Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:Y60 5.2775418
2R:R:N71 7.535409
3R:R:V74 4.0775429
4R:R:V77 5.5425407
5R:R:L78 4.56527
6R:R:D89 5.3225428
7R:R:F91 5.93607
8R:R:V103 4.64406
9R:R:L106 6.108518
10R:R:W117 8.445659
11R:R:F135 7.356517
12R:R:Y136 5.96506
13R:R:D148 6.512508
14R:R:Y150 6.77668
15R:R:L151 5.5675405
16R:R:V168 3.965408
17R:R:F182 5.0525405
18R:R:F187 5.554504
19R:R:H193 12.5475473
20R:R:F207 4.5875404
21R:R:F224 10.8825408
22R:R:P227 4.06409
23R:R:Y235 6.61638
24R:R:L242 2.905408
25R:R:W268 8.36619
26R:R:T269 4.74405
27R:R:Y271 6.44506
28R:R:H272 8.592518
29R:R:V275 5.01485
30R:R:I279 4.87485
31R:R:M281 3.56643
32R:R:D282 4.32542
33R:R:Y308 8.395416
34R:R:Y318 5.108539
35R:R:F325 7.1528
36R:R:R328 3.172525
37L:L:?1 11.0771010
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:L106 R:R:Y60 25.45727.03YesYes188
2L:L:?1 R:R:Y60 27.45614.77YesYes108
3L:L:?1 R:R:Y308 26.349122.27YesYes106
4R:R:L106 R:R:Y308 25.45723.52YesYes186
5R:R:L106 R:R:V103 42.30914.47YesYes086
6R:R:G67 R:R:V103 11.46923.68NoYes086
7R:R:N71 R:R:V103 27.15582.96YesYes096
8R:R:D99 R:R:N71 15.995914.81NoYes099
9L:L:?1 R:R:W268 71.19045.41YesYes109
10R:R:H310 R:R:W268 99.18889.52NoYes099
11R:R:H310 R:R:N314 97.104711.48NoNo099
12R:R:N314 R:R:Y318 96.48174.65NoYes099
13R:R:I145 R:R:Y318 91.01834.84NoYes399
14R:R:F91 R:R:I145 1003.77YesNo079
15R:R:F91 R:R:V168 61.03897.87YesYes078
16R:R:T90 R:R:V168 58.29153.17NoYes068
17R:R:L85 R:R:T90 56.89322.95NoNo066
18R:R:D89 R:R:L85 27.82368.14YesNo286
19R:R:D89 R:R:L78 25.07625.43YesYes287
20R:R:F325 R:R:L78 12.59416.09YesYes287
21R:R:F325 R:R:V77 12.96169.18YesYes087
22R:R:R328 R:R:V77 22.00163.92YesYes057
23R:R:L85 R:R:R328 27.63984.86NoYes265
24R:R:D148 R:R:F91 34.34924.78YesYes087
25R:R:C311 R:R:D99 13.73710.89NoNo089
26R:R:C311 R:R:L102 11.46924.76NoNo086
27L:L:?1 R:R:W109 24.394911.59YesNo005
28R:R:L108 R:R:W109 23.37315.69NoNo065
29R:R:L108 R:R:W117 19.87724.56NoYes069
30R:R:D186 R:R:F187 53.30765.97NoYes044
31R:R:D186 R:R:N132 56.82148.08NoNo044
32R:R:F131 R:R:N132 41.5744.83NoNo054
33L:L:?1 R:R:F131 26.913810.74YesNo105
34R:R:F135 R:R:Y136 27.45164.13YesYes076
35R:R:H272 R:R:W268 25.07625.29YesYes189
36R:R:H272 R:R:Y271 20.94393.27YesYes086
37L:L:?1 R:R:Y271 34.515112.72YesYes006
38R:R:F264 R:R:W268 22.203315.03NoYes099
39R:R:F264 R:R:M231 24.74459.95NoNo098
40R:R:M231 R:R:Y235 22.96523.59NoYes388
41R:R:R149 R:R:Y235 11.1518.23NoYes398
42R:R:L151 R:R:R167 24.36366.07YesNo054
43R:R:D148 R:R:R167 30.82654.76YesNo084
44R:R:L151 R:R:Y150 19.3173.52YesYes058
45R:R:L242 R:R:M254 11.11062.83YesNo086
46R:R:L239 R:R:M254 14.2394.24NoNo056
47R:R:L239 R:R:V257 18.85985.96NoNo057
48R:R:V257 R:R:Y235 20.38818.83NoYes078
49R:R:F187 R:R:I188 36.02555.02YesNo044
50R:R:F189 R:R:I188 33.82486.28NoNo054
51R:R:F189 R:R:F207 31.61538.57NoYes054
52R:R:F207 R:R:L215 20.42852.44YesNo045
53R:R:L215 R:R:Y205 18.42064.69NoNo053
54R:R:H202 R:R:Q204 11.58126.18NoNo033
55R:R:Q204 R:R:Y205 13.87154.51NoNo033
56R:R:K300 R:R:Y271 28.37492.39NoYes056
57R:R:K300 R:R:V296 26.88691.52NoNo054
58R:R:M281 R:R:V296 25.38541.52YesNo034
59R:R:V275 R:R:Y271 14.8538.83YesYes056
60R:R:F224 R:R:H272 11.177827.15YesYes088
61R:R:F320 R:R:F325 19.08395.36NoYes078
62R:R:F320 R:R:L316 15.86594.87NoNo076
63R:R:L313 R:R:L316 12.63891.38NoNo066
64R:R:M281 R:R:R292 12.33422.48YesNo033
65R:R:F131 R:R:F135 16.097.5NoYes157
66R:R:F135 R:R:W268 35.290411.02YesYes179
67R:R:N132 R:R:Y136 17.43014.65NoYes046
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
R:R:L106 R:R:Y60 7.03 1 Yes Yes 8 8 2 1
R:R:A110 R:R:Y60 5.34 0 No Yes 7 8 2 1
R:R:Y308 R:R:Y60 3.97 1 Yes Yes 6 8 1 1
L:L:?1 R:R:Y60 4.77 1 Yes Yes 0 8 0 1
R:R:L106 R:R:Y308 3.52 1 Yes Yes 8 6 2 1
R:R:L108 R:R:W109 5.69 0 No No 6 5 2 1
L:L:?1 R:R:W109 11.59 1 Yes No 0 5 0 1
R:R:F131 R:R:N132 4.83 1 No No 5 4 1 2
R:R:F131 R:R:F135 7.5 1 No Yes 5 7 1 1
L:L:?1 R:R:F131 10.74 1 Yes No 0 5 0 1
R:R:N132 R:R:Y136 4.65 0 No Yes 4 6 2 2
R:R:F135 R:R:Y136 4.13 1 Yes Yes 7 6 1 2
R:R:F135 R:R:W268 11.02 1 Yes Yes 7 9 1 1
R:R:F135 R:R:H272 3.39 1 Yes Yes 7 8 1 2
L:L:?1 R:R:F135 10.74 1 Yes Yes 0 7 0 1
R:R:A139 R:R:W268 3.89 0 No Yes 8 9 2 1
R:R:F264 R:R:W268 15.03 0 No Yes 9 9 2 1
R:R:H272 R:R:W268 5.29 1 Yes Yes 8 9 2 1
R:R:H310 R:R:W268 9.52 0 No Yes 9 9 2 1
L:L:?1 R:R:W268 5.41 1 Yes Yes 0 9 0 1
R:R:H272 R:R:Y271 3.27 1 Yes Yes 8 6 2 1
R:R:V275 R:R:Y271 8.83 8 Yes Yes 5 6 2 1
R:R:T303 R:R:Y271 4.99 0 No Yes 7 6 2 1
L:L:?1 R:R:Y271 12.72 1 Yes Yes 0 6 0 1
R:R:S304 R:R:Y308 3.82 1 No Yes 5 6 1 1
L:L:?1 R:R:S304 23.43 1 Yes No 0 5 0 1
L:L:?1 R:R:G307 6.96 1 Yes No 0 8 0 1
L:L:?1 R:R:Y308 22.27 1 Yes Yes 0 6 0 1
R:R:K300 R:R:Y271 2.39 0 No Yes 5 6 2 1
L:L:?1 R:R:A113 2.14 1 Yes No 0 5 0 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 8HNM_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 2.95
Number of Linked Nodes 244
Number of Links 270
Number of Hubs 37
Number of Links mediated by Hubs 147
Number of Communities 8
Number of Nodes involved in Communities 41
Number of Links involved in Communities 51
Path Summary
Number Of Nodes in MetaPath 68
Number Of Links MetaPath 67
Number of Shortest Paths 48971
Length Of Smallest Path 3
Average Path Length 13.4119
Length of Longest Path 31
Minimum Path Strength 1.19
Average Path Strength 6.23138
Maximum Path Strength 18.115
Minimum Path Correlation 0.7
Average Path Correlation 0.926575
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 3.57143
Average % Of Corr. Nodes 51.0615
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 45.793
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain   • Ras-like P-loop GTPases
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain   • Ras-like P-loop GTPases
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
Code4IE
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
Code4IE
Name[4-(2-bromophenyl)phenyl]methyl-[[(1R,5S)-6,6-dimethyl-2-bicyclo[3.1.1]hept-2-enyl]methyl]-dimethyl-azanium
SynonymsVUF11222
Identifier
FormulaC25 H31 Br N
Molecular Weight425.424
SMILES
PubChem71459295
Formal Charge1
Total Atoms58
Total Chiral Atoms2
Total Bonds61
Total Aromatic Bonds12

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP49682
Sequence
>8HNM_nogp_Chain_R
YSLLFLLGL LGNGAVAAV LLSRRTALS STDTFLLHL AVADTLLVL 
TLPLWAVDA AVQWVFGSG LCKVAGALF NINFYAGAL LLACISFDR 
YLNIVHATQ LYRRGPPAR VTLTCLAVW GLCLLFALP DFIFLSAHH 
DERLNATHC QYNFPQVGR TALRVLQLV AGFLLPLLV MAYCYAHIL 
AVLLVSRGQ RRLRAMRLV VVVVVAFAL CWTPYHLVV LVDILMDLG 
ALARNCGRE SRVDVAKSV TSGLGYMHC CLNPLLYAF VGVKFRERM 
WMLLLRL


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
8HNKAProteinChemokineCXCR3Homo sapiensCXCL11-Gi1/β1/γ23.012023-11-29doi.org/10.1038/s41594-023-01175-5
8HNK (No Gprot) AProteinChemokineCXCR3Homo sapiensCXCL11-3.012023-11-29doi.org/10.1038/s41594-023-01175-5
8HNLAProteinChemokineCXCR3Homo sapiensPS372424-Gi1/β1/γ22.982023-11-29doi.org/10.1038/s41594-023-01175-5
8HNL (No Gprot) AProteinChemokineCXCR3Homo sapiensPS372424-2.982023-11-29doi.org/10.1038/s41594-023-01175-5
8HNMAProteinChemokineCXCR3Homo sapiensVUF11222-Gi1/β1/γ22.942023-11-29doi.org/10.1038/s41594-023-01175-5
8HNM (No Gprot) AProteinChemokineCXCR3Homo sapiensVUF11222-2.942023-11-29doi.org/10.1038/s41594-023-01175-5
8HNNAProteinChemokineCXCR3Homo sapiens-SCH546738-3.62023-11-29doi.org/10.1038/s41594-023-01175-5
8K2WAProteinChemokineCXCR3Homo sapiensAMG487--32023-11-29doi.org/10.1038/s41594-023-01175-5
8K2XAProteinChemokineCXCR3Homo sapiensCXCL10-Gi1/β1/γ23.22023-11-29doi.org/10.1038/s41594-023-01175-5
8K2X (No Gprot) AProteinChemokineCXCR3Homo sapiensCXCL10-3.22023-11-29doi.org/10.1038/s41594-023-01175-5
8XXYAProteinChemokineCXCR3Homo sapiens---3.682025-02-26doi.org/10.1038/s41467-025-58264-w
8XXZAProteinChemokineCXCR3Homo sapiens--Go/β1/γ23.32025-02-26doi.org/10.1038/s41467-025-58264-w
8XXZ (No Gprot) AProteinChemokineCXCR3Homo sapiens--3.32025-02-26doi.org/10.1038/s41467-025-58264-w
8XYIAProteinChemokineCXCR3Homo sapiensVUF10661--3.162025-02-26doi.org/10.1038/s41467-025-58264-w
8XYKAProteinChemokineCXCR3Homo sapiensVUF10661-Go/β1/γ23.032025-02-26doi.org/10.1038/s41467-025-58264-w
8XYK (No Gprot) AProteinChemokineCXCR3Homo sapiensVUF10661-3.032025-02-26doi.org/10.1038/s41467-025-58264-w
8Y0HAProteinChemokineCXCR3Homo sapiensVUF11418--3.532025-02-26doi.org/10.1038/s41467-025-58264-w
8Y0NAProteinChemokineCXCR3Homo sapiensVUF11418-Go/β1/γ23.072025-02-26doi.org/10.1038/s41467-025-58264-w
8Y0N (No Gprot) AProteinChemokineCXCR3Homo sapiensVUF11418-3.072025-02-26doi.org/10.1038/s41467-025-58264-w




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Download 8HNM_nogp.zip



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