Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:?1 8.6611010
2R:R:F71 5.76406
3R:R:L73 4.6528
4R:R:L76 6.716529
5R:R:D80 7.828529
6R:R:Y91 8.4718
7R:R:W100 8.74167619
8R:R:F102 7.7325408
9R:R:W110 5.62167616
10R:R:D114 7.7475419
11R:R:Y115 6.8425419
12R:R:I128 4.6025429
13R:R:W160 8.545449
14R:R:Y167 6.91143718
15R:R:W174 7.22415
16R:R:E175 6.495405
17R:R:Y189 7.29414
18R:R:F192 7.20167617
19R:R:F193 10.654515
20R:R:Y194 5.9575416
21R:R:W196 5.1225405
22R:R:F198 5.99667617
23R:R:E206 9.76418
24R:R:F207 6.43833669
25R:R:F208 4.2375407
26R:R:F211 4.8775468
27R:R:N218 5.05459
28R:R:R349 6.91406
29R:R:W371 8.26333608
30R:R:Y374 9.54519
31R:R:R381 8.002514
32R:R:F398 10.052517
33R:R:W399 6.5625419
34R:R:W402 9.15625818
35R:R:N408 8.326529
36R:R:Y412 5.60429729
37R:R:H416 5.6875429
38R:R:F419 5.174529
39R:R:L426 2.275408
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:?1 R:R:W402 33.65217.08YesYes108
2R:R:I88 R:R:W402 11.79717.62NoYes098
3R:R:V83 R:R:W402 49.60863.68NoYes098
4R:R:S405 R:R:V83 46.70418.08NoNo099
5R:R:D80 R:R:S405 46.52488.83YesNo099
6L:L:?1 R:R:E206 22.53039.73YesYes108
7R:R:E206 R:R:W371 77.06337.63YesYes088
8R:R:F367 R:R:W371 35.35537.02NoYes098
9R:R:F367 R:R:I125 34.63816.28NoNo098
10R:R:I125 R:R:Y412 33.22789.67NoYes289
11R:R:I128 R:R:Y412 51.26994.84YesYes299
12R:R:I128 R:R:L73 98.12354.28YesYes298
13L:L:?1 R:R:L401 15.412710.95YesNo108
14R:R:L401 R:R:W371 43.895315.94NoYes088
15R:R:N404 R:R:W371 1006.78NoYes098
16R:R:N404 R:R:N408 98.613512.26NoYes099
17R:R:N408 R:R:Y412 36.22184.65YesYes299
18R:R:L76 R:R:N408 64.220410.98YesYes299
19R:R:I128 R:R:L76 50.18234.28YesYes299
20R:R:D80 R:R:L76 41.49298.14YesYes299
21R:R:L117 R:R:V83 16.53624.47NoNo079
22R:R:L117 R:R:L82 14.92266.92NoNo076
23R:R:F81 R:R:L82 13.29713.65NoNo086
24R:R:L76 R:R:N124 75.83225.49YesNo098
25R:R:N124 R:R:N75 73.429716.35NoNo089
26R:R:M156 R:R:N75 67.214511.22NoNo099
27R:R:F71 R:R:M156 65.93563.73YesNo069
28R:R:F419 R:R:L73 59.5416.09YesYes298
29R:R:F419 R:R:F423 32.50463.22YesNo099
30R:R:A58 R:R:F423 22.87692.77NoNo099
31R:R:A58 R:R:L426 16.39871.58NoYes098
32R:R:F419 R:R:L65 13.04613.65YesNo299
33R:R:F419 R:R:N70 13.04617.25YesNo299
34R:R:A152 R:R:F71 58.01115.55NoYes086
35R:R:A152 R:R:Q68 56.64853.03NoNo088
36R:R:Q68 R:R:R151 55.2744.67NoNo087
37R:R:L73 R:R:N69 22.50045.49YesNo288
38R:R:D131 R:R:N69 20.07416.73NoNo098
39R:R:D131 R:R:F72 10.08797.17NoNo099
40L:L:?1 R:R:D114 12.08396.9YesYes109
41R:R:D114 R:R:W110 10.5546.7YesYes196
42R:R:L90 R:R:W110 10.51223.42NoYes066
43R:R:W110 R:R:W402 27.68783.75YesYes168
44R:R:F398 R:R:Y394 16.05215.16YesNo074
45R:R:W100 R:R:W110 27.00654.69YesYes196
46R:R:F102 R:R:W100 19.404815.03YesYes089
47L:L:?1 R:R:Y115 33.4258.61YesYes109
48R:R:I171 R:R:Y115 36.80153.63NoYes179
49R:R:I171 R:R:V112 41.38534.61NoNo078
50R:R:E206 R:R:T119 21.926712.7YesNo089
51R:R:F123 R:R:T119 17.63585.19NoNo079
52R:R:F123 R:R:P210 11.10982.89NoNo079
53L:L:?1 R:R:T375 18.39485.83YesNo008
54R:R:F207 R:R:T375 18.627912.97YesNo098
55R:R:F207 R:R:F211 23.74957.5YesYes698
56R:R:F211 R:R:T215 19.17.78YesNo086
57R:R:T215 R:R:V364 16.72743.17NoNo068
58R:R:N218 R:R:V364 14.34294.43YesNo098
59R:R:Q145 R:R:R151 51.066814.02NoNo067
60R:R:Q145 R:R:S141 49.82975.78NoNo065
61R:R:R138 R:R:S141 48.39547.91NoNo065
62R:R:R138 R:R:T137 46.94913.88NoNo068
63R:R:F133 R:R:T137 12.293110.38NoNo098
64R:R:N224 R:R:T137 34.94294.39NoNo078
65R:R:F164 R:R:V112 29.84522.62NoNo078
66R:R:F164 R:R:G168 11.97049.03NoNo076
67L:L:?1 R:R:Y167 20.22956.62YesYes108
68R:R:F198 R:R:Y167 41.47494.13YesYes178
69R:R:F198 R:R:W174 23.71364.01YesYes175
70R:R:E191 R:R:W174 20.014314.17NoYes085
71R:R:E175 R:R:E191 17.815117.76YesNo058
72R:R:F198 R:R:N195 15.30514.83YesNo176
73L:L:?1 R:R:Y374 14.73149.27YesYes109
74R:R:M378 R:R:Y374 40.978917.96NoYes189
75R:R:F193 R:R:M378 11.42056.22YesNo158
76R:R:F193 R:R:Y394 17.02038.25YesNo054
77R:R:M378 R:R:R381 27.12017.44NoYes184
78R:R:F192 R:R:Y167 15.04215.16YesYes178
79R:R:H385 R:R:Y194 10.03415.44NoYes046
80R:R:N195 R:R:Y197 13.54812.33NoNo065
81R:R:W196 R:R:Y197 11.31910.61YesNo055
82R:R:F207 R:R:F208 12.15565.36YesYes097
83R:R:N224 R:R:R227 33.56846.03NoNo075
84R:R:R227 R:R:R228 32.00264.26NoNo058
85R:R:R228 R:R:R349 30.4133.2NoYes086
86R:R:R349 R:R:T229 15.681611.64YesNo066
87R:R:D353 R:R:T229 13.98438.67NoNo096
88R:R:L411 R:R:Y412 16.99043.52NoYes099
89R:R:I366 R:R:L411 11.37274.28NoNo079
90R:R:R381 R:R:V389 12.85485.23YesNo045
91R:R:G386 R:R:R381 12.85483NoYes034
92R:R:F164 R:R:L165 11.97041.22NoNo075
93R:R:F102 R:R:T101 11.61182.59YesNo085
94R:R:F398 R:R:W402 12.603810.02YesYes178
95R:R:E206 R:R:Y167 51.83778.98YesYes188
96R:R:Y115 R:R:Y167 10.34488.94YesYes198
97R:R:F207 R:R:W371 30.17997.02YesYes098
98R:R:F192 R:R:I171 10.16555.02YesNo177
99R:R:L401 R:R:Y374 28.15995.86NoYes189
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:?1 R:R:D114 6.9 1 Yes Yes 0 9 0 1
L:L:?1 R:R:Y115 8.61 1 Yes Yes 0 9 0 1
L:L:?1 R:R:C118 7.17 1 Yes No 0 8 0 1
L:L:?1 R:R:Y167 6.62 1 Yes Yes 0 8 0 1
L:L:?1 R:R:E206 9.73 1 Yes Yes 0 8 0 1
L:L:?1 R:R:Y374 9.27 1 Yes Yes 0 9 0 1
L:L:?1 R:R:T375 5.83 1 Yes No 0 8 0 1
L:L:?1 R:R:F398 14.45 1 Yes Yes 0 7 0 1
L:L:?1 R:R:L401 10.95 1 Yes No 0 8 0 1
L:L:?1 R:R:W402 7.08 1 Yes Yes 0 8 0 1
R:R:V83 R:R:W402 3.68 0 No Yes 9 8 2 1
R:R:C87 R:R:D114 6.22 0 No Yes 9 9 2 1
R:R:I88 R:R:W402 17.62 0 No Yes 9 8 2 1
R:R:W110 R:R:Y91 10.61 1 Yes Yes 6 8 2 2
R:R:F398 R:R:Y91 12.38 1 Yes Yes 7 8 1 2
R:R:W399 R:R:Y91 4.82 1 Yes Yes 9 8 2 2
R:R:W402 R:R:Y91 8.68 1 Yes Yes 8 8 1 2
R:R:D114 R:R:W110 6.7 1 Yes Yes 9 6 1 2
R:R:W110 R:R:W402 3.75 1 Yes Yes 6 8 2 1
R:R:D114 R:R:W402 11.17 1 Yes Yes 9 8 1 1
R:R:Y115 R:R:Y167 8.94 1 Yes Yes 9 8 1 1
R:R:I171 R:R:Y115 3.63 1 No Yes 7 9 2 1
R:R:F192 R:R:Y115 6.19 1 Yes Yes 7 9 2 1
R:R:E206 R:R:T119 12.7 1 Yes No 8 9 1 2
R:R:L166 R:R:Y167 10.55 0 No Yes 8 8 2 1
R:R:F192 R:R:Y167 5.16 1 Yes Yes 7 8 2 1
R:R:F198 R:R:Y167 4.13 1 Yes Yes 7 8 2 1
R:R:A202 R:R:Y167 4 1 No Yes 9 8 2 1
R:R:E206 R:R:Y167 8.98 1 Yes Yes 8 8 1 1
R:R:F192 R:R:I171 5.02 1 Yes No 7 7 2 2
R:R:F192 R:R:F198 16.08 1 Yes Yes 7 7 2 2
R:R:A202 R:R:F198 4.16 1 No Yes 9 7 2 2
R:R:E206 R:R:W371 7.63 1 Yes Yes 8 8 1 2
R:R:F207 R:R:W371 7.02 6 Yes Yes 9 8 2 2
R:R:F207 R:R:T375 12.97 6 Yes No 9 8 2 1
R:R:L401 R:R:W371 15.94 1 No Yes 8 8 1 2
R:R:M378 R:R:Y374 17.96 1 No Yes 8 9 2 1
R:R:S397 R:R:Y374 6.36 0 No Yes 7 9 2 1
R:R:F398 R:R:Y374 8.25 1 Yes Yes 7 9 1 1
R:R:L401 R:R:Y374 5.86 1 No Yes 8 9 1 1
R:R:F398 R:R:Y394 5.16 1 Yes No 7 4 1 2
R:R:F398 R:R:W402 10.02 1 Yes Yes 7 8 1 1
R:R:W399 R:R:W402 11.25 1 Yes Yes 9 8 2 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 8YN8_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3.53
Number of Linked Nodes 260
Number of Links 296
Number of Hubs 39
Number of Links mediated by Hubs 150
Number of Communities 7
Number of Nodes involved in Communities 55
Number of Links involved in Communities 81
Path Summary
Number Of Nodes in MetaPath 100
Number Of Links MetaPath 99
Number of Shortest Paths 52913
Length Of Smallest Path 3
Average Path Length 12.8745
Length of Longest Path 34
Minimum Path Strength 1.145
Average Path Strength 7.02409
Maximum Path Strength 17.15
Minimum Path Correlation 0.7
Average Path Correlation 0.927558
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 3.44828
Average % Of Corr. Nodes 53.5785
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 47.0572
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function• enzyme regulator activity   • cyclase regulator activity   • molecular function regulator activity   • adenylate cyclase regulator activity   • mu-type opioid receptor binding   • protein binding   • binding   • signaling receptor binding   • G protein-coupled receptor binding   • opioid receptor binding   • guanyl nucleotide binding   • GTP binding   • nucleotide binding   • guanyl ribonucleotide binding   • purine ribonucleotide binding   • purine ribonucleoside triphosphate binding   • nucleoside phosphate binding   • ion binding   • purine nucleotide binding   • anion binding   • heterocyclic compound binding   • carbohydrate derivative binding   • ribonucleotide binding   • small molecule binding   • peptide hormone receptor binding   • corticotropin-releasing hormone receptor binding   • corticotropin-releasing hormone receptor 1 binding   • hormone receptor binding   • neuropeptide receptor binding   • G protein-coupled serotonin receptor binding   • protein-containing complex binding   • G-protein beta/gamma-subunit complex binding   • pyrophosphatase activity   • GTPase activity   • G protein activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • cation binding   • metal ion binding   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • cell communication   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction
Gene OntologyBiological Process• cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • cell communication   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction   • heart process   • multicellular organismal process   • system process   • regulation of heart contraction   • regulation of system process   • circulatory system process   • regulation of blood circulation   • regulation of multicellular organismal process   • heart contraction   • blood circulation   • behavior   • locomotory behavior   • transport   • secretion   • export from cell   • membrane docking   • establishment of localization   • vesicle-mediated transport   • localization   • organelle localization by membrane tethering   • secretion by cell   • exocytosis   • organelle localization   • vesicle docking   • exocytic process   • vesicle docking involved in exocytosis   • cellular response to nitrogen compound   • response to dopamine   • cellular response to dopamine   • response to monoamine   • response to catecholamine   • cellular response to catecholamine stimulus   • G protein-coupled dopamine receptor signaling pathway   • response to oxygen-containing compound   • response to nitrogen compound   • cellular response to oxygen-containing compound   • cellular response to chemical stimulus   • cellular response to monoamine stimulus   • response to chemical   • negative regulation of protein transport   • regulation of localization   • establishment of protein localization   • nitrogen compound transport   • negative regulation of biological process   • negative regulation of transport   • negative regulation of secretion   • negative regulation of hormone secretion   • negative regulation of secretion by cell   • intracellular protein localization   • regulation of biological quality   • regulation of peptide hormone secretion   • negative regulation of peptide hormone secretion   • regulation of hormone levels   • establishment of protein localization to extracellular region   • negative regulation of establishment of protein localization   • protein secretion   • regulation of protein secretion   • regulation of secretion   • negative regulation of protein secretion   • regulation of hormone secretion   • regulation of protein localization   • regulation of peptide secretion   • negative regulation of signaling   • hormone secretion   • negative regulation of cell communication   • protein localization to extracellular region   • negative regulation of peptide secretion   • peptide secretion   • regulation of secretion by cell   • amide transport   • signal release   • negative regulation of cellular process   • negative regulation of protein localization   • regulation of signaling   • regulation of transport   • regulation of peptide transport   • regulation of establishment of protein localization   • cell-cell signaling   • regulation of protein transport   • peptide transport   • negative regulation of insulin secretion   • protein transport   • regulation of insulin secretion   • peptide hormone secretion   • macromolecule localization   • hormone transport   • regulation of cell communication   • insulin secretion   • trans-synaptic signaling   • modulation of chemical synaptic transmission   • chemical synaptic transmission   • synaptic signaling   • regulation of trans-synaptic signaling   • anterograde trans-synaptic signaling   • postsynaptic modulation of chemical synaptic transmission   • muscle contraction   • muscle system process   • cell periphery   • postsynapse   • cellular anatomical structure   • postsynaptic membrane   • synapse   • cell junction   • membrane   • plasma membrane   • plasma membrane region   • synaptic membrane   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex
Gene OntologyCellular Component• cell periphery   • postsynapse   • cellular anatomical structure   • postsynaptic membrane   • synapse   • cell junction   • membrane   • plasma membrane   • plasma membrane region   • synaptic membrane   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cytoplasmic side of plasma membrane   • GTPase complex   • extrinsic component of membrane   • extrinsic component of cytoplasmic side of plasma membrane   • parallel fiber to Purkinje cell synapse   • excitatory synapse   • presynapse   • presynaptic membrane   • somatodendritic compartment   • cell projection   • dendrite   • dendritic tree   • neuron projection   • plasma membrane bounded cell projection   • intracellular anatomical structure   • cytoplasm   • GABA-ergic synapse   • glutamatergic synapse   • cell body   • protein binding   • binding   • enzyme binding   • GTPase binding   • protein-containing complex binding   • pyrophosphatase activity   • GTPase activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • signaling receptor complex adaptor activity   • protein-macromolecule adaptor activity   • molecular adaptor activity   • signaling adaptor activity   • multicellular organismal process   • system process   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of taste   • developmental process   • sensory organ development   • eye development   • animal organ development   • retina development in camera-type eye   • visual system development   • multicellular organism development   • camera-type eye development   • anatomical structure development   • sensory system development   • system development   • cell population proliferation   • cellular process   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • signal transduction   • cell communication   • response to ketone   • response to prostaglandin   • response to lipid   • response to endogenous stimulus   • response to alcohol   • cellular response to prostaglandin stimulus   • response to oxygen-containing compound   • cellular response to oxygen-containing compound   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to chemical stimulus   • cellular response to alcohol   • response to hormone   • response to chemical   • cellular response to lipid   • response to prostaglandin E   • cellular response to ketone   • cellular response to hormone stimulus   • small GTPase-mediated signal transduction   • Ras protein signal transduction   • intracellular signal transduction   • intracellular signaling cassette   • phospholipase C-activating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular response to nitrogen compound   • response to dopamine   • cellular response to dopamine   • response to monoamine   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • G protein-coupled dopamine receptor signaling pathway   • response to nitrogen compound   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cellular response to monoamine stimulus   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • synaptic signaling   • cellular response to acetylcholine   • cell-cell signaling   • acetylcholine receptor signaling pathway   • postsynaptic signal transduction   • G protein-coupled acetylcholine receptor signaling pathway   • response to acetylcholine   • extracellular exosome   • membrane-bounded organelle   • extracellular vesicle   • extracellular organelle   • extracellular region   • organelle   • extracellular space   • vesicle   • extracellular membrane-bounded organelle   • non-motile cilium   • 9+0 non-motile cilium   • cilium   • photoreceptor disc membrane   • photoreceptor outer segment   • photoreceptor cell cilium   • organelle membrane   • cytosol   • vacuolar membrane   • lytic vacuole   • vacuole   • intracellular membrane-bounded organelle   • intracellular organelle   • lytic vacuole membrane   • bounding membrane of organelle   • lysosomal membrane   • lysosome   • G-protein beta-subunit binding   • fibroblast proliferation   • neurotransmitter receptor activity   • molecular transducer activity   • signaling receptor activity   • G protein-coupled amine receptor activity   • G protein-coupled receptor activity   • transmembrane signaling receptor activity   • histamine receptor activity   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • adenylate cyclase-inhibiting G protein-coupled acetylcholine receptor signaling pathway   • trans-synaptic signaling   • anterograde trans-synaptic signaling   • chemical synaptic transmission   • cellular localization   • neurotransmitter secretion   • transport   • secretion   • export from cell   • neurotransmitter transport   • establishment of localization   • localization   • signal release from synapse   • secretion by cell   • signal release   • establishment of localization in cell   • G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeA1L
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodeA1L
Name[2-[[(2S)-1-[bis(phenylmethyl)amino]-5-[[N-(methylcarbamoyl)carbamimidoyl]amino]-1-oxidanylidene-pentan-2-yl]amino]-2-oxidanylidene-ethyl]-diazonio-azanide
Synonyms
Identifier
FormulaC24 H31 N9 O3
Molecular Weight493.561
SMILES
PubChem44129754
Formal Charge0
Total Atoms67
Total Chiral Atoms1
Total Bonds68
Total Aromatic Bonds12

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtQ9Y5N1
Sequence
>8YN8_nogp_Chain_R
TAVLAALMA LLIVATVLG NALVMLAFV ADSSLRTQN NFFLLNLAI 
SDFLVGAFC IPLYVPYVL TGRWTFGRG LCKLWLVVD YLLCTSSAF 
NIVLISYDR FLSVTRAVS YRAQQGDTR RAVRKMLLV WVLAFLLYG 
PAILSWEYL SGGSSIPEG HCYAEFFYN WYFLITAST LEFFTPFLS 
VTFFNLSIY LNIQRRTRL RLDSFTQRF RLSRDRKVA KSLAVIVSI 
FGLCWAPYT LLMIIRAAC HGHCVPDYW YETSFWLLW ANSAVNPVL 
YPLCHHSFR RAFTKLL


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
8UH3AAmine5-Hydroxytryptamine5-HT1EHomo sapiensSetiptiline-Gi1/β1/γ13.312024-05-01doi.org/10.1126/sciadv.adk4855
8UH3 (No Gprot) AAmine5-Hydroxytryptamine5-HT1EHomo sapiensSetiptiline-3.312024-05-01doi.org/10.1126/sciadv.adk4855
9H37ANucleotideAdenosineA2AHomo sapiensA1IR0Na-1.712025-06-18To be published
8YH3ANucleotideAdenosineA3AHomo sapiensN-methyladenosine-Gi1/β1/γ23.42024-11-06doi.org/10.1038/s41467-024-53473-1
8YH3 (No Gprot) ANucleotideAdenosineA3AHomo sapiensN-methyladenosine-3.42024-11-06doi.org/10.1038/s41467-024-53473-1
8TH3APeptideAngiotensinAT1Homo sapiens-AT118-H Nanobody-32024-05-22doi.org/10.1038/s41589-024-01620-6
9JH3APeptideApelinApelinHomo sapiensCMF-019-Gi1/β1/γ22.932025-04-23doi.org/10.1073/pnas.2423432122
9JH3 (No Gprot) APeptideApelinApelinHomo sapiensCMF-019-2.932025-04-23doi.org/10.1073/pnas.2423432122
8YUVAAmineHistamineH3Homo sapiensImmepip-Gi1/β1/γ232024-06-05doi.org/10.1002/advs.202310120
8YUV (No Gprot) AAmineHistamineH3Homo sapiensImmepip-32024-06-05doi.org/10.1002/advs.202310120
7F61AAmineHistamineH3Homo sapiensPF-03654746--2.62022-10-26doi.org/10.1038/s41467-022-33880-y
8YN7AAmineHistamineH3Homo sapiensImmethridine-Go/β1/γ22.772024-10-16doi.org/10.2210/pdb8YN7/pdb
8YN7 (No Gprot) AAmineHistamineH3Homo sapiensImmethridine-2.772024-10-16doi.org/10.2210/pdb8YN7/pdb
8YN8AAmineHistamineH3Homo sapiensProxyfan-Go/β1/γ22.772024-10-16doi.org/10.2210/pdb8YN7/pdb
8YN8 (No Gprot) AAmineHistamineH3Homo sapiensProxyfan-2.772024-10-16doi.org/10.2210/pdb8YN7/pdb
8YUUAAmineHistamineH3Homo sapiensHistamine-Gi1/β1/γ12.72024-06-05doi.org/10.1002/advs.202310120
8YUU (No Gprot) AAmineHistamineH3Homo sapiensHistamine-2.72024-06-05doi.org/10.1002/advs.202310120
8YN5AAmineHistamineH3Homo sapiensHistamine-Gi1/β1/γ22.72024-10-09doi.org/10.1038/s41467-024-52585-y
8YN5 (No Gprot) AAmineHistamineH3Homo sapiensHistamine-2.72024-10-09doi.org/10.1038/s41467-024-52585-y
8YN6AAmineHistamineH3Homo sapiensImetit-Gi1/β1/γ22.772024-10-09doi.org/10.1038/s41467-024-52585-y
8YN6 (No Gprot) AAmineHistamineH3Homo sapiensImetit-2.772024-10-09doi.org/10.1038/s41467-024-52585-y
8YNAAAmineHistamineH4Homo sapiensImmepip-Gi1/β1/γ22.632024-10-16doi.org/10.2210/pdb8YN7/pdb
8YNA (No Gprot) AAmineHistamineH4Homo sapiensImmepip-2.632024-10-16doi.org/10.2210/pdb8YN7/pdb




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Download 8YN8_nogp.zip



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