Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:Y60 5.135408
2R:R:N71 5.208509
3R:R:V74 3.808539
4R:R:D89 5.7825448
5R:R:F91 4.782517
6R:R:L93 3.535406
7R:R:H94 6.1275409
8R:R:L95 6.515419
9R:R:D99 6.96419
10R:R:L106 5.66418
11R:R:W109 4.008515
12R:R:W117 7.855629
13R:R:F119 7.9325427
14R:R:F131 8.69515
15R:R:I133 2.875406
16R:R:N134 6.4458
17R:R:F135 5.19417
18R:R:L142 4.44518
19R:R:R149 5.0425419
20R:R:Y150 5.745618
21R:R:W176 3.96509
22R:R:F182 5.455405
23R:R:F189 11.245405
24R:R:Y205 4.02403
25R:R:F224 8.925418
26R:R:M231 5.99418
27R:R:Y235 5.6925818
28R:R:R250 5.45406
29R:R:F264 9.585419
30R:R:W268 7.56719
31R:R:Y271 7.616516
32R:R:H272 8.12518
33R:R:V274 3.1775404
34R:R:R292 5.986573
35R:R:C312 2.48408
36R:R:N314 4.984519
37R:R:L317 1.7525408
38R:R:Y318 4.81719
39R:R:F325 8.1575438
40L:L:?1 7.64910
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:D99 R:R:N71 57.57845.39YesYes099
2R:R:G67 R:R:N71 11.40431.7NoYes089
3L:L:?1 R:R:W109 13.38612.57YesYes105
4L:L:?1 R:R:W268 31.40434.5YesYes109
5R:R:H310 R:R:W268 47.22379.52NoYes099
6R:R:H310 R:R:N314 47.15332.55NoYes099
7R:R:D99 R:R:N314 48.09736.73YesYes199
8R:R:N71 R:R:P315 45.089411.4YesNo099
9R:R:P315 R:R:V74 41.1141.77NoYes099
10R:R:A319 R:R:V74 27.00673.39NoYes379
11R:R:A319 R:R:L92 26.59634.73NoNo078
12R:R:L78 R:R:L92 25.07184.15NoNo078
13R:R:L78 R:R:L85 17.40844.15NoNo076
14R:R:R149 R:R:T88 11.52152.59YesNo098
15R:R:M231 R:R:Y235 19.87692.39YesYes188
16R:R:F264 R:R:M231 29.69811.2YesYes198
17R:R:F264 R:R:W268 45.177421.05YesYes199
18R:R:L142 R:R:Y318 15.79015.86YesYes189
19R:R:F264 R:R:L142 18.00652.44YesYes198
20R:R:N314 R:R:Y318 28.55474.65YesYes199
21R:R:H94 R:R:W176 19.79487.41YesYes099
22R:R:N134 R:R:W176 21.04372.26YesYes089
23R:R:L102 R:R:N134 21.1146.87NoYes068
24R:R:F131 R:R:L102 22.67379.74YesNo056
25R:R:I145 R:R:Y318 17.99476.04NoYes199
26R:R:F91 R:R:I145 21.70043.77YesNo179
27R:R:L141 R:R:L95 19.73034.15NoYes089
28R:R:L142 R:R:L95 13.62655.54YesYes189
29R:R:F119 R:R:W117 14.72314.03YesYes279
30R:R:C203 R:R:W117 30.37822.61NoYes299
31R:R:C203 R:R:L190 33.84343.17NoNo095
32R:R:L190 R:R:Y205 35.50867.03NoYes053
33R:R:R212 R:R:Y205 64.77872.06NoYes043
34R:R:R212 R:R:R216 70.32542.13NoNo043
35R:R:D278 R:R:R216 79.75964.76NoNo053
36R:R:D278 R:R:D282 81.078911.98NoNo052
37R:R:D282 R:R:R288 82.36889.53NoNo024
38R:R:M281 R:R:R288 84.77282.48NoNo034
39R:R:L286 R:R:M281 83.77025.65NoNo713
40R:R:L280 R:R:L286 95.47352.77NoNo041
41R:R:L276 R:R:L280 97.76022.77NoNo054
42R:R:L220 R:R:L276 98.8862.77NoNo045
43R:R:H272 R:R:L220 1003.86YesNo084
44R:R:F135 R:R:H272 22.05222.26YesYes178
45R:R:H272 R:R:W268 69.60424.23YesYes189
46R:R:H272 R:R:Y271 20.03527.62YesYes186
47L:L:?1 R:R:Y271 16.147817.88YesYes106
48R:R:D112 R:R:W117 11.12878.93NoYes059
49R:R:F119 R:R:V118 11.14635.24YesNo073
50R:R:F189 R:R:N206 11.14633.62YesNo054
51R:R:F189 R:R:P185 21.87632.89YesNo057
52R:R:D186 R:R:P185 27.0831.61NoNo047
53R:R:D186 R:R:Y205 30.4722.3NoYes043
54R:R:I133 R:R:W176 11.60362.35YesYes069
55R:R:A137 R:R:C179 10.0851.81NoNo078
56R:R:A137 R:R:W176 13.19265.19NoYes079
57R:R:A139 R:R:W268 10.37232.59NoYes089
58R:R:M231 R:R:S146 20.21116.13YesNo189
59R:R:C234 R:R:S146 26.93641.72NoNo179
60R:R:C234 R:R:Y150 18.83915.38NoYes178
61R:R:I238 R:R:Y235 19.53682.42NoYes088
62R:R:I279 R:R:R216 11.14633.76NoNo053
63R:R:I238 R:R:L242 15.84872.85NoNo088
64R:R:L242 R:R:M254 11.95544.24NoNo086
65R:R:T303 R:R:Y271 14.18944.99NoYes076
66R:R:T303 R:R:V274 11.28113.17NoYes074
67R:R:L286 R:R:R292 10.536510.93NoYes713
68R:R:D99 R:R:L95 11.94969.5YesYes199
69R:R:H94 R:R:L141 17.76022.57YesNo098
70R:R:F131 R:R:F135 18.48144.29YesYes157
71R:R:L142 R:R:M231 11.59194.24YesYes188
72R:R:Y235 R:R:Y318 17.65464.96YesYes189
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
R:R:L106 R:R:Y60 2.34 1 Yes Yes 8 8 2 2
R:R:W109 R:R:Y60 4.82 1 Yes Yes 5 8 1 2
R:R:F131 R:R:L102 9.74 1 Yes No 5 6 1 2
R:R:F131 R:R:T105 2.59 1 Yes No 5 7 1 2
R:R:L106 R:R:Y308 11.72 1 Yes No 8 6 2 1
R:R:A113 R:R:W109 2.59 0 No Yes 5 5 2 1
R:R:S304 R:R:W109 8.65 1 No Yes 5 5 1 1
L:L:?1 R:R:W109 2.57 1 Yes Yes 0 5 0 1
R:R:F131 R:R:F135 4.29 1 Yes Yes 5 7 1 1
R:R:F131 R:R:Y308 6.19 1 Yes No 5 6 1 1
L:L:?1 R:R:F131 20.64 1 Yes Yes 0 5 0 1
R:R:F135 R:R:W268 8.02 1 Yes Yes 7 9 1 1
R:R:F135 R:R:H272 2.26 1 Yes Yes 7 8 1 2
L:L:?1 R:R:F135 6.19 1 Yes Yes 0 7 0 1
R:R:A139 R:R:W268 2.59 0 No Yes 8 9 2 1
R:R:F224 R:R:W268 3.01 1 Yes Yes 8 9 2 1
R:R:F224 R:R:H272 22.63 1 Yes Yes 8 8 2 2
R:R:F264 R:R:W268 21.05 1 Yes Yes 9 9 2 1
R:R:H272 R:R:W268 4.23 1 Yes Yes 8 9 2 1
R:R:H310 R:R:W268 9.52 0 No Yes 9 9 2 1
L:L:?1 R:R:W268 4.5 1 Yes Yes 0 9 0 1
R:R:H272 R:R:Y271 7.62 1 Yes Yes 8 6 2 1
R:R:V275 R:R:Y271 5.05 0 No Yes 5 6 2 1
R:R:T303 R:R:Y271 4.99 0 No Yes 7 6 2 1
R:R:S304 R:R:Y271 2.54 1 No Yes 5 6 1 1
L:L:?1 R:R:Y271 17.88 1 Yes Yes 0 6 0 1
L:L:?1 R:R:S304 5.94 1 Yes No 0 5 0 1
L:L:?1 R:R:G307 5.8 1 Yes No 0 8 0 1
L:L:?1 R:R:Y308 3.31 1 Yes No 0 6 0 1
R:R:A127 R:R:G128 1.95 0 No No 5 6 2 1
L:L:?1 R:R:G128 1.93 1 Yes No 0 6 0 1
R:R:G307 R:R:L306 1.71 0 No No 8 8 1 2
R:R:G305 R:R:W109 1.41 0 No Yes 5 5 2 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 8Y0N_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 2.06
Number of Linked Nodes 254
Number of Links 289
Number of Hubs 40
Number of Links mediated by Hubs 154
Number of Communities 7
Number of Nodes involved in Communities 55
Number of Links involved in Communities 78
Path Summary
Number Of Nodes in MetaPath 73
Number Of Links MetaPath 72
Number of Shortest Paths 40667
Length Of Smallest Path 3
Average Path Length 13.878
Length of Longest Path 36
Minimum Path Strength 1.285
Average Path Strength 5.35309
Maximum Path Strength 19.26
Minimum Path Correlation 0.7
Average Path Correlation 0.922188
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 3.0303
Average % Of Corr. Nodes 48.3584
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 41.5789
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function• phosphorus-oxygen lyase activity   • enzyme regulator activity   • cyclase regulator activity   • molecular function regulator activity   • cyclase activity   • adenylate cyclase regulator activity   • lyase activity   • catalytic activity   • adenylate cyclase activity   • mu-type opioid receptor binding   • protein binding   • binding   • signaling receptor binding   • G protein-coupled receptor binding   • opioid receptor binding   • guanyl nucleotide binding   • GTP binding   • nucleotide binding   • guanyl ribonucleotide binding   • purine ribonucleotide binding   • purine ribonucleoside triphosphate binding   • nucleoside phosphate binding   • ion binding   • purine nucleotide binding   • anion binding   • heterocyclic compound binding   • carbohydrate derivative binding   • ribonucleotide binding   • small molecule binding   • peptide hormone receptor binding   • corticotropin-releasing hormone receptor binding   • corticotropin-releasing hormone receptor 1 binding   • hormone receptor binding   • neuropeptide receptor binding   • G protein-coupled serotonin receptor binding   • protein-containing complex binding   • G-protein beta/gamma-subunit complex binding   • pyrophosphatase activity   • GTPase activity   • G protein activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • cation binding   • metal ion binding   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • cell communication   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction
Gene OntologyBiological Process• cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • cell communication   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction   • heart process   • multicellular organismal process   • system process   • regulation of heart contraction   • regulation of system process   • circulatory system process   • regulation of blood circulation   • regulation of multicellular organismal process   • heart contraction   • blood circulation   • behavior   • locomotory behavior   • transport   • secretion   • export from cell   • membrane docking   • establishment of localization   • vesicle-mediated transport   • localization   • organelle localization by membrane tethering   • secretion by cell   • exocytosis   • organelle localization   • vesicle docking   • exocytic process   • vesicle docking involved in exocytosis   • cellular response to nitrogen compound   • response to dopamine   • cellular response to dopamine   • response to monoamine   • response to catecholamine   • cellular response to catecholamine stimulus   • G protein-coupled dopamine receptor signaling pathway   • response to oxygen-containing compound   • response to nitrogen compound   • cellular response to oxygen-containing compound   • cellular response to chemical stimulus   • cellular response to monoamine stimulus   • response to chemical   • protein localization   • negative regulation of protein transport   • regulation of localization   • establishment of protein localization   • nitrogen compound transport   • negative regulation of biological process   • negative regulation of transport   • negative regulation of secretion   • cellular macromolecule localization   • negative regulation of hormone secretion   • negative regulation of secretion by cell   • regulation of biological quality   • regulation of peptide hormone secretion   • negative regulation of peptide hormone secretion   • regulation of hormone levels   • establishment of protein localization to extracellular region   • negative regulation of establishment of protein localization   • protein secretion   • regulation of protein secretion   • regulation of secretion   • negative regulation of protein secretion   • cellular localization   • regulation of hormone secretion   • regulation of protein localization   • regulation of peptide secretion   • negative regulation of signaling   • hormone secretion   • negative regulation of cell communication   • protein localization to extracellular region   • negative regulation of peptide secretion   • peptide secretion   • regulation of secretion by cell   • amide transport   • signal release   • negative regulation of cellular process   • negative regulation of protein localization   • regulation of signaling   • regulation of transport   • regulation of peptide transport   • regulation of establishment of protein localization   • cell-cell signaling   • regulation of protein transport   • peptide transport   • negative regulation of insulin secretion   • protein transport   • regulation of cellular localization   • regulation of insulin secretion   • peptide hormone secretion   • macromolecule localization   • hormone transport   • regulation of cell communication   • insulin secretion   • trans-synaptic signaling   • modulation of chemical synaptic transmission   • chemical synaptic transmission   • synaptic signaling   • regulation of trans-synaptic signaling   • anterograde trans-synaptic signaling   • postsynaptic modulation of chemical synaptic transmission   • muscle contraction   • muscle system process   • cell periphery   • postsynapse   • cellular anatomical structure   • postsynaptic membrane   • synapse   • cell junction   • membrane   • plasma membrane   • plasma membrane region   • synaptic membrane   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex
Gene OntologyCellular Component• cell periphery   • postsynapse   • cellular anatomical structure   • postsynaptic membrane   • synapse   • cell junction   • membrane   • plasma membrane   • plasma membrane region   • synaptic membrane   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cytoplasmic side of plasma membrane   • GTPase complex   • extrinsic component of membrane   • extrinsic component of cytoplasmic side of plasma membrane   • parallel fiber to Purkinje cell synapse   • excitatory synapse   • presynapse   • presynaptic membrane   • somatodendritic compartment   • cell projection   • dendrite   • dendritic tree   • neuron projection   • plasma membrane bounded cell projection   • intracellular anatomical structure   • cytoplasm   • GABA-ergic synapse   • glutamatergic synapse   • cell body   • protein binding   • binding   • enzyme binding   • GTPase binding   • protein-containing complex binding   • pyrophosphatase activity   • GTPase activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • signaling receptor complex adaptor activity   • protein-macromolecule adaptor activity   • molecular adaptor activity   • signaling adaptor activity   • multicellular organismal process   • system process   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of taste   • developmental process   • sensory organ development   • eye development   • animal organ development   • retina development in camera-type eye   • visual system development   • multicellular organism development   • camera-type eye development   • anatomical structure development   • sensory system development   • system development   • cell population proliferation   • cellular process   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • signal transduction   • cell communication   • response to ketone   • response to prostaglandin   • response to lipid   • response to endogenous stimulus   • response to alcohol   • cellular response to prostaglandin stimulus   • response to oxygen-containing compound   • cellular response to oxygen-containing compound   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to chemical stimulus   • cellular response to alcohol   • response to hormone   • response to chemical   • cellular response to lipid   • response to prostaglandin E   • cellular response to ketone   • cellular response to hormone stimulus   • small GTPase-mediated signal transduction   • Ras protein signal transduction   • intracellular signal transduction   • intracellular signaling cassette   • phospholipase C-activating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular response to nitrogen compound   • response to dopamine   • cellular response to dopamine   • response to monoamine   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • G protein-coupled dopamine receptor signaling pathway   • response to nitrogen compound   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cellular response to monoamine stimulus   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • synaptic signaling   • cellular response to acetylcholine   • cell-cell signaling   • acetylcholine receptor signaling pathway   • postsynaptic signal transduction   • G protein-coupled acetylcholine receptor signaling pathway   • response to acetylcholine   • extracellular exosome   • membrane-bounded organelle   • extracellular vesicle   • extracellular organelle   • extracellular region   • organelle   • extracellular space   • vesicle   • extracellular membrane-bounded organelle   • non-motile cilium   • 9+0 non-motile cilium   • cilium   • photoreceptor disc membrane   • photoreceptor outer segment   • photoreceptor cell cilium   • organelle membrane   • cytosol   • vacuolar membrane   • lytic vacuole   • vacuole   • intracellular membrane-bounded organelle   • intracellular organelle   • lytic vacuole membrane   • bounding membrane of organelle   • lysosomal membrane   • lysosome   • G-protein beta-subunit binding   • fibroblast proliferation   • molecular transducer activity   • signaling receptor activity   • G protein-coupled chemoattractant receptor activity   • C-C chemokine receptor activity   • chemokine receptor activity   • G protein-coupled receptor activity   • transmembrane signaling receptor activity   • cytokine receptor activity   • immune receptor activity   • chemokine binding   • cytokine binding   • C-X-C chemokine receptor activity   • C-C chemokine binding   • C-X-C chemokine binding   • positive regulation of cytosolic calcium ion concentration   • regulation of biological quality   • cell adhesion   • regulation of cell adhesion   • blood vessel morphogenesis   • tube development   • angiogenesis   • vasculature development   • circulatory system development   • anatomical structure morphogenesis   • tube morphogenesis   • anatomical structure formation involved in morphogenesis   • blood vessel development   • immune response   • immune system process   • chemotaxis   • positive regulation of locomotion   • regulation of response to external stimulus   • positive regulation of biological process   • response to external stimulus   • regulation of chemotaxis   • positive regulation of chemotaxis   • positive regulation of response to stimulus   • positive regulation of response to external stimulus   • taxis   • regulation of response to stimulus   • regulation of locomotion   • locomotion   • apoptotic process   • cell death   • programmed cell death   • calcium-mediated signaling   • positive regulation of programmed cell death   • regulation of apoptotic process   • regulation of programmed cell death   • positive regulation of apoptotic process   • regulation of execution phase of apoptosis   • positive regulation of execution phase of apoptosis   • execution phase of apoptosis   • positive regulation of cellular process   • negative regulation of programmed cell death   • negative regulation of biological process   • negative regulation of execution phase of apoptosis   • negative regulation of apoptotic process   • negative regulation of cellular process   • positive regulation of cell population proliferation   • regulation of cell population proliferation   • cell chemotaxis   • cell migration   • cell motility   • cell surface receptor signaling pathway   • regulation of developmental process   • regulation of vasculature development   • positive regulation of developmental process   • regulation of multicellular organismal process   • regulation of anatomical structure morphogenesis   • regulation of multicellular organismal development   • positive regulation of angiogenesis   • positive regulation of vasculature development   • regulation of angiogenesis   • positive regulation of multicellular organismal process   • regulation of calcium ion transport   • regulation of localization   • positive regulation of cation transmembrane transport   • positive regulation of calcium ion transport   • intracellular calcium ion homeostasis   • calcium ion transport   • localization   • positive regulation of monoatomic ion transport   • positive regulation of monoatomic ion transmembrane transport   • monoatomic cation homeostasis   • monoatomic cation transport   • intracellular monoatomic ion homeostasis   • regulation of release of sequestered calcium ion into cytosol   • regulation of monoatomic ion transport   • inorganic ion transmembrane transport   • establishment of localization   • inorganic cation transmembrane transport   • maintenance of location   • transmembrane transport   • release of sequestered calcium ion into cytosol   • regulation of transmembrane transport   • chemical homeostasis   • cellular localization   • inorganic ion homeostasis   • transport   • homeostatic process   • monoatomic ion transmembrane transport   • calcium ion homeostasis   • regulation of monoatomic ion transmembrane transport   • negative regulation of sequestering of calcium ion   • metal ion transport   • maintenance of location in cell   • regulation of calcium ion transmembrane transport   • monoatomic cation transmembrane transport   • intracellular monoatomic cation homeostasis   • monoatomic ion homeostasis   • positive regulation of calcium ion transmembrane transport   • positive regulation of transmembrane transport   • monoatomic ion transport   • intracellular chemical homeostasis   • positive regulation of release of sequestered calcium ion into cytosol   • regulation of metal ion transport   • regulation of sequestering of calcium ion   • calcium ion transmembrane import into cytosol   • regulation of transport   • sequestering of calcium ion   • cellular homeostasis   • positive regulation of transport   • regulation of monoatomic cation transmembrane transport   • calcium ion transmembrane transport   • defense response   • response to stress   • inflammatory response   • negative regulation of blood vessel morphogenesis   • negative regulation of developmental process   • negative regulation of angiogenesis   • negative regulation of vasculature development   • negative regulation of multicellular organismal process   • positive regulation of DNA-templated transcription   • RNA metabolic process   • positive regulation of macromolecule biosynthetic process   • regulation of primary metabolic process   • nucleobase-containing compound metabolic process   • RNA biosynthetic process   • nucleic acid biosynthetic process   • positive regulation of metabolic process   • DNA-templated transcription   • regulation of RNA metabolic process   • transcription by RNA polymerase II   • positive regulation of biosynthetic process   • positive regulation of macromolecule metabolic process   • regulation of nucleobase-containing compound metabolic process   • regulation of RNA biosynthetic process   • regulation of biosynthetic process   • regulation of transcription by RNA polymerase II   • positive regulation of nucleobase-containing compound metabolic process   • primary metabolic process   • regulation of macromolecule metabolic process   • positive regulation of transcription by RNA polymerase II   • nucleobase-containing compound biosynthetic process   • gene expression   • macromolecule biosynthetic process   • nucleic acid metabolic process   • positive regulation of RNA metabolic process   • regulation of gene expression   • biosynthetic process   • positive regulation of RNA biosynthetic process   • metabolic process   • regulation of macromolecule biosynthetic process   • macromolecule metabolic process   • regulation of DNA-templated transcription   • regulation of metabolic process   • regulation of cell motility   • regulation of leukocyte migration   • leukocyte migration   • regulation of cell migration   • regulation of immune system process   • negative regulation of cell population proliferation   • endothelial cell proliferation   • negative regulation of endothelial cell proliferation   • regulation of endothelial cell proliferation   • regulation of epithelial cell proliferation   • epithelial cell proliferation   • negative regulation of epithelial cell proliferation   • cell surface   • external side of plasma membrane
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeA1L
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodeA1L
Name[2-[[(2S)-1-[bis(phenylmethyl)amino]-5-[[N-(methylcarbamoyl)carbamimidoyl]amino]-1-oxidanylidene-pentan-2-yl]amino]-2-oxidanylidene-ethyl]-diazonio-azanide
Synonyms
Identifier
FormulaC24 H31 N9 O3
Molecular Weight493.561
SMILES
PubChem44129754
Formal Charge0
Total Atoms67
Total Chiral Atoms1
Total Bonds68
Total Aromatic Bonds12

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP49682
Sequence
>8Y0N_nogp_Chain_R
PALYSLLFL LGLLGNGAV AAVLLSRRT ALSSTDTFL LHLAVADTL 
LVLTLPLWA VDAAVQWVF GSGLCKVAG ALFNINFYA GALLLACIS 
FDRYLNIVH ATQLYRRGP PARVTLTCL AVWGLCLLF ALPDFIFLS 
AHHDERLNA THCQYNFPQ VGRTALRVL QLVAGFLLP LLVMAYCYA 
HILAVLLVS RGQRRLRAM RLVVVVVVA FALCWTPYH LVVLVDILM 
DLGALARNC GRESRVDVA KSVTSGLGY MHCCLNPLL YAFVGVKFR 
ERMWMLLLR


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
8K2WAProteinChemokineCXCR3Homo sapiensAMG487--32023-11-2910.1038/s41594-023-01175-5
8HNNAProteinChemokineCXCR3Homo sapiensSCH546738--3.62023-11-2910.1038/s41594-023-01175-5
8K2XAProteinChemokineCXCR3Homo sapiensCXCL10-Gi1/β1/γ23.22023-11-2910.1038/s41594-023-01175-5
8K2X (No Gprot) AProteinChemokineCXCR3Homo sapiensCXCL10-3.22023-11-2910.1038/s41594-023-01175-5
8HNMAProteinChemokineCXCR3Homo sapiensVUF11222-Gi1/β1/γ22.942023-11-2910.1038/s41594-023-01175-5
8HNM (No Gprot) AProteinChemokineCXCR3Homo sapiensVUF11222-2.942023-11-2910.1038/s41594-023-01175-5
8HNLAProteinChemokineCXCR3Homo sapiensPS372424-Gi1/β1/γ22.982023-11-2910.1038/s41594-023-01175-5
8HNL (No Gprot) AProteinChemokineCXCR3Homo sapiensPS372424-2.982023-11-2910.1038/s41594-023-01175-5
8HNKAProteinChemokineCXCR3Homo sapiensCXCL11-Gi1/β1/γ23.012023-11-2910.1038/s41594-023-01175-5
8HNK (No Gprot) AProteinChemokineCXCR3Homo sapiensCXCL11-3.012023-11-2910.1038/s41594-023-01175-5
8Y0HAProteinChemokineCXCR3Homo sapiensVUF11418--3.532025-02-26To be published
8XYIAProteinChemokineCXCR3Homo sapiensVUF10661--3.162025-02-26To be published
8XXYAProteinChemokineCXCR3Homo sapiens---3.682025-02-26To be published
8Y0NAProteinChemokineCXCR3Homo sapiensVUF11418-Go1/β1/γ23.072025-02-26To be published
8Y0N (No Gprot) AProteinChemokineCXCR3Homo sapiensVUF11418-3.072025-02-26To be published
8XYKAProteinChemokineCXCR3Homo sapiensVUF10661-Go1/β1/γ23.032025-02-26To be published
8XYK (No Gprot) AProteinChemokineCXCR3Homo sapiensVUF10661-3.032025-02-26To be published
8XXZAProteinChemokineCXCR3Homo sapiens--Go1/β1/γ23.32025-02-26To be published
8XXZ (No Gprot) AProteinChemokineCXCR3Homo sapiens--3.32025-02-26To be published




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 8Y0N_nogp.zip



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