Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:?1 8.973851310
2R:R:Y36 5.966517
3R:R:N47 5.548509
4R:R:E57 7.225408
5R:R:L60 8.13529
6R:R:D75 5.08519
7R:R:M83 5.77418
8R:R:Y88 6.3175406
9R:R:W96 6.416539
10R:R:C103 6.32439
11R:R:W119 11.4375457
12R:R:S125 6.0425469
13R:R:Y129 6.7225409
14R:R:Y138 6.668548
15R:R:S146 4.2725408
16R:R:R149 6.505407
17R:R:N185 5.4025476
18R:R:F188 7.67577
19R:R:S196 4.0375418
20R:R:F197 9.588519
21R:R:Y198 4.685406
22R:R:F201 6.24506
23R:R:Y208 7.43409
24R:R:K326 5.915488
25R:R:M330 6.7375488
26R:R:F338 7.27419
27R:R:W342 7.66857718
28R:R:F345 12.045418
29R:R:F346 10.298517
30R:R:W370 9.7418
31R:R:Y373 5.92518
32R:R:N379 6.12519
33R:R:I382 4.59408
34R:R:Y383 6.095619
35R:R:T384 5.94428
36R:R:F390 9.59529
37R:R:F394 6.265429
38R:R:I397 3.76507
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:?1 R:R:T369 11.34475.43YesNo006
2R:R:W370 R:R:Y36 15.622612.54YesYes187
3L:L:?1 R:R:Y373 22.71154.32YesYes108
4L:L:?1 R:R:C114 67.46418.19YesNo007
5R:R:C114 R:R:W342 68.07165.22NoYes078
6R:R:N375 R:R:W342 10010.17NoYes098
7R:R:N375 R:R:N379 99.35788.17NoYes099
8R:R:D75 R:R:N379 41.94474.04YesYes199
9R:R:D75 R:R:N47 40.32364.04YesYes099
10L:L:?1 R:R:F346 72.43458.98YesYes107
11R:R:F346 R:R:W342 85.30914.01YesYes178
12R:R:A72 R:R:N47 33.69114.69NoYes099
13R:R:A72 R:R:V50 31.73953.39NoNo099
14R:R:T384 R:R:V50 29.73126.35YesNo089
15R:R:F394 R:R:T384 10.65545.19YesYes298
16R:R:F390 R:R:T384 16.13269.08YesYes298
17R:R:F338 R:R:W342 61.35737.02YesYes198
18R:R:F338 R:R:L121 68.32034.87YesNo198
19R:R:L121 R:R:Y383 66.39397.03NoYes189
20R:R:I124 R:R:Y383 58.85812.09NoYes199
21R:R:I124 R:R:L67 60.07624.28NoNo097
22R:R:D127 R:R:L67 58.50235.43NoNo097
23R:R:D127 R:R:Y138 55.253710.34NoYes498
24R:R:G141 R:R:Y138 20.30665.79NoYes048
25R:R:G141 R:R:S146 18.65083.71NoYes048
26R:R:S146 R:R:T63 20.53647.99YesNo086
27R:R:T63 R:R:V150 13.72144.76NoNo067
28R:R:V150 R:R:Y66 10.29971.26NoNo075
29R:R:N379 R:R:Y383 78.03774.65YesYes199
30R:R:R149 R:R:Y138 31.91584.12YesYes078
31R:R:R149 R:R:S146 18.88383.95YesYes078
32R:R:L71 R:R:N379 14.82316.87NoYes199
33R:R:L71 R:R:N120 15.77375.49NoNo099
34L:L:?1 R:R:S192 39.87984.43YesNo008
35R:R:F188 R:R:S192 38.176810.57YesNo078
36R:R:F188 R:R:P167 21.60354.33YesNo077
37R:R:C166 R:R:P167 19.67073.77NoNo067
38R:R:C166 R:R:F162 17.73178.38NoNo066
39R:R:F162 R:R:M112 15.78633.73NoNo067
40R:R:M112 R:R:M113 13.83474.33NoNo075
41R:R:L77 R:R:M113 11.87675.65NoNo065
42L:L:?1 R:R:F106 51.18993.59YesNo007
43R:R:F106 R:R:W85 49.600214.03NoNo077
44R:R:C102 R:R:W85 47.75565.22NoNo047
45R:R:C102 R:R:F98 17.30365.59NoNo346
46R:R:F98 R:R:Y88 15.78329.28NoYes066
47R:R:C102 R:R:W96 28.60437.84NoYes349
48R:R:C103 R:R:W96 23.24986.53YesYes399
49R:R:C103 R:R:R100 11.87678.36YesNo093
50R:R:R128 R:R:Y383 35.53584.12NoYes199
51R:R:R128 R:R:Y208 36.75088.23NoYes099
52R:R:S125 R:R:Y208 65.25435.09YesYes099
53R:R:V334 R:R:Y383 36.05835.05NoYes089
54R:R:V334 R:R:Y208 34.41836.31NoYes089
55R:R:S125 R:R:V207 55.39854.85YesNo697
56R:R:V207 R:R:Y129 52.1723.79NoYes079
57R:R:V133 R:R:Y129 12.68578.83NoYes079
58R:R:R210 R:R:Y129 33.1348.23NoYes069
59R:R:R149 R:R:T130 10.416114.23YesNo075
60R:R:Q139 R:R:S146 13.72141.44NoYes068
61R:R:H140 R:R:Q139 10.29976.18NoNo056
62R:R:R210 R:R:V213 26.48582.62NoNo065
63R:R:Q217 R:R:V213 23.14912.87NoNo055
64R:R:Q217 R:R:R220 19.80612.34NoNo056
65R:R:K216 R:R:R220 16.45684.95NoNo066
66R:R:K216 R:R:Y212 13.10125.97NoNo066
67R:R:I382 R:R:Y383 18.09373.63YesYes089
68R:R:I333 R:R:I382 12.70788.83NoYes088
69R:R:I333 R:R:M330 11.02372.92NoYes088
70R:R:F345 R:R:T368 14.74445.19YesNo086
71R:R:T348 R:R:T368 13.62696.28NoNo066
72R:R:L364 R:R:T348 12.54.42NoNo056
73R:R:F345 R:R:F346 17.892212.86YesYes187
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:?1 R:R:H29 3.79 1 Yes No 0 4 0 1
L:L:?1 R:R:E90 3.91 1 Yes No 0 6 0 1
L:L:?1 R:R:G94 10.08 1 Yes No 0 5 0 1
L:L:?1 R:R:F106 3.59 1 Yes No 0 7 0 1
L:L:?1 R:R:D110 23.01 1 Yes No 0 8 0 1
L:L:?1 R:R:V111 14.27 1 Yes No 0 8 0 1
L:L:?1 R:R:C114 8.19 1 Yes No 0 7 0 1
L:L:?1 R:R:S192 4.43 1 Yes No 0 8 0 1
L:L:?1 R:R:F345 23.34 1 Yes Yes 0 8 0 1
L:L:?1 R:R:F346 8.98 1 Yes Yes 0 7 0 1
L:L:?1 R:R:T369 5.43 1 Yes No 0 6 0 1
L:L:?1 R:R:Y373 4.32 1 Yes Yes 0 8 0 1
R:R:E90 R:R:H29 9.85 1 No No 6 4 1 1
R:R:E90 R:R:Y32 6.73 1 No No 6 5 1 2
R:R:M83 R:R:Y36 4.79 1 Yes Yes 8 7 2 2
R:R:V86 R:R:Y36 3.79 1 No Yes 8 7 2 2
R:R:T369 R:R:Y36 3.75 0 No Yes 6 7 1 2
R:R:Y36 R:R:Y373 4.96 1 Yes Yes 7 8 2 1
R:R:D110 R:R:V82 5.84 1 No No 8 8 1 2
R:R:M83 R:R:Y373 10.78 1 Yes Yes 8 8 2 1
R:R:F106 R:R:W85 14.03 0 No No 7 7 1 2
R:R:V86 R:R:Y373 3.79 1 No Yes 8 8 2 1
R:R:D110 R:R:Y373 5.75 1 No Yes 8 8 1 1
R:R:S165 R:R:V111 6.46 0 No No 8 8 2 1
R:R:C114 R:R:W342 5.22 0 No Yes 7 8 1 2
R:R:S196 R:R:T115 9.59 1 Yes No 8 8 1 2
R:R:F188 R:R:S192 10.57 7 Yes No 7 8 2 1
R:R:F346 R:R:S193 5.28 1 Yes No 7 8 1 2
R:R:F197 R:R:W342 4.01 1 Yes Yes 9 8 2 2
R:R:F197 R:R:F346 20.36 1 Yes Yes 9 7 2 1
R:R:F346 R:R:W342 4.01 1 Yes Yes 7 8 1 2
R:R:F345 R:R:F346 12.86 1 Yes Yes 8 7 1 1
R:R:F345 R:R:H349 6.79 1 Yes No 8 8 1 2
R:R:F345 R:R:T368 5.19 1 Yes No 8 6 1 2
L:L:?1 R:R:S196 3.32 1 Yes Yes 0 8 0 1
R:R:V164 R:R:V195 3.21 1 No No 7 4 2 2
R:R:G93 R:R:G94 2.11 0 No No 4 5 2 1
R:R:S196 R:R:V164 1.62 1 Yes No 8 7 1 2
R:R:S196 R:R:V195 1.62 1 Yes No 8 4 1 2

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 9F33_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3.59
Number of Linked Nodes 253
Number of Links 278
Number of Hubs 38
Number of Links mediated by Hubs 149
Number of Communities 8
Number of Nodes involved in Communities 52
Number of Links involved in Communities 65
Path Summary
Number Of Nodes in MetaPath 74
Number Of Links MetaPath 73
Number of Shortest Paths 71875
Length Of Smallest Path 3
Average Path Length 14.6072
Length of Longest Path 32
Minimum Path Strength 1.195
Average Path Strength 6.41057
Maximum Path Strength 18.425
Minimum Path Correlation 0.7
Average Path Correlation 0.920779
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 3.57143
Average % Of Corr. Nodes 40.0257
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 46.8996
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain   • G protein-coupled receptor-like
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain   • G protein-coupled receptor-like
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeA1H
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodeA1H
NameMolidustat
Synonyms
  • Molidustat sodium
  • Molidustat
Identifier
FormulaC13 H14 N8 O2
Molecular Weight314.303
SMILES
PubChem59603622
Formal Charge0
Total Atoms37
Total Chiral Atoms0
Total Bonds40
Total Aromatic Bonds11

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP35462
Sequence
>9F33_nogp_Chain_R
HAYYALSYC ALILAIVFG NGLVCMAVL KERALQTTT NYLVVSLAV 
ADLLVATLV MPWVVYLEV TGGVWNFSR ICCDVFVTL DVMMCTASI 
NLCAISIDR YTAVVMPVH YQHGTGQSS CRRVALMIT AVWVLAFAV 
SCPLLFGFN TTGDPTVCS ISNPDFVIY SSVVSFYLP FGVTVLVYA 
RIYVVLKQR RRKRIREKK ATQMVAIVL GAFIVCWLP FFLTHVLNT 
HCQTCHVSP ELYSATTWL GYVNSALNP VIYTTFNIE FRKAFLKIL 
SCW


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
9F34AAmineDopamineD3Homo sapiensFOB02-04A-Go1/β1/γ23.052024-09-1810.1038/s41467-024-51993-4
9F34 (No Gprot) AAmineDopamineD3Homo sapiensFOB02-04A-3.052024-09-1810.1038/s41467-024-51993-4
9F33AAmineDopamineD3Homo sapiensFOB02-04A-Go1/β1/γ23.052024-09-1810.1038/s41467-024-51993-4
9F33 (No Gprot) AAmineDopamineD3Homo sapiensFOB02-04A-3.052024-09-1810.1038/s41467-024-51993-4
8U4PAProteinChemokineCXCR4Homo sapiensAMD3100CholesterolGi1/β1/γ23.152024-03-1310.1101/2024.02.09.579708
8U4P (No Gprot) AProteinChemokineCXCR4Homo sapiensAMD3100Cholesterol3.152024-03-1310.1101/2024.02.09.579708
8JD3CAminoacidMetabotropic GlutamatemGlu2; mGlu3Homo sapiensGlutamateHZR; PEFGi1/β1/γ23.32023-06-2110.1038/s41422-023-00830-2
8JD3 (No Gprot) CAminoacidMetabotropic GlutamatemGlu2; mGlu3Homo sapiensGlutamateHZR; PEF3.32023-06-2110.1038/s41422-023-00830-2
8IRTAAmineDopamineD3Homo sapiensRotigotine-Gi1/β1/γ22.72023-06-0710.1038/s41422-023-00808-0
8IRT (No Gprot) AAmineDopamineD3Homo sapiensRotigotine-2.72023-06-0710.1038/s41422-023-00808-0
8ID3ALipidFree Fatty AcidFFA4Homo sapiens9-Hydroxystearic acid-Gi1/β1/γ23.12023-03-1510.1126/science.add6220
8ID3 (No Gprot) ALipidFree Fatty AcidFFA4Homo sapiens9-Hydroxystearic acid-3.12023-03-1510.1126/science.add6220
8ZPNAProteinChemokineCXCR4Homo sapiensAMD3100Cholesterol-3.312025-02-26To be published
7TD3ALipidLysophospholipidS1P1Homo sapiensS1P-Gi1/β1/γ232022-02-0910.1038/s41467-022-28417-2
7TD3 (No Gprot) ALipidLysophospholipidS1P1Homo sapiensS1P-32022-02-0910.1038/s41467-022-28417-2
7LD3ANucleotideAdenosineA1Homo sapiensAdenosinePubChem 25263603Gi2/β1/γ23.22021-09-0810.1038/s41586-021-03897-2
7LD3 (No Gprot) ANucleotideAdenosineA1Homo sapiensAdenosinePubChem 252636033.22021-09-0810.1038/s41586-021-03897-2
7CMVAAmineDopamineD3Homo sapiensPD128907-Gi1/β1/γ22.72021-03-1010.1016/j.molcel.2021.01.003
7CMV (No Gprot) AAmineDopamineD3Homo sapiensPD128907-2.72021-03-1010.1016/j.molcel.2021.01.003
7CMUAAmineDopamineD3Homo sapiensPramipexole-Gi1/β1/γ232021-03-1010.1016/j.molcel.2021.01.003
7CMU (No Gprot) AAmineDopamineD3Homo sapiensPramipexole-32021-03-1010.1016/j.molcel.2021.01.003
7AD3D1Ste2-likeSTE2STE2Saccharomyces cerevisiaeα-factor mating pheromone-Gi1/STE4/γ23.32020-12-0910.1038/s41586-020-2994-1
7AD3 (No Gprot) D1Ste2-likeSTE2STE2Saccharomyces cerevisiaeα-factor mating pheromone-3.32020-12-0910.1038/s41586-020-2994-1
7D3SB1PeptideGlucagonSecretinHomo sapiensSecretin-Gs/β1/γ22.92020-11-0410.1016/j.bbrc.2020.08.042
7D3S (No Gprot) B1PeptideGlucagonSecretinHomo sapiensSecretin-2.92020-11-0410.1016/j.bbrc.2020.08.042
6D35FProteinFrizzledSMOXenopus laevis-Cholesterol-3.92018-05-2310.1016/j.cell.2018.04.029
6D32FProteinFrizzledSMOXenopus laevisCyclopamineCyclopamine-3.752018-05-2310.1016/j.cell.2018.04.029
3PBLAAmineDopamineD3Homo sapiensEticlopride--2.892010-11-0310.1126/science.1197410




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Download 9F33_nogp.zip



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