Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:?1 8.301431420
2R:R:L29 3.2075407
3R:R:P43 3.5447
4R:R:L51 6.3225419
5R:R:D55 5.572519
6R:R:Y76 9.37833
7R:R:F87 4.4225406
8R:R:F89 4.76507
9R:R:Y94 6.645408
10R:R:L99 3.3975408
11R:R:E106 5.582548
12R:R:Y108 6.9525408
13R:R:F113 4.5775406
14R:R:H140 6.035404
15R:R:Y165 9.35424
16R:R:L177 3.5402
17R:R:R180 12.2775425
18R:R:F188 8.988518
19R:R:Y199 7.588518
20R:R:F231 4.61333619
21R:R:F235 8.5575419
22R:R:Y238 6.974527
23R:R:H242 7.734506
24R:R:P252 5.08401
25R:R:W254 6.7525404
26R:R:N265 9.03419
27R:R:D269 8.468519
28R:R:F273 5.962519
29W:W:?1 5.841040
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:?1 R:R:R180 28.30476.09YesYes205
2R:R:H242 R:R:R180 33.816619.18YesYes065
3R:R:H242 R:R:Y94 42.16194.36YesYes068
4R:R:N239 R:R:Y94 57.6965.81NoYes088
5R:R:F188 R:R:N239 10027.79YesNo088
6R:R:F188 R:R:T97 63.84893.89YesNo188
7R:R:F231 R:R:T97 36.52813.89YesNo198
8R:R:F231 R:R:L100 51.60776.09YesNo198
9R:R:D269 R:R:L100 50.96674.07YesNo198
10R:R:D269 R:R:D55 61.40537.98YesYes199
11R:R:A266 R:R:D55 56.12824.63NoYes089
12R:R:A266 R:R:L58 55.16096.3NoNo087
13R:R:F89 R:R:L58 52.24378.53YesNo077
14R:R:F89 R:R:K65 40.33773.72YesNo077
15R:R:K65 R:R:Y14 26.20764.78NoNo078
16R:R:V260 R:R:Y14 23.28538.83NoNo058
17R:R:I10 R:R:V260 22.23424.61NoNo055
18R:R:I10 R:R:S256 21.17933.1NoNo054
19R:R:F73 R:R:S256 19.28153.96NoNo044
20R:R:E166 R:R:F73 15.02514.66NoNo054
21R:R:E166 R:R:N167 14.1583.94NoNo054
22R:R:N167 R:R:R74 13.08412.41NoNo044
23R:R:R74 R:R:W75 12.007624.99NoNo049
24L:L:?1 R:R:Y238 28.27044.2YesYes207
25R:R:H242 R:R:Y238 35.79436.53YesYes067
26R:R:C184 R:R:H242 39.1994.42NoYes066
27R:R:C184 R:R:N239 43.27644.72NoNo068
28R:R:F188 R:R:M192 36.65887.46YesNo186
29R:R:F231 R:R:M192 36.76043.73YesNo196
30R:R:F235 R:R:T97 27.333512.97YesNo198
31R:R:F235 R:R:N265 27.027610.87YesYes199
32R:R:D269 R:R:N265 25.939713.46YesYes199
33R:R:D269 R:R:F273 16.48875.97YesYes199
34R:R:F273 R:R:L48 12.01146.09YesNo198
35R:R:F32 R:R:L48 10.95414.61NoNo078
36R:R:L187 R:R:Y94 22.50975.86NoYes068
37R:R:H140 R:R:L187 21.95117.71YesNo046
38R:R:H140 R:R:M136 20.94835.25YesNo044
39R:R:M136 R:R:W98 20.378312.8NoNo045
40R:R:W98 W:W:?1 18.640411.2NoYes050
41R:R:E68 R:R:K65 14.1586.75NoNo057
42R:R:E68 R:R:Y76 10.903225.81NoYes353
43L:L:?1 R:R:F87 24.91273.49YesYes006
44R:R:F138 R:R:F87 10.51984.29NoYes036
45R:R:F231 R:R:T195 23.59633.89YesNo097
46R:R:S104 R:R:T195 22.96167.99NoNo097
47R:R:C198 R:R:S104 10.69125.16NoNo089
48R:R:S104 R:R:Y199 17.280912.72NoYes098
49R:R:A224 R:R:Y199 17.11962.67NoYes078
50R:R:A224 R:R:F202 12.60552.77NoNo078
51R:R:H242 R:R:S241 10.6294.18YesNo065
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:?1 R:R:Y90 24.34 2 Yes No 0 5 0 1
L:L:?1 R:R:C141 4.54 2 Yes No 0 7 0 1
L:L:?1 R:R:V144 11.73 2 Yes No 0 5 0 1
L:L:?1 R:R:I145 4.09 2 Yes No 0 4 0 1
L:L:?1 R:R:Q148 12.39 2 Yes No 0 5 0 1
L:L:?1 R:R:Y165 15.94 2 Yes Yes 0 4 0 1
L:L:?1 R:R:Q172 3.81 2 Yes No 0 1 0 1
L:L:?1 R:R:V175 4.27 2 Yes No 0 3 0 1
L:L:?1 R:R:V176 11.73 2 Yes No 0 4 0 1
L:L:?1 R:R:V179 8.53 2 Yes No 0 4 0 1
L:L:?1 R:R:R180 6.09 2 Yes Yes 0 5 0 1
L:L:?1 R:R:Y238 4.2 2 Yes Yes 0 7 0 1
R:R:A83 R:R:Y165 4 0 No Yes 7 4 2 1
R:R:F87 R:R:G88 6.02 0 Yes No 6 5 1 2
R:R:F138 R:R:F87 4.29 0 No Yes 3 6 2 1
R:R:F87 R:R:T142 3.89 0 Yes No 6 4 1 2
R:R:Y238 R:R:Y90 11.91 2 Yes No 7 5 1 1
R:R:Q148 R:R:Y149 9.02 2 No No 5 5 1 2
R:R:Q148 R:R:Y165 11.27 2 No Yes 5 4 1 1
R:R:F168 R:R:Y165 6.19 0 No Yes 4 4 2 1
R:R:F168 R:R:Q172 8.2 0 No No 4 1 2 1
R:R:Q172 R:R:T169 8.5 0 No No 1 4 1 2
R:R:R180 R:R:V176 7.85 2 Yes No 5 4 1 1
R:R:H242 R:R:R180 19.18 0 Yes Yes 6 5 2 1
R:R:R180 R:R:R255 15.99 2 Yes No 5 5 1 2
R:R:H242 R:R:Y238 6.53 0 Yes Yes 6 7 2 1
R:R:R255 R:R:Y238 8.23 0 No Yes 5 7 2 1
R:R:A258 R:R:Y238 4 0 No Yes 7 7 2 1
L:L:?1 R:R:F87 3.49 2 Yes Yes 0 6 0 1
R:R:S86 R:R:Y90 2.54 0 No No 6 5 2 1
L:L:?1 R:R:V147 1.07 2 Yes No 0 4 0 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
R:R:E106 R:R:P43 4.72 4 Yes Yes 8 7 1 1
R:R:P43 W:W:?1 5.38 4 Yes Yes 7 0 1 0
R:R:E106 R:R:V44 5.7 4 Yes No 8 7 1 2
R:R:E106 R:R:L47 3.98 4 Yes No 8 7 1 2
R:R:M136 R:R:W98 12.8 0 No No 4 5 2 1
R:R:P191 R:R:W98 16.21 0 No No 9 5 2 1
R:R:W98 W:W:?1 11.2 0 No Yes 5 0 1 0
R:R:E106 W:W:?1 10.14 4 Yes Yes 8 0 1 0
R:R:R122 R:R:Y125 15.43 0 No No 6 4 2 1
R:R:Y125 W:W:?1 7.69 0 No Yes 4 0 1 0
R:R:A129 W:W:?1 5.17 0 No Yes 5 0 1 0
R:R:V132 W:W:?1 4.88 0 No Yes 4 0 1 0
R:R:V194 W:W:?1 4.88 0 No Yes 6 0 1 0
R:R:A101 W:W:?1 3.44 0 No Yes 8 0 1 0
R:R:E106 R:R:Y117 3.37 4 Yes No 8 5 1 2
R:R:S120 W:W:?1 3.28 0 No Yes 4 0 1 0
R:R:I105 W:W:?1 2.34 0 No Yes 6 0 1 0
R:R:G126 R:R:P43 2.03 0 No Yes 8 7 2 1
R:R:A101 R:R:G102 1.95 0 No No 8 6 1 2
R:R:A42 R:R:P43 1.87 0 No Yes 7 7 2 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 9CM7_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3.56
Number of Linked Nodes 258
Number of Links 277
Number of Hubs 29
Number of Links mediated by Hubs 126
Number of Communities 4
Number of Nodes involved in Communities 33
Number of Links involved in Communities 45
Path Summary
Number Of Nodes in MetaPath 52
Number Of Links MetaPath 51
Number of Shortest Paths 102603
Length Of Smallest Path 3
Average Path Length 16.7623
Length of Longest Path 39
Minimum Path Strength 1.485
Average Path Strength 7.49845
Maximum Path Strength 22.64
Minimum Path Correlation 0.7
Average Path Correlation 0.918793
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 3.84615
Average % Of Corr. Nodes 38.4185
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 42.8349
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain   • Ras-like P-loop GTPases
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain   • Ras-like P-loop GTPases
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
Code9UJ
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
Code9UJ
Name(2R,4R)-2-(2-chlorophenyl)-3-[4-(3,5-dimethyl-1,2-oxazol-4-yl)phenyl]carbonyl-1,3-thiazolidine-4-carboxylic acid
SynonymsTUG-1375
Identifier
FormulaC22 H19 Cl N2 O4 S
Molecular Weight442.915
SMILES
PubChem138319694
Formal Charge0
Total Atoms49
Total Chiral Atoms2
Total Bonds52
Total Aromatic Bonds17

CodeA1A
PDB ResiduesW:W:?1
Environment DetailsOpen EMBL-EBI Page
CodeA1A
Name6-AMINO HEXANOIC ACID
Synonyms
Identifier
FormulaC33 H40 N4 O6
Molecular Weight588.694
SMILES
PubChem5327090
Formal Charge0
Total Atoms83
Total Chiral Atoms4
Total Bonds86
Total Aromatic Bonds18

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtO15552
Sequence
>9CM7_nogp_Chain_R
PDWKSSLIL MAYIIIFLT GLPANLLAL RAFVGRIRQ PQPAPVHIL 
LLSLTLADL LLLLLLPFK IIEAASNFR WYLPKVVCA LTSFGFYSS 
IYCSTWLLA GISIERYLG VAFPVQYKL SRRPLYGVI AALVAWVMS 
FGHCTIVII VQYLNTCYE NFTDNQLDV VLPVRLELC LVLFFIPMA 
VTIFCYWRF VWIMLSQPL VGAQRRRRA VGLAVVTLL NFLVCFGPY 
NVSHLVGYH QRKSPWWRS IAVVFSSLN ASLDPLLFY FSSSV


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
9CM3ALipidFree Fatty AcidFFA2Homo sapiensTUG-1375Compound 187chim(NtGi1L-Gs-CtGq)/β1/γ23.062025-06-25doi.org/10.1038/s41586-025-09186-6
9CM3 (No Gprot) ALipidFree Fatty AcidFFA2Homo sapiensTUG-1375Compound 1873.062025-06-25doi.org/10.1038/s41586-025-09186-6
9NS9ALipidFree Fatty AcidFFA2Homo sapiensTUG-1375Compound 187Gi1/β1/γ23.32025-06-25doi.org/10.1038/s41586-025-09186-6
9NS9 (No Gprot) ALipidFree Fatty AcidFFA2Homo sapiensTUG-1375Compound 1873.32025-06-25doi.org/10.1038/s41586-025-09186-6
9CM7ALipidFree Fatty AcidFFA2Homo sapiensTUG-1375AZ-1729Gi1/β1/γ23.292025-06-25doi.org/10.1038/s41586-025-09186-6
9CM7 (No Gprot) ALipidFree Fatty AcidFFA2Homo sapiensTUG-1375AZ-17293.292025-06-25doi.org/10.1038/s41586-025-09186-6
8Y6WALipidFree Fatty AcidFFA2Homo sapiensTUG-13754-CMTBGi1/β1/γ23.192025-04-02doi.org/10.1038/s41467-025-57983-4
8Y6W (No Gprot) ALipidFree Fatty AcidFFA2Homo sapiensTUG-13754-CMTB3.192025-04-02doi.org/10.1038/s41467-025-57983-4
9CLWALipidFree Fatty AcidFFA2Homo sapiensTUG-13754-CMTBchim(NtGi1L-Gs-CtGq)/β1/γ23.192025-06-25doi.org/10.1038/s41586-025-09186-6
9CLW (No Gprot) ALipidFree Fatty AcidFFA2Homo sapiensTUG-13754-CMTB3.192025-06-25doi.org/10.1038/s41586-025-09186-6
9K1DALipidFree Fatty AcidFFA2Homo sapiensButanoic acid-Gi1/β1/γ23.342024-12-11doi.org/10.1016/j.celrep.2024.115024
9K1D (No Gprot) ALipidFree Fatty AcidFFA2Homo sapiensButanoic acid-3.342024-12-11doi.org/10.1016/j.celrep.2024.115024
8J22ALipidFree Fatty AcidFFA2Homo sapiensTUG-1375-Gi1/β1/γ23.22024-01-24doi.org/10.1038/s41422-023-00914-z
8J22 (No Gprot) ALipidFree Fatty AcidFFA2Homo sapiensTUG-1375-3.22024-01-24doi.org/10.1038/s41422-023-00914-z
8J24ALipidFree Fatty AcidFFA2Homo sapiensAcetic acid-Gi1/β1/γ22.62024-01-24doi.org/10.1038/s41422-023-00914-z
8J24 (No Gprot) ALipidFree Fatty AcidFFA2Homo sapiensAcetic acid-2.62024-01-24doi.org/10.1038/s41422-023-00914-z
8T3SALipidFree Fatty AcidFFA2Homo sapiensButyric acid-chim(NtGi2L-Gs-CtGq)/β1/γ23.072024-01-24doi.org/10.1126/sciadv.adj2384
8T3S (No Gprot) ALipidFree Fatty AcidFFA2Homo sapiensButyric acid-3.072024-01-24doi.org/10.1126/sciadv.adj2384
8Y6YALipidFree Fatty AcidFFA2Homo sapiensGLPG0974--3.362025-04-02doi.org/10.1038/s41467-025-57983-4
8J23ALipidFree Fatty AcidFFA2Homo sapiens--Gi1/β1/γ23.22024-04-17To be published
8J23 (No Gprot) ALipidFree Fatty AcidFFA2Homo sapiens--3.22024-04-17To be published




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 9CM7_nogp.zip



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