Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:N924 4.278508
2R:R:F925 6.434529
3R:R:L928 6.0325409
4R:R:H941 6.755405
5R:R:L960 3.84519
6R:R:C963 4.3575417
7R:R:T966 6.35419
8R:R:F967 6.482519
9R:R:F970 9.35518
10R:R:D976 3.135409
11R:R:H981 7.69419
12R:R:F1017 5.1475408
13R:R:W1025 7.854509
14R:R:Q1032 5.548518
15R:R:L1033 2.3459
16R:R:R1048 2.94404
17R:R:P1059 3.934509
18R:R:Y1074 2.884509
19R:R:W1081 5.67536
20R:R:I1089 3.238539
21R:R:I1093 2.2025408
22R:R:L1153 6.265419
23R:R:W1158 8.25528
24R:R:Y1164 6.8725446
25R:R:F1176 5.738529
26R:R:N1180 11.625429
27R:R:F1188 7.1975407
28R:R:F1190 4.852518
29R:R:H1191 5.4575418
30R:R:Y1202 9.8125417
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:D946 R:R:N924 96.46684.04NoYes048
2R:R:L945 R:R:N924 17.23216.87NoYes088
3R:R:N924 R:R:T949 90.93252.92YesNo088
4R:R:F925 R:R:T949 89.35365.19YesNo098
5R:R:F925 R:R:L928 53.92014.87YesYes099
6R:R:F925 R:R:W1158 26.44026.01YesYes298
7R:R:F1176 R:R:F925 20.80046.43YesYes299
8R:R:F1019 R:R:L928 26.67877.31NoYes099
9R:R:L928 R:R:W1081 32.43963.42YesYes096
10R:R:I1093 R:R:M929 11.03732.92YesNo089
11R:R:F1176 R:R:G1161 19.2846.02YesNo099
12R:R:G1161 R:R:M1172 18.05281.75NoNo098
13R:R:M1172 R:R:T1169 10.34556.02NoNo488
14R:R:L945 R:R:Y1174 16.05177.03NoNo089
15R:R:D946 R:R:W950 99.78898.93NoNo047
16R:R:L996 R:R:W950 1003.42NoNo097
17R:R:I953 R:R:L996 48.99552.85NoNo099
18R:R:I953 R:R:L957 48.81192.85NoNo099
19R:R:E992 R:R:L957 98.34677.95NoNo099
20R:R:E992 R:R:S956 97.58468.62NoNo099
21R:R:L960 R:R:S956 96.81473YesNo099
22R:R:C963 R:R:L960 92.51933.17YesYes179
23R:R:C963 R:R:F967 84.74956.98YesYes179
24R:R:F967 R:R:H981 69.467711.31YesYes199
25R:R:H981 R:R:L1153 31.80253.86YesYes199
26R:R:H1191 R:R:L1153 28.824410.29YesYes189
27R:R:F1190 R:R:H1191 22.19575.66YesYes188
28R:R:F1190 R:R:L1194 13.32762.44YesNo089
29R:R:I1189 R:R:L1194 11.87762.85NoNo079
30R:R:I1189 R:R:M1185 10.41982.92NoNo077
31R:R:L993 R:R:L996 51.24292.77NoNo059
32R:R:L957 R:R:L993 50.32442.77NoNo095
33R:R:F967 R:R:T966 16.45433.89YesYes199
34R:R:I980 R:R:W1025 19.31927.05NoYes099
35R:R:E1029 R:R:I980 21.32035.47NoNo099
36R:R:E1029 R:R:H981 19.956211.08NoYes199
37R:R:H981 R:R:R977 19.24494.51YesNo199
38R:R:Q1032 R:R:R977 16.82174.67YesNo189
39R:R:A991 R:R:F1019 27.57374.16NoNo089
40R:R:A991 R:R:F1018 26.33864.16NoNo088
41R:R:D1085 R:R:R1083 10.28319.06NoNo085
42R:R:D1085 R:R:T1086 11.72137.23NoNo088
43R:R:F1088 R:R:T1086 13.151711.67NoNo088
44R:R:F1088 R:R:S1073 18.79546.61NoNo089
45R:R:L1082 R:R:S1073 26.77253NoNo089
46R:R:L1082 R:R:W1081 24.4864.56NoYes386
47R:R:F1017 R:R:F1018 22.58665.36YesNo088
48R:R:F1017 R:R:P1059 14.87147.22YesYes089
49R:R:F1023 R:R:W1158 25.66254.01NoYes098
50R:R:F1023 R:R:I1099 23.28622.51NoNo095
51R:R:F1027 R:R:I1099 18.43983.77NoNo095
52R:R:F1027 R:R:V1031 12.2025.24NoNo099
53R:R:F1106 R:R:V1031 11.09593.93NoNo069
54R:R:F1106 R:R:G1030 10.00943.01NoNo065
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


PDB Summary
PDB 7WYB_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 2.85
Number of Linked Nodes 244
Number of Links 266
Number of Hubs 30
Number of Links mediated by Hubs 111
Number of Communities 5
Number of Nodes involved in Communities 40
Number of Links involved in Communities 53
Path Summary
Number Of Nodes in MetaPath 55
Number Of Links MetaPath 54
Number of Shortest Paths 40745
Length Of Smallest Path 3
Average Path Length 17.0646
Length of Longest Path 35
Minimum Path Strength 1.33
Average Path Strength 5.28109
Maximum Path Strength 16.29
Minimum Path Correlation 0.71
Average Path Correlation 0.920872
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 3.57143
Average % Of Corr. Nodes 41.1958
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 35.8745
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function• cation binding   • ion binding   • binding   • calcium ion binding   • metal ion binding   • small molecule binding   • molecular transducer activity   • G protein-coupled receptor activity   • transmembrane signaling receptor activity   • signaling receptor activity   • molecular condensate scaffold activity   • protein-macromolecule adaptor activity   • molecular adaptor activity   • cell adhesion molecule binding   • protein binding   • cell adhesion mediator activity   • carbohydrate binding   • developmental process   • multicellular organismal process   • nervous system development   • excitatory synapse assembly   • cellular component organization   • cellular component biogenesis   • multicellular organism development   • cell junction organization   • cellular component assembly   • cell junction assembly   • anatomical structure development   • cellular process   • synapse organization   • cellular component organization or biogenesis
Gene OntologyBiological Process• developmental process   • multicellular organismal process   • nervous system development   • excitatory synapse assembly   • cellular component organization   • cellular component biogenesis   • multicellular organism development   • cell junction organization   • cellular component assembly   • cell junction assembly   • anatomical structure development   • cellular process   • synapse organization   • cellular component organization or biogenesis   • synapse assembly   • system development   • positive regulation of nervous system development   • regulation of cellular process   • positive regulation of cellular component organization   • regulation of cellular component organization   • regulation of developmental process   • positive regulation of biological process   • regulation of nervous system development   • positive regulation of developmental process   • regulation of multicellular organismal process   • regulation of synapse structure or activity   • regulation of synapse assembly   • regulation of biological quality   • positive regulation of cellular process   • regulation of multicellular organismal development   • regulation of biological process   • positive regulation of cellular component biogenesis   • biological regulation   • regulation of cellular component biogenesis   • regulation of cell junction assembly   • positive regulation of cell junction assembly   • regulation of synapse organization   • positive regulation of multicellular organismal process   • positive regulation of synapse assembly   • cellular response to stimulus   • response to stimulus   • signaling   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cell communication   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • signal transduction   • cell surface receptor signaling pathway   • Rho-activating G protein-coupled receptor signaling pathway   • behavior   • locomotory behavior   • locomotion involved in locomotory behavior   • locomotion   • neuron migration   • cellular developmental process   • generation of neurons   • neurogenesis   • cell differentiation   • cell migration   • cell motility   • response to chemical   • response to oxygen-containing compound   • response to nitrogen compound   • response to cocaine   • response to alkaloid   • maintenance of synapse structure   • postsynapse organization   • cellular component maintenance   • cell junction maintenance   • organelle organization   • maintenance of postsynaptic specialization structure   • postsynaptic density organization   • postsynaptic specialization organization   • cell periphery   • postsynapse   • cellular anatomical structure   • postsynaptic membrane   • synapse   • cell junction   • membrane   • plasma membrane   • plasma membrane region   • synaptic membrane   • cell-cell junction   • anchoring junction   • glutamatergic synapse   • Schaffer collateral - CA1 synapse
Gene OntologyCellular Component• cell periphery   • postsynapse   • cellular anatomical structure   • postsynaptic membrane   • synapse   • cell junction   • membrane   • plasma membrane   • plasma membrane region   • synaptic membrane   • cell-cell junction   • anchoring junction   • glutamatergic synapse   • Schaffer collateral - CA1 synapse   • axon   • cell projection   • neuron projection   • plasma membrane bounded cell projection   • protein binding   • binding   • G-protein beta-subunit binding   • fibroblast proliferation   • cell population proliferation   • cellular process   • cellular response to nitrogen compound   • cellular response to stimulus   • response to dopamine   • regulation of cellular process   • response to stimulus   • signaling   • cellular response to dopamine   • response to monoamine   • cell communication   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • signal transduction   • regulation of biological process   • G protein-coupled dopamine receptor signaling pathway   • biological regulation   • response to oxygen-containing compound   • response to nitrogen compound   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cellular response to oxygen-containing compound   • cellular response to chemical stimulus   • cellular response to monoamine stimulus   • response to chemical   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • response to ketone   • response to prostaglandin   • response to lipid   • response to endogenous stimulus   • response to alcohol   • cellular response to prostaglandin stimulus   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to alcohol   • response to hormone   • cellular response to lipid   • response to prostaglandin E   • cellular response to ketone   • cellular response to hormone stimulus   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cytoplasmic side of plasma membrane   • GTPase complex   • extrinsic component of membrane   • extrinsic component of cytoplasmic side of plasma membrane   • extracellular exosome   • membrane-bounded organelle   • extracellular vesicle   • extracellular organelle   • extracellular region   • organelle   • extracellular space   • vesicle   • extracellular membrane-bounded organelle   • enzyme binding   • GTPase binding   • protein-containing complex binding   • pyrophosphatase activity   • GTPase activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • signaling receptor complex adaptor activity   • protein-macromolecule adaptor activity   • molecular adaptor activity   • signaling adaptor activity   • multicellular organismal process   • system process   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of taste   • developmental process   • sensory organ development   • eye development   • animal organ development   • retina development in camera-type eye   • visual system development   • multicellular organism development   • camera-type eye development   • anatomical structure development   • sensory system development   • system development   • small GTPase-mediated signal transduction   • Ras protein signal transduction   • intracellular signal transduction   • intracellular signaling cassette   • phospholipase C-activating G protein-coupled receptor signaling pathway   • synaptic signaling   • cellular response to acetylcholine   • cell-cell signaling   • acetylcholine receptor signaling pathway   • postsynaptic signal transduction   • G protein-coupled acetylcholine receptor signaling pathway   • response to acetylcholine   • non-motile cilium   • 9+0 non-motile cilium   • cilium   • photoreceptor disc membrane   • photoreceptor outer segment   • photoreceptor cell cilium   • organelle membrane   • intracellular anatomical structure   • cytoplasm   • cytosol   • vacuolar membrane   • lytic vacuole   • vacuole   • intracellular membrane-bounded organelle   • intracellular organelle   • lytic vacuole membrane   • bounding membrane of organelle   • lysosomal membrane   • lysosome   • D2 dopamine receptor binding   • signaling receptor binding   • G protein-coupled receptor binding   • dopamine receptor binding   • enzyme regulator activity   • adenylate cyclase inhibitor activity   • cyclase regulator activity   • molecular function inhibitor activity   • cyclase inhibitor activity   • molecular function regulator activity   • enzyme inhibitor activity   • adenylate cyclase regulator activity   • guanyl nucleotide binding   • GTP binding   • nucleotide binding   • guanyl ribonucleotide binding   • purine ribonucleotide binding   • purine ribonucleoside triphosphate binding   • nucleoside phosphate binding   • ion binding   • purine nucleotide binding   • anion binding   • heterocyclic compound binding   • carbohydrate derivative binding   • ribonucleotide binding   • small molecule binding   • cation binding   • magnesium ion binding   • metal ion binding   • GDP binding   • G protein-coupled serotonin receptor binding   • G-protein beta/gamma-subunit complex binding   • G protein activity   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • response to peptide hormone   • cell division   • leukocyte migration   • immune system process   • mononuclear cell migration   • lymphocyte migration   • cell migration   • T cell migration   • cell motility   • regulation of steroid biosynthetic process   • regulation of cholesterol biosynthetic process   • regulation of cholesterol metabolic process   • steroid metabolic process   • regulation of lipid metabolic process   • sterol metabolic process   • positive regulation of biological process   • cholesterol metabolic process   • lipid biosynthetic process   • alcohol metabolic process   • regulation of primary metabolic process   • positive regulation of metabolic process   • regulation of small molecule metabolic process   • positive regulation of biosynthetic process   • positive regulation of lipid metabolic process   • small molecule metabolic process   • steroid biosynthetic process   • positive regulation of cellular process   • regulation of biosynthetic process   • secondary alcohol biosynthetic process   • regulation of alcohol biosynthetic process   • small molecule biosynthetic process   • regulation of steroid metabolic process   • cholesterol biosynthetic process   • positive regulation of cholesterol biosynthetic process   • primary metabolic process   • secondary alcohol metabolic process   • positive regulation of steroid biosynthetic process   • biosynthetic process   • sterol biosynthetic process   • positive regulation of lipid biosynthetic process   • regulation of sterol biosynthetic process   • alcohol biosynthetic process   • positive regulation of cholesterol metabolic process   • positive regulation of steroid metabolic process   • metabolic process   • regulation of lipid biosynthetic process   • positive regulation of small molecule metabolic process   • regulation of metabolic process   • positive regulation of alcohol biosynthetic process   • positive regulation of sterol biosynthetic process   • lipid metabolic process   • negative regulation of protein transport   • regulation of localization   • establishment of protein localization   • nitrogen compound transport   • negative regulation of biological process   • negative regulation of transport   • localization   • negative regulation of secretion   • negative regulation of hormone secretion   • negative regulation of secretion by cell   • intracellular protein localization   • regulation of biological quality   • regulation of peptide hormone secretion   • negative regulation of peptide hormone secretion   • regulation of hormone levels   • establishment of protein localization to extracellular region   • negative regulation of establishment of protein localization   • protein secretion   • establishment of localization   • regulation of protein secretion   • regulation of secretion   • negative regulation of protein secretion   • regulation of hormone secretion   • regulation of protein localization   • regulation of peptide secretion   • transport   • negative regulation of signaling   • hormone secretion   • negative regulation of cell communication   • protein localization to extracellular region   • negative regulation of peptide secretion   • peptide secretion   • regulation of secretion by cell   • secretion by cell   • amide transport   • signal release   • negative regulation of cellular process   • negative regulation of protein localization   • regulation of signaling   • regulation of transport   • secretion   • regulation of peptide transport   • regulation of establishment of protein localization   • export from cell   • regulation of protein transport   • peptide transport   • negative regulation of insulin secretion   • protein transport   • regulation of insulin secretion   • peptide hormone secretion   • macromolecule localization   • hormone transport   • regulation of cell communication   • insulin secretion   • regulation of cytoskeleton organization   • regulation of cellular component organization   • microtubule cytoskeleton organization   • regulation of mitotic spindle organization   • mitotic cell cycle   • cellular component organization   • cell cycle   • cellular component organization or biogenesis   • regulation of cell cycle   • microtubule cytoskeleton organization involved in mitosis   • spindle organization   • cell cycle process   • regulation of cell cycle process   • regulation of microtubule-based process   • regulation of spindle organization   • regulation of organelle organization   • mitotic spindle organization   • organelle organization   • mitotic cell cycle process   • microtubule-based process   • cytoskeleton organization   • regulation of microtubule cytoskeleton organization   • positive regulation of protein localization to cell periphery   • protein localization to cell periphery   • positive regulation of protein localization to cell cortex   • regulation of protein localization to cell periphery   • regulation of protein localization to cell cortex   • positive regulation of protein localization   • protein localization to cell cortex   • cellular response to forskolin   • response to forskolin   • midbody   • nucleus   • membrane-enclosed lumen   • intracellular membraneless organelle   • nucleolus   • intracellular organelle lumen   • organelle lumen   • membraneless organelle   • nuclear lumen   • cell cortex   • centrosome   • microtubule organizing center   • cytoskeleton   • microtubule cytoskeleton   • centriolar satellite   • nucleoplasm   • Golgi apparatus   • endomembrane system   • ciliary basal body
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain   • Ras-like P-loop GTPases
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain   • Ras-like P-loop GTPases
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtQ80TS3
Sequence
>7WYB_nogp_Chain_R
TNFAVLMAH VEVKHSDAV HDLLLDVIT WVGILLSLV CLLICIFTF 
CFFRGLQSD RNTIHKNLC ISLFVAELL FLIGINRTD QPIACAVFA 
ALLHFFFLA AFTWMFLEG VQLYIMLVE VFESEHSRR KYFYLVGYG 
MPALIVAVS AAVDYRSYG TDKVCWLRL DTYFIWSFI GPATLIIML 
NVIFLGIAL YKMFHHTWV IGAIALLCL LGLTWAFGL MYINESTVI 
MAYLFTIFN SLQGMFIFI FHCVLQKKV RKEYGKCLR T


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
7WY5B2AdhesionAdhesionADGRL3Mus musculus--chim(NtGi1-Gs-CtGq)/β1/γ22.832022-10-26doi.org/10.1016/j.molcel.2022.10.009
7WY5 (No Gprot) B2AdhesionAdhesionADGRL3Mus musculus--2.832022-10-26doi.org/10.1016/j.molcel.2022.10.009
7WY8B2AdhesionAdhesionADGRL3Mus musculus--chim(NtGi1-Gs)/β1/γ22.832022-10-26doi.org/10.1016/j.molcel.2022.10.009
7WY8 (No Gprot) B2AdhesionAdhesionADGRL3Mus musculus--2.832022-10-26doi.org/10.1016/j.molcel.2022.10.009
7WYBB2AdhesionAdhesionADGRL3Mus musculus--Gi1/β1/γ22.972022-10-26doi.org/10.1016/j.molcel.2022.10.009
7WYB (No Gprot) B2AdhesionAdhesionADGRL3Mus musculus--2.972022-10-26doi.org/10.1016/j.molcel.2022.10.009
7X10B2AdhesionAdhesionADGRL3Mus musculus--chim(NtGi1-G12)/β1/γ22.932022-10-26doi.org/10.1016/j.molcel.2022.10.009
7X10 (No Gprot) B2AdhesionAdhesionADGRL3Mus musculus--2.932022-10-26doi.org/10.1016/j.molcel.2022.10.009
7SF7B2AdhesionAdhesionADGRL3Homo sapiens--chim(NtGi2-G13)/β1/γ22.92022-04-27doi.org/10.1038/s41586-022-04575-7
7SF7 (No Gprot) B2AdhesionAdhesionADGRL3Homo sapiens--2.92022-04-27doi.org/10.1038/s41586-022-04575-7
8JMTB2AdhesionAdhesionADGRL3Homo sapiens---3.32023-09-06doi.org/10.1038/s41589-023-01389-0




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 7WYB_nogp.zip



You can click to copy the link of this page to easily come back here later

or use this QR code to link and share this page.



You can also  read or  download a guide explaining the meaning of all files and numerical data.