N92 10.117514.02NoYes179
18R:R:F391 R:R:V95 12.44055.24NoYes069
19R:R:Y380 R:R:Y387 37.70143.97YesYes098
20R:R:V99 R:R:Y387 12.28333.79NoYes378
21R:R:M114 R:R:V99 11.79426.09NoNo057
22R:R:A98 R:R:Y387 10.60652.67NoYes078
23R:R:M114 R:R:Y111 11.25715.99NoNo054
24R:R:L113 R:R:Y380 58.333714.07NoYes089
25R:R:H165 R:R:L116 11.1966.43YesYes089
26R:R:I169 R:R:L113 54.55222.85NoNo098
27R:R:W141 R:R:W151 18.261214.99YesYes275
28L:L:?1 R:R:V156 27.49664.88YesNo006
29R:R:I210 R:R:V156 23.04274.61YesNo066
30R:R:I210 R:R:P211 15.39673.39YesNo065
31R:R:L215 R:R:P211 15.89891.64YesNo055
32R:R:A149 R:R:L215 11.27464.73NoYes065
33R:R:F243 R:R:W336 19.24817.02YesYes188
34L:L:?1 R:R:F340 15.34439.98YesYes107
35R:R:I163 R:R:W336 17.300610.57NoYes188
36R:R:I163 R:R:P246 16.96873.39NoYes089
37R:R:I169 R:R:R173 53.15052.51NoNo099
38R:R:L325 R:R:R173 51.63976.07NoNo089
39R:R:L325 R:R:T257 36.27352.95NoNo089
40R:R:T257 R:R:Y174 25.23913.75NoYes098
41R:R:V175 R:R:Y174 13.62822.52NoYes058
42R:R:F186 R:R:V175 11.90342.62NoNo045
43R:R:I177 R:R:T257 10.30094.56NoNo099
44R:R:F240 R:R:F244 12.6856.43NoNo145
45R:R:F240 R:R:V241 10.79875.24NoNo144
46R:R:G238 R:R:V241 15.98181.84NoNo064
47R:R:G238 R:R:I237 13.67191.76NoNo064
48R:R:F340 R:R:S239 13.85533.96YesNo076
49R:R:I344 R:R:S239 11.56724.64NoNo056
50R:R:L325 R:R:Y254 15.06055.86NoYes089
51R:R:F332 R:R:V375 11.79423.93YesYes096
52R:R:F383 R:R:V379 11.12.62NoNo078
53L:L:?1 R:R:F339 16.82029.98YesYes107
54R:R:F339 R:R:L362 16.41852.44YesNo073
55R:R:L362 R:R:T342 15.17844.42NoNo035
56R:R:F365 R:R:T342 10.71575.19YesNo055
57R:R:L116 R:R:N376 13.59336.87YesYes199
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:?1 R:R:D155 8.9 1 Yes Yes 0 8 0 1
L:L:?1 R:R:V156 4.88 1 Yes No 0 6 0 1
L:L:?1 R:R:S159 9.84 1 Yes No 0 7 0 1
L:L:?1 R:R:S242 3.28 1 Yes No 0 6 0 1
L:L:?1 R:R:W336 4.98 1 Yes Yes 0 8 0 1
L:L:?1 R:R:F339 9.98 1 Yes Yes 0 7 0 1
L:L:?1 R:R:F340 9.98 1 Yes Yes 0 7 0 1
L:L:?1 R:R:G369 4.67 1 Yes No 0 7 0 1
L:L:?1 R:R:Y370 8.97 1 Yes Yes 0 7 0 1
R:R:L123 R:R:M128 2.83 1 Yes Yes 7 8 2 2
R:R:D155 R:R:L123 4.07 1 Yes Yes 8 7 1 2
R:R:L123 R:R:S159 4.5 1 Yes No 7 7 2 1
R:R:D155 R:R:V127 8.76 1 Yes No 8 8 1 2
R:R:M128 R:R:Y370 15.57 1 Yes Yes 8 7 2 1
R:R:D155 R:R:S159 2.94 1 Yes No 8 7 1 1
R:R:D155 R:R:Y370 10.34 1 Yes Yes 8 7 1 1
R:R:S207 R:R:V156 3.23 1 No No 7 6 2 1
R:R:I210 R:R:V156 4.61 2 Yes No 6 6 2 1
R:R:I206 R:R:T160 3.04 1 No No 6 7 2 2
R:R:S242 R:R:T160 7.99 1 No No 6 7 1 2
R:R:F243 R:R:I163 5.02 1 Yes No 8 8 2 2
R:R:I163 R:R:W336 10.57 1 No Yes 8 8 2 1
R:R:L166 R:R:W336 4.56 1 No Yes 8 8 2 1
R:R:I206 R:R:S242 4.64 1 No No 6 6 2 1
R:R:F340 R:R:S239 3.96 1 Yes No 7 6 1 2
R:R:F243 R:R:F244 7.5 1 Yes No 8 5 2 2
R:R:F243 R:R:W336 7.02 1 Yes Yes 8 8 2 1
R:R:F243 R:R:F340 23.58 1 Yes Yes 8 7 2 1
R:R:F244 R:R:F340 4.29 1 No Yes 5 7 2 1
R:R:M250 R:R:W336 3.49 0 No Yes 8 8 2 1
R:R:F332 R:R:W336 8.02 0 Yes Yes 9 8 2 1
R:R:S372 R:R:W336 6.18 0 No Yes 9 8 2 1
R:R:F339 R:R:F340 3.22 1 Yes Yes 7 7 1 1
R:R:F339 R:R:V366 6.55 1 Yes No 7 6 1 2
R:R:V366 R:R:Y370 7.57 0 No Yes 6 7 2 1
R:R:G369 R:R:S372 3.71 0 No No 7 9 1 2
R:R:F339 R:R:L362 2.44 1 Yes No 7 3 1 2

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 9ASA_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 2.67
Number of Linked Nodes 247
Number of Links 284
Number of Hubs 38
Number of Links mediated by Hubs 147
Number of Communities 3
Number of Nodes involved in Communities 48
Number of Links involved in Communities 69
Path Summary
Number Of Nodes in MetaPath 58
Number Of Links MetaPath 57
Number of Shortest Paths 45879
Length Of Smallest Path 3
Average Path Length 11.6252
Length of Longest Path 25
Minimum Path Strength 1.395
Average Path Strength 5.75264
Maximum Path Strength 24.755
Minimum Path Correlation 0.7
Average Path Correlation 0.919563
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 5
Average % Of Corr. Nodes 47.409
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 45.26
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain   • G protein-coupled receptor-like
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain   • G protein-coupled receptor-like
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeA1A
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodeA1A
Name6-AMINO HEXANOIC ACID
Synonyms
Identifier
FormulaC33 H40 N4 O6
Molecular Weight588.694
SMILES
PubChem5327090
Formal Charge0
Total Atoms83
Total Chiral Atoms4
Total Bonds86
Total Aromatic Bonds18

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP28223
Sequence
>9ASA_nogp_Chain_R
VVIILTIAG NILVIMAVS LEKKLQNAT NYFLMSLAI ADMLLGFLV 
MPVSMLTIL YGYRWPLPS KLCAVWIYL DVLFSTASI MHLCAISLD 
RYVAIQNPI HHSRFNSRT KAFLKIIAV WTISVGISM PIPVFGLQD 
DSKVFKEGS CLLADDNFV LIGSFVSFF IPLTIMVIT YFLTIKSLQ 
KISNEQKAC KVLGIVFFL FVVMWCPFF ITNIMAVIC KESCNEDVI 
GALLNVFVW IGYLSSAVN PLVYTLFNK TYRSAFSRY


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
6WGTAAmine5-Hydroxytryptamine5-HT2AHomo sapiensLSD--3.42020-09-23doi.org/10.1016/j.cell.2020.08.024
6WH4AAmine5-Hydroxytryptamine5-HT2AHomo sapiensMethiothepin--3.42020-09-23doi.org/10.1016/j.cell.2020.08.024
6WHAAAmine5-Hydroxytryptamine5-HT2AHomo sapiensDB13948-chim(NtGi2L-Gs-CtGq)/β1/γ23.362020-09-23doi.org/10.1016/j.cell.2020.08.024
6WHA (No Gprot) AAmine5-Hydroxytryptamine5-HT2AHomo sapiensDB13948-3.362020-09-23doi.org/10.1016/j.cell.2020.08.024
8ZMGAAmine5-Hydroxytryptamine5-HT2AHomo sapiensPimavanserin--3.42024-08-28doi.org/10.1021/acs.jmedchem.4c01244
7RANAAmine5-Hydroxytryptamine5-HT2AHomo sapiensPubChem 164575847-chim(NtGi2L-Gs-CtGq)/β1/γ23.452022-07-06doi.org/10.1038/s41586-022-05258-z
7RAN (No Gprot) AAmine5-Hydroxytryptamine5-HT2AHomo sapiensPubChem 164575847-3.452022-07-06doi.org/10.1038/s41586-022-05258-z
7VODAAmine5-Hydroxytryptamine5-HT2AHomo sapiensCariprazine--3.32021-12-22doi.org/10.1038/s41593-021-00971-w
7VOEAAmine5-Hydroxytryptamine5-HT2AHomo sapiensAripiprazole--2.92021-12-22doi.org/10.1038/s41593-021-00971-w
6A93AAmine5-Hydroxytryptamine5-HT2AHomo sapiensRisperidone--32019-02-13doi.org/10.1038/s41594-018-0180-z
6A94AAmine5-Hydroxytryptamine5-HT2AHomo sapiensZotepine--2.92019-02-13doi.org/10.1038/s41594-018-0180-z
7WC4AAmine5-Hydroxytryptamine5-HT2AHomo sapiensSerotonin--3.22022-01-26doi.org/10.1126/science.abl8615
7WC5AAmine5-Hydroxytryptamine5-HT2AHomo sapiensPsilocin--3.22022-01-26doi.org/10.1126/science.abl8615
7WC6AAmine5-Hydroxytryptamine5-HT2AHomo sapiensLSD--2.62022-01-26doi.org/10.1126/science.abl8615
7WC7AAmine5-Hydroxytryptamine5-HT2AHomo sapiensLisuride--2.62022-01-26doi.org/10.1126/science.abl8615
7WC8AAmine5-Hydroxytryptamine5-HT2AHomo sapiensLumateperone--2.452022-01-26doi.org/10.1126/science.abl8615
7WC9AAmine5-Hydroxytryptamine5-HT2AHomo sapiensPubChem 162421364--2.52022-01-26doi.org/10.1126/science.abl8615
8UWLAAmine5-Hydroxytryptamine5-HT2AHomo sapiensLisuride-chim(NtGi2-Gs-CtGq)/β1/γ22.82024-05-29doi.org/10.1126/science.adn6354
8UWL (No Gprot) AAmine5-Hydroxytryptamine5-HT2AHomo sapiensLisuride-2.82024-05-29doi.org/10.1126/science.adn6354
8V6UAAmine5-Hydroxytryptamine5-HT2AHomo sapiensPubChem 171392456-chim(NtGi2-Gs-CtGq)/β1/γ232024-05-29doi.org/10.1126/science.adn6354
8V6U (No Gprot) AAmine5-Hydroxytryptamine5-HT2AHomo sapiensPubChem 171392456-32024-05-29doi.org/10.1126/science.adn6354
8JT8AAmine5-Hydroxytryptamine5-HT2AHomo sapiens(R)-IHCH-7179--2.72024-02-28doi.org/10.1016/j.cell.2024.02.034
9ARXAAmine5-Hydroxytryptamine5-HT2AHomo sapiensSerotonin--3.242025-04-02doi.org/10.1038/s41467-025-57956-7
9ARYAAmine5-Hydroxytryptamine5-HT2AHomo sapiensSerotonin-chim(NtGi1-Gs-CtGq)/β1/γ23.272025-04-02doi.org/10.1038/s41467-025-57956-7
9ARY (No Gprot) AAmine5-Hydroxytryptamine5-HT2AHomo sapiensSerotonin-3.272025-04-02doi.org/10.1038/s41467-025-57956-7
9ARZAAmine5-Hydroxytryptamine5-HT2AHomo sapiens2-bromo-LSD--3.372025-04-02doi.org/10.1038/s41467-025-57956-7
9AS0AAmine5-Hydroxytryptamine5-HT2AHomo sapiens2-bromo-LSD-chim(NtGi1-Gs-CtGq)/β1/γ23.382025-04-02doi.org/10.1038/s41467-025-57956-7
9AS0 (No Gprot) AAmine5-Hydroxytryptamine5-HT2AHomo sapiens2-bromo-LSD-3.382025-04-02doi.org/10.1038/s41467-025-57956-7
9AS1AAmine5-Hydroxytryptamine5-HT2AHomo sapiensDMT--3.382025-04-02doi.org/10.1038/s41467-025-57956-7
9AS2AAmine5-Hydroxytryptamine5-HT2AHomo sapiensDMT-chim(NtGi1-Gs-CtGq)/β1/γ23.212025-04-02doi.org/10.1038/s41467-025-57956-7
9AS2 (No Gprot) AAmine5-Hydroxytryptamine5-HT2AHomo sapiensDMT-3.212025-04-02doi.org/10.1038/s41467-025-57956-7
9AS3AAmine5-Hydroxytryptamine5-HT2AHomo sapiensLSD--3.182025-04-02doi.org/10.1038/s41467-025-57956-7
9AS4AAmine5-Hydroxytryptamine5-HT2AHomo sapiensLSD-chim(NtGi1-Gs-CtGq)/β1/γ23.062025-04-02doi.org/10.1038/s41467-025-57956-7
9AS4 (No Gprot) AAmine5-Hydroxytryptamine5-HT2AHomo sapiensLSD-3.062025-04-02doi.org/10.1038/s41467-025-57956-7
9AS5AAmine5-Hydroxytryptamine5-HT2AHomo sapiensMescaline--3.342025-04-02doi.org/10.1038/s41467-025-57956-7
9AS6AAmine5-Hydroxytryptamine5-HT2AHomo sapiensMescaline-chim(NtGi1-Gs-CtGq)/β1/γ23.072025-04-02doi.org/10.1038/s41467-025-57956-7
9AS6 (No Gprot) AAmine5-Hydroxytryptamine5-HT2AHomo sapiensMescaline-3.072025-04-02doi.org/10.1038/s41467-025-57956-7
9AS7AAmine5-Hydroxytryptamine5-HT2AHomo sapiensPsilocin--2.722025-04-02doi.org/10.1038/s41467-025-57956-7
9AS9AAmine5-Hydroxytryptamine5-HT2AHomo sapiensRS130-180--3.472025-04-02doi.org/10.1038/s41467-025-57956-7
9ASAAAmine5-Hydroxytryptamine5-HT2AHomo sapiensRS130-180-chim(NtGi1-Gs-CtGq)/β1/γ23.122025-04-02doi.org/10.1038/s41467-025-57956-7
9ASA (No Gprot) AAmine5-Hydroxytryptamine5-HT2AHomo sapiensRS130-180-3.122025-04-02doi.org/10.1038/s41467-025-57956-7




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