Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:Y32 6.6405
2R:R:Y36 7.0125407
3R:R:N47 8.075409
4R:R:N65 8.0475429
5R:R:L67 6.4325447
6R:R:D75 10.475409
7R:R:V87 2.515406
8R:R:W96 8.41333639
9R:R:D110 9.3375418
10R:R:V150 6.385447
11R:R:V157 4.985407
12R:R:W158 5.635409
13R:R:L168 6.72567
14R:R:N173 7.4425465
15R:R:F188 8.64407
16R:R:F197 12.676519
17R:R:F201 7.334516
18R:R:Y208 8.02509
19R:R:F338 6.762519
20R:R:W342 8.81167608
21R:R:F345 9.37833618
22R:R:F346 11.604517
23R:R:H349 11.0425418
24R:R:W370 7.142508
25R:R:Y373 9.86518
26R:R:Y383 6.41429759
27R:R:F390 9.73143729
28L:L:?1 10.23091110
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:W370 R:R:Y32 11.01177.72YesYes085
2R:R:V86 R:R:Y36 48.70128.83NoYes087
3R:R:W370 R:R:Y36 30.05867.72YesYes087
4R:R:V86 R:R:Y373 51.06637.57NoYes088
5R:R:D75 R:R:N379 39.645210.77YesNo099
6R:R:N375 R:R:N379 99.201512.26NoNo099
7R:R:N375 R:R:W342 10013.56NoYes098
8R:R:C114 R:R:W342 69.95655.22NoYes078
9R:R:C114 R:R:D110 16.34834.67NoYes178
10R:R:D110 R:R:Y373 15.23659.2YesYes188
11L:L:?1 R:R:C114 53.55775.16YesNo107
12L:L:?1 R:R:Y373 45.032316.76YesYes108
13R:R:F346 R:R:W342 72.45816.01YesYes078
14L:L:?1 R:R:F346 76.768810.29YesYes107
15R:R:D75 R:R:N47 24.929313.46YesYes099
16R:R:G46 R:R:P380 11.52214.06NoNo099
17R:R:N47 R:R:P380 13.467811.4YesNo099
18R:R:F390 R:R:V54 24.98992.62YesNo098
19R:R:V54 R:R:Y66 28.40112.52NoNo085
20R:R:V150 R:R:Y66 33.44962.52YesNo075
21R:R:L67 R:R:V150 44.83028.94YesYes477
22R:R:I154 R:R:L67 77.76945.71NoYes087
23R:R:I154 R:R:S70 79.234910.84NoNo089
24R:R:N120 R:R:S70 83.08578.94NoNo099
25R:R:L71 R:R:N120 98.75185.49NoNo099
26R:R:L71 R:R:N379 83.68212.36NoNo099
27R:R:E57 R:R:L60 10.81977.95NoNo089
28R:R:T64 R:R:Y138 16.30797.49NoNo088
29R:R:D127 R:R:Y138 19.708911.49NoNo098
30R:R:D127 R:R:L67 29.45225.43NoYes097
31R:R:T63 R:R:V150 11.37569.52NoYes067
32R:R:N120 R:R:V157 17.76338.87NoYes097
33R:R:F338 R:R:W342 48.14536.01YesYes098
34R:R:F338 R:R:L121 30.53376.09YesNo098
35R:R:L121 R:R:Y383 29.18447.03NoYes089
36R:R:F197 R:R:F346 29.047925.72YesYes197
37R:R:F197 R:R:F338 24.84845.36YesYes199
38R:R:L77 R:R:M113 10.53169.9NoNo065
39R:R:M112 R:R:M113 12.60877.22NoNo075
40R:R:F162 R:R:M112 16.73246.22NoNo067
41R:R:C166 R:R:F162 22.84219.78NoNo066
42R:R:C166 R:R:P167 24.85855.65NoNo067
43R:R:F188 R:R:P167 32.82294.33YesNo077
44R:R:F188 R:R:S192 36.592913.21YesNo078
45L:L:?1 R:R:S192 38.19996.83YesNo008
46R:R:C103 R:R:W96 16.49995.22NoYes399
47R:R:C103 R:R:R100 20.62365.57NoNo093
48R:R:R100 R:R:T175 28.66899.06NoNo034
49R:R:N173 R:R:T175 34.59675.85YesNo054
50R:R:L168 R:R:N173 38.40215.49YesYes675
51R:R:L168 R:R:V111 41.78294.47YesNo078
52L:L:?1 R:R:V111 43.511212.59YesNo008
53R:R:L119 R:R:V157 10.58224.47NoYes077
54R:R:F338 R:R:T204 45.3817.78YesNo098
55R:R:R128 R:R:Y383 11.92146.17NoYes599
56R:R:S125 R:R:T204 34.81916.4NoNo098
57R:R:S125 R:R:V207 45.25988.08NoNo097
58R:R:S125 R:R:Y208 20.38618.9NoYes099
59R:R:V133 R:R:Y129 33.980216.4NoNo079
60R:R:V207 R:R:Y129 39.64023.79NoNo079
61R:R:H349 R:R:V189 12.123512.45YesNo087
62L:L:?1 R:R:H349 12.16911.7YesYes108
63R:R:V334 R:R:Y383 12.13367.57NoYes089
64R:R:R210 R:R:V214 20.25987.85NoNo067
65R:R:V133 R:R:V214 22.8273.21NoNo777
66R:R:V213 R:R:Y212 11.54231.26NoNo056
67R:R:R210 R:R:V213 17.36411.31NoNo065
68R:R:F386 R:R:I333 12.23975.02NoNo078
69R:R:I333 R:R:I382 17.00022.94NoNo088
70R:R:I382 R:R:Y383 21.76079.67NoYes089
71R:R:V87 R:R:Y36 14.11972.52YesYes067
72L:L:?1 R:R:L89 10.35981.8YesNo005
73R:R:F345 R:R:T368 13.57392.59YesNo086
74R:R:F345 R:R:F346 21.432210.72YesYes187
75R:R:L71 R:R:Y383 28.44154.69NoYes099
76R:R:R128 R:R:Y208 10.142510.29NoYes099
77R:R:V334 R:R:Y208 10.07688.83NoYes089
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
R:R:D110 R:R:V82 5.84 1 Yes No 8 8 1 2
R:R:M83 R:R:Y373 10.78 0 No Yes 8 8 2 1
R:R:V86 R:R:Y373 7.57 0 No Yes 8 8 2 1
R:R:C114 R:R:D110 4.67 1 No Yes 7 8 1 1
R:R:D110 R:R:Y373 9.2 1 Yes Yes 8 8 1 1
L:L:?1 R:R:D110 17.64 1 Yes Yes 0 8 0 1
R:R:L168 R:R:V111 4.47 6 Yes No 7 8 2 1
L:L:?1 R:R:V111 12.59 1 Yes No 0 8 0 1
R:R:C114 R:R:W342 5.22 1 No Yes 7 8 1 2
L:L:?1 R:R:C114 5.16 1 Yes No 0 7 0 1
R:R:S196 R:R:T115 9.59 0 No No 8 8 1 2
R:R:S196 R:R:V164 4.85 0 No No 8 7 1 2
R:R:F188 R:R:L168 13.4 0 Yes Yes 7 7 2 2
R:R:F188 R:R:S192 13.21 0 Yes No 7 8 2 1
R:R:H349 R:R:V189 12.45 1 Yes No 8 7 1 2
L:L:?1 R:R:S192 6.83 1 Yes No 0 8 0 1
R:R:F346 R:R:S193 5.28 1 Yes No 7 8 1 2
R:R:F197 R:R:F346 25.72 1 Yes Yes 9 7 2 1
R:R:F346 R:R:W342 6.01 1 Yes Yes 7 8 1 2
R:R:F345 R:R:F346 10.72 1 Yes Yes 8 7 1 1
R:R:F345 R:R:H349 11.31 1 Yes Yes 8 8 1 1
R:R:F345 R:R:Y365 8.25 1 Yes No 8 4 1 2
R:R:F345 R:R:T369 5.19 1 Yes No 8 6 1 1
L:L:?1 R:R:F345 18.21 1 Yes Yes 0 8 0 1
L:L:?1 R:R:F346 10.29 1 Yes Yes 0 7 0 1
R:R:H349 R:R:Y365 8.71 1 Yes No 8 4 1 2
L:L:?1 R:R:H349 11.7 1 Yes Yes 0 8 0 1
R:R:T369 R:R:Y373 4.99 1 No Yes 6 8 1 1
L:L:?1 R:R:T369 7.66 1 Yes No 0 6 0 1
L:L:?1 R:R:Y373 16.76 1 Yes Yes 0 8 0 1
L:L:?1 R:R:S196 3.9 1 Yes No 0 8 0 1
R:R:G94 R:R:L89 3.42 0 No No 5 5 2 1
R:R:F345 R:R:T368 2.59 1 Yes No 8 6 1 2
L:L:?1 R:R:L89 1.8 1 Yes No 0 5 0 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 8IRT_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 4.32
Number of Linked Nodes 253
Number of Links 278
Number of Hubs 28
Number of Links mediated by Hubs 116
Number of Communities 9
Number of Nodes involved in Communities 44
Number of Links involved in Communities 56
Path Summary
Number Of Nodes in MetaPath 78
Number Of Links MetaPath 77
Number of Shortest Paths 51719
Length Of Smallest Path 3
Average Path Length 13.2889
Length of Longest Path 29
Minimum Path Strength 1.285
Average Path Strength 7.81602
Maximum Path Strength 20.9
Minimum Path Correlation 0.7
Average Path Correlation 0.925351
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 4.34783
Average % Of Corr. Nodes 51.2544
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 36.7179
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function• binding   • tetrapyrrole binding   • heme binding   • electron transfer activity   • cation binding   • transition metal ion binding   • iron ion binding   • ion binding   • metal ion binding   • small molecule binding   • molecular transducer activity   • G protein-coupled receptor activity   • transmembrane signaling receptor activity   • signaling receptor activity   • neurotransmitter receptor activity   • dopamine neurotransmitter receptor activity   • postsynaptic neurotransmitter receptor activity   • dopamine neurotransmitter receptor activity, coupled via Gi/Go   • electron transport chain   • metabolic process   • cellular process   • generation of precursor metabolites and energy   • multicellular organismal process   • regulation of cellular process   • cellular developmental process   • regulation of developmental process   • negative regulation of biological process   • cell development   • regulation of cell differentiation   • regulation of neurogenesis   • regulation of gliogenesis   • regulation of cell development
Gene OntologyBiological Process• electron transport chain   • metabolic process   • cellular process   • generation of precursor metabolites and energy   • multicellular organismal process   • regulation of cellular process   • cellular developmental process   • regulation of developmental process   • negative regulation of biological process   • cell development   • regulation of cell differentiation   • regulation of neurogenesis   • regulation of gliogenesis   • regulation of cell development   • regulation of nervous system development   • multicellular organism development   • neurogenesis   • negative regulation of neurogenesis   • gliogenesis   • cell differentiation   • anatomical structure development   • negative regulation of cellular process   • regulation of multicellular organismal process   • negative regulation of nervous system development   • negative regulation of cell differentiation   • system development   • developmental process   • regulation of biological process   • regulation of multicellular organismal development   • negative regulation of developmental process   • regulation of glial cell differentiation   • biological regulation   • nervous system development   • negative regulation of gliogenesis   • negative regulation of cell development   • negative regulation of oligodendrocyte differentiation   • negative regulation of glial cell differentiation   • central nervous system development   • oligodendrocyte differentiation   • glial cell differentiation   • negative regulation of multicellular organismal process   • regulation of oligodendrocyte differentiation   • response to stimulus   • response to chemical   • response to xenobiotic stimulus   • organic anion transport   • carboxylic acid transport   • secretion   • transport   • arachidonate transport   • lipid localization   • lipid transport   • establishment of localization   • organic acid transport   • localization   • arachidonate secretion   • monocarboxylic acid transport   • fatty acid transport   • icosanoid transport   • macromolecule localization   • icosanoid secretion   • long-chain fatty acid transport   • negative regulation of protein transport   • regulation of localization   • establishment of protein localization   • nitrogen compound transport   • regulation of protein localization   • negative regulation of transport   • protein localization to extracellular region   • regulation of secretion by cell   • secretion by cell   • negative regulation of secretion   • negative regulation of secretion by cell   • intracellular protein localization   • negative regulation of protein localization   • regulation of transport   • regulation of establishment of protein localization   • establishment of protein localization to extracellular region   • negative regulation of establishment of protein localization   • export from cell   • regulation of protein transport   • protein secretion   • regulation of protein secretion   • regulation of secretion   • negative regulation of protein secretion   • protein transport   • behavior   • locomotory behavior   • regulation of cytokinesis   • positive regulation of cell division   • regulation of cell cycle process   • positive regulation of biological process   • cytokinesis   • positive regulation of cell cycle   • regulation of cell division   • positive regulation of cytokinesis   • positive regulation of cell cycle process   • cell division   • cell cycle   • regulation of cell cycle   • positive regulation of cellular process   • cell cycle process   • adult behavior   • behavioral response to cocaine   • response to oxygen-containing compound   • response to nitrogen compound   • response to cocaine   • response to alkaloid   • system process   • learning   • learning or memory   • nervous system process   • cognition   • monoamine transport   • regulation of catecholamine secretion   • signaling   • organic hydroxy compound transport   • dopamine transport   • cell communication   • catecholamine transport   • signal release   • cell-cell signaling   • dopamine secretion   • catecholamine secretion   • amine transport   • regulation of amine transport   • regulation of dopamine secretion   • import into cell   • regulation of catecholamine uptake involved in synaptic transmission   • cellular localization   • catecholamine uptake   • dopamine uptake involved in synaptic transmission   • synaptic signaling   • establishment of localization in cell   • regulation of dopamine uptake involved in synaptic transmission   • neurotransmitter reuptake   • regulation of neurotransmitter uptake   • trans-synaptic signaling   • catecholamine uptake involved in synaptic transmission   • regulation of neurotransmitter transport   • neurotransmitter transport   • chemical synaptic transmission   • anterograde trans-synaptic signaling   • neurotransmitter uptake   • synaptic transmission, dopaminergic   • dopamine uptake   • inorganic ion homeostasis   • intracellular calcium ion homeostasis   • homeostatic process   • calcium ion homeostasis   • cellular homeostasis   • chemical homeostasis   • intracellular monoatomic cation homeostasis   • monoatomic ion homeostasis   • intracellular chemical homeostasis   • monoatomic cation homeostasis   • intracellular monoatomic ion homeostasis   • adenylate cyclase-inhibiting dopamine receptor signaling pathway   • cellular response to stimulus   • cellular response to nitrogen compound   • response to dopamine   • cellular response to dopamine   • response to monoamine   • response to catecholamine   • cellular response to catecholamine stimulus   • signal transduction   • G protein-coupled dopamine receptor signaling pathway   • cellular response to oxygen-containing compound   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • cellular response to chemical stimulus   • cellular response to monoamine stimulus   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • response to light stimulus   • visual learning   • visual behavior   • associative learning   • response to radiation   • response to abiotic stimulus   • positive regulation of organelle organization   • regulation of cellular component organization   • positive regulation of cellular component organization   • regulation of mitotic nuclear division   • positive regulation of mitotic nuclear division   • mitotic cell cycle   • cellular component organization   • regulation of mitotic cell cycle   • cellular component organization or biogenesis   • mitotic nuclear division   • organelle fission   • positive regulation of nuclear division   • regulation of organelle organization   • organelle organization   • nuclear division   • mitotic cell cycle process   • regulation of nuclear division   • regulation of biosynthetic process   • rhythmic process   • circadian regulation of gene expression   • circadian rhythm   • regulation of macromolecule metabolic process   • gene expression   • macromolecule biosynthetic process   • regulation of gene expression   • biosynthetic process   • regulation of macromolecule biosynthetic process   • macromolecule metabolic process   • regulation of metabolic process   • response to histamine   • amine metabolic process   • catecholamine metabolic process   • phenol-containing compound metabolic process   • dopamine metabolic process   • catechol-containing compound metabolic process   • biogenic amine metabolic process   • startle response   • regulation of response to external stimulus   • neuromuscular process   • negative regulation of response to stimulus   • prepulse inhibition   • response to external stimulus   • regulation of response to stimulus   • negative regulation of response to external stimulus   • regulation of potassium ion transport   • regulation of monoatomic ion transport   • metal ion transport   • monoatomic ion transport   • potassium ion transport   • monoatomic cation transport   • regulation of metal ion transport   • regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction   • negative regulation of signaling   • negative regulation of intracellular signal transduction   • negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction   • regulation of signal transduction   • intracellular signal transduction   • negative regulation of cell communication   • regulation of intracellular signal transduction   • intracellular signaling cassette   • regulation of signaling   • negative regulation of signal transduction   • regulation of cell communication   • phosphatidylinositol 3-kinase/protein kinase B signal transduction   • multicellular organismal movement   • musculoskeletal movement   • reflex   • musculoskeletal movement, spinal reflex action   • modulation of chemical synaptic transmission   • synaptic transmission, glutamatergic   • regulation of synaptic transmission, glutamatergic   • negative regulation of synaptic transmission   • regulation of trans-synaptic signaling   • negative regulation of synaptic transmission, glutamatergic   • response to morphine   • response to isoquinoline alkaloid   • regulation of biological quality   • negative regulation of cytosolic calcium ion concentration   • biological process involved in intraspecies interaction between organisms   • social behavior   • positive regulation of cell communication   • positive regulation of signal transduction   • regulation of dopamine receptor signaling pathway   • positive regulation of response to stimulus   • regulation of G protein-coupled receptor signaling pathway   • positive regulation of G protein-coupled receptor signaling pathway   • positive regulation of dopamine receptor signaling pathway   • positive regulation of signaling   • acid secretion   • adenylate cyclase-activating dopamine receptor signaling pathway   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • negative adaptation of signaling pathway   • receptor internalization   • desensitization of G protein-coupled receptor signaling pathway   • negative regulation of G protein-coupled receptor signaling pathway   • vesicle-mediated transport   • G protein-coupled receptor internalization   • adaptation of signaling pathway   • receptor-mediated endocytosis   • endocytosis   • circulatory system process   • regulation of blood pressure   • negative regulation of blood pressure   • blood circulation   • phospholipase C-activating dopamine receptor signaling pathway   • phospholipase C-activating G protein-coupled receptor signaling pathway   • cellular anatomical structure   • periplasmic space   • cell periphery   • plasma membrane   • membrane   • synapse   • cell junction   • protein binding   • binding   • G-protein beta-subunit binding   • fibroblast proliferation   • cell population proliferation   • response to ketone   • response to prostaglandin   • response to lipid   • response to endogenous stimulus   • response to alcohol   • cellular response to prostaglandin stimulus   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to alcohol   • response to hormone   • cellular response to lipid   • response to prostaglandin E   • cellular response to ketone   • cellular response to hormone stimulus   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cytoplasmic side of plasma membrane   • GTPase complex   • extrinsic component of membrane   • extrinsic component of cytoplasmic side of plasma membrane   • extracellular exosome   • membrane-bounded organelle   • extracellular vesicle   • extracellular organelle   • extracellular region   • organelle   • extracellular space   • vesicle   • extracellular membrane-bounded organelle   • enzyme binding   • GTPase binding   • protein-containing complex binding   • pyrophosphatase activity   • GTPase activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • signaling receptor complex adaptor activity   • protein-macromolecule adaptor activity   • molecular adaptor activity   • signaling adaptor activity   • sensory perception of chemical stimulus   • sensory perception   • sensory perception of taste   • sensory organ development   • eye development   • animal organ development   • retina development in camera-type eye   • visual system development   • camera-type eye development   • sensory system development   • small GTPase-mediated signal transduction   • Ras protein signal transduction   • cellular response to acetylcholine   • acetylcholine receptor signaling pathway   • postsynaptic signal transduction   • G protein-coupled acetylcholine receptor signaling pathway   • response to acetylcholine   • non-motile cilium   • 9+0 non-motile cilium   • cilium   • neuron projection   • photoreceptor disc membrane   • photoreceptor outer segment   • plasma membrane bounded cell projection   • cell projection   • photoreceptor cell cilium   • organelle membrane   • intracellular anatomical structure   • cytoplasm   • cytosol   • vacuolar membrane   • lytic vacuole   • vacuole   • intracellular membrane-bounded organelle   • intracellular organelle   • lytic vacuole membrane   • bounding membrane of organelle   • lysosomal membrane   • lysosome   • D2 dopamine receptor binding   • signaling receptor binding   • G protein-coupled receptor binding   • dopamine receptor binding   • enzyme regulator activity   • adenylate cyclase inhibitor activity   • cyclase regulator activity   • molecular function inhibitor activity   • cyclase inhibitor activity   • molecular function regulator activity   • enzyme inhibitor activity   • adenylate cyclase regulator activity   • guanyl nucleotide binding   • GTP binding   • nucleotide binding   • guanyl ribonucleotide binding   • purine ribonucleotide binding   • purine ribonucleoside triphosphate binding   • nucleoside phosphate binding   • ion binding   • purine nucleotide binding   • anion binding   • heterocyclic compound binding   • carbohydrate derivative binding   • ribonucleotide binding   • small molecule binding   • cation binding   • magnesium ion binding   • metal ion binding   • GDP binding   • G protein-coupled serotonin receptor binding   • G-protein beta/gamma-subunit complex binding   • G protein activity   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • response to peptide hormone   • leukocyte migration   • immune system process   • mononuclear cell migration   • lymphocyte migration   • cell migration   • T cell migration   • cell motility   • regulation of steroid biosynthetic process   • regulation of cholesterol biosynthetic process   • regulation of cholesterol metabolic process   • steroid metabolic process   • regulation of lipid metabolic process   • sterol metabolic process   • cholesterol metabolic process   • lipid biosynthetic process   • alcohol metabolic process   • regulation of primary metabolic process   • positive regulation of metabolic process   • regulation of small molecule metabolic process   • positive regulation of biosynthetic process   • positive regulation of lipid metabolic process   • small molecule metabolic process   • steroid biosynthetic process   • secondary alcohol biosynthetic process   • regulation of alcohol biosynthetic process   • small molecule biosynthetic process   • regulation of steroid metabolic process   • cholesterol biosynthetic process   • positive regulation of cholesterol biosynthetic process   • primary metabolic process   • secondary alcohol metabolic process   • positive regulation of steroid biosynthetic process   • sterol biosynthetic process   • positive regulation of lipid biosynthetic process   • regulation of sterol biosynthetic process   • alcohol biosynthetic process   • positive regulation of cholesterol metabolic process   • positive regulation of steroid metabolic process   • regulation of lipid biosynthetic process   • positive regulation of small molecule metabolic process   • positive regulation of alcohol biosynthetic process   • positive regulation of sterol biosynthetic process   • lipid metabolic process   • negative regulation of hormone secretion   • regulation of peptide hormone secretion   • negative regulation of peptide hormone secretion   • regulation of hormone levels   • regulation of hormone secretion   • regulation of peptide secretion   • hormone secretion   • negative regulation of peptide secretion   • peptide secretion   • amide transport   • regulation of peptide transport   • peptide transport   • negative regulation of insulin secretion   • regulation of insulin secretion   • peptide hormone secretion   • hormone transport   • insulin secretion   • regulation of cytoskeleton organization   • microtubule cytoskeleton organization   • regulation of mitotic spindle organization   • microtubule cytoskeleton organization involved in mitosis   • spindle organization   • regulation of microtubule-based process   • regulation of spindle organization   • mitotic spindle organization   • microtubule-based process   • cytoskeleton organization   • regulation of microtubule cytoskeleton organization   • positive regulation of protein localization to cell periphery   • protein localization to cell periphery   • positive regulation of protein localization to cell cortex   • regulation of protein localization to cell periphery   • regulation of protein localization to cell cortex   • positive regulation of protein localization   • protein localization to cell cortex   • cellular response to forskolin   • response to forskolin   • midbody   • nucleus   • membrane-enclosed lumen   • intracellular membraneless organelle   • nucleolus   • intracellular organelle lumen   • organelle lumen   • membraneless organelle   • nuclear lumen   • cell cortex   • centrosome   • microtubule organizing center   • cytoskeleton   • microtubule cytoskeleton   • centriolar satellite   • nucleoplasm   • Golgi apparatus   • endomembrane system   • ciliary basal body
Gene OntologyCellular Component
SCOP2Domain Identifier• G protein-coupled receptor-like   • Transducin (heterotrimeric G protein), gamma chain   • Ras-like P-loop GTPases
SCOP2Family Identifier• G protein-coupled receptor-like   • Transducin (heterotrimeric G protein), gamma chain   • Ras-like P-loop GTPases
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeR5F
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodeR5F
NameRotigotine
Synonyms(6~{S})-6-[propyl(2-thiophen-2-ylethyl)amino]-5,6,7,8-tetrahydronaphthalen-1-ol
Identifier
FormulaC19 H25 N O S
Molecular Weight315.473
SMILES
PubChem59227
Formal Charge0
Total Atoms47
Total Chiral Atoms1
Total Bonds49
Total Aromatic Bonds11

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP35462
Sequence
>8IRT_nogp_Chain_R
YYALSYCAL ILAIVFGNG LVCMAVLKE RALQTTTNY LVVSLAVAD 
LLVATLVMP WVVYLEVTG GVWNFSRIC CDVFVTLDV MMCTASILN 
LCAISIDRY TAVVMPVHY QHGTGQSSC RRVALMITA VWVLAFAVS 
CPLLFGFNT TGDPTVCSI SNPDFVIYS SVVSFYLPF GVTVLVYAR 
IYVVLKQRR RKRIPLREK KATQMVAIV LGAFIVCWL PFFLTHVLN 
THCQTCHVS PELYSATTW LGYVNSALN PVIYTTFNI EFRKAFLKI 
LSC


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
7LD3ANucleotideAdenosineA1Homo sapiensAdenosineMIPS521Gi2/β1/γ23.22021-09-08doi.org/10.1038/s41586-021-03897-2
7LD3 (No Gprot) ANucleotideAdenosineA1Homo sapiensAdenosineMIPS5213.22021-09-08doi.org/10.1038/s41586-021-03897-2
8U4PAProteinChemokineCXCR4Homo sapiensAMD3100-Gi1/β1/γ23.152024-03-13doi.org/10.1101/2024.02.09.579708
8U4P (No Gprot) AProteinChemokineCXCR4Homo sapiensAMD3100-3.152024-03-13doi.org/10.1101/2024.02.09.579708
8ZPNAProteinChemokineCXCR4Homo sapiensAMD3100--3.312025-02-26doi.org/10.1073/pnas.2425795122
7CMUAAmineDopamineD3Homo sapiensPramipexole-Gi1/β1/γ232021-03-10doi.org/10.1016/j.molcel.2021.01.003
7CMU (No Gprot) AAmineDopamineD3Homo sapiensPramipexole-32021-03-10doi.org/10.1016/j.molcel.2021.01.003
7CMVAAmineDopamineD3Homo sapiensPD128907-Gi1/β1/γ22.72021-03-10doi.org/10.1016/j.molcel.2021.01.003
7CMV (No Gprot) AAmineDopamineD3Homo sapiensPD128907-2.72021-03-10doi.org/10.1016/j.molcel.2021.01.003
8IRTAAmineDopamineD3Homo sapiensRotigotine-Gi1/β1/γ22.72023-06-07doi.org/10.1038/s41422-023-00808-0
8IRT (No Gprot) AAmineDopamineD3Homo sapiensRotigotine-2.72023-06-07doi.org/10.1038/s41422-023-00808-0
9F33AAmineDopamineD3Homo sapiensFOB02-04A-Go/β1/γ23.052024-09-18doi.org/10.1038/s41467-024-51993-4
9F33 (No Gprot) AAmineDopamineD3Homo sapiensFOB02-04A-3.052024-09-18doi.org/10.1038/s41467-024-51993-4
9F34AAmineDopamineD3Homo sapiensFOB02-04A-Go/β1/γ23.052024-09-18doi.org/10.1038/s41467-024-51993-4
9F34 (No Gprot) AAmineDopamineD3Homo sapiensFOB02-04A-3.052024-09-18doi.org/10.1038/s41467-024-51993-4
3PBLAAmineDopamineD3Homo sapiensEticlopride--2.892010-11-03doi.org/10.1126/science.1197410
8ID3ALipidFree Fatty AcidFFA4Homo sapiens9-Hydroxystearic acid-Gi1/β1/γ23.12023-03-15doi.org/10.1126/science.add6220
8ID3 (No Gprot) ALipidFree Fatty AcidFFA4Homo sapiens9-Hydroxystearic acid-3.12023-03-15doi.org/10.1126/science.add6220
6D32FProteinFrizzledSMOXenopus laevisCyclopamineCyclopamine-3.752018-05-23doi.org/10.1016/j.cell.2018.04.029
6D35FProteinFrizzledSMOXenopus laevis-Cholesterol-3.92018-05-23doi.org/10.1016/j.cell.2018.04.029
7D3SB1PeptideGlucagonSecretinHomo sapiensSecretin-Gs/β1/γ22.92020-11-04doi.org/10.1016/j.bbrc.2020.08.042
7D3S (No Gprot) B1PeptideGlucagonSecretinHomo sapiensSecretin-2.92020-11-04doi.org/10.1016/j.bbrc.2020.08.042
7TD3ALipidLysophospholipidS1P1Homo sapiensS1P-Gi1/β1/γ232022-02-09doi.org/10.1038/s41467-022-28417-2
7TD3 (No Gprot) ALipidLysophospholipidS1P1Homo sapiensS1P-32022-02-09doi.org/10.1038/s41467-022-28417-2
8JD3CAminoacidMetabotropic GlutamatemGlu2; mGlu3Homo sapiensGlutamateJNJ-40411813Gi1/β1/γ23.32023-06-21doi.org/10.1038/s41422-023-00830-2
8JD3 (No Gprot) CAminoacidMetabotropic GlutamatemGlu2; mGlu3Homo sapiensGlutamateJNJ-404118133.32023-06-21doi.org/10.1038/s41422-023-00830-2
7AD3D1Ste2-likeSTE2STE2Saccharomyces cerevisiaeα-factor mating pheromone-Gi1/STE4/γ23.32020-12-09doi.org/10.1038/s41586-020-2994-1
7AD3 (No Gprot) D1Ste2-likeSTE2STE2Saccharomyces cerevisiaeα-factor mating pheromone-3.32020-12-09doi.org/10.1038/s41586-020-2994-1




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 8IRT_nogp.zip



You can click to copy the link of this page to easily come back here later

or use this QR code to link and share this page.



You can also  read or  download a guide explaining the meaning of all files and numerical data.