Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:?1 5.1391010
2R:R:F25 5.14505
3R:R:F28 5.4825408
4R:R:S54 4.42468
5R:R:R71 1.865407
6R:R:L81 4.8025409
7R:R:F82 5.83409
8R:R:D85 5.53409
9R:R:F88 6.0325417
10R:R:W100 4.5175455
11R:R:W104 9.27429
12R:R:L106 2.9975406
13R:R:V124 4.9725407
14R:R:M137 4.4425408
15R:R:L184 4.4525402
16R:R:I191 4.96404
17R:R:W198 13.9825407
18R:R:W207 5.7775406
19R:R:D208 4.58515
20R:R:F211 6.576515
21R:R:N215 4.7925416
22R:R:Y227 4.21509
23R:R:Q252 2.465402
24R:R:L269 3.8825408
25R:R:M276 4.145408
26R:R:W277 10.7925409
27R:R:L296 3.586535
28R:R:F304 7.83544
29R:R:L320 3.52408
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:?1 R:R:I287 50.86276.5YesNo005
2R:R:F25 R:R:I287 55.27046.28YesNo055
3R:R:F25 R:R:P26 39.05567.22YesNo055
4R:R:P26 R:R:S29 37.78941.78NoNo059
5R:R:I193 R:R:S29 36.51354.64NoNo049
6R:R:I193 R:R:Q182 13.39239.61NoNo042
7R:R:Q182 R:R:R24 10.48283.5NoNo025
8R:R:F25 R:R:I298 11.92317.54YesNo053
9L:L:?1 R:R:F88 29.62164.62YesYes107
10R:R:F311 R:R:F88 25.67788.57NoYes077
11R:R:F311 R:R:V307 24.67263.93NoNo075
12R:R:F28 R:R:V307 23.68185.24YesNo085
13R:R:F28 R:R:F304 15.21923.22YesYes084
14R:R:I191 R:R:I193 23.22271.47YesNo044
15R:R:I191 R:R:L184 17.63577.14YesYes042
16R:R:L184 R:R:V31 13.3447.45YesNo026
17R:R:E102 R:R:V31 11.89411.43NoNo046
18R:R:E102 R:R:R36 10.434513.96NoNo044
19R:R:F304 R:R:L47 10.31854.87YesNo046
20L:L:?1 R:R:W277 99.72455.19YesYes009
21R:R:N313 R:R:W277 10022.6NoYes099
22R:R:M276 R:R:N313 99.95658.41YesNo089
23R:R:L316 R:R:M276 98.98992.83NoYes068
24R:R:L316 R:R:L320 98.84012.77NoYes068
25R:R:L269 R:R:L320 98.33265.54YesYes088
26R:R:L269 R:R:Y321 53.67553.52YesNo089
27R:R:L129 R:R:Y321 48.3647.03NoNo089
28R:R:L129 R:R:L81 47.18965.54NoYes089
29R:R:L81 R:R:N317 27.08424.12YesNo099
30R:R:D85 R:R:N317 25.74556.73YesNo099
31R:R:D85 R:R:S314 13.26184.42YesNo099
32R:R:D85 R:R:N58 10.38138.08YesNo099
33R:R:L269 R:R:Y227 60.71723.52YesYes089
34R:R:R136 R:R:Y227 28.61635.14NoYes099
35R:R:R136 R:R:V132 38.01173.92NoNo098
36R:R:L77 R:R:V132 36.09782.98NoNo078
37R:R:E135 R:R:L77 34.17435.3NoNo087
38R:R:A73 R:R:E135 30.29824.53NoNo068
39R:R:A73 R:R:R155 18.4388.3NoNo066
40R:R:C76 R:R:R155 16.42744.18NoNo056
41R:R:C76 R:R:L79 14.40723.17NoNo055
42R:R:R136 R:R:Y321 27.74643.09NoNo099
43R:R:L79 R:R:V65 12.37742.98NoNo057
44R:R:A75 R:R:V65 10.33781.7NoNo087
45R:R:L81 R:R:T128 14.68755.9YesNo098
46R:R:N80 R:R:T128 13.26187.31NoNo098
47R:R:N80 R:R:W163 10.38136.78NoNo099
48R:R:F115 R:R:F28 10.52634.29NoYes058
49R:R:F115 R:R:L114 17.35543.65NoNo056
50R:R:L114 R:R:L94 14.90995.54NoNo065
51R:R:L106 R:R:L94 12.49344.15YesNo065
52L:L:?1 R:R:E204 30.64133.02YesNo005
53R:R:E204 R:R:W198 35.044235.98NoYes057
54R:R:L196 R:R:W198 31.443610.25NoYes057
55R:R:F177 R:R:L196 31.50169.74NoNo055
56R:R:F115 R:R:F177 12.96716.08NoNo055
57R:R:C194 R:R:F177 19.00834.19NoNo095
58R:R:C194 R:R:W104 13.000816.98NoYes299
59R:R:G107 R:R:L106 11.66691.71NoYes086
60L:L:?1 R:R:F211 15.17575.55YesYes105
61R:R:S133 R:R:Y227 18.34137.63NoYes089
62R:R:S133 R:R:S226 16.98813.26NoNo085
63R:R:M137 R:R:S226 15.62524.6YesNo085
64R:R:M137 R:R:V138 10.07683.04YesNo084
65R:R:A73 R:R:P150 10.33781.87NoNo066
66L:L:?1 R:R:D208 13.21837.21YesYes105
67R:R:F309 R:R:M276 10.82113.73NoYes078
68R:R:I223 R:R:Y227 12.87032.42NoYes089
69R:R:L266 R:R:Y227 31.20682.34NoYes089
70R:R:L231 R:R:L266 27.47574.15NoNo068
71R:R:F263 R:R:L231 26.18053.65NoNo076
72R:R:D259 R:R:F263 23.6485.97NoNo077
73R:R:D259 R:R:R238 21.009113.1NoNo074
74R:R:L241 R:R:R238 19.68491.21NoNo054
75R:R:L241 R:R:Y247 15.62522.34NoNo054
76R:R:H251 R:R:Y247 14.25264.36NoNo024
77R:R:H251 R:R:S248 12.870312.55NoNo026
78R:R:Q252 R:R:S248 10.07681.44YesNo026
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:?1 R:R:F27 4.62 1 Yes No 0 5 0 1
L:L:?1 R:R:F88 4.62 1 Yes Yes 0 7 0 1
L:L:?1 R:R:M118 6.44 1 Yes No 0 7 0 1
L:L:?1 R:R:G122 3.9 1 Yes No 0 7 0 1
L:L:?1 R:R:E204 3.02 1 Yes No 0 5 0 1
L:L:?1 R:R:D208 7.21 1 Yes Yes 0 5 0 1
L:L:?1 R:R:F211 5.55 1 Yes Yes 0 5 0 1
L:L:?1 R:R:W277 5.19 1 Yes Yes 0 9 0 1
L:L:?1 R:R:I284 4.34 1 Yes No 0 5 0 1
L:L:?1 R:R:I287 6.5 1 Yes No 0 5 0 1
R:R:F25 R:R:I287 6.28 0 Yes No 5 5 2 1
R:R:F25 R:R:F303 3.22 0 Yes No 5 4 2 2
R:R:F27 R:R:F303 6.43 0 No No 5 4 1 2
R:R:F88 R:R:S121 7.93 1 Yes No 7 8 1 2
R:R:F88 R:R:G122 3.01 1 Yes No 7 7 1 1
R:R:F311 R:R:F88 8.57 0 No Yes 7 7 2 1
R:R:A91 R:R:M118 3.22 0 No No 6 7 2 1
R:R:F211 R:R:T119 3.89 1 Yes No 5 5 1 2
R:R:F211 R:R:S123 3.96 1 Yes No 5 6 1 2
R:R:N215 R:R:S123 4.47 1 Yes No 6 6 2 2
R:R:I126 R:R:W277 11.74 0 No Yes 8 9 2 1
R:R:E204 R:R:W198 35.98 0 No Yes 5 7 1 2
R:R:W198 R:R:W207 4.69 0 Yes Yes 7 6 2 2
R:R:E204 R:R:N291 3.94 0 No No 5 2 1 2
R:R:D208 R:R:W207 3.35 1 Yes Yes 5 6 1 2
R:R:F211 R:R:W207 11.02 1 Yes Yes 5 6 1 2
R:R:D208 R:R:I284 4.2 1 Yes No 5 5 1 1
R:R:D208 R:R:L288 5.43 1 Yes No 5 4 1 2
R:R:F211 R:R:N215 8.46 1 Yes Yes 5 6 1 2
R:R:T310 R:R:W277 3.64 0 No Yes 8 9 2 1
R:R:N313 R:R:W277 22.6 0 No Yes 9 9 2 1
R:R:I287 R:R:N291 2.83 0 No No 5 2 1 2
R:R:D208 R:R:L285 2.71 1 Yes No 5 6 1 2

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 8H4L_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 2.77
Number of Linked Nodes 264
Number of Links 274
Number of Hubs 29
Number of Links mediated by Hubs 115
Number of Communities 6
Number of Nodes involved in Communities 24
Number of Links involved in Communities 27
Path Summary
Number Of Nodes in MetaPath 79
Number Of Links MetaPath 78
Number of Shortest Paths 40959
Length Of Smallest Path 3
Average Path Length 15.0861
Length of Longest Path 36
Minimum Path Strength 1.295
Average Path Strength 6.00973
Maximum Path Strength 23.115
Minimum Path Correlation 0.7
Average Path Correlation 0.945065
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 4.16667
Average % Of Corr. Nodes 60.4698
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 35.7066
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process• fibroblast proliferation   • cell population proliferation   • cellular process   • cellular response to nitrogen compound   • cellular response to stimulus   • response to dopamine   • regulation of cellular process   • response to stimulus   • signaling   • cellular response to dopamine   • response to monoamine   • cell communication   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • signal transduction   • regulation of biological process   • G protein-coupled dopamine receptor signaling pathway   • biological regulation   • response to oxygen-containing compound   • response to nitrogen compound   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cellular response to oxygen-containing compound   • cellular response to chemical stimulus   • cellular response to monoamine stimulus   • response to chemical   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • response to ketone   • response to prostaglandin   • response to lipid   • response to endogenous stimulus   • response to alcohol   • cellular response to prostaglandin stimulus   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to alcohol   • response to hormone   • cellular response to lipid   • response to prostaglandin E   • cellular response to ketone   • cellular response to hormone stimulus   • cellular anatomical structure   • membrane   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • plasma membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cell periphery   • cytoplasmic side of plasma membrane   • GTPase complex
Gene OntologyCellular Component• cellular anatomical structure   • membrane   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • plasma membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cell periphery   • cytoplasmic side of plasma membrane   • GTPase complex   • extrinsic component of membrane   • extrinsic component of cytoplasmic side of plasma membrane   • extracellular exosome   • membrane-bounded organelle   • extracellular vesicle   • extracellular organelle   • extracellular region   • organelle   • extracellular space   • vesicle   • extracellular membrane-bounded organelle   • synapse   • cell junction   • molecular transducer activity   • G protein-coupled receptor activity   • transmembrane signaling receptor activity   • signaling receptor activity   • protein binding   • binding   • arrestin family protein binding   • fatty acid binding   • organic acid binding   • ion binding   • anion binding   • lipid binding   • carboxylic acid binding   • monocarboxylic acid binding   • small molecule binding   • taste receptor activity   • positive regulation of cytosolic calcium ion concentration   • biological regulation   • regulation of biological quality   • regulation of localization   • nitrogen compound transport   • regulation of hormone secretion   • regulation of cellular process   • regulation of peptide secretion   • transport   • signaling   • negative regulation of signaling   • negative regulation of biological process   • negative regulation of transport   • hormone secretion   • somatostatin secretion   • negative regulation of cell communication   • cell communication   • negative regulation of peptide secretion   • negative regulation of somatostatin secretion   • peptide secretion   • localization   • secretion by cell   • regulation of secretion by cell   • negative regulation of secretion   • amide transport   • signal release   • negative regulation of hormone secretion   • negative regulation of cellular process   • negative regulation of secretion by cell   • regulation of peptide hormone secretion   • regulation of biological process   • regulation of signaling   • negative regulation of peptide hormone secretion   • secretion   • regulation of transport   • regulation of hormone levels   • regulation of peptide transport   • cell-cell signaling   • export from cell   • establishment of localization   • regulation of secretion   • peptide transport   • regulation of somatostatin secretion   • peptide hormone secretion   • hormone transport   • regulation of cell communication   • cellular process   • cellular response to stimulus   • positive regulation of cell communication   • positive regulation of signal transduction   • response to stimulus   • positive regulation of biological process   • regulation of signal transduction   • intracellular signal transduction   • positive regulation of response to stimulus   • positive regulation of ERK1 and ERK2 cascade   • regulation of intracellular signal transduction   • intracellular signaling cassette   • signal transduction   • positive regulation of cellular process   • positive regulation of MAPK cascade   • positive regulation of intracellular signal transduction   • regulation of MAPK cascade   • regulation of response to stimulus   • MAPK cascade   • ERK1 and ERK2 cascade   • regulation of ERK1 and ERK2 cascade   • positive regulation of signaling   • negative regulation of programmed cell death   • regulation of apoptotic process   • regulation of programmed cell death   • cell death   • negative regulation of apoptotic process   • apoptotic process   • programmed cell death   • regulation of defense response   • regulation of response to external stimulus   • negative regulation of inflammatory response   • defense response   • negative regulation of response to stimulus   • response to external stimulus   • regulation of inflammatory response   • response to stress   • negative regulation of response to external stimulus   • regulation of response to stress   • negative regulation of defense response   • inflammatory response   • hexose transmembrane transport   • carbohydrate transport   • transmembrane transport   • regulation of transmembrane transport   • D-glucose transmembrane transport   • regulation of D-glucose transmembrane transport   • monosaccharide transmembrane transport   • carbohydrate transmembrane transport   • multicellular organismal process   • interleukin-1 production   • regulation of interleukin-1 beta production   • negative regulation of interleukin-1 beta production   • negative regulation of interleukin-1 production   • regulation of cytokine production   • cytokine production   • regulation of multicellular organismal process   • negative regulation of macromolecule metabolic process   • regulation of biosynthetic process   • regulation of interleukin-1 production   • negative regulation of metabolic process   • negative regulation of cytokine production   • regulation of macromolecule metabolic process   • gene expression   • macromolecule biosynthetic process   • regulation of gene expression   • negative regulation of gene expression   • biosynthetic process   • negative regulation of biosynthetic process   • interleukin-1 beta production   • negative regulation of macromolecule biosynthetic process   • regulation of macromolecule biosynthetic process   • metabolic process   • macromolecule metabolic process   • negative regulation of multicellular organismal process   • regulation of metabolic process   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • ghrelin secretion   • homeostatic process   • adaptive thermogenesis   • positive regulation of metabolic process   • multicellular organismal-level homeostasis   • regulation of cold-induced thermogenesis   • cold-induced thermogenesis   • temperature homeostasis   • positive regulation of cold-induced thermogenesis   • positive regulation of multicellular organismal process   • developmental process   • regulation of osteoblast differentiation   • cellular developmental process   • regulation of developmental process   • regulation of cell differentiation   • osteoblast differentiation   • positive regulation of developmental process   • positive regulation of osteoblast differentiation   • ossification   • positive regulation of cell differentiation   • cell differentiation   • phospholipase C-activating G protein-coupled receptor signaling pathway   • fat cell differentiation   • positive regulation of brown fat cell differentiation   • positive regulation of fat cell differentiation   • regulation of brown fat cell differentiation   • brown fat cell differentiation   • regulation of fat cell differentiation   • glucagon secretion   • positive regulation of secretion by cell   • positive regulation of hormone secretion   • positive regulation of secretion   • regulation of glucagon secretion   • positive regulation of peptide secretion   • positive regulation of glucagon secretion   • positive regulation of peptide hormone secretion   • positive regulation of transport   • white fat cell differentiation   • cell projection   • cilium   • plasma membrane bounded cell projection   • intracellular organelle   • intracellular anatomical structure   • intracellular membrane-bounded organelle   • intracellular vesicle   • cytoplasmic vesicle   • cytoplasm   • endocytic vesicle   • ciliary membrane   • bounding membrane of organelle   • plasma membrane region   • organelle membrane   • cell projection membrane   • vacuolar membrane   • lytic vacuole   • vacuole   • lytic vacuole membrane   • lysosomal membrane   • lysosome   • endosome membrane   • endosome   • endomembrane system   • cytoplasmic vesicle membrane   • vesicle membrane   • intracellular membraneless organelle   • ciliary basal body   • microtubule organizing center   • cytoskeleton   • membraneless organelle   • microtubule cytoskeleton   • enzyme binding   • GTPase binding   • protein-containing complex binding   • pyrophosphatase activity   • GTPase activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • signaling receptor complex adaptor activity   • protein-macromolecule adaptor activity   • molecular adaptor activity   • signaling adaptor activity   • system process   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of taste   • sensory organ development   • eye development   • animal organ development   • retina development in camera-type eye   • visual system development   • multicellular organism development   • camera-type eye development   • anatomical structure development   • sensory system development   • system development   • cell population proliferation   • response to ketone   • response to prostaglandin   • response to lipid   • response to endogenous stimulus   • response to alcohol   • cellular response to prostaglandin stimulus   • response to oxygen-containing compound   • cellular response to oxygen-containing compound   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to chemical stimulus   • cellular response to alcohol   • response to hormone   • response to chemical   • cellular response to lipid   • response to prostaglandin E   • cellular response to ketone   • cellular response to hormone stimulus   • small GTPase-mediated signal transduction   • Ras protein signal transduction   • cellular response to nitrogen compound   • response to dopamine   • cellular response to dopamine   • response to monoamine   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • G protein-coupled dopamine receptor signaling pathway   • response to nitrogen compound   • cellular response to monoamine stimulus   • synaptic signaling   • cellular response to acetylcholine   • acetylcholine receptor signaling pathway   • postsynaptic signal transduction   • G protein-coupled acetylcholine receptor signaling pathway   • response to acetylcholine   • non-motile cilium   • 9+0 non-motile cilium   • neuron projection   • photoreceptor disc membrane   • photoreceptor outer segment   • photoreceptor cell cilium   • cytosol   • guanyl nucleotide binding   • GTP binding   • nucleotide binding   • guanyl ribonucleotide binding   • purine ribonucleotide binding   • purine ribonucleoside triphosphate binding   • nucleoside phosphate binding   • purine nucleotide binding   • heterocyclic compound binding   • carbohydrate derivative binding   • ribonucleotide binding   • D1 dopamine receptor binding   • signaling receptor binding   • G protein-coupled receptor binding   • dopamine receptor binding   • G-protein beta/gamma-subunit complex binding   • G protein activity   • molecular function regulator activity   • enzyme regulator activity   • cyclase regulator activity   • enzyme activator activity   • cyclase activator activity   • molecular function activator activity   • adenylate cyclase regulator activity   • adenylate cyclase activator activity   • cation binding   • metal ion binding   • D2 dopamine receptor binding   • adenylate cyclase inhibitor activity   • molecular function inhibitor activity   • cyclase inhibitor activity   • enzyme inhibitor activity   • magnesium ion binding   • GDP binding   • G protein-coupled serotonin receptor binding   • epithelium development   • ectodermal placode morphogenesis   • epidermis development   • molting cycle process   • hair cycle   • hair follicle placode formation   • tissue development   • ectodermal placode formation   • anatomical structure morphogenesis   • skin development   • skin epidermis development   • hair follicle development   • molting cycle   • anatomical structure formation involved in morphogenesis   • ectodermal placode development   • hair cycle process   • sensory perception of smell   • response to peptide hormone   • cellular response to peptide hormone stimulus   • response to glucagon   • cellular response to glucagon stimulus   • skeletal system development   • bone development   • regulation of body fluid levels   • wound healing   • homotypic cell-cell adhesion   • cell activation   • hemostasis   • platelet aggregation   • blood coagulation   • cell adhesion   • cell-cell adhesion   • coagulation   • response to wounding   • platelet activation   • response to fluid shear stress   • vascular endothelial cell response to laminar fluid shear stress   • response to laminar fluid shear stress   • cellular response to stress   • cellular response to laminar fluid shear stress   • vascular endothelial cell response to fluid shear stress   • cellular response to fluid shear stress   • cognition   • developmental growth   • growth   • establishment of protein localization   • regulation of protein localization   • protein localization to extracellular region   • intracellular protein localization   • regulation of establishment of protein localization   • establishment of protein localization to extracellular region   • regulation of protein transport   • protein secretion   • regulation of protein secretion   • protein transport   • regulation of insulin secretion   • macromolecule localization   • insulin secretion   • adenylate cyclase-activating adrenergic receptor signaling pathway   • adrenergic receptor signaling pathway   • cellular localization   • establishment of localization in cell   • intracellular transport   • inflammatory response to antigenic stimulus   • regulation of immune system process   • negative regulation of inflammatory response to antigenic stimulus   • immune response   • negative regulation of immune response   • regulation of inflammatory response to antigenic stimulus   • negative regulation of immune system process   • immune system process   • regulation of immune response   • positive regulation of adenylate cyclase activity   • positive regulation of molecular function   • regulation of molecular function   • positive regulation of cyclase activity   • activation of adenylate cyclase activity   • regulation of adenylate cyclase activity   • regulation of catalytic activity   • positive regulation of catalytic activity   • positive regulation of lyase activity   • renal system process   • chemical homeostasis   • multicellular organismal-level water homeostasis   • multicellular organismal-level chemical homeostasis   • renal water homeostasis   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • cell division   • leukocyte migration   • mononuclear cell migration   • lymphocyte migration   • cell migration   • T cell migration   • cell motility   • regulation of steroid biosynthetic process   • regulation of cholesterol biosynthetic process   • regulation of cholesterol metabolic process   • steroid metabolic process   • regulation of lipid metabolic process   • sterol metabolic process   • cholesterol metabolic process   • lipid biosynthetic process   • alcohol metabolic process   • regulation of primary metabolic process   • regulation of small molecule metabolic process   • positive regulation of biosynthetic process   • positive regulation of lipid metabolic process   • small molecule metabolic process   • steroid biosynthetic process   • secondary alcohol biosynthetic process   • regulation of alcohol biosynthetic process   • small molecule biosynthetic process   • regulation of steroid metabolic process   • cholesterol biosynthetic process   • positive regulation of cholesterol biosynthetic process   • primary metabolic process   • secondary alcohol metabolic process   • positive regulation of steroid biosynthetic process   • sterol biosynthetic process   • positive regulation of lipid biosynthetic process   • regulation of sterol biosynthetic process   • alcohol biosynthetic process   • positive regulation of cholesterol metabolic process   • positive regulation of steroid metabolic process   • regulation of lipid biosynthetic process   • positive regulation of small molecule metabolic process   • positive regulation of alcohol biosynthetic process   • positive regulation of sterol biosynthetic process   • lipid metabolic process   • negative regulation of protein transport   • negative regulation of establishment of protein localization   • negative regulation of protein secretion   • negative regulation of protein localization   • negative regulation of insulin secretion   • regulation of cytoskeleton organization   • regulation of cellular component organization   • microtubule cytoskeleton organization   • regulation of mitotic spindle organization   • mitotic cell cycle   • cellular component organization   • cell cycle   • cellular component organization or biogenesis   • regulation of cell cycle   • microtubule cytoskeleton organization involved in mitosis   • spindle organization   • cell cycle process   • regulation of cell cycle process   • regulation of microtubule-based process   • regulation of spindle organization   • regulation of organelle organization   • mitotic spindle organization   • organelle organization   • mitotic cell cycle process   • microtubule-based process   • cytoskeleton organization   • regulation of microtubule cytoskeleton organization   • positive regulation of protein localization to cell periphery   • protein localization to cell periphery   • positive regulation of protein localization to cell cortex   • regulation of protein localization to cell periphery   • regulation of protein localization to cell cortex   • positive regulation of protein localization   • protein localization to cell cortex   • cellular response to forskolin   • response to forskolin   • Golgi apparatus subcompartment   • Golgi apparatus   • organelle subcompartment   • trans-Golgi network membrane   • trans-Golgi network   • midbody   • nucleus   • membrane-enclosed lumen   • nucleolus   • intracellular organelle lumen   • organelle lumen   • nuclear lumen   • cell cortex   • centrosome   • centriolar satellite   • nucleoplasm
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeHXA
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodeHXA
NameDoconexent
Synonyms4,7,10,13,16,19-docosahexaenoic acid
Identifier
FormulaC22 H32 O2
Molecular Weight328.488
SMILES
PubChem445580
Formal Charge0
Total Atoms56
Total Chiral Atoms0
Total Bonds55
Total Aromatic Bonds0

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtQ5NUL3
Sequence
>8H4L_nogp_Chain_R
NRTRFPFFS DVKGDHRLV LAAVETTVL VLIFAVSLL GNVCALVLV 
ARRRRRGAT ACLVLNLFC ADLLFISAI PLVLAVRWT EAWLLGPVA 
CHLLFYVMT LSGSVTILT LAAVSLERM VCIVHLQRG VRGPGRRAR 
AVLLALIWG YSAVAALPL CVFFRVVPQ RLPGADQEI SICTLIWPT 
IPGEISWDV SFVTLNFLV PGLVIVISY SKILQITKA SRKRLTVSL 
AYSESHQIR VSQQDFRLF RTLFLLMVS FFIMWSPII ITILLILIQ 
NFKQDLVIW PSLFFWVVA FTFANSALN PILYN


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
8IYSALipidFree Fatty AcidFFA4Homo sapiensTUG-891GDPchim(NtGi1L-Gq)/β1/γ22.952023-06-21doi.org/10.1038/s41422-023-00835-x
8IYS (No Gprot) ALipidFree Fatty AcidFFA4Homo sapiensTUG-891GDP2.952023-06-21doi.org/10.1038/s41422-023-00835-x
8H4IALipidFree Fatty AcidFFA4Homo sapiensDoconexent-chim(NtGi1-Gs)/β1/γ23.062023-06-21doi.org/10.1038/s41422-023-00835-x
8H4I (No Gprot) ALipidFree Fatty AcidFFA4Homo sapiensDoconexent-3.062023-06-21doi.org/10.1038/s41422-023-00835-x
8H4KALipidFree Fatty AcidFFA4Homo sapiensGW9508-chim(NtGi1-Gs-CtGq)/β1/γ23.12023-06-21doi.org/10.1038/s41422-023-00835-x
8H4K (No Gprot) ALipidFree Fatty AcidFFA4Homo sapiensGW9508-3.12023-06-21doi.org/10.1038/s41422-023-00835-x
8H4LALipidFree Fatty AcidFFA4Homo sapiensDoconexent-chim(NtGi1-Gs-CtGq)/β1/γ23.072023-06-21doi.org/10.1038/s41422-023-00835-x
8H4L (No Gprot) ALipidFree Fatty AcidFFA4Homo sapiensDoconexent-3.072023-06-21doi.org/10.1038/s41422-023-00835-x
8T3OALipidFree Fatty AcidFFA4Homo sapiensTUG-891-chim(NtGi2L-Gs-CtGq)/β1/γ23.062024-01-17doi.org/10.1126/sciadv.adj2384
8T3O (No Gprot) ALipidFree Fatty AcidFFA4Homo sapiensTUG-891-3.062024-01-17doi.org/10.1126/sciadv.adj2384
8T3QALipidFree Fatty AcidFFA4Homo sapiensDocosa-4,7,10,13,16,19-Hexaenoic acid-chim(NtGi2L-Gs-CtGq)/β1/γ23.142024-01-24doi.org/10.1126/sciadv.adj2384
8T3Q (No Gprot) ALipidFree Fatty AcidFFA4Homo sapiensDocosa-4,7,10,13,16,19-Hexaenoic acid-3.142024-01-24doi.org/10.1126/sciadv.adj2384
8G59ALipidFree Fatty AcidFFA4Homo sapiensTUG-891-chim(Gi1-CtGq)/β1/γ22.642023-03-08doi.org/10.1126/science.add6220
8G59 (No Gprot) ALipidFree Fatty AcidFFA4Homo sapiensTUG-891-2.642023-03-08doi.org/10.1126/science.add6220
8ID3ALipidFree Fatty AcidFFA4Homo sapiens9-Hydroxystearic acid-Gi1/β1/γ23.12023-03-15doi.org/10.1126/science.add6220
8ID3 (No Gprot) ALipidFree Fatty AcidFFA4Homo sapiens9-Hydroxystearic acid-3.12023-03-15doi.org/10.1126/science.add6220
8ID4ALipidFree Fatty AcidFFA4Homo sapiensLinoleic acid-Gi1/β1/γ23.12023-03-15doi.org/10.1126/science.add6220
8ID4 (No Gprot) ALipidFree Fatty AcidFFA4Homo sapiensLinoleic acid-3.12023-03-15doi.org/10.1126/science.add6220
8ID6ALipidFree Fatty AcidFFA4Homo sapiensOleic acid-Gi1/β1/γ22.82023-03-15doi.org/10.1126/science.add6220
8ID6 (No Gprot) ALipidFree Fatty AcidFFA4Homo sapiensOleic acid-2.82023-03-15doi.org/10.1126/science.add6220
8ID8ALipidFree Fatty AcidFFA4Homo sapiensTUG-891-Gi1/β1/γ232023-03-15doi.org/10.1126/science.add6220
8ID8 (No Gprot) ALipidFree Fatty AcidFFA4Homo sapiensTUG-891-32023-03-15doi.org/10.1126/science.add6220
8ID9ALipidFree Fatty AcidFFA4Homo sapiensEicosapentaenoic acid-Gi1/β1/γ232023-03-15doi.org/10.1126/science.add6220
8ID9 (No Gprot) ALipidFree Fatty AcidFFA4Homo sapiensEicosapentaenoic acid-32023-03-15doi.org/10.1126/science.add6220




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 8H4L_nogp.zip



You can click to copy the link of this page to easily come back here later

or use this QR code to link and share this page.



You can also  read or  download a guide explaining the meaning of all files and numerical data.