Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:Y71 6.46625817
2R:R:Y104 9.16434
3R:R:Y105 6.038508
4R:R:D113 5.658519
5R:R:D124 6.70833617
6R:R:N127 9.08415
7R:R:F128 6.702516
8R:R:W130 6.21407
9R:R:W135 7.89571719
10R:R:F137 7.5417
11R:R:Y145 8.36416
12R:R:Y146 9.092515
13R:R:F147 4.7225405
14R:R:R149 9.482517
15R:R:E150 8.18286716
16R:R:T153 5.59417
17R:R:Y154 6.966506
18R:R:Y168 7.7875458
19R:R:I171 3.68508
20R:R:M181 6.782546
21R:R:L210 6.2725415
22R:R:G222 1.845402
23R:R:F246 6.625418
24R:R:F317 7.71619
25R:R:W321 9.77518
26R:R:Y324 7.05625815
27R:R:H325 8.695417
28R:R:R327 8.65333615
29R:R:R328 7.225616
30R:R:Y351 10.14514
31R:R:N355 8.4325416
32R:R:Y359 8.808517
33R:R:N365 6.72419
34R:R:P366 5.05419
35R:R:Y369 6.36409
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:L117 R:R:Y359 32.45013.52NoYes067
2R:R:G78 R:R:L117 13.43461.71NoNo086
3R:R:L125 R:R:Y71 10.7468.21NoYes167
4R:R:N355 R:R:Y71 15.42194.65YesYes167
5R:R:L121 R:R:P122 10.62916.57NoNo079
6R:R:A362 R:R:D113 28.43664.63NoYes099
7R:R:A362 R:R:L117 28.15954.73NoNo096
8R:R:D113 R:R:N82 29.29384.04YesNo199
9R:R:D113 R:R:N365 63.47149.42YesYes199
10R:R:N82 R:R:P366 28.02968.15NoYes199
11R:R:N365 R:R:P366 28.94326.52YesYes199
12R:R:A110 R:R:T85 11.31753.36NoNo099
13R:R:P366 R:R:T85 46.04933.5YesNo099
14R:R:T85 R:R:Y369 34.55439.99NoYes099
15R:R:D103 R:R:L89 23.7655.43NoNo087
16R:R:L89 R:R:Y369 26.46668.21NoYes079
17R:R:L109 R:R:N365 35.29035.49NoYes099
18R:R:L109 R:R:N159 33.92229.61NoNo098
19R:R:N159 R:R:S108 32.5678.94NoNo089
20R:R:I190 R:R:S108 31.22487.74NoNo079
21R:R:I190 R:R:Y105 29.89136.04NoYes078
22R:R:D103 R:R:S100 12.91084.42NoNo087
23R:R:S100 R:R:Y104 10.18313.82NoYes074
24R:R:E166 R:R:Y105 14.53445.61NoYes098
25R:R:E166 R:R:M181 11.53839.47NoYes496
26R:R:N355 R:R:R327 17.58247.23YesYes165
27R:R:R327 R:R:Y324 38.66744.12YesYes155
28R:R:E150 R:R:Y324 29.02973.37YesYes165
29R:R:E150 R:R:N241 25.21119.2YesNo165
30R:R:N241 R:R:Y154 43.74166.98NoYes056
31R:R:S197 R:R:Y154 25.66572.54NoYes086
32R:R:A155 R:R:S197 22.02453.42NoNo078
33R:R:A155 R:R:W194 18.37476.48NoNo079
34R:R:L111 R:R:W194 14.71626.83NoNo069
35R:R:R328 R:R:Y324 19.851113.38YesYes165
36R:R:N241 R:R:R328 22.11543.62NoYes156
37R:R:L111 R:R:L115 11.04914.15NoNo066
38R:R:D113 R:R:T156 73.02685.78YesNo199
39R:R:D124 R:R:F128 20.59574.78YesYes176
40R:R:F128 R:R:W135 40.30835.01YesYes169
41R:R:D124 R:R:Y145 10.68973.45YesYes176
42R:R:N127 R:R:W135 12.075216.95YesYes159
43R:R:F128 R:R:Y146 28.92586.19YesYes165
44R:R:Y145 R:R:Y146 12.785212.91YesYes165
45R:R:L210 R:R:W135 16.05849.11YesYes159
46R:R:R149 R:R:Y146 33.24247.2YesYes175
47R:R:R149 R:R:Y324 14.13611.32YesYes175
48R:R:M208 R:R:Y146 15.945814.37NoYes055
49R:R:A201 R:R:E150 17.10611.51NoYes076
50R:R:A201 R:R:F147 13.0192.77NoYes075
51R:R:W321 R:R:Y324 69.93126.75YesYes185
52R:R:F317 R:R:W321 10020.04YesYes198
53R:R:A157 R:R:F317 80.44334.16NoYes079
54R:R:A157 R:R:P249 79.04063.74NoNo079
55R:R:P249 R:R:V161 74.78033.53NoNo097
56R:R:S164 R:R:V161 60.01653.23NoNo097
57R:R:N257 R:R:S164 56.95985.96NoNo099
58R:R:L310 R:R:N257 52.30985.49NoNo089
59R:R:L167 R:R:L310 50.72096.92NoNo098
60R:R:I171 R:R:L167 45.9674.28YesNo089
61R:R:L256 R:R:Y168 10.82828.21NoYes078
62R:R:L256 R:R:V252 14.36982.98NoNo075
63R:R:V161 R:R:V252 16.12763.21NoNo075
64R:R:I171 R:R:L264 27.9694.28YesNo088
65R:R:M204 R:R:T207 22.80824.52NoNo064
66R:R:T207 R:R:V237 12.56873.17NoNo047
67R:R:P203 R:R:V237 10.49491.77NoNo087
68R:R:M208 R:R:P227 13.30048.39NoNo055
69R:R:L210 R:R:L223 10.14856.92YesNo053
70R:R:P227 R:R:T226 15.61675.25NoNo053
71R:R:I238 R:R:R328 15.57785.01NoYes056
72R:R:F246 R:R:H325 22.154413.58YesYes187
73R:R:L264 R:R:V268 14.14042.98NoNo085
74R:R:V268 R:R:V300 12.47781.6NoNo053
75R:R:P297 R:R:V300 10.81537.07NoNo033
76R:R:L264 R:R:R304 12.60342.43NoNo086
77R:R:C320 R:R:S361 12.98446.89NoNo089
78R:R:S361 R:R:W321 14.5566.18NoYes098
79R:R:F350 R:R:R327 16.03675.34NoYes055
80R:R:F350 R:R:V326 13.48662.62NoNo055
81R:R:M330 R:R:V326 12.17044.56NoNo055
82R:R:I334 R:R:M330 10.84124.37NoNo035
83R:R:D124 R:R:Y359 27.237310.34YesYes177
84R:R:E150 R:R:T153 21.38379.88YesYes167
85R:R:T153 R:R:W321 33.79664.85YesYes178
86R:R:C320 R:R:V360 11.47771.71NoNo086
87R:R:F317 R:R:T156 74.77163.89YesNo199
88R:R:R149 R:R:T153 12.15743.88YesYes177
89R:R:E150 R:R:M204 21.26685.41YesNo066
90R:R:F246 R:R:F317 19.50474.29YesYes189
91R:R:R327 R:R:Y351 11.88915.43YesYes154
92R:R:H325 R:R:R328 16.44375.64YesYes176
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


PDB Summary
PDB 6Z66
Class A
SubFamily Peptide
Type Neurotensin
SubType NTS1
Species Rattus norvegicus
Ligand -
Other Ligand(s) -
Protein Partners -
PDB Resolution 3.19
Date 2021-02-10
D.O.I. 10.1126/sciadv.abe5504
Net Summary
Imin 3.23
Number of Linked Nodes 262
Number of Links 298
Number of Hubs 35
Number of Links mediated by Hubs 133
Number of Communities 5
Number of Nodes involved in Communities 49
Number of Links involved in Communities 76
Path Summary
Number Of Nodes in MetaPath 93
Number Of Links MetaPath 92
Number of Shortest Paths 59997
Length Of Smallest Path 3
Average Path Length 13.3922
Length of Longest Path 30
Minimum Path Strength 1.4
Average Path Strength 6.22205
Maximum Path Strength 15.535
Minimum Path Correlation 0.7
Average Path Correlation 0.935974
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 4.7619
Average % Of Corr. Nodes 58.9704
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 41.9256
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier
SCOP2Family Identifier
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP20789
Sequence
>6Z66_Chain_R
NTDIYSKVL VTAIYLALF VVGTVGNGV TLFTLARKS LQSRVDYYL 
GSLALSDLL ILLFALPVD LYNFIWVHH PWAFGDAGC KGYYFLREA 
CTYATALNV VSLSVELYL AICHPFKAK TLMSRSRTK KFISAIWLA 
SALLAIPML FTMGLQNLS GGLVCTPIV DTATLRVVI QLNTFMSFL 
FPMLVASIL NTVAARRLT VMVHQAAFN MTIEPGRVQ ALRRGVLVL 
RAVVIAFVV CWLPYHVRR LMFVYISDE QWTTALFDF YHYFYMLSN 
ALVYVSAAI NPILYNL


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
3ZEVAPeptideNeurotensinNTS1Rattus norvegicusNeurotensin--32014-01-2910.1073/pnas.1317903111
4BUOAPeptideNeurotensinNTS1Rattus norvegicusNeurotensin--2.752014-01-2910.1073/pnas.1317903111
4BV0APeptideNeurotensinNTS1Rattus norvegicusNeurotensin--3.12014-01-2910.1073/pnas.1317903111
4BWBAPeptideNeurotensinNTS1Rattus norvegicusNeurotensin--3.572014-01-2910.1073/pnas.1317903111
4GRVAPeptideNeurotensinNTS1Rattus norvegicusNeurotensin 8-13--2.82012-10-1710.1038/nature11558
4XEEAPeptideNeurotensinNTS1Rattus norvegicusNeurotensin--2.92015-07-2910.1038/ncomms8895
4XESAPeptideNeurotensinNTS1Rattus norvegicusNeurotensin--2.62015-07-2910.1038/ncomms8895
5T04APeptideNeurotensinNTS1Rattus norvegicusNeurotensin--3.32016-12-2110.1038/srep38564
6OS9APeptideNeurotensinNTS1Homo sapiensJMV449-Gi1/&β;1/&γ;232019-07-1010.1038/s41586-019-1337-6
6OSAAPeptideNeurotensinNTS1Homo sapiensJMV449-Gi1/&β;1/&γ;232019-07-1010.1038/s41586-019-1337-6
6PWCAPeptideNeurotensinNTS1Homo sapiensNeurotensin-Arrestin24.92019-12-0410.1038/s41422-019-0256-2
6UP7APeptideNeurotensinNTS1Homo sapiensNeurotensin-Arrestin24.22020-02-2610.1038/s41586-020-1953-1
6YVRAPeptideNeurotensinNTS1Rattus norvegicusNTS8-13--2.462021-02-1010.1126/sciadv.abe5504
6Z4QAPeptideNeurotensinNTS1Rattus norvegicusSR142948A--2.922021-02-1010.1126/sciadv.abe5504
6Z4SAPeptideNeurotensinNTS1Rattus norvegicusSR48692--2.712021-02-1010.1126/sciadv.abe5504
6Z4VAPeptideNeurotensinNTS1Rattus norvegicusNTS8-13--2.62021-02-1010.1126/sciadv.abe5504
6Z8NAPeptideNeurotensinNTS1Rattus norvegicusSRI-9829--2.82021-02-1010.1126/sciadv.abe5504
6ZA8APeptideNeurotensinNTS1Rattus norvegicusRTI-3a--2.722021-02-1010.1126/sciadv.abe5504
6ZINAPeptideNeurotensinNTS1Rattus norvegicusSR48692--2.642021-02-1010.1126/sciadv.abe5504
7L0PAPeptideNeurotensinNTS1Rattus norvegicusNeurotensin-Gi1/&β;1/&γ;14.12021-01-0610.1038/s41594-020-00554-6
7L0QAPeptideNeurotensinNTS1Rattus norvegicusNeurotensin-Gi1/&β;1/&γ;14.32021-01-0610.1038/s41594-020-00554-6
7L0RAPeptideNeurotensinNTS1Rattus norvegicusNeurotensin-Gi1/&β;1/&γ;14.22021-01-0610.1038/s41594-020-00554-6
7L0SAPeptideNeurotensinNTS1Rattus norvegicusNeurotensin-Gi1/&β;1/γ14.52021-01-0610.1038/s41594-020-00554-6
7UL2APeptideNeurotensinNTS1Homo sapiensSR48692Na-2.42022-06-2910.1038/s41594-022-00859-8
8FMZAPeptideNeurotensinNTS1Rattus norvegicusNeurotensin/neuromedin N-chim(NtGi2L-Gs-CtGq)/&β;1/&γ;22.592023-03-2910.1021/acs.biochem.3c00029
8FN0APeptideNeurotensinNTS1Rattus norvegicusNeurotensin/neuromedin NPubChem 118610427chim(NtGi1-Go)/&β;1/&γ;22.892023-03-2910.1021/acs.biochem.3c00029
8FN1APeptideNeurotensinNTS1Rattus norvegicusNeurotensin/neuromedin N-chim(NtGi1-Go)/&β;1/&γ;22.882023-03-2910.1021/acs.biochem.3c00029
8JPBAPeptideNeurotensinNTS1Homo sapiensNeurotensin 8-13PubChem 118610427; GDP; MgGq; GRK23.072023-08-0910.1038/s41586-023-06395-9
8JPCAPeptideNeurotensinNTS1Homo sapiensNeurotensin 8-13PubChem 118610427; GDP; MgGq; GRK23.072023-08-0910.1038/s41586-023-06395-9
8JPFAPeptideNeurotensinNTS1Homo sapiensNeurotensinPubChem 118610427-3.022023-08-0910.1038/s41586-023-06395-9
6YVR (Dimer)APeptideNeurotensinNTS1Rattus norvegicusNTS8-13--2.462021-02-1010.1126/sciadv.abe5504




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 6Z66.zip



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