Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:?1 5.486361110
2R:R:Y66 3.89456
3R:R:Y97 3.685407
4R:R:N100 4.205409
5R:R:Q115 4.7475417
6R:R:Y119 8.21454
7R:R:W124 8.214568
8R:R:F126 5.09507
9R:R:Y140 5.6025405
10R:R:N141 5.23408
11R:R:M142 5.69417
12R:R:L149 3.2125418
13R:R:Y157 5.524537
14R:R:C161 4.615437
15R:R:H162 4.17436
16R:R:R170 6.29406
17R:R:W183 8.335409
18R:R:R202 6.7925472
19R:R:F214 3.48446
20R:R:K227 3.218504
21R:R:I232 3.4725495
22R:R:F235 7.404518
23R:R:Y246 3.596528
24R:R:L253 2.82408
25R:R:K265 4.34754104
26R:R:F283 4.624519
27R:R:W287 7.71618
28R:R:T288 3.345405
29R:R:Y320 6.195616
30R:R:N322 9.655419
31R:R:Y330 5.492519
32R:R:F337 4.4325408
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:?1 R:R:D138 41.02182.97YesNo006
2R:R:D138 R:R:Y320 41.6613.45NoYes066
3R:R:M112 R:R:Y320 27.58078.38NoYes076
4R:R:M112 R:R:V69 15.7653.04NoNo077
5R:R:V65 R:R:V69 14.33141.6NoNo057
6R:R:I61 R:R:V65 10.76111.54NoNo055
7L:L:?1 R:R:I316 56.05172.34YesNo105
8R:R:I316 R:R:Y320 38.96739.67NoYes156
9R:R:I316 R:R:Q115 15.93398.23NoYes157
10R:R:Q115 R:R:Y313 15.39972.25YesNo074
11R:R:Y119 R:R:Y313 13.897618.86YesNo044
12L:L:?1 R:R:W287 57.21593.11YesYes108
13R:R:F235 R:R:W287 67.81723.01YesYes188
14R:R:F235 R:R:F283 91.07436.43YesYes189
15R:R:F283 R:R:L149 1002.44YesYes198
16R:R:L149 R:R:N326 13.85654.12YesNo189
17R:R:N326 R:R:P327 16.15761.63NoNo199
18R:R:N77 R:R:P327 12.96176.52NoNo199
19R:R:N77 R:R:T109 11.40484.39NoNo096
20L:L:?1 R:R:H291 55.72759.13YesNo008
21R:R:F235 R:R:H291 55.800615.84YesNo088
22R:R:L149 R:R:Y330 62.01433.52YesYes189
23R:R:M152 R:R:Y330 59.82745.99NoYes089
24R:R:M152 R:R:Y97 58.09715.99NoYes087
25R:R:I178 R:R:Y97 50.30822.42NoYes067
26R:R:F169 R:R:I178 47.84733.77NoNo046
27R:R:F169 R:R:I158 46.86575.02NoNo045
28R:R:A166 R:R:I158 35.78511.62NoNo055
29R:R:A166 R:R:R170 34.32861.38NoYes056
30R:R:D155 R:R:R170 29.904615.48NoYes086
31R:R:D155 R:R:T94 28.41161.45NoNo088
32R:R:T92 R:R:T94 26.92784.71NoNo078
33R:R:N95 R:R:T92 22.366813.16NoNo077
34R:R:N95 R:R:T88 20.82825.85NoNo076
35R:R:L101 R:R:L149 27.79072.77NoYes098
36R:R:L101 R:R:T148 26.51695.9NoNo097
37R:R:N100 R:R:T148 24.56282.92YesNo097
38R:R:N100 R:R:W183 17.95642.26YesYes099
39R:R:M142 R:R:N141 11.87974.21YesYes078
40R:R:T111 R:R:Y320 55.6916.24NoYes176
41R:R:F114 R:R:T111 50.04343.89NoNo157
42R:R:F114 R:R:F126 47.17626.43NoYes057
43R:R:F126 R:R:W124 20.75515.01YesYes078
44R:R:F126 R:R:L130 12.19478.53YesNo075
45R:R:M142 R:R:S145 12.9163.07YesNo079
46R:R:I146 R:R:S145 12.6333.1NoNo079
47R:R:I146 R:R:P238 13.65573.39NoNo079
48R:R:F235 R:R:V239 29.61246.55YesNo186
49R:R:I243 R:R:V239 30.62591.54NoNo056
50R:R:I243 R:R:V280 29.67171.54NoNo058
51R:R:V280 R:R:Y246 28.93672.52NoYes088
52R:R:M249 R:R:Y246 24.63133.59NoYes288
53R:R:I158 R:R:Y157 15.96583.63NoYes057
54R:R:M249 R:R:V160 29.48917.61NoNo088
55R:R:L253 R:R:V160 28.43451.49YesNo088
56L:L:?1 R:R:I294 23.49919.36YesNo005
57R:R:I294 R:R:K227 21.96051.45NoYes054
58R:R:L253 R:R:L259 16.34024.15YesNo083
59R:R:K265 R:R:L259 13.10787.05YesNo1043
60L:L:?1 R:R:Y312 10.22231.92YesNo004
61R:R:F283 R:R:I146 11.54643.77YesNo097
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:?1 R:R:I135 3.12 1 Yes No 0 4 0 1
L:L:?1 R:R:D138 2.97 1 Yes No 0 6 0 1
L:L:?1 R:R:Y139 13.45 1 Yes No 0 5 0 1
L:L:?1 R:R:M142 8.5 1 Yes Yes 0 7 0 1
L:L:?1 R:R:F143 3.33 1 Yes No 0 6 0 1
L:L:?1 R:R:W287 3.11 1 Yes Yes 0 8 0 1
L:L:?1 R:R:I290 3.12 1 Yes No 0 6 0 1
L:L:?1 R:R:H291 9.13 1 Yes No 0 8 0 1
L:L:?1 R:R:I294 9.36 1 Yes No 0 5 0 1
L:L:?1 R:R:I316 2.34 1 Yes No 0 5 0 1
R:R:I316 R:R:Q115 8.23 1 No Yes 5 7 1 2
R:R:Q115 R:R:Y320 5.64 1 Yes Yes 7 6 2 2
R:R:I135 R:R:Y139 2.42 1 No No 4 5 1 1
R:R:D138 R:R:N141 4.04 0 No Yes 6 8 1 2
R:R:D138 R:R:Y320 3.45 0 No Yes 6 6 1 2
R:R:M142 R:R:N141 4.21 1 Yes Yes 7 8 1 2
R:R:M142 R:R:S145 3.07 1 Yes No 7 9 1 2
R:R:M142 R:R:W287 6.98 1 Yes Yes 7 8 1 1
R:R:F143 R:R:V189 5.24 0 No No 6 5 1 2
R:R:F143 R:R:V230 2.62 0 No No 6 5 1 2
R:R:A234 R:R:H291 4.39 0 No No 6 8 2 1
R:R:F235 R:R:W287 3.01 1 Yes Yes 8 8 2 1
R:R:F235 R:R:H291 15.84 1 Yes No 8 8 2 1
R:R:I290 R:R:W287 3.52 1 No Yes 6 8 1 1
R:R:G319 R:R:W287 7.04 1 No Yes 7 8 2 1
R:R:N322 R:R:W287 22.6 1 Yes Yes 9 8 2 1
R:R:C315 R:R:I290 3.27 0 No No 7 6 2 1
R:R:F293 R:R:Y312 6.19 0 No No 5 4 2 1
R:R:L309 R:R:Y312 2.34 0 No No 4 4 2 1
R:R:I316 R:R:Y320 9.67 1 No Yes 5 6 1 2
R:R:G319 R:R:N322 5.09 1 No Yes 7 9 2 2
L:L:?1 R:R:Y312 1.92 1 Yes No 0 4 0 1
R:R:I294 R:R:K227 1.45 0 No Yes 5 4 1 2

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 8VVG_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 2.25
Number of Linked Nodes 260
Number of Links 277
Number of Hubs 32
Number of Links mediated by Hubs 129
Number of Communities 10
Number of Nodes involved in Communities 54
Number of Links involved in Communities 65
Path Summary
Number Of Nodes in MetaPath 62
Number Of Links MetaPath 61
Number of Shortest Paths 44442
Length Of Smallest Path 3
Average Path Length 13.7793
Length of Longest Path 31
Minimum Path Strength 1.42
Average Path Strength 5.00115
Maximum Path Strength 16.025
Minimum Path Correlation 0.7
Average Path Correlation 0.919218
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 4.16667
Average % Of Corr. Nodes 45.9554
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 41.6131
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process• ovulation cycle   • rhythmic process   • estrous cycle   • reproductive process   • multicellular organismal reproductive process   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • cell communication   • G protein-coupled opioid receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction   • multicellular organismal process   • system process   • sensory perception   • nervous system process   • phospholipase C-activating G protein-coupled receptor signaling pathway   • trans-synaptic signaling   • synaptic signaling   • anterograde trans-synaptic signaling   • cell-cell signaling   • chemical synaptic transmission   • behavior   • learning   • learning or memory   • cognition   • conditioned place preference   • associative learning   • biological process involved in interspecies interaction between organisms   • response to other organism   • defense response   • response to external stimulus   • response to biotic stimulus   • defense response to virus   • defense response to other organism   • response to stress   • response to external biotic stimulus   • response to virus   • response to acrylamide   • response to chemical   • response to oxygen-containing compound   • response to nitrogen compound   • neuropeptide signaling pathway   • locomotory behavior   • adult behavior   • behavioral response to cocaine   • response to cocaine   • response to alkaloid   • response to hormone   • response to endogenous stimulus   • response to estrogen   • immune response   • immune system process   • homeostatic process   • cellular response to glucose stimulus   • intracellular glucose homeostasis   • cellular response to oxygen-containing compound   • response to hexose   • cellular response to carbohydrate stimulus   • cellular response to chemical stimulus   • cellular homeostasis   • response to monosaccharide   • response to carbohydrate   • chemical homeostasis   • response to glucose   • glucose homeostasis   • carbohydrate homeostasis   • cellular response to hexose stimulus   • intracellular chemical homeostasis   • cellular response to monosaccharide stimulus   • maternal behavior   • parental behavior   • reproductive behavior   • regulation of localization   • negative regulation of luteinizing hormone secretion   • regulation of system process   • negative regulation of biological process   • negative regulation of transport   • localization   • negative regulation of secretion   • regulation of luteinizing hormone secretion   • luteinizing hormone secretion   • negative regulation of hormone secretion   • negative regulation of secretion by cell   • regulation of biological quality   • regulation of hormone levels   • establishment of localization   • regulation of secretion   • endocrine hormone secretion   • negative regulation of gonadotropin secretion   • negative regulation of multicellular organismal process   • regulation of endocrine process   • regulation of hormone secretion   • gonadotropin secretion   • transport   • negative regulation of signaling   • hormone secretion   • negative regulation of cell communication   • secretion by cell   • regulation of secretion by cell   • signal release   • negative regulation of cellular process   • regulation of multicellular organismal process   • regulation of signaling   • secretion   • regulation of transport   • regulation of gonadotropin secretion   • export from cell   • endocrine process   • hormone transport   • regulation of cell communication   • eating behavior   • feeding behavior   • sensory perception of temperature stimulus   • response to lipid   • cellular response to lipopolysaccharide   • cellular response to molecule of bacterial origin   • response to lipopolysaccharide   • cellular response to biotic stimulus   • response to bacterium   • cellular response to lipid   • response to molecule of bacterial origin   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • adenylate cyclase-inhibiting opioid receptor signaling pathway   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • monoamine transport   • nitrogen compound transport   • regulation of catecholamine secretion   • positive regulation of biological process   • organic hydroxy compound transport   • positive regulation of secretion by cell   • dopamine transport   • positive regulation of amine transport   • catecholamine transport   • positive regulation of secretion   • positive regulation of cellular process   • positive regulation of catecholamine secretion   • dopamine secretion   • positive regulation of dopamine secretion   • catecholamine secretion   • amine transport   • positive regulation of transport   • regulation of amine transport   • regulation of dopamine secretion   • regulation of body fluid levels   • secretion by tissue   • digestive system process   • regulation of digestive system process   • body fluid secretion   • digestion   • saliva secretion   • regulation of saliva secretion   • response to alcohol   • response to ethanol   • response to peptide hormone   • response to insulin   • positive regulation of cell communication   • positive regulation of signal transduction   • regulation of signal transduction   • p38MAPK cascade   • intracellular signal transduction   • positive regulation of response to stimulus   • regulation of intracellular signal transduction   • intracellular signaling cassette   • positive regulation of MAPK cascade   • positive regulation of intracellular signal transduction   • regulation of MAPK cascade   • positive regulation of p38MAPK cascade   • regulation of response to stimulus   • regulation of p38MAPK cascade   • MAPK cascade   • positive regulation of signaling   • regulation of eating behavior   • positive regulation of feeding behavior   • positive regulation of eating behavior   • regulation of behavior   • positive regulation of behavior   • positive regulation of multicellular organismal process   • regulation of feeding behavior   • sensory perception of pain   • response to nicotine   • positive regulation of cation transmembrane transport   • regulation of potassium ion transport   • monoatomic ion transmembrane transport   • potassium ion transmembrane transport   • regulation of monoatomic ion transmembrane transport   • metal ion transport   • monoatomic cation transmembrane transport   • positive regulation of monoatomic ion transport   • positive regulation of transmembrane transport   • monoatomic ion transport   • positive regulation of monoatomic ion transmembrane transport   • monoatomic cation transport   • regulation of metal ion transport   • regulation of monoatomic ion transport   • inorganic ion transmembrane transport   • regulation of potassium ion transmembrane transport   • inorganic cation transmembrane transport   • transmembrane transport   • positive regulation of potassium ion transport   • regulation of transmembrane transport   • positive regulation of potassium ion transmembrane transport   • regulation of monoatomic cation transmembrane transport   • potassium ion transport   • cell periphery   • postsynapse   • cellular anatomical structure   • postsynaptic membrane   • synapse   • cell junction   • membrane   • plasma membrane   • plasma membrane region   • synaptic membrane   • sarcolemma   • T-tubule   • somatodendritic compartment   • cell body
Gene OntologyCellular Component• cell periphery   • postsynapse   • cellular anatomical structure   • postsynaptic membrane   • synapse   • cell junction   • membrane   • plasma membrane   • plasma membrane region   • synaptic membrane   • sarcolemma   • T-tubule   • somatodendritic compartment   • cell body   • perikaryon   • neuronal cell body   • intracellular anatomical structure   • cytoplasm   • cytosol   • presynapse   • presynaptic membrane   • cell projection   • dendrite   • dendritic tree   • neuron projection   • plasma membrane bounded cell projection   • membrane-bounded organelle   • intracellular membrane-bounded organelle   • endomembrane system   • sarcoplasm   • intracellular organelle   • organelle   • endoplasmic reticulum   • sarcoplasmic reticulum   • intracellular vesicle   • transport vesicle membrane   • bounding membrane of organelle   • cytoplasmic vesicle   • vesicle membrane   • synaptic vesicle   • synaptic vesicle membrane   • vesicle   • transport vesicle   • exocytic vesicle membrane   • cytoplasmic vesicle membrane   • secretory vesicle   • organelle membrane   • exocytic vesicle   • mitochondrion   • nucleus   • membrane-enclosed lumen   • intracellular organelle lumen   • nucleoplasm   • organelle lumen   • nuclear lumen   • axon   • axon terminus   • distal axon   • neuron projection terminus   • protein binding   • binding   • enzyme binding   • GTPase binding   • protein-containing complex binding   • pyrophosphatase activity   • GTPase activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • signaling receptor complex adaptor activity   • protein-macromolecule adaptor activity   • molecular adaptor activity   • signaling adaptor activity   • multicellular organismal process   • system process   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of taste   • developmental process   • sensory organ development   • eye development   • animal organ development   • retina development in camera-type eye   • visual system development   • multicellular organism development   • camera-type eye development   • anatomical structure development   • sensory system development   • system development   • cell population proliferation   • cellular process   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • signal transduction   • cell communication   • response to ketone   • response to prostaglandin   • response to lipid   • response to endogenous stimulus   • response to alcohol   • cellular response to prostaglandin stimulus   • response to oxygen-containing compound   • cellular response to oxygen-containing compound   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to chemical stimulus   • cellular response to alcohol   • response to hormone   • response to chemical   • cellular response to lipid   • response to prostaglandin E   • cellular response to ketone   • cellular response to hormone stimulus   • small GTPase-mediated signal transduction   • Ras protein signal transduction   • intracellular signal transduction   • intracellular signaling cassette   • phospholipase C-activating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular response to nitrogen compound   • response to dopamine   • cellular response to dopamine   • response to monoamine   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • G protein-coupled dopamine receptor signaling pathway   • response to nitrogen compound   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cellular response to monoamine stimulus   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • synaptic signaling   • cellular response to acetylcholine   • cell-cell signaling   • acetylcholine receptor signaling pathway   • postsynaptic signal transduction   • G protein-coupled acetylcholine receptor signaling pathway   • response to acetylcholine   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cytoplasmic side of plasma membrane   • GTPase complex   • extrinsic component of membrane   • extrinsic component of cytoplasmic side of plasma membrane   • extracellular exosome   • extracellular vesicle   • extracellular organelle   • extracellular region   • extracellular space   • extracellular membrane-bounded organelle   • non-motile cilium   • 9+0 non-motile cilium   • cilium   • photoreceptor disc membrane   • photoreceptor outer segment   • photoreceptor cell cilium   • vacuolar membrane   • lytic vacuole   • vacuole   • lytic vacuole membrane   • lysosomal membrane   • lysosome   • G-protein beta-subunit binding   • fibroblast proliferation   • D2 dopamine receptor binding   • signaling receptor binding   • G protein-coupled receptor binding   • dopamine receptor binding   • phosphorus-oxygen lyase activity   • enzyme regulator activity   • cyclase regulator activity   • molecular function regulator activity   • cyclase activity   • adenylate cyclase regulator activity   • lyase activity   • adenylate cyclase activity   • guanyl nucleotide binding   • GTP binding   • nucleotide binding   • guanyl ribonucleotide binding   • purine ribonucleotide binding   • purine ribonucleoside triphosphate binding   • nucleoside phosphate binding   • ion binding   • purine nucleotide binding   • anion binding   • heterocyclic compound binding   • carbohydrate derivative binding   • ribonucleotide binding   • small molecule binding   • cation binding   • magnesium ion binding   • metal ion binding   • GDP binding   • G protein-coupled serotonin receptor binding   • G-protein beta/gamma-subunit complex binding   • G protein activity   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • response to peptide hormone   • cell division   • leukocyte migration   • immune system process   • mononuclear cell migration   • lymphocyte migration   • cell migration   • T cell migration   • cell motility   • regulation of steroid biosynthetic process   • regulation of cholesterol biosynthetic process   • regulation of cholesterol metabolic process   • steroid metabolic process   • regulation of lipid metabolic process   • sterol metabolic process   • positive regulation of biological process   • cholesterol metabolic process   • lipid biosynthetic process   • alcohol metabolic process   • regulation of primary metabolic process   • positive regulation of metabolic process   • regulation of small molecule metabolic process   • positive regulation of biosynthetic process   • positive regulation of lipid metabolic process   • small molecule metabolic process   • steroid biosynthetic process   • positive regulation of cellular process   • regulation of biosynthetic process   • secondary alcohol biosynthetic process   • regulation of alcohol biosynthetic process   • small molecule biosynthetic process   • regulation of steroid metabolic process   • cholesterol biosynthetic process   • positive regulation of cholesterol biosynthetic process   • primary metabolic process   • secondary alcohol metabolic process   • positive regulation of steroid biosynthetic process   • biosynthetic process   • sterol biosynthetic process   • positive regulation of lipid biosynthetic process   • regulation of sterol biosynthetic process   • alcohol biosynthetic process   • positive regulation of cholesterol metabolic process   • positive regulation of steroid metabolic process   • metabolic process   • regulation of lipid biosynthetic process   • positive regulation of small molecule metabolic process   • regulation of metabolic process   • positive regulation of alcohol biosynthetic process   • positive regulation of sterol biosynthetic process   • lipid metabolic process   • regulation of cytoskeleton organization   • regulation of cellular component organization   • microtubule cytoskeleton organization   • regulation of mitotic spindle organization   • mitotic cell cycle   • cellular component organization   • cell cycle   • cellular component organization or biogenesis   • regulation of cell cycle   • microtubule cytoskeleton organization involved in mitosis   • spindle organization   • cell cycle process   • regulation of cell cycle process   • regulation of microtubule-based process   • regulation of spindle organization   • regulation of organelle organization   • mitotic spindle organization   • organelle organization   • mitotic cell cycle process   • microtubule-based process   • cytoskeleton organization   • regulation of microtubule cytoskeleton organization   • protein localization   • positive regulation of protein localization to cell periphery   • regulation of localization   • protein localization to cell periphery   • cellular localization   • regulation of protein localization   • positive regulation of protein localization to cell cortex   • regulation of protein localization to cell periphery   • localization   • regulation of cellular localization   • regulation of protein localization to cell cortex   • cellular macromolecule localization   • macromolecule localization   • positive regulation of protein localization   • protein localization to cell cortex   • cellular response to forskolin   • response to forskolin   • midbody   • intracellular membraneless organelle   • nucleolus   • membraneless organelle   • cell cortex   • centrosome   • microtubule organizing center   • cytoskeleton   • microtubule cytoskeleton   • centriolar satellite   • Golgi apparatus   • ciliary basal body
SCOP2Domain Identifier• G protein-coupled receptor-like   • Transducin (heterotrimeric G protein), gamma chain   • Ras-like P-loop GTPases
SCOP2Family Identifier• G protein-coupled receptor-like   • Transducin (heterotrimeric G protein), gamma chain   • Ras-like P-loop GTPases
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeA1A
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodeA1A
Name6-AMINO HEXANOIC ACID
Synonyms
Identifier
FormulaC33 H40 N4 O6
Molecular Weight588.694
SMILES
PubChem5327090
Formal Charge0
Total Atoms83
Total Chiral Atoms4
Total Bonds86
Total Aromatic Bonds18

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP41145
Sequence
>8VVG_nogp_Chain_R
AIPVIITAV YSVVFVVGL VGNSLVMFV IIRYTKMKT ATNIYIFNL 
ALADALVTT TMPFQSTVY LMNSWPFGD VLCKIVISI DYYNMFTSI 
FTLTMMSVD RYIAVCHPV KALDFRTPL KAKIINICI WLLSSSVGI 
SAIVLGGTK VREDVDVIE CSLQFPDDD YSWWDLFMK ICVFIFAFV 
IPVLIIIVC YTLMILRLK SVRLLSGSR EKDRNLRRI TRLVLVVVA 
VFVVCWTPI HIFILVEAL GSTSHSTAA LSSYYFCIA LGYTNSSLN 
PILYAFLDE NFKRCF


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
9MQLAPeptideOpioidκHomo sapiensIsoquinuclidine--2.962025-02-1210.1101/2025.01.09.632033
9MQKAPeptideOpioidκHomo sapiensIsoquinuclidine--3.182025-02-1210.1101/2025.01.09.632033
9D61APeptideOpioidκHomo sapiensJDTic-Gi1/β1/γ23.582025-01-15doi.org/10.1038/s41589-024-01812-0
9D61 (No Gprot) APeptideOpioidκHomo sapiensJDTic-3.582025-01-15doi.org/10.1038/s41589-024-01812-0
8VVGAPeptideOpioidκHomo sapiensGB18-Gi1/β1/γ23.32025-01-15doi.org/10.1038/s41589-024-01812-0
8VVG (No Gprot) APeptideOpioidκHomo sapiensGB18-3.32025-01-15doi.org/10.1038/s41589-024-01812-0
8VVFAPeptideOpioidκHomo sapiensJDTic-Gi1/β1/γ232025-01-15doi.org/10.1038/s41589-024-01812-0
8VVF (No Gprot) APeptideOpioidκHomo sapiensJDTic-32025-01-15doi.org/10.1038/s41589-024-01812-0
8VVEAPeptideOpioidκHomo sapiensnorBNI-Gi1/β1/γ23.32025-01-15doi.org/10.1038/s41589-024-01812-0
8VVE (No Gprot) APeptideOpioidκHomo sapiensnorBNI-3.32025-01-15doi.org/10.1038/s41589-024-01812-0
8FEGAPeptideOpioidκHomo sapiens(DNCP)-β-Naloxamine-Gi1/β1/γ22.542023-12-0610.1038/s41467-023-43718-w
8FEG (No Gprot) APeptideOpioidκHomo sapiens(DNCP)-β-Naloxamine-2.542023-12-0610.1038/s41467-023-43718-w
7Y1FAPeptideOpioidκHomo sapiensDynorphin-Gi1/β1/γ23.32023-05-2410.1093/procel/pwac033
7Y1F (No Gprot) APeptideOpioidκHomo sapiensDynorphin-3.32023-05-2410.1093/procel/pwac033
8DZRAPeptideOpioidκHomo sapiensGR89,696-chim(NtGi2-Gt3)/β1/γ22.612023-05-0310.1038/s41586-023-06030-7
8DZR (No Gprot) APeptideOpioidκHomo sapiensGR89,696-2.612023-05-0310.1038/s41586-023-06030-7
8DZSAPeptideOpioidκHomo sapiensGR89,696-chim(NtGi2-Gz)/β1/γ22.652023-05-0310.1038/s41586-023-06030-7
8DZS (No Gprot) APeptideOpioidκHomo sapiensGR89,696-2.652023-05-0310.1038/s41586-023-06030-7
8DZPAPeptideOpioidκHomo sapiensmomSalB-Gi1/β1/γ22.712023-05-0310.1038/s41586-023-06030-7
8DZP (No Gprot) APeptideOpioidκHomo sapiensmomSalB-2.712023-05-0310.1038/s41586-023-06030-7
8DZQAPeptideOpioidκHomo sapiensmomSalB-Go/β1/γ22.822023-05-0310.1038/s41586-023-06030-7
8DZQ (No Gprot) APeptideOpioidκHomo sapiensmomSalB-2.822023-05-0310.1038/s41586-023-06030-7
7YITAPeptideOpioidκHomo sapiensNalfurafine--3.32023-04-1210.1038/s41467-023-37041-7
8F7WAPeptideOpioidκHomo sapiensDynorphin-Gi1/β1/γ23.192022-12-1410.1016/j.cell.2022.12.026
8F7W (No Gprot) APeptideOpioidκHomo sapiensDynorphin-3.192022-12-1410.1016/j.cell.2022.12.026
6VI4APeptideOpioidκHomo sapiensJDTic--3.32020-03-1810.1038/s41467-020-14889-7
6B73APeptideOpioidκHomo sapiensMP1104--3.12018-01-1710.1016/j.cell.2017.12.011
4DJHAPeptideOpioidκHomo sapiensJDTic--2.92012-03-2110.1038/nature10939
4DJH (Multimeric) APeptideOpioidκHomo sapiensJDTic-2.92012-03-2110.1038/nature10939




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 8VVG_nogp.zip



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