Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:?1 7.769231310
2R:R:H28 6.4375418
3R:R:Y29 8.36667617
4R:R:K34 5.448516
5R:R:L35 4.5475436
6R:R:F52 6.4625406
7R:R:I70 3.3925407
8R:R:F76 12.4275408
9R:R:Y81 8.92333649
10R:R:F83 6.6325408
11R:R:L87 6.095629
12R:R:A88 2.905409
13R:R:D91 7.5475429
14R:R:Y98 8.19333616
15R:R:N101 5.966515
16R:R:Y110 2.8375405
17R:R:T113 6.045407
18R:R:W117 7.88819
19R:R:F118 6.246516
20R:R:R120 6.02333616
21R:R:E121 7.33714715
22R:R:M124 5.3275416
23R:R:F125 8.582515
24R:R:F133 6.5875405
25R:R:L135 5.545429
26R:R:Y143 4.025408
27R:R:W168 3.788569
28R:R:W182 6.4125405
29R:R:N183 6.385405
30R:R:V194 3.74414
31R:R:L195 5.23667613
32R:R:Y198 7.16143714
33R:R:Y202 9.2517
34R:R:T207 3.165405
35R:R:F210 6.4025427
36R:R:Y221 5.1175409
37R:R:Y225 7.2225406
38R:R:F265 5.002529
39R:R:W269 7.94167628
40R:R:F273 6.355406
41R:R:D279 6.7575414
42R:R:C287 4.6475413
43R:R:L290 4.99613
44R:R:N303 7.3875429
45R:R:N307 7.4975429
46R:R:I310 3.555428
47R:R:Y311 4.562529
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:?1 R:R:Y29 21.03927.99YesYes107
2L:L:?1 R:R:R120 21.25298.28YesYes106
3R:R:W117 R:R:Y29 16.46086.75YesYes197
4R:R:R120 R:R:W117 18.44556YesYes169
5L:L:?1 R:R:E121 28.58619.04YesYes105
6R:R:E121 R:R:W117 16.741816.36YesYes159
7L:L:?1 R:R:M124 44.29744.28YesYes106
8L:L:?1 R:R:F125 25.269317.53YesYes105
9L:L:?1 R:R:L128 1005.24YesNo006
10L:L:?1 R:R:S129 24.47896.83YesNo006
11L:L:?1 R:R:L195 43.02114.19YesYes103
12R:R:L195 R:R:W117 16.38173.42YesYes139
13L:L:?1 R:R:L297 44.38528.39YesNo105
14R:R:F118 R:R:W117 42.90985.01YesYes169
15R:R:F118 R:R:N183 53.51588.46YesYes065
16R:R:N183 R:R:Y19 16.16223.49YesNo058
17R:R:I185 R:R:N183 26.91458.5NoYes035
18R:R:I185 R:R:I24 21.54272.94NoNo034
19R:R:I24 R:R:N21 10.78167.08NoNo048
20R:R:L112 R:R:R120 10.37182.43NoYes056
21R:R:L197 R:R:W117 15.851914.81NoYes149
22R:R:H28 R:R:L197 13.50419YesNo184
23R:R:M124 R:R:Y98 52.46497.18YesYes166
24R:R:L102 R:R:Y98 42.64935.86NoYes056
25R:R:I53 R:R:L102 14.48771.43NoNo035
26R:R:I53 R:R:S49 12.08723.1NoNo035
27R:R:L297 R:R:Y98 43.445610.55NoYes156
28R:R:F52 R:R:L102 26.25593.65YesNo065
29R:R:F52 R:R:T48 23.84077.78YesNo065
30R:R:K46 R:R:T48 14.27994.5NoNo045
31R:R:V298 R:R:Y98 28.5076.31NoYes056
32R:R:F52 R:R:V298 26.165110.49YesNo065
33R:R:F52 R:R:V51 23.94323.93YesNo065
34R:R:I55 R:R:V51 19.16573.07NoNo065
35R:R:C56 R:R:Y98 21.91745.38NoYes056
36R:R:C56 R:R:T99 19.50533.38NoNo056
37R:R:L128 R:R:S131 36.69793NoNo069
38R:R:S131 R:R:S304 36.16223.26NoNo099
39R:R:D91 R:R:S304 34.71315.89YesNo099
40R:R:D91 R:R:N63 48.71498.08YesNo099
41R:R:T99 R:R:V96 17.08723.17NoNo065
42R:R:I60 R:R:V96 14.66333.07NoNo065
43R:R:I60 R:R:L92 12.23364.28NoNo066
44R:R:A88 R:R:N63 40.58263.13YesNo099
45R:R:A88 R:R:V66 36.43743.39YesNo099
46R:R:I70 R:R:V66 35.04393.07YesNo079
47R:R:I70 R:R:Y81 27.98896.04YesYes079
48R:R:R78 R:R:Y81 13.59196.17NoYes079
49R:R:P79 R:R:R78 12.10482.88NoNo077
50R:R:P79 R:R:S155 10.61187.13NoNo077
51R:R:S129 R:R:S171 23.59196.52NoNo068
52R:R:A130 R:R:S171 23.04163.42NoNo078
53R:R:A130 R:R:W168 19.76873.89NoYes679
54R:R:N86 R:R:W168 17.35666.78NoYes099
55R:R:I164 R:R:N86 20.989514.16NoNo079
56R:R:F83 R:R:I164 19.62242.51YesNo087
57R:R:D91 R:R:L87 16.46378.14YesYes299
58R:R:L128 R:R:W269 63.35779.11NoYes068
59R:R:F265 R:R:W269 45.99826.01YesYes298
60R:R:F265 R:R:L135 51.09784.87YesYes299
61R:R:I138 R:R:L87 11.4114.28NoYes289
62R:R:L135 R:R:Y311 43.2263.52YesYes299
63R:R:F118 R:R:I179 16.16517.54YesNo065
64R:R:F210 R:R:W269 11.203212.03YesYes278
65R:R:R142 R:R:Y311 46.35836.17NoYes299
66R:R:R142 R:R:Y221 53.62129.26NoYes099
67R:R:A139 R:R:Y221 18.26114NoYes089
68R:R:A139 R:R:L220 16.76523.15NoNo087
69R:R:L220 R:R:Y143 15.26354.69NoYes078
70R:R:V258 R:R:Y221 27.04042.52NoYes089
71R:R:L254 R:R:V258 25.57081.49NoNo088
72R:R:L254 R:R:V228 12.22484.47NoNo088
73R:R:P178 R:R:Y198 12.35079.74NoYes154
74R:R:L195 R:R:V194 21.23242.98YesYes134
75R:R:L290 R:R:V194 13.92562.98YesYes134
76R:R:F210 R:R:F273 16.15636.43YesYes076
77R:R:L254 R:R:Y225 12.30395.86NoYes086
78R:R:G176 R:R:P178 12.80742.03NoNo045
79R:R:D18 R:R:Y19 10.78161.15NoNo068
80R:R:E121 R:R:Y198 16.5725.61YesYes154
81R:R:F118 R:R:Y198 31.83844.13YesYes164
82R:R:F125 R:R:Y198 13.568510.32YesYes154
83R:R:L195 R:R:Y198 15.196110.55YesYes134
84L:L:?1 R:R:K34 10.03513.21YesYes106
85R:R:N86 R:R:S134 10.61185.96NoNo098
86R:R:L87 R:R:S134 15.26054.5YesNo098
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:?1 R:R:Y29 7.99 1 Yes Yes 0 7 0 1
L:L:?1 R:R:K34 3.21 1 Yes Yes 0 6 0 1
L:L:?1 R:R:N101 12.48 1 Yes Yes 0 5 0 1
L:L:?1 R:R:S105 7.96 1 Yes No 0 4 0 1
L:L:?1 R:R:T109 5.58 1 Yes No 0 5 0 1
L:L:?1 R:R:R120 8.28 1 Yes Yes 0 6 0 1
L:L:?1 R:R:E121 9.04 1 Yes Yes 0 5 0 1
L:L:?1 R:R:M124 4.28 1 Yes Yes 0 6 0 1
L:L:?1 R:R:F125 17.53 1 Yes Yes 0 5 0 1
L:L:?1 R:R:L128 5.24 1 Yes No 0 6 0 1
L:L:?1 R:R:S129 6.83 1 Yes No 0 6 0 1
L:L:?1 R:R:L195 4.19 1 Yes Yes 0 3 0 1
L:L:?1 R:R:L297 8.39 1 Yes No 0 5 0 1
R:R:K34 R:R:Y29 9.55 1 Yes Yes 6 7 1 1
R:R:T109 R:R:Y29 6.24 1 No Yes 5 7 1 1
R:R:Y110 R:R:Y29 2.98 0 Yes Yes 5 7 2 1
R:R:W117 R:R:Y29 6.75 1 Yes Yes 9 7 2 1
R:R:P196 R:R:Y29 16.69 1 No Yes 3 7 2 1
R:R:K34 R:R:T32 4.5 1 Yes No 6 8 1 2
R:R:P196 R:R:T32 5.25 1 No No 3 8 2 2
R:R:K34 R:R:P196 5.02 1 Yes No 6 3 1 2
R:R:F291 R:R:K34 4.96 0 No Yes 1 6 2 1
R:R:M124 R:R:Y98 7.18 1 Yes Yes 6 6 1 2
R:R:L297 R:R:Y98 10.55 1 No Yes 5 6 1 2
R:R:N101 R:R:S105 2.98 1 Yes No 5 4 1 1
R:R:N101 R:R:R120 4.82 1 Yes Yes 5 6 1 1
R:R:E121 R:R:N101 3.94 1 Yes Yes 5 5 1 1
R:R:M124 R:R:N101 5.61 1 Yes Yes 6 5 1 1
R:R:G106 R:R:S105 3.71 0 No No 4 4 2 1
R:R:R120 R:R:T109 6.47 1 Yes No 6 5 1 1
R:R:R120 R:R:W117 6 1 Yes Yes 6 9 1 2
R:R:E121 R:R:W117 16.36 1 Yes Yes 5 9 1 2
R:R:L195 R:R:W117 3.42 1 Yes Yes 3 9 1 2
R:R:W117 R:R:Y198 4.82 1 Yes Yes 9 4 2 2
R:R:E121 R:R:R120 8.14 1 Yes Yes 5 6 1 1
R:R:E121 R:R:L195 6.63 1 Yes Yes 5 3 1 1
R:R:E121 R:R:Y198 5.61 1 Yes Yes 5 4 1 2
R:R:L297 R:R:M124 4.24 1 No Yes 5 6 1 1
R:R:F125 R:R:L195 3.65 1 Yes Yes 5 3 1 1
R:R:F125 R:R:Y198 10.32 1 Yes Yes 5 4 1 2
R:R:F125 R:R:Y202 7.22 1 Yes Yes 5 7 1 2
R:R:C206 R:R:F125 4.19 1 No Yes 6 5 2 1
R:R:L128 R:R:S131 3 0 No No 6 9 1 2
R:R:L128 R:R:W269 9.11 0 No Yes 6 8 1 2
R:R:S129 R:R:S171 6.52 0 No No 6 8 1 2
R:R:L195 R:R:V194 2.98 1 Yes Yes 3 4 1 2
R:R:L195 R:R:Y198 10.55 1 Yes Yes 3 4 1 2
R:R:Y198 R:R:Y202 4.96 1 Yes Yes 4 7 2 2
R:R:C206 R:R:Y202 9.41 1 No Yes 6 7 2 2
R:R:L112 R:R:R120 2.43 0 No Yes 5 6 2 1
R:R:E121 R:R:G122 1.64 1 Yes No 5 6 1 2

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 7TD3_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 2.98
Number of Linked Nodes 274
Number of Links 319
Number of Hubs 47
Number of Links mediated by Hubs 175
Number of Communities 6
Number of Nodes involved in Communities 60
Number of Links involved in Communities 98
Path Summary
Number Of Nodes in MetaPath 87
Number Of Links MetaPath 86
Number of Shortest Paths 87316
Length Of Smallest Path 3
Average Path Length 12.432
Length of Longest Path 29
Minimum Path Strength 1.305
Average Path Strength 5.97381
Maximum Path Strength 20.295
Minimum Path Correlation 0.7
Average Path Correlation 0.941047
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 4.7619
Average % Of Corr. Nodes 60.9688
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 50.0776
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process• developmental process   • multicellular organism development   • multicellular organismal process   • head development   • central nervous system development   • anatomical structure development   • animal organ development   • brain development   • nervous system development   • system development   • regulation of biological process   • cell adhesion   • regulation of cellular process   • regulation of cell adhesion   • biological regulation   • cellular process   • lamellipodium assembly   • plasma membrane bounded cell projection organization   • cell projection organization   • plasma membrane bounded cell projection assembly   • cellular component organization   • cellular component biogenesis   • cellular component assembly   • lamellipodium organization   • cellular component organization or biogenesis   • cell projection assembly   • blood vessel morphogenesis   • tube development   • angiogenesis   • vasculature development   • circulatory system development   • anatomical structure morphogenesis   • tube morphogenesis   • anatomical structure formation involved in morphogenesis   • blood vessel development   • regulation of cytoskeleton organization   • regulation of cellular component organization   • regulation of actin filament-based process   • negative regulation of biological process   • regulation of actin filament bundle assembly   • actin filament bundle organization   • actin filament-based process   • negative regulation of cellular process   • stress fiber assembly   • negative regulation of supramolecular fiber organization   • regulation of actin filament organization   • negative regulation of stress fiber assembly   • actin cytoskeleton organization   • actomyosin structure organization   • negative regulation of cellular component organization   • negative regulation of cytoskeleton organization   • actin filament organization   • regulation of cellular component biogenesis   • negative regulation of actin filament bundle assembly   • regulation of organelle organization   • regulation of stress fiber assembly   • organelle organization   • negative regulation of organelle organization   • contractile actin filament bundle assembly   • regulation of actomyosin structure organization   • regulation of actin cytoskeleton organization   • actin filament bundle assembly   • regulation of supramolecular fiber organization   • supramolecular fiber organization   • cytoskeleton organization   • cell population proliferation   • heart trabecula morphogenesis   • trabecula morphogenesis   • leukocyte migration   • immune system process   • mononuclear cell migration   • lymphocyte migration   • cell migration   • T cell migration   • cell motility   • cellular developmental process   • generation of neurons   • neurogenesis   • neuron differentiation   • cell differentiation   • epithelium development   • endothelial cell differentiation   • endothelium development   • tissue development   • epithelial cell differentiation   • homeostatic process   • regulation of bone remodeling   • tissue homeostasis   • regulation of tissue remodeling   • regulation of bone resorption   • bone resorption   • multicellular organismal-level homeostasis   • tissue remodeling   • bone remodeling   • anatomical structure homeostasis   • regulation of multicellular organismal process   • regulation of multicellular organismal development   • regulation of developmental process   • bone mineralization   • regulation of biomineral tissue development   • regulation of bone mineralization   • ossification   • biomineral tissue development   • regulation of ossification   • cellular response to stimulus   • response to stimulus   • signaling   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cell communication   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • signal transduction   • chemotaxis   • taxis   • response to chemical   • response to external stimulus   • locomotion   • metabolic process   • regulation of metabolic process   • positive chemotaxis   • positive regulation of locomotion   • regulation of response to external stimulus   • positive regulation of positive chemotaxis   • positive regulation of biological process   • regulation of chemotaxis   • positive regulation of chemotaxis   • positive regulation of response to stimulus   • regulation of positive chemotaxis   • positive regulation of response to external stimulus   • regulation of response to stimulus   • regulation of locomotion   • system process   • nervous system process   • transmission of nerve impulse   • phospholipase C-activating G protein-coupled receptor signaling pathway   • regulation of cell motility   • positive regulation of cell migration   • positive regulation of cell motility   • regulation of cell migration   • positive regulation of cellular process   • regulation of smooth muscle cell proliferation   • positive regulation of cell population proliferation   • smooth muscle cell proliferation   • positive regulation of smooth muscle cell proliferation   • regulation of cell population proliferation   • muscle cell proliferation   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • developmental growth   • heart morphogenesis   • organ growth   • striated muscle tissue development   • muscle structure development   • cardiac muscle tissue growth involved in heart morphogenesis   • animal organ morphogenesis   • cardiac muscle tissue growth   • muscle tissue development   • muscle organ development   • heart development   • heart growth   • cardiac muscle tissue development   • growth   • muscle tissue morphogenesis   • developmental growth involved in morphogenesis   • tissue morphogenesis   • cardiac muscle tissue morphogenesis   • growth involved in heart morphogenesis   • muscle organ morphogenesis   • cell chemotaxis   • cellular response to chemical stimulus   • leukocyte chemotaxis   • sphingolipid mediated signaling pathway   • sphingosine-1-phosphate receptor signaling pathway   • positive regulation of DNA-templated transcription   • RNA metabolic process   • positive regulation of macromolecule biosynthetic process   • regulation of primary metabolic process   • nucleobase-containing compound metabolic process   • RNA biosynthetic process   • nucleic acid biosynthetic process   • positive regulation of metabolic process   • DNA-templated transcription   • regulation of RNA metabolic process   • transcription by RNA polymerase II   • positive regulation of biosynthetic process   • positive regulation of macromolecule metabolic process   • regulation of nucleobase-containing compound metabolic process   • regulation of RNA biosynthetic process   • regulation of biosynthetic process   • regulation of transcription by RNA polymerase II   • primary metabolic process   • regulation of macromolecule metabolic process   • positive regulation of transcription by RNA polymerase II   • nucleobase-containing compound biosynthetic process   • gene expression   • macromolecule biosynthetic process   • nucleic acid metabolic process   • positive regulation of RNA metabolic process   • regulation of gene expression   • biosynthetic process   • positive regulation of RNA biosynthetic process   • regulation of macromolecule biosynthetic process   • macromolecule metabolic process   • regulation of DNA-templated transcription   • blood vessel maturation   • developmental maturation   • anatomical structure maturation   • cell periphery   • cellular anatomical structure   • cell surface   • membrane   • plasma membrane   • external side of plasma membrane   • side of membrane   • membrane-bounded organelle   • intracellular organelle   • intracellular anatomical structure   • organelle   • intracellular membrane-bounded organelle   • membrane microdomain   • membrane raft
Gene OntologyCellular Component• cell periphery   • cellular anatomical structure   • cell surface   • membrane   • plasma membrane   • external side of plasma membrane   • side of membrane   • membrane-bounded organelle   • intracellular organelle   • intracellular anatomical structure   • organelle   • intracellular membrane-bounded organelle   • membrane microdomain   • membrane raft   • presynapse   • synapse   • cell junction   • cytoplasm   • nucleus   • membrane-enclosed lumen   • intracellular organelle lumen   • nucleoplasm   • organelle lumen   • nuclear lumen   • endosome   • intracellular vesicle   • endomembrane system   • cytoplasmic vesicle   • vesicle   • protein binding   • binding   • G-protein beta-subunit binding   • pyrophosphatase activity   • GTPase activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • cellular response to nitrogen compound   • cellular response to stimulus   • response to dopamine   • regulation of cellular process   • response to stimulus   • signaling   • cellular response to dopamine   • response to monoamine   • cell communication   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • signal transduction   • regulation of biological process   • G protein-coupled dopamine receptor signaling pathway   • biological regulation   • response to oxygen-containing compound   • response to nitrogen compound   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cellular response to oxygen-containing compound   • cellular response to chemical stimulus   • cellular response to monoamine stimulus   • response to chemical   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • cellular process   • G protein-coupled receptor signaling pathway   • response to ketone   • response to prostaglandin   • response to lipid   • response to endogenous stimulus   • response to alcohol   • cellular response to prostaglandin stimulus   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to alcohol   • response to hormone   • cellular response to lipid   • response to prostaglandin E   • cellular response to ketone   • cellular response to hormone stimulus   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • membrane protein complex   • heterotrimeric G-protein complex   • cytoplasmic side of plasma membrane   • GTPase complex   • extrinsic component of membrane   • extrinsic component of cytoplasmic side of plasma membrane   • D2 dopamine receptor binding   • signaling receptor binding   • G protein-coupled receptor binding   • dopamine receptor binding   • enzyme regulator activity   • cyclase regulator activity   • molecular function regulator activity   • adenylate cyclase regulator activity   • GTPase activating protein binding   • guanyl nucleotide binding   • GTP binding   • nucleotide binding   • guanyl ribonucleotide binding   • purine ribonucleotide binding   • purine ribonucleoside triphosphate binding   • nucleoside phosphate binding   • ion binding   • purine nucleotide binding   • anion binding   • heterocyclic compound binding   • carbohydrate derivative binding   • ribonucleotide binding   • small molecule binding   • cation binding   • magnesium ion binding   • metal ion binding   • GDP binding   • G protein-coupled serotonin receptor binding   • protein-containing complex binding   • G-protein beta/gamma-subunit complex binding   • G protein activity   • protein localization to postsynaptic specialization membrane   • protein localization to postsynaptic membrane   • protein localization to cell periphery   • cellular localization   • protein localization to synapse   • localization within membrane   • protein localization to membrane   • protein-containing complex localization   • neurotransmitter receptor localization to postsynaptic specialization membrane   • localization   • regulation of postsynaptic membrane neurotransmitter receptor levels   • macromolecule localization   • protein localization to organelle   • protein localization to postsynapse   • intracellular protein localization   • regulation of biological quality   • protein localization to cell junction   • receptor localization to synapse   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • cell division   • leukocyte migration   • immune system process   • mononuclear cell migration   • lymphocyte migration   • cell migration   • T cell migration   • cell motility   • regulation of steroid biosynthetic process   • regulation of cholesterol biosynthetic process   • regulation of cholesterol metabolic process   • steroid metabolic process   • regulation of lipid metabolic process   • sterol metabolic process   • positive regulation of biological process   • cholesterol metabolic process   • lipid biosynthetic process   • alcohol metabolic process   • regulation of primary metabolic process   • positive regulation of metabolic process   • regulation of small molecule metabolic process   • positive regulation of biosynthetic process   • positive regulation of lipid metabolic process   • small molecule metabolic process   • steroid biosynthetic process   • positive regulation of cellular process   • regulation of biosynthetic process   • secondary alcohol biosynthetic process   • regulation of alcohol biosynthetic process   • small molecule biosynthetic process   • regulation of steroid metabolic process   • cholesterol biosynthetic process   • positive regulation of cholesterol biosynthetic process   • primary metabolic process   • secondary alcohol metabolic process   • positive regulation of steroid biosynthetic process   • biosynthetic process   • sterol biosynthetic process   • positive regulation of lipid biosynthetic process   • regulation of sterol biosynthetic process   • alcohol biosynthetic process   • positive regulation of cholesterol metabolic process   • positive regulation of steroid metabolic process   • metabolic process   • regulation of lipid biosynthetic process   • positive regulation of small molecule metabolic process   • regulation of metabolic process   • positive regulation of alcohol biosynthetic process   • positive regulation of sterol biosynthetic process   • lipid metabolic process   • regulation of cytoskeleton organization   • regulation of cellular component organization   • microtubule cytoskeleton organization   • regulation of mitotic spindle organization   • mitotic cell cycle   • cellular component organization   • cell cycle   • cellular component organization or biogenesis   • regulation of cell cycle   • microtubule cytoskeleton organization involved in mitosis   • spindle organization   • cell cycle process   • regulation of cell cycle process   • regulation of microtubule-based process   • regulation of spindle organization   • regulation of organelle organization   • mitotic spindle organization   • organelle organization   • mitotic cell cycle process   • microtubule-based process   • cytoskeleton organization   • regulation of microtubule cytoskeleton organization   • positive regulation of protein localization to cell periphery   • regulation of localization   • regulation of protein localization   • positive regulation of protein localization to cell cortex   • regulation of protein localization to cell periphery   • regulation of protein localization to cell cortex   • positive regulation of protein localization   • protein localization to cell cortex   • trans-synaptic signaling   • regulation of signaling   • negative regulation of signaling   • modulation of chemical synaptic transmission   • negative regulation of biological process   • cell-cell signaling   • negative regulation of synaptic transmission   • negative regulation of cell communication   • chemical synaptic transmission   • synaptic signaling   • regulation of trans-synaptic signaling   • anterograde trans-synaptic signaling   • negative regulation of cellular process   • regulation of cell communication   • cellular response to forskolin   • response to forskolin   • midbody   • cell cortex   • centrosome   • microtubule organizing center   • cytoskeleton   • membraneless organelle   • intracellular membraneless organelle   • microtubule cytoskeleton   • cytosol   • glutamatergic synapse   • postsynapse   • enzyme binding   • GTPase binding   • signaling receptor complex adaptor activity   • protein-macromolecule adaptor activity   • molecular adaptor activity   • signaling adaptor activity   • phospholipase C-activating G protein-coupled receptor signaling pathway   • multicellular organismal process   • system process   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of taste   • developmental process   • sensory organ development   • eye development   • animal organ development   • retina development in camera-type eye   • visual system development   • multicellular organism development   • camera-type eye development   • anatomical structure development   • sensory system development   • system development   • cell population proliferation   • non-motile cilium   • 9+0 non-motile cilium   • cilium   • neuron projection   • photoreceptor disc membrane   • photoreceptor outer segment   • plasma membrane bounded cell projection   • cell projection   • photoreceptor cell cilium   • organelle membrane
SCOP2Domain Identifier• G protein-coupled receptor-like   • Transducin (heterotrimeric G protein), gamma chain   • Ras-like P-loop GTPases   • WD40 repeat-like
SCOP2Family Identifier• G protein-coupled receptor-like   • Transducin (heterotrimeric G protein), gamma chain   • Ras-like P-loop GTPases   • WD40 repeat-like
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeNAG
PDB ResiduesH:H:?1
Environment DetailsOpen EMBL-EBI Page
CodeNAG
NameN-Acetylglucosamine
SynonymsN-Acetylglucosamine
Identifier
FormulaC8 H15 N O6
Molecular Weight221.208
SMILES
PubChem24139
Formal Charge0
Total Atoms30
Total Chiral Atoms5
Total Bonds30
Total Aromatic Bonds0

CodeS1P
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodeS1P
Name(2S,3R,4E)-2-amino-3-hydroxyoctadec-4-en-1-yl dihydrogen phosphate
Synonymssphingosine 1-phosphate
Identifier
FormulaC18 H38 N O5 P
Molecular Weight379.472
SMILES
PubChem5283560
Formal Charge0
Total Atoms63
Total Chiral Atoms2
Total Bonds62
Total Aromatic Bonds0

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP21453
Sequence
>7TD3_nogp_Chain_R
DYVNYDIIV RHYNYTGKL NISIKLTSV VFILICCFI ILENIFVLL 
TIWKTKKFH RPMYYFIGN LALSDLLAG VAYTANLLL SGATTYKLT 
PAQWFLREG SMFVALSAS VFSLLAIAI ERYITMLKM KLHNGSNNF 
RLFLLISAC WVISLILGG LPIMGWNCI SALSSCSTV LPLYHKHYI 
LFCTTVFTL LLLSIVILY CRIYSLVRT RSRRLTFRK SEKSLALLK 
TVIIVLSVF IACWAPLFI LLLLDVGCK VKTCDILFR AEYFLVLAV 
LNSGTNPII YTLTNKEMR RAFI


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
8G94ALipidLysophospholipidS1P1Homo sapiens-CD69Gi1/β1/γ23.152023-04-19doi.org/10.7554/eLife.88204
8G94 (No Gprot) ALipidLysophospholipidS1P1Homo sapiens-CD693.152023-04-19doi.org/10.7554/eLife.88204
7EVYALipidLysophospholipidS1P1Homo sapiensSiponimod-Gi1/β1/γ22.982021-09-29doi.org/10.1038/s41422-021-00566-x
7EVY (No Gprot) ALipidLysophospholipidS1P1Homo sapiensSiponimod-2.982021-09-29doi.org/10.1038/s41422-021-00566-x
7EVZALipidLysophospholipidS1P1Homo sapiensCenerimod-Gi1/β1/γ23.072021-09-29doi.org/10.1038/s41422-021-00566-x
7EVZ (No Gprot) ALipidLysophospholipidS1P1Homo sapiensCenerimod-3.072021-09-29doi.org/10.1038/s41422-021-00566-x
7EW0ALipidLysophospholipidS1P1Homo sapiensOzanimod-Gi1/β1/γ23.422021-09-29doi.org/10.1038/s41422-021-00566-x
7EW0 (No Gprot) ALipidLysophospholipidS1P1Homo sapiensOzanimod-3.422021-09-29doi.org/10.1038/s41422-021-00566-x
7EW7ALipidLysophospholipidS1P1Homo sapiensSEW2871-Gi1/β1/γ23.272021-09-29doi.org/10.1038/s41422-021-00566-x
7EW7 (No Gprot) ALipidLysophospholipidS1P1Homo sapiensSEW2871-3.272021-09-29doi.org/10.1038/s41422-021-00566-x
7TD3ALipidLysophospholipidS1P1Homo sapiensS1P-Gi1/β1/γ232022-02-09doi.org/10.1038/s41467-022-28417-2
7TD3 (No Gprot) ALipidLysophospholipidS1P1Homo sapiensS1P-32022-02-09doi.org/10.1038/s41467-022-28417-2
7TD4ALipidLysophospholipidS1P1Homo sapiensSiponimod-Gi1/β1/γ22.62022-02-09doi.org/10.1038/s41467-022-28417-2
7TD4 (No Gprot) ALipidLysophospholipidS1P1Homo sapiensSiponimod-2.62022-02-09doi.org/10.1038/s41467-022-28417-2
7EO2ALipidLysophospholipidS1P1Homo sapiensFTY720-P-Gi1/β1/γ22.892022-01-05doi.org/10.1038/s41589-021-00930-3
7EO2 (No Gprot) ALipidLysophospholipidS1P1Homo sapiensFTY720-P-2.892022-01-05doi.org/10.1038/s41589-021-00930-3
7EO4ALipidLysophospholipidS1P1Homo sapiensBAF312-Gi1/β1/γ22.862022-01-05doi.org/10.1038/s41589-021-00930-3
7EO4 (No Gprot) ALipidLysophospholipidS1P1Homo sapiensBAF312-2.862022-01-05doi.org/10.1038/s41589-021-00930-3
7WF7ALipidLysophospholipidS1P1Homo sapiensS1P-Gi1/β1/γ23.42022-01-05doi.org/10.1038/s41589-021-00930-3
7WF7 (No Gprot) ALipidLysophospholipidS1P1Homo sapiensS1P-3.42022-01-05doi.org/10.1038/s41589-021-00930-3
7VIEALipidLysophospholipidS1P1Homo sapiensS1P-Gi1/β1/γ22.862022-09-28doi.org/10.1073/pnas.2117716119
7VIE (No Gprot) ALipidLysophospholipidS1P1Homo sapiensS1P-2.862022-09-28doi.org/10.1073/pnas.2117716119
7VIFALipidLysophospholipidS1P1Homo sapiensS-FTY720-P-Gi1/β1/γ22.832022-09-28doi.org/10.1073/pnas.2117716119
7VIF (No Gprot) ALipidLysophospholipidS1P1Homo sapiensS-FTY720-P-2.832022-09-28doi.org/10.1073/pnas.2117716119
7VIGALipidLysophospholipidS1P1Homo sapiensCBP-307-Gi1/β1/γ22.892022-09-28doi.org/10.1073/pnas.2117716119
7VIG (No Gprot) ALipidLysophospholipidS1P1Homo sapiensCBP-307-2.892022-09-28doi.org/10.1073/pnas.2117716119
7VIHALipidLysophospholipidS1P1Homo sapiensCBP-307-Gi1/β1/γ22.982022-09-28doi.org/10.1073/pnas.2117716119
7VIH (No Gprot) ALipidLysophospholipidS1P1Homo sapiensCBP-307-2.982022-09-28doi.org/10.1073/pnas.2117716119
3V2WALipidLysophospholipidS1P1Homo sapiensPubChem 51892645--3.352012-02-15doi.org/10.1126/science.1215904
3V2YALipidLysophospholipidS1P1Homo sapiensPubChem 51892645--2.82012-02-15doi.org/10.1126/science.1215904
8YICALipidLysophospholipidS1P1Homo sapiensSAR247799-Gi1/β1/γ23.472024-12-11To be published
8YIC (No Gprot) ALipidLysophospholipidS1P1Homo sapiensSAR247799-3.472024-12-11To be published




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 7TD3_nogp.zip



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