Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:?1 9.4061010
2R:R:I85 3.428506
3R:R:V95 3.135409
4R:R:N110 5.885439
5R:R:F112 7.31428
6R:R:D120 6.48509
7R:R:V127 5.73418
8R:R:M128 7.715408
9R:R:W141 6.588517
10R:R:W151 8.76333615
11R:R:L157 4.65446
12R:R:F158 6.395407
13R:R:H165 7.95667628
14R:R:L166 6.305408
15R:R:H183 4.13407
16R:R:K195 5.415406
17R:R:W200 6.244529
18R:R:C227 6.23419
19R:R:F234 5.3225407
20R:R:F243 8.14618
21R:R:P246 3.895409
22R:R:L256 3.4425405
23R:R:I258 4.5925405
24R:R:L261 4.02408
25R:R:F332 4.886519
26R:R:M335 3.3475408
27R:R:W336 4.655618
28R:R:F339 6.994517
29R:R:F340 9.548517
30R:R:W367 6.495416
31R:R:Y370 8.15857717
32R:R:Y380 5.908529
33R:R:Y387 8.424538
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:?1 R:R:F340 1007.62YesYes107
2R:R:F340 R:R:W336 73.78114.01YesYes178
3R:R:S372 R:R:W336 25.26834.94NoYes098
4R:R:M335 R:R:S372 18.48364.6YesNo089
5L:L:?1 R:R:Y370 45.45385.5YesYes107
6R:R:M128 R:R:Y370 24.21811.97YesYes087
7R:R:I85 R:R:M128 12.29684.37YesYes068
8R:R:W367 R:R:Y370 28.894516.4YesYes167
9R:R:I85 R:R:W367 13.17853.52YesYes066
10L:L:?1 R:R:W151 35.602610.68YesYes105
11R:R:V127 R:R:W151 20.30827.36YesYes185
12R:R:L123 R:R:V127 49.61674.47NoYes078
13R:R:L123 R:R:S373 55.30514.5NoNo079
14R:R:D120 R:R:S373 55.397110.31YesNo099
15R:R:V127 R:R:Y370 24.5633.79YesYes187
16R:R:N376 R:R:S372 25.49835.96NoNo099
17R:R:D120 R:R:N376 37.69554.04YesNo099
18R:R:D120 R:R:N92 77.22326.73YesNo099
19R:R:N92 R:R:P377 67.801311.4NoNo099
20R:R:P377 R:R:V95 65.24841.77NoYes099
21R:R:F391 R:R:V95 19.04322.62NoYes069
22R:R:T381 R:R:V95 42.70164.76NoYes079
23R:R:T381 R:R:Y387 38.055814.98NoYes078
24R:R:N110 R:R:Y387 16.46739.3YesYes398
25R:R:N110 R:R:V99 11.36927.39YesNo097
26R:R:F243 R:R:F340 51.724924.65YesYes187
27R:R:F243 R:R:F332 43.63694.29YesYes189
28R:R:F332 R:R:L166 89.44343.65YesYes098
29R:R:L116 R:R:L166 36.54554.15NoYes098
30R:R:H165 R:R:L116 37.710810.29YesNo089
31R:R:F112 R:R:H165 26.16539.05YesYes288
32R:R:F112 R:R:K195 34.70569.93YesYes086
33R:R:K191 R:R:K195 11.86755.75NoYes066
34R:R:F332 R:R:W336 38.62314.01YesYes198
35R:R:L166 R:R:Y380 85.303610.55YesYes089
36R:R:I169 R:R:Y380 13.99116.04NoYes299
37R:R:F112 R:R:I169 16.09175.02YesNo289
38R:R:F158 R:R:L123 22.53147.31YesNo077
39L:L:?1 R:R:V156 20.998212.81YesNo006
40R:R:S207 R:R:V156 10.68693.23NoNo076
41R:R:F158 R:R:L157 13.30116.09YesYes076
42R:R:W141 R:R:W151 23.428412.18YesYes175
43R:R:I135 R:R:W367 17.33362.35NoYes056
44R:R:I135 R:R:N363 15.44014.25NoNo054
45R:R:N363 R:R:Y139 13.554110.47NoNo043
46R:R:C148 R:R:W141 11.03196.53NoYes197
47R:R:C227 R:R:W151 15.27913.92YesYes195
48R:R:C148 R:R:C227 11.41527.28NoYes199
49R:R:C148 R:R:F222 17.99296.98NoNo092
50L:L:?1 R:R:L229 42.91633.25YesNo004
51R:R:L157 R:R:V204 10.57192.98YesNo064
52R:R:I163 R:R:W336 22.08683.52NoYes188
53R:R:I163 R:R:P246 30.58883.39NoYes089
54R:R:M164 R:R:P246 10.47995.03NoYes069
55R:R:R173 R:R:Y380 59.38364.12NoYes299
56R:R:F332 R:R:M250 11.25428.71YesNo098
57R:R:D172 R:R:K195 18.51432.77NoYes096
58R:R:D172 R:R:H183 13.37015.04NoYes097
59R:R:L325 R:R:R173 61.58394.86NoNo089
60R:R:F243 R:R:F244 13.79186.43YesNo085
61R:R:F240 R:R:F244 11.63753.22NoNo045
62R:R:I245 R:R:T248 20.89081.52NoNo053
63R:R:I252 R:R:T248 17.98531.52NoNo053
64R:R:I252 R:R:L256 15.36342.85NoYes055
65R:R:L256 R:R:Y174 12.97155.86YesNo058
66R:R:Q178 R:R:Y174 16.904312.4NoNo068
67R:R:I245 R:R:P246 14.47413.39NoYes059
68R:R:L325 R:R:T257 29.45422.95NoNo089
69R:R:T257 R:R:Y174 16.03044.99NoNo098
70R:R:I177 R:R:T257 13.31654.56NoNo099
71R:R:F234 R:R:L229 33.8476.09YesNo074
72R:R:D231 R:R:F234 26.52567.17NoYes057
73R:R:D231 R:R:K220 13.699812.44NoNo053
74R:R:I258 R:R:L325 32.25242.85YesNo058
75R:R:I258 R:R:Y254 14.213410.88YesNo059
76R:R:C322 R:R:I258 13.40853.27NoYes075
77R:R:I177 R:R:L261 10.54122.85NoYes098
78R:R:E318 R:R:L261 10.49525.3NoYes088
79R:R:C322 R:R:L261 10.74826.35NoYes078
80R:R:F339 R:R:L362 25.5752.44YesNo073
81R:R:L362 R:R:T342 23.20615.9NoNo035
82R:R:F365 R:R:T342 14.59689.08NoNo055
83R:R:F391 R:R:L382 11.08564.87NoNo065
84R:R:I85 R:R:I89 12.59582.94YesNo065
85R:R:D217 R:R:K220 10.29591.38NoNo043
86R:R:D120 R:R:L116 37.88715.43YesNo099
87R:R:F339 R:R:F340 22.22487.5YesYes177
88R:R:L166 R:R:N376 23.34416.87YesNo089
89R:R:F332 R:R:I163 10.84793.77YesNo198
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:?1 R:R:W151 10.68 1 Yes Yes 0 5 0 1
L:L:?1 R:R:D155 25.46 1 Yes No 0 8 0 1
L:L:?1 R:R:V156 12.81 1 Yes No 0 6 0 1
L:L:?1 R:R:S159 9.39 1 Yes No 0 7 0 1
L:L:?1 R:R:L229 3.25 1 Yes No 0 4 0 1
L:L:?1 R:R:S242 4.7 1 Yes No 0 6 0 1
L:L:?1 R:R:F339 11.43 1 Yes Yes 0 7 0 1
L:L:?1 R:R:F340 7.62 1 Yes Yes 0 7 0 1
L:L:?1 R:R:N343 3.22 1 Yes No 0 7 0 1
L:L:?1 R:R:Y370 5.5 1 Yes Yes 0 7 0 1
R:R:V127 R:R:W151 7.36 1 Yes Yes 8 5 2 1
R:R:D155 R:R:V127 7.3 1 No Yes 8 8 1 2
R:R:V127 R:R:Y370 3.79 1 Yes Yes 8 7 2 1
R:R:M128 R:R:Y370 11.97 0 Yes Yes 8 7 2 1
R:R:V130 R:R:W151 12.26 0 No Yes 4 5 2 1
R:R:S131 R:R:W151 6.18 1 No Yes 7 5 2 1
R:R:S131 R:R:W367 3.71 1 No Yes 7 6 2 2
R:R:S131 R:R:Y370 5.09 1 No Yes 7 7 2 1
R:R:W141 R:R:W151 12.18 1 Yes Yes 7 5 2 1
R:R:C227 R:R:W141 10.45 1 Yes Yes 9 7 2 2
R:R:C227 R:R:W151 3.92 1 Yes Yes 9 5 2 1
R:R:D155 R:R:Y370 8.05 1 No Yes 8 7 1 1
R:R:S207 R:R:V156 3.23 4 No No 7 6 2 1
R:R:I210 R:R:V156 4.61 0 No No 6 6 2 1
R:R:S242 R:R:T160 7.99 0 No No 6 7 1 2
R:R:F234 R:R:I210 5.02 0 Yes No 7 6 2 2
R:R:L229 R:R:V221 5.96 0 No No 4 3 1 2
R:R:F234 R:R:L229 6.09 0 Yes No 7 4 2 1
R:R:N343 R:R:V235 2.96 1 No No 7 6 1 2
R:R:F340 R:R:S239 3.96 1 Yes No 7 6 1 2
R:R:F243 R:R:W336 3.01 1 Yes Yes 8 8 2 2
R:R:F243 R:R:F340 24.65 1 Yes Yes 8 7 2 1
R:R:F340 R:R:W336 4.01 1 Yes Yes 7 8 1 2
R:R:F339 R:R:F340 7.5 1 Yes Yes 7 7 1 1
R:R:F339 R:R:N343 9.67 1 Yes No 7 7 1 1
R:R:F339 R:R:V366 3.93 1 Yes No 7 6 1 2
R:R:V366 R:R:Y370 6.31 0 No Yes 6 7 2 1
R:R:W367 R:R:Y370 16.4 1 Yes Yes 6 7 2 1
R:R:F339 R:R:L362 2.44 1 Yes No 7 3 1 2

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 9AS4_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 2.95
Number of Linked Nodes 226
Number of Links 254
Number of Hubs 33
Number of Links mediated by Hubs 132
Number of Communities 4
Number of Nodes involved in Communities 33
Number of Links involved in Communities 48
Path Summary
Number Of Nodes in MetaPath 90
Number Of Links MetaPath 89
Number of Shortest Paths 40867
Length Of Smallest Path 3
Average Path Length 11.1601
Length of Longest Path 22
Minimum Path Strength 1.25
Average Path Strength 6.20984
Maximum Path Strength 19.2433
Minimum Path Correlation 0.7
Average Path Correlation 0.905382
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 6.25
Average % Of Corr. Nodes 46.5982
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 46.6479
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain   • G protein-coupled receptor-like
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain   • G protein-coupled receptor-like
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
Code7LD
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
Code7LD
NameLysergic acid diethylamide
SynonymsN,N-diethyl-(+)-lysergamide
Identifier
FormulaC20 H25 N3 O
Molecular Weight323.432
SMILES
PubChem5761
Formal Charge0
Total Atoms49
Total Chiral Atoms2
Total Bonds52
Total Aromatic Bonds10

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP28223
Sequence
>9AS4_nogp_Chain_R
VIILTIAGN ILVIMAVLQ NATNYFLMS LAIADMLLG FLVMPVSML 
TILYGYRWP SKLCAVWIY LDVLFSTAS IMHLCAISL DRYVAIQNP 
IHHSRFNSR TKAFLKIIA VWTISVGIS MPIPVFGLQ DDSKVFKEG 
SCLLADDNF VLIGSFVSF FIPLTIMVI TYFLTIKSL QISNEQKAC 
KVLGIVFFL FVVMWCPFF ITNIMAVNE DVIGALLNV FVWIGYLSS 
AVNPLVYTL FNKTYRSAF SR


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
6WGTAAmine5-Hydroxytryptamine5-HT2AHomo sapiensLSD--3.42020-09-23doi.org/10.1016/j.cell.2020.08.024
6WH4AAmine5-Hydroxytryptamine5-HT2AHomo sapiensMethiothepin--3.42020-09-23doi.org/10.1016/j.cell.2020.08.024
6WHAAAmine5-Hydroxytryptamine5-HT2AHomo sapiensDB13948-chim(NtGi2L-Gs-CtGq)/β1/γ23.362020-09-23doi.org/10.1016/j.cell.2020.08.024
6WHA (No Gprot) AAmine5-Hydroxytryptamine5-HT2AHomo sapiensDB13948-3.362020-09-23doi.org/10.1016/j.cell.2020.08.024
8ZMGAAmine5-Hydroxytryptamine5-HT2AHomo sapiensPimavanserin--3.42024-08-28doi.org/10.1021/acs.jmedchem.4c01244
7RANAAmine5-Hydroxytryptamine5-HT2AHomo sapiensPubChem 164575847-chim(NtGi2L-Gs-CtGq)/β1/γ23.452022-07-06doi.org/10.1038/s41586-022-05258-z
7RAN (No Gprot) AAmine5-Hydroxytryptamine5-HT2AHomo sapiensPubChem 164575847-3.452022-07-06doi.org/10.1038/s41586-022-05258-z
7VODAAmine5-Hydroxytryptamine5-HT2AHomo sapiensCariprazine--3.32021-12-22doi.org/10.1038/s41593-021-00971-w
7VOEAAmine5-Hydroxytryptamine5-HT2AHomo sapiensAripiprazole--2.92021-12-22doi.org/10.1038/s41593-021-00971-w
6A93AAmine5-Hydroxytryptamine5-HT2AHomo sapiensRisperidone--32019-02-13doi.org/10.1038/s41594-018-0180-z
6A94AAmine5-Hydroxytryptamine5-HT2AHomo sapiensZotepine--2.92019-02-13doi.org/10.1038/s41594-018-0180-z
7WC4AAmine5-Hydroxytryptamine5-HT2AHomo sapiensSerotonin--3.22022-01-26doi.org/10.1126/science.abl8615
7WC5AAmine5-Hydroxytryptamine5-HT2AHomo sapiensPsilocin--3.22022-01-26doi.org/10.1126/science.abl8615
7WC6AAmine5-Hydroxytryptamine5-HT2AHomo sapiensLSD--2.62022-01-26doi.org/10.1126/science.abl8615
7WC7AAmine5-Hydroxytryptamine5-HT2AHomo sapiensLisuride--2.62022-01-26doi.org/10.1126/science.abl8615
7WC8AAmine5-Hydroxytryptamine5-HT2AHomo sapiensLumateperone--2.452022-01-26doi.org/10.1126/science.abl8615
7WC9AAmine5-Hydroxytryptamine5-HT2AHomo sapiensPubChem 162421364--2.52022-01-26doi.org/10.1126/science.abl8615
8UWLAAmine5-Hydroxytryptamine5-HT2AHomo sapiensLisuride-chim(NtGi2-Gs-CtGq)/β1/γ22.82024-05-29doi.org/10.1126/science.adn6354
8UWL (No Gprot) AAmine5-Hydroxytryptamine5-HT2AHomo sapiensLisuride-2.82024-05-29doi.org/10.1126/science.adn6354
8V6UAAmine5-Hydroxytryptamine5-HT2AHomo sapiensPubChem 171392456-chim(NtGi2-Gs-CtGq)/β1/γ232024-05-29doi.org/10.1126/science.adn6354
8V6U (No Gprot) AAmine5-Hydroxytryptamine5-HT2AHomo sapiensPubChem 171392456-32024-05-29doi.org/10.1126/science.adn6354
8JT8AAmine5-Hydroxytryptamine5-HT2AHomo sapiens(R)-IHCH-7179--2.72024-02-28doi.org/10.1016/j.cell.2024.02.034
9ARXAAmine5-Hydroxytryptamine5-HT2AHomo sapiensSerotonin--3.242025-04-02doi.org/10.1038/s41467-025-57956-7
9ARYAAmine5-Hydroxytryptamine5-HT2AHomo sapiensSerotonin-chim(NtGi1-Gs-CtGq)/β1/γ23.272025-04-02doi.org/10.1038/s41467-025-57956-7
9ARY (No Gprot) AAmine5-Hydroxytryptamine5-HT2AHomo sapiensSerotonin-3.272025-04-02doi.org/10.1038/s41467-025-57956-7
9ARZAAmine5-Hydroxytryptamine5-HT2AHomo sapiens2-bromo-LSD--3.372025-04-02doi.org/10.1038/s41467-025-57956-7
9AS0AAmine5-Hydroxytryptamine5-HT2AHomo sapiens2-bromo-LSD-chim(NtGi1-Gs-CtGq)/β1/γ23.382025-04-02doi.org/10.1038/s41467-025-57956-7
9AS0 (No Gprot) AAmine5-Hydroxytryptamine5-HT2AHomo sapiens2-bromo-LSD-3.382025-04-02doi.org/10.1038/s41467-025-57956-7
9AS1AAmine5-Hydroxytryptamine5-HT2AHomo sapiensDMT--3.382025-04-02doi.org/10.1038/s41467-025-57956-7
9AS2AAmine5-Hydroxytryptamine5-HT2AHomo sapiensDMT-chim(NtGi1-Gs-CtGq)/β1/γ23.212025-04-02doi.org/10.1038/s41467-025-57956-7
9AS2 (No Gprot) AAmine5-Hydroxytryptamine5-HT2AHomo sapiensDMT-3.212025-04-02doi.org/10.1038/s41467-025-57956-7
9AS3AAmine5-Hydroxytryptamine5-HT2AHomo sapiensLSD--3.182025-04-02doi.org/10.1038/s41467-025-57956-7
9AS4AAmine5-Hydroxytryptamine5-HT2AHomo sapiensLSD-chim(NtGi1-Gs-CtGq)/β1/γ23.062025-04-02doi.org/10.1038/s41467-025-57956-7
9AS4 (No Gprot) AAmine5-Hydroxytryptamine5-HT2AHomo sapiensLSD-3.062025-04-02doi.org/10.1038/s41467-025-57956-7
9AS5AAmine5-Hydroxytryptamine5-HT2AHomo sapiensMescaline--3.342025-04-02doi.org/10.1038/s41467-025-57956-7
9AS6AAmine5-Hydroxytryptamine5-HT2AHomo sapiensMescaline-chim(NtGi1-Gs-CtGq)/β1/γ23.072025-04-02doi.org/10.1038/s41467-025-57956-7
9AS6 (No Gprot) AAmine5-Hydroxytryptamine5-HT2AHomo sapiensMescaline-3.072025-04-02doi.org/10.1038/s41467-025-57956-7
9AS7AAmine5-Hydroxytryptamine5-HT2AHomo sapiensPsilocin--2.722025-04-02doi.org/10.1038/s41467-025-57956-7
9AS9AAmine5-Hydroxytryptamine5-HT2AHomo sapiensRS130-180--3.472025-04-02doi.org/10.1038/s41467-025-57956-7
9ASAAAmine5-Hydroxytryptamine5-HT2AHomo sapiensRS130-180-chim(NtGi1-Gs-CtGq)/β1/γ23.122025-04-02doi.org/10.1038/s41467-025-57956-7
9ASA (No Gprot) AAmine5-Hydroxytryptamine5-HT2AHomo sapiensRS130-180-3.122025-04-02doi.org/10.1038/s41467-025-57956-7




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