Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:?6 8.482520
2L:L:R7 6.212520
3L:L:?9 8.194510
4R:R:F51 7.45546
5R:R:N62 4.54409
6R:R:Y80 8.755408
7R:R:D90 5.69409
8R:R:T101 4.55446
9R:R:D126 8.6775424
10R:R:Y148 8.945468
11R:R:F152 11.1875466
12R:R:Y157 7.3375409
13R:R:W174 4.7475409
14R:R:C177 2.56457
15R:R:F184 4.978504
16R:R:F201 8.874536
17R:R:Y212 3.934509
18R:R:W258 5.73286737
19R:R:H264 9.5225414
20R:R:F267 5.71474
21R:R:F284 7.946513
22R:R:Y287 6.315405
23R:R:Y302 4.54409
24R:R:A303 2.435408
25R:R:L309 3.2875408
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:F284 R:R:L288 77.82374.87YesNo034
2L:L:?6 R:R:L288 76.77443.52YesNo004
3R:R:F51 R:R:M292 31.2983.73YesNo065
4R:R:M292 R:R:N97 32.83485.61NoNo056
5R:R:I129 R:R:N97 34.40474.25NoNo056
6L:L:?6 R:R:I129 39.015115.72YesNo005
7L:L:R7 R:R:S188 31.57079.22YesNo004
8L:L:W8 R:R:S188 30.05048.65NoNo004
9L:L:W8 R:R:I194 28.41445.87NoNo004
10R:R:F284 R:R:H264 36.990814.71YesYes134
11R:R:H264 R:R:Y287 34.69393.27YesYes045
12R:R:F280 R:R:Y287 21.606212.38NoYes025
13R:R:F267 R:R:F280 19.89596.43YesNo042
14R:R:C277 R:R:F267 10.94779.78NoYes764
15R:R:F51 R:R:V46 11.04682.62YesNo065
16R:R:F261 R:R:F284 98.90944.29NoYes053
17R:R:F261 R:R:F262 1004.29NoNo055
18R:R:F262 R:R:W258 97.04213.01NoYes357
19R:R:S136 R:R:W258 48.09553.71NoYes097
20R:R:D90 R:R:S136 48.32694.42YesNo099
21R:R:D90 R:R:N62 75.81594.04YesYes099
22R:R:N62 R:R:P299 70.18926.52YesNo099
23R:R:P299 R:R:V65 65.79361.77NoNo099
24R:R:A303 R:R:V65 64.65343.39YesNo089
25R:R:A303 R:R:L309 56.20923.15YesYes088
26R:R:L309 R:R:L75 36.59424.15YesNo089
27R:R:L75 R:R:N72 21.90375.49NoNo097
28R:R:N72 R:R:T312 17.094910.24NoNo077
29R:R:K71 R:R:T312 13.80653NoNo057
30R:R:I316 R:R:K71 12.13755.82NoNo075
31R:R:I316 R:R:V67 10.4521.54NoNo074
32R:R:L75 R:R:Y80 15.425914.07NoYes098
33R:R:S77 R:R:Y80 23.18432.54NoYes078
34R:R:P78 R:R:S77 19.92071.78NoNo067
35R:R:P78 R:R:V166 16.64053.53NoNo067
36R:R:F81 R:R:V166 10.03062.62NoNo047
37R:R:L309 R:R:S306 15.97123YesNo087
38R:R:S306 R:R:Y80 14.45927.63NoYes078
39R:R:N294 R:R:W258 55.994412.43NoYes097
40R:R:D298 R:R:N294 56.473612.12NoNo099
41R:R:D298 R:R:L86 88.44914.07NoNo099
42R:R:L86 R:R:S139 41.65913NoNo098
43R:R:S139 R:R:S85 40.18843.26NoNo089
44R:R:I170 R:R:S85 24.57246.19NoNo079
45R:R:F82 R:R:I170 22.91993.77NoNo087
46R:R:D146 R:R:F82 19.56548.36NoNo098
47R:R:S85 R:R:W174 16.20264.94NoYes099
48R:R:L140 R:R:L86 62.94314.15NoNo089
49R:R:I194 R:R:V193 21.70543.07NoNo045
50R:R:F184 R:R:V193 19.98685.24YesNo045
51R:R:A135 R:R:W174 10.94777.78NoYes079
52R:R:L140 R:R:Y302 61.73683.52NoYes089
53R:R:R147 R:R:Y302 51.44186.17NoYes099
54R:R:R147 R:R:Y212 50.13636.17NoYes099
55R:R:M208 R:R:Y212 10.94773.59NoYes089
56R:R:D146 R:R:Y157 17.92125.75NoYes099
57R:R:M161 R:R:Y157 12.71599.58NoYes079
58R:R:M215 R:R:Y212 22.92822.39NoYes099
59R:R:M215 R:R:Y148 12.40193.59NoYes098
60R:R:F152 R:R:M218 10.70816.22YesNo065
61R:R:L250 R:R:Y212 17.87993.52NoYes089
62R:R:L250 R:R:T246 16.16132.95NoNo089
63R:R:G243 R:R:T246 14.42623.64NoNo089
64R:R:G243 R:R:N240 12.67455.09NoNo087
65R:R:I301 R:R:Y302 10.93124.84NoYes099
66L:L:?6 L:L:R7 39.77537.21YesYes200
67R:R:D298 R:R:D90 34.67743.99NoYes099
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:R2 R:R:D122 4.76 0 No No 0 8 0 1
L:L:?4 R:R:I104 5.81 0 No No 0 4 0 1
L:L:H5 R:R:F51 18.1 4 No Yes 0 6 0 1
L:L:H5 R:R:T101 6.85 4 No Yes 0 6 0 1
L:L:?6 R:R:E100 5.61 2 Yes No 0 5 0 1
L:L:?6 R:R:D126 10.35 2 Yes Yes 0 4 0 1
L:L:?6 R:R:I129 15.72 2 Yes No 0 5 0 1
L:L:?6 R:R:L288 3.52 2 Yes No 0 4 0 1
L:L:R7 R:R:D126 5.96 2 Yes Yes 0 4 0 1
L:L:R7 R:R:I185 6.26 2 Yes No 0 5 0 1
L:L:R7 R:R:S188 9.22 2 Yes No 0 4 0 1
L:L:W8 R:R:S188 8.65 0 No No 0 4 0 1
L:L:W8 R:R:I194 5.87 0 No No 0 4 0 1
L:L:?9 R:R:Q43 6 1 Yes No 0 3 0 1
L:L:?9 R:R:H264 4.35 1 Yes Yes 0 4 0 1
L:L:?9 R:R:Y268 3.96 1 Yes No 0 5 0 1
L:L:?9 R:R:F284 12.35 1 Yes Yes 0 3 0 1
R:R:F284 R:R:Q43 3.51 1 Yes No 3 3 1 1
R:R:F51 R:R:T101 7.78 4 Yes Yes 6 6 1 1
R:R:F51 R:R:I289 5.02 4 Yes No 6 5 1 2
R:R:F51 R:R:M292 3.73 4 Yes No 6 5 1 2
R:R:I129 R:R:N97 4.25 0 No No 5 6 1 2
R:R:M292 R:R:N97 5.61 0 No No 5 6 2 2
R:R:E100 R:R:I125 6.83 2 No No 5 5 1 2
R:R:D126 R:R:E100 9.09 2 Yes No 4 5 1 1
R:R:D122 R:R:D126 9.31 0 No Yes 8 4 1 1
R:R:I185 R:R:S127 10.84 0 No No 5 5 1 2
R:R:I194 R:R:V193 3.07 0 No No 4 5 1 2
R:R:I194 R:R:I269 8.83 0 No No 4 4 1 2
R:R:F261 R:R:F284 4.29 0 No Yes 5 3 2 1
R:R:H264 R:R:M281 15.76 1 Yes No 4 3 1 2
R:R:F284 R:R:H264 14.71 1 Yes Yes 3 4 1 1
R:R:H264 R:R:Y287 3.27 1 Yes Yes 4 5 1 2
R:R:F284 R:R:L288 4.87 1 Yes No 3 4 1 1
R:R:F51 R:R:V46 2.62 4 Yes No 6 5 1 2
L:L:R7 R:R:N123 2.41 2 Yes No 0 5 0 1
R:R:G98 R:R:T101 1.82 0 No Yes 6 6 2 1
R:R:P48 R:R:T101 1.75 0 No Yes 5 6 2 1
R:R:I129 R:R:S96 1.55 0 No No 5 6 1 2
R:R:N123 R:R:V119 1.48 0 No No 5 3 1 2

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 7AUE_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 2.95
Number of Linked Nodes 237
Number of Links 243
Number of Hubs 25
Number of Links mediated by Hubs 99
Number of Communities 7
Number of Nodes involved in Communities 24
Number of Links involved in Communities 27
Path Summary
Number Of Nodes in MetaPath 68
Number Of Links MetaPath 67
Number of Shortest Paths 25214
Length Of Smallest Path 3
Average Path Length 14.9165
Length of Longest Path 34
Minimum Path Strength 1.23
Average Path Strength 5.30414
Maximum Path Strength 16.615
Minimum Path Correlation 0.7
Average Path Correlation 0.933095
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 4.16667
Average % Of Corr. Nodes 50.826
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 33.0164
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeDAL
PDB ResiduesL:L:?4
Environment DetailsOpen EMBL-EBI Page
CodeDAL
NameD-Alanine
Synonyms(R)-alanine
Identifier
FormulaC3 H7 N O2
Molecular Weight89.093
SMILES
PubChem71080
Formal Charge0
Total Atoms13
Total Chiral Atoms1
Total Bonds12
Total Aromatic Bonds0

CodeDPN
PDB ResiduesL:L:?6
Environment DetailsOpen EMBL-EBI Page
CodeDPN
NameD-Phenylalanine
SynonymsD-Phenylalanine
Identifier
FormulaC9 H11 N O2
Molecular Weight165.189
SMILES
PubChem71567
Formal Charge0
Total Atoms23
Total Chiral Atoms1
Total Bonds23
Total Aromatic Bonds6

CodeCY3
PDB ResiduesL:L:?9
Environment DetailsOpen EMBL-EBI Page
CodeCY3
NameCysteinamide
Synonyms
  • 2-amino-3-mercapto-propionamide
  • L-Cysteinamide
  • Cysteinamide
Identifier
FormulaC3 H8 N2 O S
Molecular Weight120.173
SMILES
PubChem6540253
Formal Charge0
Total Atoms15
Total Chiral Atoms1
Total Bonds14
Total Aromatic Bonds0

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP32245
Sequence
>7AUE_nogp_Chain_R
CYEQLFVSP EVFVTLGVI SLLENILVI VAIAKNKNL HSPMYFFIC 
SLAVADMLV SVSNGSETI VITLLNSFT VNIDNVIDS VICSSLLAS 
ICSLLSIAV DRYFTIFYA LQYHNIMTV KRVGIIISC IWAACTVSG 
ILFIIYSDS SAVIICLIT MFFTMLALM ASLYVHMFL MARLHIKRI 
AVLPGNMKG AITLTILIG VFVVCWAPF FLHLIFYIS CPQNPYCVC 
FMSHFNLYL ILIMCNSII DPLIYALRS QELRKTFKE II


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
6W25APeptideMelanocortinMC4Homo sapiensSHU9119Ca-2.752020-04-29doi.org/10.1126/science.aaz8995
7F53APeptideMelanocortinMC4Homo sapiensα-MSH-Gs/β1/γ232021-11-03doi.org/10.1038/s41422-021-00552-3
7F53 (No Gprot) APeptideMelanocortinMC4Homo sapiensα-MSH-32021-11-03doi.org/10.1038/s41422-021-00552-3
7F54APeptideMelanocortinMC4Homo sapiensAfamelanotide-Gs/β1/γ232021-11-03doi.org/10.1038/s41422-021-00552-3
7F54 (No Gprot) APeptideMelanocortinMC4Homo sapiensAfamelanotide-32021-11-03doi.org/10.1038/s41422-021-00552-3
7F55APeptideMelanocortinMC4Homo sapiensBremelanotide-Gs/β1/γ23.12021-11-03doi.org/10.1038/s41422-021-00552-3
7F55 (No Gprot) APeptideMelanocortinMC4Homo sapiensBremelanotide-3.12021-11-03doi.org/10.1038/s41422-021-00552-3
7F58APeptideMelanocortinMC4Homo sapiensTHIQ-Gs/β1/γ23.12021-11-03doi.org/10.1038/s41422-021-00552-3
7F58 (No Gprot) APeptideMelanocortinMC4Homo sapiensTHIQ-3.12021-11-03doi.org/10.1038/s41422-021-00552-3
7PIUAPeptideMelanocortinMC4Homo sapiensSetmelanotide-Gs/β1/γ22.582021-11-17doi.org/10.1038/s41422-021-00569-8
7PIU (No Gprot) APeptideMelanocortinMC4Homo sapiensSetmelanotide-2.582021-11-17doi.org/10.1038/s41422-021-00569-8
7PIVAPeptideMelanocortinMC4Homo sapiensSetmelanotide-Gs/β1/γ22.862021-11-17doi.org/10.1038/s41422-021-00569-8
7PIV (No Gprot) APeptideMelanocortinMC4Homo sapiensSetmelanotide-2.862021-11-17doi.org/10.1038/s41422-021-00569-8
7AUEAPeptideMelanocortinMC4Homo sapiensSetmelanotide-chim(NtGi1L-Gs)/β1/γ22.972021-04-28doi.org/10.1126/science.abf7958
7AUE (No Gprot) APeptideMelanocortinMC4Homo sapiensSetmelanotide-2.972021-04-28doi.org/10.1126/science.abf7958
8WKYAPeptideMelanocortinMC4Homo sapiensPG-934--2.92024-08-07doi.org/10.1021/acs.jmedchem.3c01822
8WKZAPeptideMelanocortinMC4Homo sapiensSBL-MC-31--3.32024-08-07doi.org/10.1021/acs.jmedchem.3c01822
8QJ2APeptideMelanocortinMC4Homo sapienspN162-Gs3.42024-09-25doi.org/10.1038/s41467-024-50827-7
8QJ2 (No Gprot) APeptideMelanocortinMC4Homo sapienspN162-3.42024-09-25doi.org/10.1038/s41467-024-50827-7
9K3KAPeptideMelanocortinMC4Homo sapiens--chim(NtGi1-Gs)/β1/γ23.122025-08-06doi.org/10.1016/j.str.2025.03.004
9K3K (No Gprot) APeptideMelanocortinMC4Homo sapiens--3.122025-08-06doi.org/10.1016/j.str.2025.03.004




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 7AUE_nogp.zip



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