Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:?1 6.831431410
2R:R:F5 8.2625414
3R:R:Y6 8.89516
4R:R:R7 8.18534
5R:R:E15 5.6433
6R:R:L41 5.5175449
7R:R:V60 3.56457
8R:R:Y62 6.225447
9R:R:L68 5.734529
10R:R:D72 7.5825429
11R:R:K76 6.49418
12R:R:L96 2.47464
13R:R:F108 5.076506
14R:R:M112 5.4075418
15R:R:F115 6.3525408
16R:R:L117 4.685418
17R:R:W131 4.0825476
18R:R:H136 3.3325474
19R:R:Y140 10.205458
20R:R:F163 4.35333617
21R:R:F174 5.918506
22R:R:V175 6.6525414
23R:R:Q176 6.055405
24R:R:Y177 8.57833619
25R:R:T181 6.006519
26R:R:W182 7.67167619
27R:R:F184 5.604518
28R:R:I185 6.274517
29R:R:Q186 5.91415
30R:R:M187 4.4075417
31R:R:V188 5.25513
32R:R:H189 5.478514
33R:R:V196 6.9875415
34R:R:Y199 6.59286716
35R:R:Y203 4.76833618
36R:R:L258 7406
37R:R:F274 6.2489
38R:R:Y287 9.435404
39R:R:V293 5.0625411
40R:R:L309 5.32417
41R:R:D319 4.90333629
42R:R:W321 7.8025408
43R:R:F323 4.9475429
44R:R:I324 4.96449
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:V175 R:R:Y177 19.66713.79YesYes149
2R:R:W182 R:R:Y177 49.153517.36YesYes199
3L:L:?1 R:R:W182 78.23728.99YesYes109
4L:L:?1 R:R:K76 10012.06YesYes108
5L:L:?1 R:R:S80 11.401810.86YesNo008
6R:R:F184 R:R:Y177 18.48745.16YesYes189
7R:R:F184 R:R:M112 28.02156.22YesYes188
8L:L:?1 R:R:T181 23.50934.85YesYes109
9R:R:F5 R:R:Y6 10.321811.35YesYes146
10R:R:V188 R:R:Y6 10.84935.05YesYes136
11R:R:Q186 R:R:V175 15.53275.73YesYes154
12R:R:P179 R:R:T181 17.28275.25NoYes089
13R:R:E15 R:R:P179 13.49753.14YesNo038
14R:R:K76 R:R:S316 97.61914.59YesNo088
15R:R:D72 R:R:S316 97.23068.83YesNo098
16R:R:D72 R:R:N34 83.27696.73YesNo099
17R:R:N34 R:R:P320 82.442911.4NoNo099
18R:R:P320 R:R:W321 81.60172.7NoYes098
19R:R:I325 R:R:W321 77.349715.27NoYes088
20R:R:A37 R:R:I325 75.57473.25NoNo098
21R:R:A37 R:R:I324 74.67666.5NoYes099
22R:R:I324 R:R:V65 58.22433.07YesNo498
23R:R:F61 R:R:V65 59.37917.87NoNo098
24R:R:F61 R:R:R327 57.31554.28NoNo099
25R:R:L258 R:R:R327 55.31242.43YesNo069
26R:R:L258 R:R:R332 15.83569.72YesNo066
27R:R:I324 R:R:L41 13.69715.71YesYes499
28R:R:D72 R:R:L68 28.83426.79YesYes299
29R:R:L68 R:R:M126 20.62595.65YesNo099
30R:R:L64 R:R:M126 19.54595.65NoNo089
31R:R:L64 R:R:V152 10.56784.47NoNo085
32R:R:L68 R:R:Q122 16.38096.65YesNo097
33R:R:D319 R:R:D72 18.13817.98YesYes299
34R:R:F168 R:R:F174 13.70784.29NoYes046
35R:R:F110 R:R:F168 11.96858.57NoNo074
36R:R:F110 R:R:F111 10.22928.57NoNo075
37R:R:F108 R:R:W182 16.59843.01YesYes069
38R:R:F108 R:R:V82 17.31835.24YesNo066
39R:R:F184 R:R:I185 73.42917.54YesYes187
40R:R:I185 R:R:Y203 34.0458.46YesYes178
41R:R:L117 R:R:Y203 10.9674.69YesYes188
42R:R:I185 R:R:Y199 18.29497.25YesYes176
43R:R:M207 R:R:Y203 23.523.59NoYes078
44R:R:M207 R:R:T120 23.15646.02NoNo077
45R:R:L210 R:R:T120 14.09994.42NoNo067
46R:R:L121 R:R:L210 13.6334.15NoNo056
47R:R:Q122 R:R:V156 14.054.3NoNo076
48R:R:L121 R:R:V156 13.57244.47NoNo056
49R:R:F274 R:R:T120 25.94362.59YesNo097
50R:R:F274 R:R:T214 22.233310.38YesNo098
51R:R:L124 R:R:T214 20.98235.9NoNo058
52R:R:H263 R:R:L258 39.02417.71NoYes086
53R:R:H263 R:R:L225 37.86932.57NoNo089
54R:R:L134 R:R:L225 25.41614.15NoNo089
55R:R:C130 R:R:L134 10.57131.59NoNo098
56R:R:L267 R:R:N218 13.00574.12NoNo099
57R:R:L225 R:R:L264 11.55154.15NoNo097
58R:R:L264 R:R:M222 10.26847.07NoNo077
59R:R:L124 R:R:L128 18.45892.77NoNo057
60R:R:C217 R:R:L128 17.18643.17NoNo077
61R:R:C217 R:R:W131 15.90692.61NoYes076
62R:R:Q186 R:R:V196 28.03935.73YesYes155
63R:R:D305 R:R:Y177 13.87538.05NoYes179
64R:R:H189 R:R:V196 22.10869.69YesYes145
65R:R:H189 R:R:L197 16.22063.86YesNo044
66R:R:A289 R:R:L197 14.21751.58NoNo074
67R:R:A289 R:R:F290 10.194.16NoNo073
68R:R:L134 R:R:M228 14.48842.83NoNo088
69R:R:E260 R:R:M228 10.61776.77NoNo098
70R:R:D305 R:R:R284 13.112613.1NoNo075
71R:R:F174 R:R:I185 22.8255.02YesYes067
72R:R:Y177 R:R:Y6 33.8819.93YesYes196
73L:L:?1 R:R:M112 34.69377.44YesYes108
74R:R:F108 R:R:M112 12.34993.73YesYes068
75R:R:F184 R:R:W182 28.4353.01YesYes189
76R:R:Q186 R:R:Y6 16.27056.76YesYes156
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:?1 R:R:L26 3.64 1 Yes No 0 8 0 1
L:L:?1 R:R:K76 12.06 1 Yes Yes 0 8 0 1
L:L:?1 R:R:S80 10.86 1 Yes No 0 8 0 1
L:L:?1 R:R:V83 7.84 1 Yes No 0 9 0 1
L:L:?1 R:R:Y87 6.94 1 Yes No 0 8 0 1
L:L:?1 R:R:M112 7.44 1 Yes Yes 0 8 0 1
L:L:?1 R:R:T181 4.85 1 Yes Yes 0 9 0 1
L:L:?1 R:R:W182 8.99 1 Yes Yes 0 9 0 1
L:L:?1 R:R:L306 4.55 1 Yes No 0 7 0 1
L:L:?1 R:R:R310 5.59 1 Yes No 0 9 0 1
L:L:?1 R:R:L312 4.55 1 Yes No 0 8 0 1
L:L:?1 R:R:S313 13.83 1 Yes No 0 9 0 1
R:R:A20 R:R:Y87 6.67 0 No No 6 8 2 1
R:R:M22 R:R:R310 11.17 0 No No 3 9 2 1
R:R:F27 R:R:S80 11.89 0 No No 8 8 2 1
R:R:G30 R:R:K76 3.49 1 No Yes 9 8 2 1
R:R:G30 R:R:I317 5.29 1 No No 9 9 2 2
R:R:K76 R:R:S316 4.59 1 Yes No 8 8 1 2
R:R:I317 R:R:K76 5.82 1 No Yes 9 8 2 1
R:R:A86 R:R:T181 3.36 0 No Yes 6 9 2 1
R:R:T181 R:R:Y87 14.98 1 Yes No 9 8 1 1
R:R:F108 R:R:M112 3.73 0 Yes Yes 6 8 2 1
R:R:F108 R:R:W182 3.01 0 Yes Yes 6 9 2 1
R:R:F184 R:R:M112 6.22 1 Yes Yes 8 8 2 1
R:R:L309 R:R:M112 4.24 1 Yes Yes 7 8 2 1
R:R:W182 R:R:Y177 17.36 1 Yes Yes 9 9 1 2
R:R:F184 R:R:Y177 5.16 1 Yes Yes 8 9 2 2
R:R:P179 R:R:T181 5.25 0 No Yes 8 9 2 1
R:R:F184 R:R:W182 3.01 1 Yes Yes 8 9 2 1
R:R:L306 R:R:W182 5.69 1 No Yes 7 9 1 1
R:R:L309 R:R:W182 7.97 1 Yes Yes 7 9 2 1
R:R:F184 R:R:L309 6.09 1 Yes Yes 8 7 2 2
R:R:L309 R:R:V281 2.98 1 Yes No 7 8 2 2
R:R:L312 R:R:V281 2.98 0 No No 8 8 1 2
R:R:L306 R:R:R310 12.15 1 No No 7 9 1 1
L:L:?1 R:R:G23 2.25 1 Yes No 0 8 0 1
L:L:?1 R:R:G116 2.25 1 Yes No 0 8 0 1
R:R:G23 R:R:G24 2.11 0 No No 8 4 1 2
R:R:P81 R:R:S80 1.78 0 No No 8 8 2 1
R:R:T181 R:R:V14 1.59 1 Yes No 9 4 1 2

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 9E9S_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 2.98
Number of Linked Nodes 288
Number of Links 332
Number of Hubs 44
Number of Links mediated by Hubs 165
Number of Communities 8
Number of Nodes involved in Communities 65
Number of Links involved in Communities 92
Path Summary
Number Of Nodes in MetaPath 77
Number Of Links MetaPath 76
Number of Shortest Paths 62656
Length Of Smallest Path 3
Average Path Length 14.6915
Length of Longest Path 37
Minimum Path Strength 1.45
Average Path Strength 6.3779
Maximum Path Strength 18.32
Minimum Path Correlation 0.7
Average Path Correlation 0.91972
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 3.84615
Average % Of Corr. Nodes 46.1993
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 47.0433
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function• binding   • guanyl nucleotide binding   • GTP binding   • nucleotide binding   • guanyl ribonucleotide binding   • purine ribonucleotide binding   • purine ribonucleoside triphosphate binding   • nucleoside phosphate binding   • ion binding   • purine nucleotide binding   • anion binding   • heterocyclic compound binding   • carbohydrate derivative binding   • ribonucleotide binding   • small molecule binding   • D1 dopamine receptor binding   • protein binding   • signaling receptor binding   • G protein-coupled receptor binding   • dopamine receptor binding   • protein-containing complex binding   • G-protein beta/gamma-subunit complex binding   • pyrophosphatase activity   • GTPase activity   • G protein activity   • ribonucleoside triphosphate phosphatase activity   • molecular function regulator activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • enzyme regulator activity   • cyclase regulator activity   • enzyme activator activity   • cyclase activator activity   • molecular function activator activity   • adenylate cyclase regulator activity   • adenylate cyclase activator activity   • cation binding   • metal ion binding   • developmental process   • multicellular organismal process   • epithelium development   • ectodermal placode morphogenesis   • epidermis development   • molting cycle process   • hair cycle   • animal organ development   • hair follicle placode formation   • tissue development   • ectodermal placode formation   • anatomical structure morphogenesis   • skin development   • skin epidermis development   • hair follicle development
Gene OntologyBiological Process• developmental process   • multicellular organismal process   • epithelium development   • ectodermal placode morphogenesis   • epidermis development   • molting cycle process   • hair cycle   • animal organ development   • hair follicle placode formation   • tissue development   • ectodermal placode formation   • anatomical structure morphogenesis   • skin development   • skin epidermis development   • hair follicle development   • molting cycle   • anatomical structure development   • anatomical structure formation involved in morphogenesis   • ectodermal placode development   • hair cycle process   • cellular homeostasis   • chemical homeostasis   • homeostatic process   • glucose homeostasis   • carbohydrate homeostasis   • intracellular chemical homeostasis   • intracellular glucose homeostasis   • system process   • regulation of biological process   • nervous system process   • neuromuscular process   • regulation of system process   • biological regulation   • skeletal muscle contraction   • muscle contraction   • muscle system process   • regulation of muscle system process   • striated muscle contraction   • multicellular organismal movement   • musculoskeletal movement   • regulation of striated muscle contraction   • regulation of muscle contraction   • regulation of skeletal muscle contraction   • regulation of multicellular organismal process   • sensory perception of chemical stimulus   • sensory perception   • sensory perception of smell   • cellular response to stimulus   • cellular response to nitrogen compound   • response to stimulus   • response to endogenous stimulus   • response to peptide hormone   • cellular response to peptide hormone stimulus   • response to oxygen-containing compound   • response to nitrogen compound   • response to glucagon   • cellular response to oxygen-containing compound   • cellular response to glucagon stimulus   • cellular response to endogenous stimulus   • cellular response to chemical stimulus   • response to hormone   • response to chemical   • cellular process   • cellular response to hormone stimulus   • multicellular organism development   • skeletal system development   • bone development   • system development   • response to pH   • cellular response to pH   • response to abiotic stimulus   • cellular response to acidic pH   • response to acidic pH   • cellular response to abiotic stimulus   • cellular response to environmental stimulus   • regulation of body fluid levels   • wound healing   • homotypic cell-cell adhesion   • cell activation   • hemostasis   • platelet aggregation   • blood coagulation   • cell adhesion   • cell-cell adhesion   • response to stress   • coagulation   • regulation of biological quality   • response to wounding   • platelet activation   • response to fluid shear stress   • vascular endothelial cell response to laminar fluid shear stress   • response to laminar fluid shear stress   • cellular response to stress   • cellular response to laminar fluid shear stress   • vascular endothelial cell response to fluid shear stress   • cellular response to fluid shear stress   • cognition   • developmental growth   • growth   • response to ketone   • response to prostaglandin   • response to lipid   • response to alcohol   • cellular response to prostaglandin stimulus   • cellular response to prostaglandin E stimulus   • cellular response to alcohol   • cellular response to lipid   • response to prostaglandin E   • cellular response to ketone   • regulation of cellular process   • signaling   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cell communication   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • signal transduction   • positive regulation of biological process   • adaptive thermogenesis   • multicellular organismal-level homeostasis   • regulation of cold-induced thermogenesis   • cold-induced thermogenesis   • temperature homeostasis   • positive regulation of cold-induced thermogenesis   • positive regulation of multicellular organismal process   • positive regulation of cell communication   • regulation of localization   • establishment of protein localization   • nitrogen compound transport   • positive regulation of establishment of protein localization   • localization   • establishment of localization in cell   • positive regulation of insulin secretion involved in cellular response to glucose stimulus   • positive regulation of insulin secretion   • intracellular protein localization   • regulation of peptide hormone secretion   • regulation of hormone levels   • positive regulation of peptide hormone secretion   • establishment of protein localization to extracellular region   • protein secretion   • establishment of localization   • regulation of protein secretion   • regulation of secretion   • cellular response to carbohydrate stimulus   • response to glucose   • positive regulation of protein localization   • insulin secretion involved in cellular response to glucose stimulus   • cellular localization   • regulation of hormone secretion   • regulation of protein localization   • regulation of peptide secretion   • transport   • positive regulation of secretion by cell   • hormone secretion   • protein localization to extracellular region   • positive regulation of protein transport   • peptide secretion   • regulation of secretion by cell   • secretion by cell   • positive regulation of hormone secretion   • response to monosaccharide   • response to carbohydrate   • positive regulation of secretion   • signal release   • cellular response to hexose stimulus   • cellular response to monosaccharide stimulus   • positive regulation of cellular process   • positive regulation of peptide secretion   • regulation of signaling   • regulation of transport   • secretion   • regulation of peptide transport   • regulation of establishment of protein localization   • export from cell   • cell-cell signaling   • cellular response to glucose stimulus   • regulation of protein transport   • positive regulation of protein secretion   • peptide transport   • response to hexose   • positive regulation of transport   • regulation of cellular localization   • protein transport   • regulation of insulin secretion   • peptide hormone secretion   • macromolecule localization   • regulation of insulin secretion involved in cellular response to glucose stimulus   • hormone transport   • regulation of cell communication   • insulin secretion   • positive regulation of signaling   • adenylate cyclase-activating adrenergic receptor signaling pathway   • adrenergic receptor signaling pathway   • response to dopamine   • cellular response to dopamine   • response to monoamine   • response to catecholamine   • cellular response to catecholamine stimulus   • serotonin receptor signaling pathway   • cellular response to monoamine stimulus   • adenylate cyclase-activating serotonin receptor signaling pathway   • intracellular transport   • regulation of defense response   • regulation of response to external stimulus   • negative regulation of inflammatory response   • negative regulation of biological process   • inflammatory response to antigenic stimulus   • regulation of response to stress   • regulation of immune system process   • negative regulation of inflammatory response to antigenic stimulus   • defense response   • immune response   • negative regulation of response to stimulus   • negative regulation of immune response   • regulation of inflammatory response to antigenic stimulus   • response to external stimulus   • regulation of inflammatory response   • regulation of response to stimulus   • negative regulation of immune system process   • immune system process   • negative regulation of response to external stimulus   • negative regulation of defense response   • regulation of immune response   • inflammatory response   • positive regulation of adenylate cyclase activity   • positive regulation of molecular function   • regulation of molecular function   • positive regulation of cyclase activity   • activation of adenylate cyclase activity   • regulation of adenylate cyclase activity   • regulation of catalytic activity   • positive regulation of catalytic activity   • positive regulation of lyase activity   • adenylate cyclase-activating dopamine receptor signaling pathway   • G protein-coupled dopamine receptor signaling pathway   • cell surface receptor signaling pathway   • bile acid signaling pathway   • adenylate cyclase-activating G protein-coupled bile acid receptor signaling pathway   • renal system process   • multicellular organismal-level water homeostasis   • multicellular organismal-level chemical homeostasis   • renal water homeostasis   • cellular anatomical structure   • membrane   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • plasma membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cell periphery   • cytoplasmic side of plasma membrane   • GTPase complex
Gene OntologyCellular Component• cellular anatomical structure   • membrane   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • plasma membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cell periphery   • cytoplasmic side of plasma membrane   • GTPase complex   • extrinsic component of membrane   • extrinsic component of cytoplasmic side of plasma membrane   • extracellular exosome   • membrane-bounded organelle   • extracellular vesicle   • extracellular organelle   • extracellular region   • organelle   • extracellular space   • vesicle   • extracellular membrane-bounded organelle   • intracellular anatomical structure   • cytoplasm   • cytosol   • Golgi apparatus subcompartment   • Golgi apparatus   • organelle subcompartment   • trans-Golgi network membrane   • intracellular membrane-bounded organelle   • endomembrane system   • intracellular organelle   • trans-Golgi network   • organelle membrane   • protein binding   • binding   • G-protein beta-subunit binding   • fibroblast proliferation   • cell population proliferation   • cellular process   • cellular response to nitrogen compound   • cellular response to stimulus   • response to dopamine   • regulation of cellular process   • response to stimulus   • signaling   • cellular response to dopamine   • response to monoamine   • cell communication   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • signal transduction   • regulation of biological process   • G protein-coupled dopamine receptor signaling pathway   • biological regulation   • response to oxygen-containing compound   • response to nitrogen compound   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cellular response to oxygen-containing compound   • cellular response to chemical stimulus   • cellular response to monoamine stimulus   • response to chemical   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • response to ketone   • response to prostaglandin   • response to lipid   • response to endogenous stimulus   • response to alcohol   • cellular response to prostaglandin stimulus   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to alcohol   • response to hormone   • cellular response to lipid   • response to prostaglandin E   • cellular response to ketone   • cellular response to hormone stimulus   • synapse   • cell junction   • prostanoid receptor activity   • molecular transducer activity   • G protein-coupled receptor activity   • transmembrane signaling receptor activity   • signaling receptor activity   • icosanoid receptor activity   • prostaglandin D receptor activity   • prostaglandin receptor activity   • prostaglandin J receptor activity   • multicellular organismal process   • sleep   • positive regulation of cytosolic calcium ion concentration   • regulation of biological quality   • establishment of organelle localization   • regulated exocytosis   • cellular localization   • transport   • cell activation involved in immune response   • leukocyte degranulation   • myeloid leukocyte activation   • myeloid leukocyte mediated immunity   • vesicle-mediated transport   • leukocyte activation   • localization   • secretion by cell   • organelle localization   • leukocyte activation involved in immune response   • establishment of localization in cell   • mast cell activation   • leukocyte mediated immunity   • mast cell mediated immunity   • immune response   • secretion   • cell activation   • vacuolar localization   • export from cell   • mast cell degranulation   • establishment of localization   • myeloid cell activation involved in immune response   • immune effector process   • mast cell activation involved in immune response   • exocytosis   • immune system process   • lysosome localization   • developmental process   • multicellular organism development   • sex determination   • male sex determination   • reproductive process   • anatomical structure development   • developmental process involved in reproduction   • defense response   • response to stress   • inflammatory response   • cellular response to prostaglandin D stimulus   • response to prostaglandin D   • carbohydrate derivative metabolic process   • primary metabolic process   • nucleoside metabolic process   • purine-containing compound metabolic process   • nucleobase-containing compound metabolic process   • adenosine metabolic process   • nucleobase-containing small molecule metabolic process   • metabolic process   • small molecule metabolic process   • purine nucleoside metabolic process   • ribonucleoside metabolic process   • purine ribonucleoside metabolic process   • enzyme binding   • GTPase binding   • protein-containing complex binding   • pyrophosphatase activity   • GTPase activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • signaling receptor complex adaptor activity   • protein-macromolecule adaptor activity   • molecular adaptor activity   • signaling adaptor activity   • system process   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of taste   • sensory organ development   • eye development   • animal organ development   • retina development in camera-type eye   • visual system development   • camera-type eye development   • sensory system development   • system development   • small GTPase-mediated signal transduction   • Ras protein signal transduction   • intracellular signal transduction   • intracellular signaling cassette   • phospholipase C-activating G protein-coupled receptor signaling pathway   • synaptic signaling   • cellular response to acetylcholine   • cell-cell signaling   • acetylcholine receptor signaling pathway   • postsynaptic signal transduction   • G protein-coupled acetylcholine receptor signaling pathway   • response to acetylcholine   • non-motile cilium   • 9+0 non-motile cilium   • cilium   • neuron projection   • photoreceptor disc membrane   • photoreceptor outer segment   • plasma membrane bounded cell projection   • cell projection   • photoreceptor cell cilium   • vacuolar membrane   • lytic vacuole   • vacuole   • lytic vacuole membrane   • bounding membrane of organelle   • lysosomal membrane   • lysosome
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeNAG
PDB ResiduesH:H:?1
Environment DetailsOpen EMBL-EBI Page
CodeNAG
NameN-Acetylglucosamine
SynonymsN-Acetylchitosamine
Identifier
FormulaC8 H15 N O6
Molecular Weight221.208
SMILES
PubChem24139
Formal Charge0
Total Atoms30
Total Chiral Atoms5
Total Bonds30
Total Aromatic Bonds0

CodePG2
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodePG2
NameProstaglandin D2
Synonyms(5E,13E)-9,15-DIHYDROXY-11-OXOPROSTA-5,13-DIEN-1-OIC ACID
Identifier
FormulaC20 H32 O5
Molecular Weight352.465
SMILES
PubChem448457
Formal Charge0
Total Atoms57
Total Chiral Atoms4
Total Bonds57
Total Aromatic Bonds0

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtQ13258
Sequence
>9E9S_nogp_Chain_R
SPFYRCQNT TSVEKGNSA VMGGVLFST GLLGNLLAL GLLARSGLG 
PSVFYMLVC GLTVTDLLG KCLLSPVVL AAYAQNRSL RVLAPALDN 
SLCQAFAFF MSFFGLSST LQLLAMALE CWLSLGHPF FYRRHITLR 
LGALVAPVV SAFSLAFCA LPFMGFGKF VQYCPGTWC FIQMVHEEG 
SLSVLGYSV LYSSLMALL VLATVLCNL GAMRNLYAM HRRLQRHPQ 
PLEELDHLL LLALMTVLF TMCSLPVIY RAYYGAFKD VKEKNRTSE 
EAEDLRALR FLSVISIVD PWIFIIFRS PVFRIFFHK I


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
9E9SALipidProstanoidDP1Homo sapiensPGD2-Gs/β1/γ12.682025-09-03To be published
9E9S (No Gprot) ALipidProstanoidDP1Homo sapiensPGD2-2.682025-09-03To be published
9EE5ALipidProstanoidDP1Homo sapiensONO-2550289--2.892025-09-03doi.org/10.1038/s41467-025-64002-z
9EI5ALipidProstanoidDP1Homo sapiens---2.842025-09-03doi.org/10.1038/s41467-025-64002-z
9EKHALipidProstanoidDP1Homo sapiensONO-3030297--2.892025-09-03doi.org/10.1038/s41467-025-64002-z
9UWDALipidProstaglandinDP1Homo sapiens----2025-04-09doi.org/10.1073/pnas.2501902122
8ZVZALipidProstaglandinDP1Homo sapiensBW245C-Gs/β1/γ22.352025-05-28doi.org/10.1073/pnas.2501902122
8ZVZ (No Gprot) ALipidProstaglandinDP1Homo sapiensBW245C-2.352025-05-28doi.org/10.1073/pnas.2501902122
8ZW0ALipidProstaglandinDP1Homo sapiensPGD2-Gs/β1/γ22.722025-05-28doi.org/10.1073/pnas.2501902122
8ZW0 (No Gprot) ALipidProstaglandinDP1Homo sapiensPGD2-2.722025-05-28doi.org/10.1073/pnas.2501902122
9AU0ALipidProstaglandinDP1Homo sapiensBW245C-Gs/β1/γ22.452025-08-27To be published
9AU0 (No Gprot) ALipidProstaglandinDP1Homo sapiensBW245C-2.452025-08-27To be published




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 9E9S_nogp.zip



You can click to copy the link of this page to easily come back here later

or use this QR code to link and share this page.



You can also  read or  download a guide explaining the meaning of all files and numerical data.