Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:?1 5.45571710
2R:R:T81 7.6575456
3R:R:T88 3.9225407
4R:R:N92 4.4225469
5R:R:F112 5.34167628
6R:R:D120 4.328569
7R:R:M121 3.55407
8R:R:V127 5.73418
9R:R:M128 5.288508
10R:R:W141 9.446507
11R:R:L143 4.91667675
12R:R:W151 7.114515
13R:R:Y153 7.4375486
14R:R:D155 6.445418
15R:R:L157 4.6375486
16R:R:F158 6.6975407
17R:R:H165 8.86528
18R:R:Y174 7.035408
19R:R:H183 6.652547
20R:R:W200 4.978529
21R:R:I210 4.344516
22R:R:F222 5.0125402
23R:R:L229 3.752514
24R:R:F234 5.41417
25R:R:L261 3.675408
26R:R:V328 3.0425438
27R:R:F329 8.4825408
28R:R:W336 4.36833618
29R:R:F339 6.33517
30R:R:F340 11.466517
31R:R:F365 4.4025405
32R:R:W367 8.9406
33R:R:Y370 7.8725417
34R:R:Y380 6.2725439
35R:R:Y387 8.05833608
36R:R:Y394 5404
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:?1 R:R:D155 86.7955.93YesYes108
2R:R:D155 R:R:Y370 58.20869.2YesYes187
3R:R:W367 R:R:Y370 16.95117.72YesYes067
4R:R:M128 R:R:Y370 62.570710.78YesYes087
5R:R:M128 R:R:T88 69.15953.01YesYes087
6R:R:M128 R:R:V84 14.36853.04YesNo087
7R:R:L371 R:R:V84 13.56542.98NoNo047
8L:L:?1 R:R:F339 42.54886.65YesYes107
9R:R:F339 R:R:W336 38.18223.01YesYes178
10R:R:S372 R:R:W336 31.55234.94NoYes098
11R:R:M335 R:R:S372 13.55176.13NoNo089
12R:R:L371 R:R:M335 13.22785.65NoNo048
13L:L:?1 R:R:F340 64.50544.66YesYes107
14R:R:F340 R:R:W336 35.24824.01YesYes178
15R:R:N92 R:R:T88 71.86532.92YesYes097
16R:R:D155 R:R:V127 13.10917.3YesYes188
17R:R:L123 R:R:V127 37.86734.47NoYes078
18R:R:L123 R:R:S373 37.633NoNo079
19R:R:M121 R:R:N92 82.93034.21YesYes079
20R:R:D120 R:R:S373 29.21614.42YesNo099
21R:R:I93 R:R:M121 77.42752.92NoYes037
22R:R:I93 R:R:M97 75.57492.92NoNo034
23R:R:M97 R:R:Y394 73.70418.38NoYes044
24R:R:R393 R:R:Y394 68.31083.09NoYes044
25R:R:E102 R:R:R393 66.37622.33NoNo064
26R:R:E102 R:R:L105 60.63617.95NoNo068
27R:R:L105 R:R:Y387 54.8969.38NoYes088
28R:R:A98 R:R:Y387 21.52772.67NoYes078
29R:R:A98 R:R:F391 19.42422.77NoNo076
30R:R:V99 R:R:Y387 18.71243.79NoYes078
31R:R:D120 R:R:L116 25.93084.07YesNo099
32R:R:H165 R:R:L116 24.73999YesNo089
33R:R:F112 R:R:H165 16.640810.18YesYes288
34R:R:N376 R:R:S372 20.40525.96NoNo099
35R:R:N376 R:R:Y380 17.7775.81NoYes399
36R:R:R173 R:R:Y380 11.1797.2NoYes399
37R:R:I169 R:R:R173 12.94946.26NoNo099
38R:R:F112 R:R:I169 13.18676.28YesNo089
39R:R:H165 R:R:W200 12.23318.46YesYes289
40R:R:F158 R:R:L123 12.86276.09YesNo077
41R:R:D155 R:R:W151 34.89233.35YesYes185
42R:R:V130 R:R:W151 16.86911.03NoYes045
43R:R:L143 R:R:V130 14.94342.98YesNo054
44R:R:W141 R:R:W151 48.120110.31YesYes075
45R:R:L143 R:R:W141 15.427111.39YesYes057
46R:R:F222 R:R:W141 19.57475.01YesYes027
47R:R:I210 R:R:P211 12.07343.39YesNo065
48R:R:P211 R:R:Y153 11.060413.91NoYes056
49L:L:?1 R:R:L229 28.79633.78YesYes104
50R:R:F332 R:R:W336 74.37497.02NoYes198
51R:R:F332 R:R:M250 1009.95NoNo098
52R:R:M250 R:R:S170 97.63643.07NoNo089
53R:R:S170 R:R:T253 95.26374.8NoNo095
54R:R:L171 R:R:T253 21.49572.95NoNo065
55R:R:I249 R:R:L171 18.84012.85NoNo066
56R:R:I245 R:R:I249 13.50162.94NoNo056
57R:R:I245 R:R:P246 10.81865.08NoNo059
58R:R:F243 R:R:F340 28.536228.94NoYes187
59R:R:F243 R:R:F332 27.9755.36NoNo189
60R:R:F112 R:R:K195 11.0332.48YesNo086
61R:R:T253 R:R:Y174 73.49882.5NoYes058
62R:R:Q178 R:R:Y174 16.175411.27NoYes068
63R:R:T257 R:R:Y174 48.44864.99NoYes098
64R:R:I177 R:R:T257 43.7264.56NoNo099
65R:R:I177 R:R:L261 41.13895.71NoYes098
66R:R:N179 R:R:Q178 10.81862.64NoNo066
67R:R:F234 R:R:L229 14.55564.87YesYes174
68R:R:L229 R:R:V235 11.68552.98YesNo046
69R:R:C322 R:R:L261 26.35974.76NoYes078
70R:R:C322 R:R:I258 21.06223.27NoNo075
71R:R:I258 R:R:Y254 18.41129.67NoNo059
72R:R:F329 R:R:Y254 13.483318.57YesNo089
73R:R:E318 R:R:L261 10.38512.65NoYes088
74R:R:F339 R:R:L362 12.16923.65YesNo073
75R:R:L362 R:R:T342 10.29842.95NoNo035
76R:R:F391 R:R:L382 13.04533.65NoNo065
77R:R:I152 R:R:W151 10.37143.52NoYes155
78R:R:V127 R:R:W151 33.00337.36YesYes185
79R:R:V127 R:R:Y370 12.13733.79YesYes187
80R:R:S373 R:R:T88 13.18676.4NoYes097
81R:R:D120 R:R:N92 18.99534.04YesYes699
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:?1 R:R:D155 5.93 1 Yes Yes 0 8 0 1
L:L:?1 R:R:V156 7.33 1 Yes No 0 6 0 1
L:L:?1 R:R:S159 6.56 1 Yes No 0 7 0 1
L:L:?1 R:R:L229 3.78 1 Yes Yes 0 4 0 1
L:L:?1 R:R:S242 3.28 1 Yes No 0 6 0 1
L:L:?1 R:R:F339 6.65 1 Yes Yes 0 7 0 1
L:L:?1 R:R:F340 4.66 1 Yes Yes 0 7 0 1
R:R:V127 R:R:W151 7.36 1 Yes Yes 8 5 2 2
R:R:D155 R:R:V127 7.3 1 Yes Yes 8 8 1 2
R:R:V127 R:R:Y370 3.79 1 Yes Yes 8 7 2 2
R:R:I152 R:R:W151 3.52 1 No Yes 5 5 2 2
R:R:D155 R:R:W151 3.35 1 Yes Yes 8 5 1 2
R:R:I152 R:R:I210 4.42 1 No Yes 5 6 2 2
R:R:I152 R:R:L229 2.85 1 No Yes 5 4 2 1
R:R:D155 R:R:Y370 9.2 1 Yes Yes 8 7 1 2
R:R:I210 R:R:V156 4.61 1 Yes No 6 6 2 1
R:R:I210 R:R:L229 4.28 1 Yes Yes 6 4 2 1
R:R:F234 R:R:I210 5.02 1 Yes Yes 7 6 2 2
R:R:F234 R:R:L229 4.87 1 Yes Yes 7 4 2 1
R:R:L229 R:R:V235 2.98 1 Yes No 4 6 1 2
R:R:F340 R:R:S239 7.93 1 Yes No 7 6 1 2
R:R:F243 R:R:W336 3.01 1 No Yes 8 8 2 2
R:R:F243 R:R:F340 28.94 1 No Yes 8 7 2 1
R:R:F339 R:R:W336 3.01 1 Yes Yes 7 8 1 2
R:R:F340 R:R:W336 4.01 1 Yes Yes 7 8 1 2
R:R:F339 R:R:F340 11.79 1 Yes Yes 7 7 1 1
R:R:F339 R:R:L362 3.65 1 Yes No 7 3 1 2
R:R:F339 R:R:V366 6.55 1 Yes No 7 6 1 2

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 9AS6_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 2.85
Number of Linked Nodes 245
Number of Links 266
Number of Hubs 36
Number of Links mediated by Hubs 136
Number of Communities 8
Number of Nodes involved in Communities 42
Number of Links involved in Communities 54
Path Summary
Number Of Nodes in MetaPath 82
Number Of Links MetaPath 81
Number of Shortest Paths 51675
Length Of Smallest Path 3
Average Path Length 14.9987
Length of Longest Path 37
Minimum Path Strength 1.295
Average Path Strength 5.60966
Maximum Path Strength 20.365
Minimum Path Correlation 0.7
Average Path Correlation 0.915698
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 3.33333
Average % Of Corr. Nodes 38.224
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 46.3348
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier• G protein-coupled receptor-like   • Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• G protein-coupled receptor-like   • Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeA1A
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodeA1A
Name6-AMINO HEXANOIC ACID
Synonyms
Identifier
FormulaC33 H40 N4 O6
Molecular Weight588.694
SMILES
PubChem5327090
Formal Charge0
Total Atoms83
Total Chiral Atoms4
Total Bonds86
Total Aromatic Bonds18

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP28223
Sequence
>9AS6_nogp_Chain_R
LLTAVVIIL TIAGNILVI MAVSLEKKL QNATNYFLM SLAIADMLL 
GFLVMPVSM LTILYGYRW PLPSKLCAV WIYLDVLFS TASIMHLCA 
ISLDRYVAI QNPIHHSRF NSRTKAFLK IIAVWTISV GISMPIPVF 
GLQDDSKVF KEGSCLLAD DNFVLIGSF VSFFIPLTI MVITYFLTI 
KSLQKEISN EQKACKVLG IVFFLFVVM WCPFFITNI MAVICNEDV 
IGALLNVFV WIGYLSSAV NPLVYTLFN KTYRSAFSR YI


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
6WGTAAmine5-Hydroxytryptamine5-HT2AHomo sapiensLSD--3.42020-09-23doi.org/10.1016/j.cell.2020.08.024
6WH4AAmine5-Hydroxytryptamine5-HT2AHomo sapiensMethiothepin--3.42020-09-23doi.org/10.1016/j.cell.2020.08.024
6WHAAAmine5-Hydroxytryptamine5-HT2AHomo sapiensDB13948-chim(NtGi2L-Gs-CtGq)/β1/γ23.362020-09-23doi.org/10.1016/j.cell.2020.08.024
6WHA (No Gprot) AAmine5-Hydroxytryptamine5-HT2AHomo sapiensDB13948-3.362020-09-23doi.org/10.1016/j.cell.2020.08.024
8ZMGAAmine5-Hydroxytryptamine5-HT2AHomo sapiensPimavanserin--3.42024-08-28doi.org/10.1021/acs.jmedchem.4c01244
7RANAAmine5-Hydroxytryptamine5-HT2AHomo sapiensPubChem 164575847-chim(NtGi2L-Gs-CtGq)/β1/γ23.452022-07-06doi.org/10.1038/s41586-022-05258-z
7RAN (No Gprot) AAmine5-Hydroxytryptamine5-HT2AHomo sapiensPubChem 164575847-3.452022-07-06doi.org/10.1038/s41586-022-05258-z
7VODAAmine5-Hydroxytryptamine5-HT2AHomo sapiensCariprazine--3.32021-12-22doi.org/10.1038/s41593-021-00971-w
7VOEAAmine5-Hydroxytryptamine5-HT2AHomo sapiensAripiprazole--2.92021-12-22doi.org/10.1038/s41593-021-00971-w
6A93AAmine5-Hydroxytryptamine5-HT2AHomo sapiensRisperidone--32019-02-13doi.org/10.1038/s41594-018-0180-z
6A94AAmine5-Hydroxytryptamine5-HT2AHomo sapiensZotepine--2.92019-02-13doi.org/10.1038/s41594-018-0180-z
7WC4AAmine5-Hydroxytryptamine5-HT2AHomo sapiensSerotonin--3.22022-01-26doi.org/10.1126/science.abl8615
7WC5AAmine5-Hydroxytryptamine5-HT2AHomo sapiensPsilocin--3.22022-01-26doi.org/10.1126/science.abl8615
7WC6AAmine5-Hydroxytryptamine5-HT2AHomo sapiensLSD--2.62022-01-26doi.org/10.1126/science.abl8615
7WC7AAmine5-Hydroxytryptamine5-HT2AHomo sapiensLisuride--2.62022-01-26doi.org/10.1126/science.abl8615
7WC8AAmine5-Hydroxytryptamine5-HT2AHomo sapiensLumateperone--2.452022-01-26doi.org/10.1126/science.abl8615
7WC9AAmine5-Hydroxytryptamine5-HT2AHomo sapiensPubChem 162421364--2.52022-01-26doi.org/10.1126/science.abl8615
8UWLAAmine5-Hydroxytryptamine5-HT2AHomo sapiensLisuride-chim(NtGi2-Gs-CtGq)/β1/γ22.82024-05-29doi.org/10.1126/science.adn6354
8UWL (No Gprot) AAmine5-Hydroxytryptamine5-HT2AHomo sapiensLisuride-2.82024-05-29doi.org/10.1126/science.adn6354
8V6UAAmine5-Hydroxytryptamine5-HT2AHomo sapiensPubChem 171392456-chim(NtGi2-Gs-CtGq)/β1/γ232024-05-29doi.org/10.1126/science.adn6354
8V6U (No Gprot) AAmine5-Hydroxytryptamine5-HT2AHomo sapiensPubChem 171392456-32024-05-29doi.org/10.1126/science.adn6354
8JT8AAmine5-Hydroxytryptamine5-HT2AHomo sapiens(R)-IHCH-7179--2.72024-02-28doi.org/10.1016/j.cell.2024.02.034
9ARXAAmine5-Hydroxytryptamine5-HT2AHomo sapiensSerotonin--3.242025-04-02doi.org/10.1038/s41467-025-57956-7
9ARYAAmine5-Hydroxytryptamine5-HT2AHomo sapiensSerotonin-chim(NtGi1-Gs-CtGq)/β1/γ23.272025-04-02doi.org/10.1038/s41467-025-57956-7
9ARY (No Gprot) AAmine5-Hydroxytryptamine5-HT2AHomo sapiensSerotonin-3.272025-04-02doi.org/10.1038/s41467-025-57956-7
9ARZAAmine5-Hydroxytryptamine5-HT2AHomo sapiens2-bromo-LSD--3.372025-04-02doi.org/10.1038/s41467-025-57956-7
9AS0AAmine5-Hydroxytryptamine5-HT2AHomo sapiens2-bromo-LSD-chim(NtGi1-Gs-CtGq)/β1/γ23.382025-04-02doi.org/10.1038/s41467-025-57956-7
9AS0 (No Gprot) AAmine5-Hydroxytryptamine5-HT2AHomo sapiens2-bromo-LSD-3.382025-04-02doi.org/10.1038/s41467-025-57956-7
9AS1AAmine5-Hydroxytryptamine5-HT2AHomo sapiensDMT--3.382025-04-02doi.org/10.1038/s41467-025-57956-7
9AS2AAmine5-Hydroxytryptamine5-HT2AHomo sapiensDMT-chim(NtGi1-Gs-CtGq)/β1/γ23.212025-04-02doi.org/10.1038/s41467-025-57956-7
9AS2 (No Gprot) AAmine5-Hydroxytryptamine5-HT2AHomo sapiensDMT-3.212025-04-02doi.org/10.1038/s41467-025-57956-7
9AS3AAmine5-Hydroxytryptamine5-HT2AHomo sapiensLSD--3.182025-04-02doi.org/10.1038/s41467-025-57956-7
9AS4AAmine5-Hydroxytryptamine5-HT2AHomo sapiensLSD-chim(NtGi1-Gs-CtGq)/β1/γ23.062025-04-02doi.org/10.1038/s41467-025-57956-7
9AS4 (No Gprot) AAmine5-Hydroxytryptamine5-HT2AHomo sapiensLSD-3.062025-04-02doi.org/10.1038/s41467-025-57956-7
9AS5AAmine5-Hydroxytryptamine5-HT2AHomo sapiensMescaline--3.342025-04-02doi.org/10.1038/s41467-025-57956-7
9AS6AAmine5-Hydroxytryptamine5-HT2AHomo sapiensMescaline-chim(NtGi1-Gs-CtGq)/β1/γ23.072025-04-02doi.org/10.1038/s41467-025-57956-7
9AS6 (No Gprot) AAmine5-Hydroxytryptamine5-HT2AHomo sapiensMescaline-3.072025-04-02doi.org/10.1038/s41467-025-57956-7
9AS7AAmine5-Hydroxytryptamine5-HT2AHomo sapiensPsilocin--2.722025-04-02doi.org/10.1038/s41467-025-57956-7
9AS9AAmine5-Hydroxytryptamine5-HT2AHomo sapiensRS130-180--3.472025-04-02doi.org/10.1038/s41467-025-57956-7
9ASAAAmine5-Hydroxytryptamine5-HT2AHomo sapiensRS130-180-chim(NtGi1-Gs-CtGq)/β1/γ23.122025-04-02doi.org/10.1038/s41467-025-57956-7
9ASA (No Gprot) AAmine5-Hydroxytryptamine5-HT2AHomo sapiensRS130-180-3.122025-04-02doi.org/10.1038/s41467-025-57956-7




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