Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:?1 8.9151020
2R:R:K6 5.648505
3R:R:Y14 6.0775408
4R:R:I17 3.74407
5R:R:N25 7.09409
6R:R:L51 5.245419
7R:R:W75 6.08833609
8R:R:F89 4.478507
9R:R:Y90 12.418525
10R:R:Y94 7.1375408
11R:R:W98 7.13505
12R:R:L99 4.4675408
13R:R:L100 4.6425418
14R:R:Y108 4.8408
15R:R:W134 4.85409
16R:R:F138 4.1025463
17R:R:V144 4.5475425
18R:R:V147 3.868534
19R:R:Q148 4.84405
20R:R:Y165 7.0675824
21R:R:Q172 6.898531
22R:R:L177 1.6425402
23R:R:F188 10.8675408
24R:R:C198 3.9525408
25R:R:Y199 6.54408
26R:R:R201 4.562504
27R:R:V212 5.91403
28R:R:F231 6.1825419
29R:R:Y238 5.60667627
30R:R:H242 7.6675426
31R:R:V244 3.8775405
32R:R:W254 5.4675404
33R:R:R255 7.975425
34R:R:N265 9.48519
35R:R:D269 7.42519
36R:R:F273 5.154519
37W:W:?1 12.13911110
38W:W:?2 19.3525410
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:H242 R:R:S241 14.03842.79YesNo065
2R:R:S241 R:R:W254 13.35034.94NoYes054
3L:L:?1 R:R:L183 43.78994.76YesNo005
4R:R:L183 R:R:Y94 23.533511.72NoYes058
5R:R:L187 R:R:Y94 78.20098.21NoYes068
6R:R:L187 R:R:W98 1006.83NoYes065
7R:R:W98 W:W:?2 98.85957.95YesYes050
8W:W:?1 W:W:?2 94.988549.55YesYes100
9R:R:L47 W:W:?1 68.72474.14NoYes170
10R:R:I103 R:R:L47 68.69014.28NoNo197
11R:R:F273 R:R:I103 65.33453.77YesNo199
12R:R:D269 R:R:F273 59.89574.78YesYes199
13R:R:D269 R:R:D55 32.32167.98YesNo099
14R:R:A266 R:R:D55 17.84024.63NoNo089
15R:R:A266 R:R:L58 16.65886.3NoNo087
16R:R:F89 R:R:L58 15.27018.53YesNo077
17R:R:F89 R:R:K65 10.15183.72YesNo077
18L:L:?1 R:R:Y238 23.26016.72YesYes207
19R:R:Y238 R:R:Y94 53.20333.97YesYes078
20R:R:H140 R:R:L183 21.5547.71NoNo045
21R:R:H140 R:R:L187 22.35525.14NoNo046
22R:R:D269 R:R:N265 15.725612.12YesYes199
23R:R:N230 R:R:N265 15.00313.62NoYes179
24R:R:L268 R:R:N230 13.82164.12NoNo077
25R:R:D55 R:R:N25 15.38956.73NoYes099
26R:R:L59 R:R:N25 11.14462.75NoYes069
27R:R:P43 W:W:?1 14.91824.91NoYes070
28R:R:A42 R:R:P43 10.78641.87NoNo077
29R:R:D269 R:R:L51 20.12446.79YesYes199
30R:R:L51 R:R:L99 19.86685.54YesYes098
31R:R:C95 R:R:L99 10.58543.17NoYes078
32L:L:?1 R:R:V144 13.63943.41YesYes205
33R:R:F87 R:R:V144 12.71255.24NoYes065
34R:R:F87 R:R:G88 11.11954.52NoNo065
35L:L:?1 R:R:Y165 46.372613.44YesYes204
36R:R:E166 R:R:Y165 30.95172.24NoYes054
37R:R:E166 R:R:W75 28.57955.45NoYes059
38R:R:C164 R:R:W75 12.14067.84NoYes099
39R:R:Q148 R:R:Y165 14.25527.89YesYes054
40R:R:N239 R:R:Y94 18.20474.65NoYes088
41R:R:L109 W:W:?1 25.481516.56NoYes060
42R:R:L109 R:R:Y108 24.57034.69NoYes068
43R:R:C198 R:R:Y108 14.48774.03YesYes088
44R:R:C198 R:R:S104 13.14925.16YesNo089
45R:R:R201 R:R:Y108 26.99285.14YesYes048
46R:R:I205 R:R:R201 21.92796.26NoYes054
47R:R:I205 R:R:V111 12.98581.54NoNo058
48R:R:F202 R:R:V111 11.65367.87NoNo088
49R:R:F168 R:R:Y165 16.51745.16NoYes044
50R:R:H242 R:R:Y238 12.18786.53YesYes267
51R:R:Y238 R:R:Y90 17.10189.93YesYes275
52R:R:Y165 R:R:Y90 15.48697.94YesYes245
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:?1 R:R:Y90 30.9 2 Yes Yes 0 5 0 1
L:L:?1 R:R:C141 3.64 2 Yes No 0 7 0 1
L:L:?1 R:R:I143 6.54 2 Yes No 0 7 0 1
L:L:?1 R:R:V144 3.41 2 Yes Yes 0 5 0 1
L:L:?1 R:R:Y165 13.44 2 Yes Yes 0 4 0 1
L:L:?1 R:R:R180 4.18 2 Yes No 0 5 0 1
L:L:?1 R:R:L183 4.76 2 Yes No 0 5 0 1
L:L:?1 R:R:Y238 6.72 2 Yes Yes 0 7 0 1
L:L:?1 R:R:H242 4.42 2 Yes Yes 0 6 0 1
L:L:?1 R:R:R255 11.14 2 Yes Yes 0 5 0 1
R:R:S86 R:R:Y90 5.09 2 No Yes 6 5 2 1
R:R:S86 R:R:V144 3.23 2 No Yes 6 5 2 1
R:R:S86 R:R:Y165 6.36 2 No Yes 6 4 2 1
R:R:F87 R:R:V144 5.24 0 No Yes 6 5 2 1
R:R:Y165 R:R:Y90 7.94 2 Yes Yes 4 5 1 1
R:R:Y238 R:R:Y90 9.93 2 Yes Yes 7 5 1 1
R:R:R255 R:R:Y90 8.23 2 Yes Yes 5 5 1 1
R:R:L183 R:R:Y94 11.72 0 No Yes 5 8 1 2
R:R:Y238 R:R:Y94 3.97 2 Yes Yes 7 8 1 2
R:R:H140 R:R:L183 7.71 0 No No 4 5 2 1
R:R:I143 R:R:V179 7.68 0 No No 7 4 1 2
R:R:V144 R:R:Y165 6.31 2 Yes Yes 5 4 1 1
R:R:Q148 R:R:Y165 7.89 0 Yes Yes 5 4 2 1
R:R:F168 R:R:Y165 5.16 0 No Yes 4 4 2 1
R:R:R255 R:R:Y165 7.2 2 Yes Yes 5 4 1 1
R:R:H242 R:R:R180 16.93 2 Yes No 6 5 1 1
R:R:R180 R:R:R255 5.33 2 No Yes 5 5 1 1
R:R:H242 R:R:Y238 6.53 2 Yes Yes 6 7 1 1
R:R:S262 R:R:Y238 3.82 0 No Yes 8 7 2 1
R:R:H242 R:R:S241 2.79 2 Yes No 6 5 1 2
R:R:A258 R:R:Y238 2.67 0 No Yes 7 7 2 1
R:R:E166 R:R:Y165 2.24 0 No Yes 5 4 2 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
R:R:P43 W:W:?1 4.91 0 No Yes 7 0 2 1
R:R:E106 R:R:L47 5.3 1 No No 8 7 2 2
R:R:L47 W:W:?1 4.14 1 No Yes 7 0 2 1
R:R:V132 R:R:W98 3.68 0 No Yes 4 5 2 1
R:R:L187 R:R:W98 6.83 0 No Yes 6 5 2 1
R:R:P191 R:R:W98 14.86 0 No Yes 9 5 2 1
R:R:W98 W:W:?2 7.95 0 Yes Yes 5 0 1 0
R:R:E106 W:W:?1 6.61 1 No Yes 8 0 2 1
R:R:L109 W:W:?1 16.56 0 No Yes 6 0 2 1
R:R:F113 W:W:?1 7.29 0 No Yes 6 0 2 1
R:R:Q116 W:W:?1 18.58 0 No Yes 5 0 2 1
R:R:Y117 W:W:?1 7.01 0 No Yes 5 0 2 1
R:R:S120 W:W:?1 5.99 0 No Yes 4 0 2 1
R:R:R122 R:R:Y125 6.17 0 No No 6 4 2 1
R:R:Y125 W:W:?1 8.18 1 No Yes 4 0 1 1
R:R:Y125 W:W:?2 15.2 1 No Yes 4 0 1 0
R:R:A129 W:W:?1 4.71 1 No Yes 5 0 1 1
R:R:A129 W:W:?2 4.71 1 No Yes 5 0 1 0
W:W:?1 W:W:?2 49.55 1 Yes Yes 0 0 1 0
R:R:M136 R:R:W98 2.33 0 No Yes 4 5 2 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
R:R:P43 W:W:?1 4.91 0 No Yes 7 0 1 0
R:R:E106 R:R:V44 8.56 1 No No 8 7 1 2
R:R:I103 R:R:L47 4.28 1 No No 9 7 2 1
R:R:E106 R:R:L47 5.3 1 No No 8 7 1 1
R:R:L47 W:W:?1 4.14 1 No Yes 7 0 1 0
R:R:W98 W:W:?2 7.95 0 Yes Yes 5 0 2 1
R:R:E106 W:W:?1 6.61 1 No Yes 8 0 1 0
R:R:L109 R:R:Y108 4.69 0 No Yes 6 8 1 2
R:R:A112 R:R:Y108 5.34 0 No Yes 7 8 2 2
R:R:L109 W:W:?1 16.56 0 No Yes 6 0 1 0
R:R:G110 R:R:Y117 7.24 0 No No 8 5 2 1
R:R:A112 R:R:F113 5.55 0 No No 7 6 2 1
R:R:F113 W:W:?1 7.29 0 No Yes 6 0 1 0
R:R:Q116 W:W:?1 18.58 0 No Yes 5 0 1 0
R:R:R121 R:R:Y117 14.4 0 No No 7 5 2 1
R:R:Y117 W:W:?1 7.01 0 No Yes 5 0 1 0
R:R:L119 R:R:S120 3 0 No No 4 4 2 1
R:R:S120 W:W:?1 5.99 0 No Yes 4 0 1 0
R:R:R122 R:R:Y125 6.17 0 No No 6 4 2 1
R:R:Y125 W:W:?1 8.18 1 No Yes 4 0 1 0
R:R:Y125 W:W:?2 15.2 1 No Yes 4 0 1 1
R:R:A129 W:W:?1 4.71 1 No Yes 5 0 1 0
R:R:A129 W:W:?2 4.71 1 No Yes 5 0 1 1
W:W:?1 W:W:?2 49.55 1 Yes Yes 0 0 0 1
R:R:G126 R:R:P43 2.03 0 No No 8 7 2 1
R:R:A42 R:R:P43 1.87 0 No No 7 7 2 1
R:R:F113 R:R:P114 1.44 0 No No 6 8 1 2

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 9K1D_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3
Number of Linked Nodes 255
Number of Links 285
Number of Hubs 38
Number of Links mediated by Hubs 153
Number of Communities 6
Number of Nodes involved in Communities 43
Number of Links involved in Communities 62
Path Summary
Number Of Nodes in MetaPath 53
Number Of Links MetaPath 52
Number of Shortest Paths 52065
Length Of Smallest Path 3
Average Path Length 13.7909
Length of Longest Path 28
Minimum Path Strength 1.295
Average Path Strength 8.00154
Maximum Path Strength 34.065
Minimum Path Correlation 0.7
Average Path Correlation 0.922213
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 4.7619
Average % Of Corr. Nodes 44.7357
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 48.5524
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process• cellular response to stimulus   • positive regulation of response to biotic stimulus   • immune response-regulating cell surface receptor signaling pathway   • regulation of cellular process   • response to stimulus   • pattern recognition receptor signaling pathway   • response to biotic stimulus   • cell communication   • immune response-activating signaling pathway   • positive regulation of immune response   • regulation of immune system process   • signal transduction   • positive regulation of immune system process   • innate immune response-activating signaling pathway   • regulation of biological process   • immune response   • response to other organism   • immune response-activating cell surface receptor signaling pathway   • regulation of innate immune response   • response to external stimulus   • regulation of response to stimulus   • defense response to other organism   • positive regulation of defense response   • activation of innate immune response   • regulation of immune response   • activation of immune response   • regulation of defense response   • regulation of response to biotic stimulus   • biological process involved in interspecies interaction between organisms   • regulation of response to external stimulus   • signaling   • positive regulation of biological process   • innate immune response activating cell surface receptor signaling pathway   • positive regulation of response to stimulus   • positive regulation of response to external stimulus   • immune response-regulating signaling pathway   • regulation of response to stress   • response to stress   • innate immune response   • response to external biotic stimulus   • cell surface pattern recognition receptor signaling pathway   • positive regulation of innate immune response   • cell surface receptor signaling pathway   • defense response   • biological regulation   • defense response to symbiont   • immune system process   • cellular process   • regulation of localization   • regulation of hormone secretion   • nitrogen compound transport   • regulation of peptide secretion   • transport   • hormone secretion   • localization   • peptide secretion   • regulation of secretion by cell   • secretion by cell   • amide transport   • signal release   • regulation of biological quality   • regulation of peptide hormone secretion   • regulation of signaling   • regulation of transport   • secretion   • regulation of hormone levels   • regulation of peptide transport   • export from cell   • cell-cell signaling   • establishment of localization   • regulation of secretion   • peptide transport   • peptide hormone secretion   • regulation of cell communication   • hormone transport   • protein localization   • negative regulation of protein transport   • establishment of protein localization   • negative regulation of biological process   • negative regulation of transport   • negative regulation of secretion   • cellular macromolecule localization   • negative regulation of hormone secretion   • negative regulation of secretion by cell   • negative regulation of peptide hormone secretion   • establishment of protein localization to extracellular region   • negative regulation of establishment of protein localization   • protein secretion   • regulation of protein secretion   • negative regulation of protein secretion   • cellular localization   • regulation of protein localization   • negative regulation of signaling   • negative regulation of cell communication   • protein localization to extracellular region   • negative regulation of peptide secretion   • negative regulation of cellular process   • negative regulation of protein localization   • regulation of establishment of protein localization   • regulation of protein transport   • negative regulation of insulin secretion   • protein transport   • regulation of cellular localization   • regulation of insulin secretion   • macromolecule localization   • insulin secretion   • multicellular organismal process   • positive regulation of interleukin-8 production   • positive regulation of macromolecule biosynthetic process   • positive regulation of metabolic process   • positive regulation of biosynthetic process   • cytokine production   • regulation of cytokine production   • positive regulation of macromolecule metabolic process   • regulation of multicellular organismal process   • positive regulation of cellular process   • regulation of biosynthetic process   • interleukin-8 production   • regulation of macromolecule metabolic process   • gene expression   • macromolecule biosynthetic process   • regulation of gene expression   • biosynthetic process   • positive regulation of gene expression   • positive regulation of multicellular organismal process   • metabolic process   • regulation of macromolecule biosynthetic process   • macromolecule metabolic process   • positive regulation of cytokine production   • regulation of metabolic process   • regulation of interleukin-8 production   • regulation of chemokine production   • chemokine production   • positive regulation of chemokine production   • cell chemotaxis   • leukocyte chemotaxis involved in inflammatory response   • chemotaxis   • leukocyte migration involved in inflammatory response   • leukocyte migration   • cellular response to chemical stimulus   • taxis   • response to chemical   • cell migration   • inflammatory response   • cell motility   • leukocyte chemotaxis   • locomotion   • phospholipase C-activating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • developmental process   • fat cell differentiation   • cellular developmental process   • cell differentiation   • mucosal immune response   • organ or tissue specific immune response   • lipid storage   • nutrient storage   • positive regulation of acute inflammatory response   • positive regulation of inflammatory response   • regulation of acute inflammatory response to non-antigenic stimulus   • acute inflammatory response   • acute inflammatory response to non-antigenic stimulus   • regulation of inflammatory response   • positive regulation of acute inflammatory response to non-antigenic stimulus   • regulation of acute inflammatory response   • response to lipid   • response to fatty acid   • response to oxygen-containing compound   • cellular response to oxygen-containing compound   • cellular response to fatty acid   • cellular response to lipid   • positive regulation of cell communication   • positive regulation of establishment of protein localization   • positive regulation of insulin secretion   • positive regulation of peptide hormone secretion   • positive regulation of protein localization   • positive regulation of secretion by cell   • positive regulation of protein transport   • positive regulation of hormone secretion   • positive regulation of secretion   • positive regulation of peptide secretion   • positive regulation of protein secretion   • positive regulation of transport   • positive regulation of signaling   • regulation of immune effector process   • positive regulation of immune effector process   • cytokine production involved in immune response   • production of molecular mediator of immune response   • regulation of cytokine production involved in immune response   • immune effector process   • positive regulation of cytokine production involved in immune response   • positive regulation of production of molecular mediator of immune response   • regulation of production of molecular mediator of immune response   • chemical homeostasis   • homeostatic process   • glucose homeostasis   • carbohydrate homeostasis   • ligand-gated ion channel signaling pathway   • cell periphery   • cellular anatomical structure   • plasma membrane   • membrane   • cell projection   • D2 dopamine receptor binding   • protein binding   • binding   • signaling receptor binding   • G protein-coupled receptor binding   • dopamine receptor binding   • phosphorus-oxygen lyase activity   • enzyme regulator activity   • cyclase regulator activity   • molecular function regulator activity   • cyclase activity   • adenylate cyclase regulator activity   • lyase activity   • catalytic activity   • adenylate cyclase activity   • guanyl nucleotide binding   • GTP binding   • nucleotide binding   • guanyl ribonucleotide binding   • purine ribonucleotide binding   • purine ribonucleoside triphosphate binding   • nucleoside phosphate binding   • ion binding   • purine nucleotide binding   • anion binding   • heterocyclic compound binding   • carbohydrate derivative binding   • ribonucleotide binding   • small molecule binding   • cation binding   • magnesium ion binding   • metal ion binding   • GDP binding   • G protein-coupled serotonin receptor binding   • protein-containing complex binding   • G-protein beta/gamma-subunit complex binding   • pyrophosphatase activity   • GTPase activity   • G protein activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • response to hormone   • response to endogenous stimulus   • response to peptide hormone   • response to nitrogen compound   • cell division   • mononuclear cell migration   • lymphocyte migration   • T cell migration   • regulation of steroid biosynthetic process   • regulation of cholesterol biosynthetic process   • regulation of cholesterol metabolic process   • steroid metabolic process   • regulation of lipid metabolic process   • sterol metabolic process   • cholesterol metabolic process   • lipid biosynthetic process   • alcohol metabolic process   • regulation of primary metabolic process   • regulation of small molecule metabolic process   • positive regulation of lipid metabolic process   • small molecule metabolic process   • steroid biosynthetic process   • secondary alcohol biosynthetic process   • regulation of alcohol biosynthetic process   • small molecule biosynthetic process   • regulation of steroid metabolic process   • cholesterol biosynthetic process   • positive regulation of cholesterol biosynthetic process   • primary metabolic process   • secondary alcohol metabolic process   • positive regulation of steroid biosynthetic process   • sterol biosynthetic process   • positive regulation of lipid biosynthetic process   • regulation of sterol biosynthetic process   • alcohol biosynthetic process   • positive regulation of cholesterol metabolic process   • positive regulation of steroid metabolic process   • regulation of lipid biosynthetic process   • positive regulation of small molecule metabolic process   • positive regulation of alcohol biosynthetic process   • positive regulation of sterol biosynthetic process   • lipid metabolic process   • regulation of cytoskeleton organization   • regulation of cellular component organization   • microtubule cytoskeleton organization   • regulation of mitotic spindle organization   • mitotic cell cycle   • cellular component organization   • cell cycle   • cellular component organization or biogenesis   • regulation of cell cycle   • microtubule cytoskeleton organization involved in mitosis   • spindle organization   • cell cycle process   • regulation of cell cycle process   • regulation of microtubule-based process   • regulation of spindle organization   • regulation of organelle organization   • mitotic spindle organization   • organelle organization   • mitotic cell cycle process   • microtubule-based process   • cytoskeleton organization   • regulation of microtubule cytoskeleton organization   • positive regulation of protein localization to cell periphery   • protein localization to cell periphery   • positive regulation of protein localization to cell cortex   • regulation of protein localization to cell periphery   • regulation of protein localization to cell cortex   • protein localization to cell cortex   • response to ketone   • response to prostaglandin   • response to alcohol   • response to prostaglandin E   • cellular response to forskolin   • cellular response to alcohol   • response to forskolin   • cellular response to ketone   • midbody   • membrane-bounded organelle   • intracellular anatomical structure   • nucleus   • membrane-enclosed lumen   • intracellular membraneless organelle   • intracellular membrane-bounded organelle   • nucleolus   • intracellular organelle lumen   • intracellular organelle   • organelle lumen   • organelle   • membraneless organelle   • nuclear lumen   • cell cortex   • cytoplasm   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cytoplasmic side of plasma membrane   • GTPase complex   • extrinsic component of membrane   • extrinsic component of cytoplasmic side of plasma membrane   • extracellular exosome   • extracellular vesicle   • extracellular organelle   • extracellular region   • extracellular space   • vesicle   • extracellular membrane-bounded organelle   • centrosome   • microtubule organizing center   • cytoskeleton   • microtubule cytoskeleton   • centriolar satellite   • cytosol   • nucleoplasm   • vacuolar membrane   • lytic vacuole   • vacuole   • lytic vacuole membrane   • bounding membrane of organelle   • lysosomal membrane   • organelle membrane   • lysosome   • Golgi apparatus   • endomembrane system   • cilium   • plasma membrane bounded cell projection   • ciliary basal body   • enzyme binding   • GTPase binding   • signaling receptor complex adaptor activity   • protein-macromolecule adaptor activity   • molecular adaptor activity   • signaling adaptor activity   • system process   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of taste   • sensory organ development   • eye development   • animal organ development   • retina development in camera-type eye   • visual system development   • multicellular organism development   • camera-type eye development   • anatomical structure development   • sensory system development   • system development   • cell population proliferation   • cellular response to prostaglandin stimulus   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to hormone stimulus   • small GTPase-mediated signal transduction   • Ras protein signal transduction   • intracellular signal transduction   • intracellular signaling cassette   • cellular response to nitrogen compound   • response to dopamine   • cellular response to dopamine   • response to monoamine   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • G protein-coupled dopamine receptor signaling pathway   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cellular response to monoamine stimulus   • synaptic signaling   • cellular response to acetylcholine   • acetylcholine receptor signaling pathway   • postsynaptic signal transduction   • G protein-coupled acetylcholine receptor signaling pathway   • response to acetylcholine   • non-motile cilium   • 9+0 non-motile cilium   • neuron projection   • photoreceptor disc membrane   • photoreceptor outer segment   • photoreceptor cell cilium   • synapse   • cell junction   • G-protein beta-subunit binding   • fibroblast proliferation
Gene OntologyCellular Component
SCOP2Domain Identifier• Ras-like P-loop GTPases
SCOP2Family Identifier• Ras-like P-loop GTPases
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeBUA
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodeBUA
NameButyric Acid
SynonymsButyrate
Identifier
FormulaC4 H8 O2
Molecular Weight88.105
SMILES
PubChem264
Formal Charge0
Total Atoms14
Total Chiral Atoms0
Total Bonds13
Total Aromatic Bonds0

CodeCLR
PDB ResiduesW:W:?1 W:W:?2
Environment DetailsOpen EMBL-EBI Page
CodeCLR
NameCholesterol
Synonyms
  • Cholesterin
  • Cholesterol
  • Cholest-5-en-3beta-ol
  • (3β,14β,17α)-cholest-5-en-3-ol
Identifier
FormulaC27 H46 O
Molecular Weight386.654
SMILES
PubChem5997
Formal Charge0
Total Atoms74
Total Chiral Atoms8
Total Bonds77
Total Aromatic Bonds0

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtO15552
Sequence
>9K1D_nogp_Chain_R
DWKSSLILM AYIIIFLTG LPANLLALR AFVGRIRQP QPAPVHILL 
LSLTLADLL LLLLLPFKI IEAASNFRW YLPKVVCAL TSFGFYSSI 
YCSTWLLAG ISIERYLGV AFPVQYKLS RRPLYGVIA ALVAWVMSF 
GHCTIVIIV QYLNTCYEN FTDNQLDVV LPVRLELCL VLFFIPMAV 
TIFCYWRFV WIMLSQPLV GAQRRRRAV GLAVVTLLN FLVCFGPYN 
VSHLVGYHQ RKSPWWRSI AVVFSSLNA SLDPLLFYF SSSVV


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
9K1DALipidFree Fatty AcidFFA2Homo sapiensButanoic acidCholesterolGi1/β1/γ23.342024-12-1110.1016/j.celrep.2024.115024
9K1D (No Gprot) ALipidFree Fatty AcidFFA2Homo sapiensButanoic acidCholesterol3.342024-12-1110.1016/j.celrep.2024.115024
8J23ALipidFree Fatty AcidFFA2Homo sapiens--Gi1/β1/γ23.22024-04-17To be published
8J23 (No Gprot) ALipidFree Fatty AcidFFA2Homo sapiens--3.22024-04-17To be published
8T3SALipidFree Fatty AcidFFA2Homo sapiensButyric acid-chim(NtGi2L-Gs-CtGq)/β1/γ23.072024-01-2410.1126/sciadv.adj2384
8T3S (No Gprot) ALipidFree Fatty AcidFFA2Homo sapiensButyric acid-3.072024-01-2410.1126/sciadv.adj2384
8J24ALipidFree Fatty AcidFFA2Homo sapiensAcetic acid-Gi1/β1/γ22.62024-01-2410.1038/s41422-023-00914-z
8J24 (No Gprot) ALipidFree Fatty AcidFFA2Homo sapiensAcetic acid-2.62024-01-2410.1038/s41422-023-00914-z
8J22ALipidFree Fatty AcidFFA2Homo sapiensTUG-1375-Gi1/β1/γ23.22024-01-2410.1038/s41422-023-00914-z
8J22 (No Gprot) ALipidFree Fatty AcidFFA2Homo sapiensTUG-1375-3.22024-01-2410.1038/s41422-023-00914-z




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 9K1D_nogp.zip



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