Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:H28 8.3675418
2R:R:Y29 9.08667617
3R:R:K34 5.006516
4R:R:F52 6.426506
5R:R:Y81 9.2539
6R:R:F83 6.578548
7R:R:L87 6.414519
8R:R:D91 8.32519
9R:R:Y98 10.33716
10R:R:T113 5.96407
11R:R:W117 8.61714719
12R:R:F118 6.7625416
13R:R:R120 6.62286716
14R:R:E121 9.52833615
15R:R:R142 6.6625409
16R:R:Y143 7.9175408
17R:R:L160 5.0625447
18R:R:W168 3.8075409
19R:R:W182 5.8775405
20R:R:N183 6.8375405
21R:R:V194 4.912514
22R:R:L195 8.9525413
23R:R:Y198 8.22833614
24R:R:Y202 9.308517
25R:R:F210 8.4725417
26R:R:F265 5.902519
27R:R:W269 8.16571718
28R:R:F273 6.815406
29R:R:D279 6.1414
30R:R:L290 4.636513
31R:R:L297 8.23415
32R:R:N303 7.546519
33R:R:N307 8.85419
34R:R:P308 4.675409
35R:R:Y311 4.9075409
36R:R:M318 7.5625438
37L:L:?1 8.495291710
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:D23 R:R:R27 20.65683.57NoNo073
2R:R:L188 R:R:R27 23.09746.07NoNo023
3R:R:H28 R:R:L188 30.678912.86YesNo082
4R:R:H28 R:R:L197 38.245910.29YesNo184
5R:R:L197 R:R:W117 40.549613.67NoYes149
6R:R:R120 R:R:W117 21.64897YesYes169
7R:R:W117 R:R:Y29 21.39918.68YesYes197
8L:L:?1 R:R:Y29 24.50276.21YesYes107
9L:L:?1 R:R:R120 30.43145.63YesYes106
10L:L:?1 R:R:E121 27.063511.41YesYes105
11R:R:E121 R:R:W117 21.406315.27YesYes159
12R:R:D23 R:R:V26 10.36561.46NoNo076
13L:L:?1 R:R:L297 26.460612.83YesYes105
14R:R:E294 R:R:L297 12.23225.3NoYes135
15R:R:E294 R:R:F52 11.32177NoYes036
16L:L:?1 R:R:W269 1005.28YesYes108
17R:R:N303 R:R:W269 65.45359.04YesYes198
18R:R:N303 R:R:N307 44.94819.54YesYes199
19R:R:D91 R:R:N307 11.110312.12YesYes199
20R:R:D91 R:R:N63 13.336.73YesNo099
21R:R:N63 R:R:P308 12.47488.15NoYes099
22L:L:?1 R:R:F210 37.2498.07YesYes107
23R:R:F210 R:R:F265 36.94634.29YesYes179
24R:R:F265 R:R:L135 69.34034.87YesNo199
25R:R:L135 R:R:L87 68.12486.92NoYes199
26R:R:L87 R:R:S134 48.45064.5YesNo098
27R:R:N86 R:R:S134 45.02025.96NoNo098
28R:R:N86 R:R:W168 22.36726.78NoYes099
29R:R:L93 R:R:W168 16.83962.28NoYes069
30R:R:A127 R:R:L93 14.98753.15NoNo066
31R:R:A127 R:R:A94 13.13061.79NoNo068
32R:R:A94 R:R:G95 11.26891.95NoNo087
33R:R:F265 R:R:W269 35.44497.02YesYes198
34R:R:L87 R:R:N307 33.91956.87YesYes199
35R:R:N303 R:R:T306 22.23984.39YesNo095
36R:R:T306 R:R:V264 21.74024.76NoNo057
37R:R:I310 R:R:V264 21.28134.61NoNo087
38R:R:I310 R:R:Y311 15.81876.04NoYes089
39R:R:I84 R:R:Y311 18.60053.63NoYes089
40R:R:I70 R:R:I84 17.80532.94NoNo078
41R:R:I70 R:R:Y81 17.00546.04NoYes079
42R:R:I164 R:R:N86 22.316715.58NoNo079
43R:R:I138 R:R:L87 60.42814.28NoYes089
44R:R:I138 R:R:R142 58.92676.26NoYes089
45R:R:M80 R:R:R142 21.57924.96NoYes089
46R:R:E141 R:R:M80 19.8645.41NoNo098
47R:R:F83 R:R:I164 14.04826.28YesNo487
48R:R:F83 R:R:L163 11.244.87YesNo086
49R:R:F118 R:R:N183 12.73189.67YesYes065
50R:R:A139 R:R:Y221 24.10165.34NoNo089
51R:R:R142 R:R:Y221 39.49999.26YesNo099
52R:R:A139 R:R:L220 22.26634.73NoNo087
53R:R:E141 R:R:T145 16.70754.23NoNo098
54R:R:L220 R:R:Y143 20.42624.69NoYes078
55R:R:L147 R:R:Y143 13.01775.86NoYes068
56R:R:N153 R:R:T145 14.85544.39NoNo048
57R:R:K150 R:R:N153 12.99859.79NoNo074
58R:R:L147 R:R:L227 11.15114.15NoNo066
59R:R:W182 R:R:Y202 15.02599.65YesYes057
60R:R:P178 R:R:Y198 15.01639.74NoYes154
61L:L:?1 R:R:V194 16.24874.93YesYes104
62R:R:D279 R:R:V194 16.94777.3YesYes144
63R:R:C206 R:R:Y202 12.18659.41NoYes067
64L:L:?1 R:R:C206 13.11865.25YesNo006
65R:R:L262 R:R:Y221 14.63684.69NoNo079
66R:R:G176 R:R:P178 20.22442.03NoNo045
67R:R:G175 R:R:G176 12.14812.11NoNo064
68R:R:F118 R:R:W117 20.18355.01YesYes169
69L:L:?1 R:R:F125 18.15626.62YesNo105
70R:R:F125 R:R:Y202 12.08087.22NoYes157
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
R:R:K34 R:R:Y29 8.36 1 Yes Yes 6 7 1 1
R:R:T109 R:R:Y29 6.24 0 No Yes 5 7 2 1
R:R:Y110 R:R:Y29 6.95 0 No Yes 5 7 2 1
R:R:W117 R:R:Y29 8.68 1 Yes Yes 9 7 2 1
R:R:P196 R:R:Y29 18.08 1 No Yes 3 7 2 1
L:L:?1 R:R:Y29 6.21 1 Yes Yes 0 7 0 1
R:R:K34 R:R:T32 4.5 1 Yes No 6 8 1 2
R:R:P196 R:R:T32 8.74 1 No No 3 8 2 2
R:R:K34 R:R:P196 5.02 1 Yes No 6 3 1 2
L:L:?1 R:R:K34 4.67 1 Yes Yes 0 6 0 1
R:R:M124 R:R:Y98 8.38 1 No Yes 6 6 2 2
R:R:E294 R:R:Y98 11.22 1 No Yes 3 6 2 2
R:R:L297 R:R:Y98 10.55 1 Yes Yes 5 6 1 2
R:R:N101 R:R:R120 7.23 1 No Yes 5 6 1 1
L:L:?1 R:R:N101 13.64 1 Yes No 0 5 0 1
L:L:?1 R:R:S105 4.97 1 Yes No 0 4 0 1
R:R:R120 R:R:T109 6.47 1 Yes No 6 5 1 2
R:R:R120 R:R:W117 7 1 Yes Yes 6 9 1 2
R:R:E121 R:R:W117 15.27 1 Yes Yes 5 9 1 2
R:R:W117 R:R:Y198 4.82 1 Yes Yes 9 4 2 2
R:R:E121 R:R:R120 13.96 1 Yes Yes 5 6 1 1
L:L:?1 R:R:R120 5.63 1 Yes Yes 0 6 0 1
R:R:E121 R:R:L195 9.28 1 Yes Yes 5 3 1 1
R:R:E121 R:R:Y198 5.61 1 Yes Yes 5 4 1 2
L:L:?1 R:R:E121 11.41 1 Yes Yes 0 5 0 1
R:R:L297 R:R:M124 4.24 1 Yes No 5 6 1 2
R:R:F125 R:R:Y198 11.35 1 No Yes 5 4 1 2
R:R:F125 R:R:Y202 7.22 1 No Yes 5 7 1 2
L:L:?1 R:R:F125 26.62 1 Yes No 0 5 0 1
R:R:L128 R:R:W269 9.11 1 No Yes 6 8 1 1
L:L:?1 R:R:L128 6.42 1 Yes No 0 6 0 1
R:R:S129 R:R:S171 6.52 0 No No 6 8 1 2
L:L:?1 R:R:S129 8.95 1 Yes No 0 6 0 1
R:R:V132 R:R:W269 4.9 0 No Yes 7 8 2 1
R:R:L195 R:R:V194 4.47 1 Yes Yes 3 4 1 1
R:R:L276 R:R:V194 4.47 1 No Yes 6 4 1 1
R:R:D279 R:R:V194 7.3 1 Yes Yes 4 4 2 1
L:L:?1 R:R:V194 4.93 1 Yes Yes 0 4 0 1
R:R:L195 R:R:Y198 12.89 1 Yes Yes 3 4 1 2
L:L:?1 R:R:L195 9.17 1 Yes Yes 0 3 0 1
R:R:Y198 R:R:Y202 4.96 1 Yes Yes 4 7 2 2
R:R:C206 R:R:Y202 9.41 0 No Yes 6 7 1 2
L:L:?1 R:R:C206 5.25 1 Yes No 0 6 0 1
R:R:F210 R:R:F265 4.29 1 Yes Yes 7 9 1 2
R:R:F210 R:R:W269 14.03 1 Yes Yes 7 8 1 1
R:R:F210 R:R:F273 7.5 1 Yes Yes 7 6 1 2
L:L:?1 R:R:F210 8.07 1 Yes Yes 0 7 0 1
R:R:F265 R:R:W269 7.02 1 Yes Yes 9 8 2 1
R:R:F265 R:R:N303 8.46 1 Yes Yes 9 9 2 2
R:R:A300 R:R:W269 7.78 0 No Yes 7 8 2 1
R:R:N303 R:R:W269 9.04 1 Yes Yes 9 8 2 1
L:L:?1 R:R:W269 5.28 1 Yes Yes 0 8 0 1
R:R:L272 R:R:L276 6.92 0 No No 6 6 2 1
L:L:?1 R:R:L276 6.42 1 Yes No 0 6 0 1
R:R:E294 R:R:L297 5.3 1 No Yes 3 5 2 1
L:L:?1 R:R:L297 12.83 1 Yes Yes 0 5 0 1
L:L:?1 R:R:V209 3.95 1 Yes No 0 5 0 1
R:R:G106 R:R:S105 3.71 0 No No 4 4 2 1
R:R:L112 R:R:R120 3.64 0 No Yes 5 6 2 1
R:R:A293 R:R:V194 3.39 0 No Yes 4 4 2 1
R:R:F291 R:R:K34 2.48 0 No Yes 1 6 2 1
R:R:L104 R:R:R120 2.43 0 No Yes 4 6 2 1
R:R:E121 R:R:G122 1.64 1 Yes No 5 6 1 2
R:R:T208 R:R:V209 1.59 0 No No 4 5 2 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 7TD4_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 4.22
Number of Linked Nodes 278
Number of Links 310
Number of Hubs 37
Number of Links mediated by Hubs 151
Number of Communities 4
Number of Nodes involved in Communities 46
Number of Links involved in Communities 72
Path Summary
Number Of Nodes in MetaPath 71
Number Of Links MetaPath 70
Number of Shortest Paths 83008
Length Of Smallest Path 3
Average Path Length 13.3033
Length of Longest Path 27
Minimum Path Strength 1.145
Average Path Strength 6.77833
Maximum Path Strength 20.69
Minimum Path Correlation 0.7
Average Path Correlation 0.937169
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 5
Average % Of Corr. Nodes 61.0555
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 47.4737
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function• protein-containing complex binding   • binding   • protein binding   • enzyme binding   • GTPase binding   • pyrophosphatase activity   • GTPase activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • signaling receptor complex adaptor activity   • protein-macromolecule adaptor activity   • molecular adaptor activity   • signaling adaptor activity   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • phospholipase C-activating G protein-coupled receptor signaling pathway   • cell communication   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction   • multicellular organismal process   • system process   • sensory perception of chemical stimulus
Gene OntologyBiological Process• cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • phospholipase C-activating G protein-coupled receptor signaling pathway   • cell communication   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction   • multicellular organismal process   • system process   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of taste   • developmental process   • sensory organ development   • eye development   • animal organ development   • retina development in camera-type eye   • visual system development   • multicellular organism development   • camera-type eye development   • anatomical structure development   • sensory system development   • system development   • cell population proliferation   • cellular response to nitrogen compound   • response to dopamine   • cellular response to dopamine   • response to monoamine   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • G protein-coupled dopamine receptor signaling pathway   • response to oxygen-containing compound   • response to nitrogen compound   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cellular response to oxygen-containing compound   • cellular response to chemical stimulus   • cellular response to monoamine stimulus   • response to chemical   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • response to ketone   • response to prostaglandin   • response to lipid   • response to endogenous stimulus   • response to alcohol   • cellular response to prostaglandin stimulus   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to alcohol   • response to hormone   • cellular response to lipid   • response to prostaglandin E   • cellular response to ketone   • cellular response to hormone stimulus   • cellular anatomical structure   • membrane   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • plasma membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cell periphery   • cytoplasmic side of plasma membrane   • GTPase complex
Gene OntologyCellular Component• cellular anatomical structure   • membrane   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • plasma membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cell periphery   • cytoplasmic side of plasma membrane   • GTPase complex   • extrinsic component of membrane   • extrinsic component of cytoplasmic side of plasma membrane   • membrane-bounded organelle   • non-motile cilium   • 9+0 non-motile cilium   • cilium   • neuron projection   • photoreceptor disc membrane   • photoreceptor outer segment   • plasma membrane bounded cell projection   • cell projection   • photoreceptor cell cilium   • organelle   • organelle membrane   • synapse   • cell junction   • intracellular anatomical structure   • cytoplasm   • D2 dopamine receptor binding   • protein binding   • binding   • signaling receptor binding   • G protein-coupled receptor binding   • dopamine receptor binding   • enzyme regulator activity   • cyclase regulator activity   • molecular function regulator activity   • adenylate cyclase regulator activity   • GTPase activating protein binding   • guanyl nucleotide binding   • GTP binding   • nucleotide binding   • guanyl ribonucleotide binding   • purine ribonucleotide binding   • purine ribonucleoside triphosphate binding   • nucleoside phosphate binding   • ion binding   • purine nucleotide binding   • anion binding   • heterocyclic compound binding   • carbohydrate derivative binding   • ribonucleotide binding   • small molecule binding   • cation binding   • magnesium ion binding   • metal ion binding   • GDP binding   • G protein-coupled serotonin receptor binding   • protein-containing complex binding   • G-protein beta/gamma-subunit complex binding   • pyrophosphatase activity   • GTPase activity   • G protein activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • protein localization to postsynaptic specialization membrane   • protein localization to postsynaptic membrane   • protein localization to cell periphery   • cellular localization   • protein localization to synapse   • biological regulation   • localization within membrane   • protein localization to membrane   • protein-containing complex localization   • neurotransmitter receptor localization to postsynaptic specialization membrane   • localization   • regulation of postsynaptic membrane neurotransmitter receptor levels   • macromolecule localization   • protein localization to organelle   • cellular process   • protein localization to postsynapse   • intracellular protein localization   • regulation of biological quality   • protein localization to cell junction   • receptor localization to synapse   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • cell communication   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • signal transduction   • cell division   • leukocyte migration   • immune system process   • mononuclear cell migration   • lymphocyte migration   • cell migration   • T cell migration   • cell motility   • regulation of steroid biosynthetic process   • regulation of cholesterol biosynthetic process   • regulation of cholesterol metabolic process   • steroid metabolic process   • regulation of lipid metabolic process   • sterol metabolic process   • positive regulation of biological process   • cholesterol metabolic process   • lipid biosynthetic process   • alcohol metabolic process   • regulation of primary metabolic process   • positive regulation of metabolic process   • regulation of small molecule metabolic process   • positive regulation of biosynthetic process   • positive regulation of lipid metabolic process   • small molecule metabolic process   • steroid biosynthetic process   • positive regulation of cellular process   • regulation of biosynthetic process   • secondary alcohol biosynthetic process   • regulation of alcohol biosynthetic process   • small molecule biosynthetic process   • regulation of steroid metabolic process   • cholesterol biosynthetic process   • positive regulation of cholesterol biosynthetic process   • primary metabolic process   • secondary alcohol metabolic process   • positive regulation of steroid biosynthetic process   • biosynthetic process   • sterol biosynthetic process   • positive regulation of lipid biosynthetic process   • regulation of sterol biosynthetic process   • alcohol biosynthetic process   • positive regulation of cholesterol metabolic process   • positive regulation of steroid metabolic process   • metabolic process   • regulation of lipid biosynthetic process   • positive regulation of small molecule metabolic process   • regulation of metabolic process   • positive regulation of alcohol biosynthetic process   • positive regulation of sterol biosynthetic process   • lipid metabolic process   • regulation of cytoskeleton organization   • regulation of cellular component organization   • microtubule cytoskeleton organization   • regulation of mitotic spindle organization   • mitotic cell cycle   • cellular component organization   • cell cycle   • cellular component organization or biogenesis   • regulation of cell cycle   • microtubule cytoskeleton organization involved in mitosis   • spindle organization   • cell cycle process   • regulation of cell cycle process   • regulation of microtubule-based process   • regulation of spindle organization   • regulation of organelle organization   • mitotic spindle organization   • organelle organization   • mitotic cell cycle process   • microtubule-based process   • cytoskeleton organization   • regulation of microtubule cytoskeleton organization   • positive regulation of protein localization to cell periphery   • regulation of localization   • regulation of protein localization   • positive regulation of protein localization to cell cortex   • regulation of protein localization to cell periphery   • regulation of protein localization to cell cortex   • positive regulation of protein localization   • protein localization to cell cortex   • response to ketone   • response to prostaglandin   • response to lipid   • response to hormone   • response to chemical   • response to endogenous stimulus   • response to alcohol   • response to prostaglandin E   • response to oxygen-containing compound   • trans-synaptic signaling   • regulation of signaling   • negative regulation of signaling   • modulation of chemical synaptic transmission   • negative regulation of biological process   • cell-cell signaling   • negative regulation of synaptic transmission   • negative regulation of cell communication   • chemical synaptic transmission   • synaptic signaling   • regulation of trans-synaptic signaling   • anterograde trans-synaptic signaling   • negative regulation of cellular process   • regulation of cell communication   • cellular response to forskolin   • cellular response to oxygen-containing compound   • cellular response to chemical stimulus   • cellular response to alcohol   • response to forskolin   • cellular response to lipid   • cellular response to ketone   • midbody   • cell cortex   • intracellular organelle   • centrosome   • microtubule organizing center   • cytoskeleton   • membraneless organelle   • intracellular membraneless organelle   • microtubule cytoskeleton   • cytosol   • glutamatergic synapse   • postsynapse   • nucleus   • intracellular membrane-bounded organelle   • G-protein beta-subunit binding   • cellular response to nitrogen compound   • response to dopamine   • cellular response to dopamine   • response to monoamine   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • G protein-coupled dopamine receptor signaling pathway   • response to nitrogen compound   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cellular response to monoamine stimulus   • cellular response to prostaglandin stimulus   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to hormone stimulus   • molecular transducer activity   • G protein-coupled receptor activity   • transmembrane signaling receptor activity   • signaling receptor activity   • sphingolipid binding   • lipid binding   • bioactive lipid receptor activity   • sphingosine-1-phosphate receptor activity   • developmental process   • multicellular organism development   • multicellular organismal process   • head development   • central nervous system development   • anatomical structure development   • animal organ development   • brain development   • nervous system development   • system development   • cell adhesion   • regulation of cell adhesion   • lamellipodium assembly   • plasma membrane bounded cell projection organization   • cell projection organization   • plasma membrane bounded cell projection assembly   • cellular component biogenesis   • cellular component assembly   • lamellipodium organization   • cell projection assembly   • blood vessel morphogenesis   • tube development   • angiogenesis   • vasculature development   • circulatory system development   • anatomical structure morphogenesis   • tube morphogenesis   • anatomical structure formation involved in morphogenesis   • blood vessel development   • regulation of actin filament-based process   • regulation of actin filament bundle assembly   • actin filament bundle organization   • actin filament-based process   • stress fiber assembly   • negative regulation of supramolecular fiber organization   • regulation of actin filament organization   • negative regulation of stress fiber assembly   • actin cytoskeleton organization   • actomyosin structure organization   • negative regulation of cellular component organization   • negative regulation of cytoskeleton organization   • actin filament organization   • regulation of cellular component biogenesis   • negative regulation of actin filament bundle assembly   • regulation of stress fiber assembly   • negative regulation of organelle organization   • contractile actin filament bundle assembly   • regulation of actomyosin structure organization   • regulation of actin cytoskeleton organization   • actin filament bundle assembly   • regulation of supramolecular fiber organization   • supramolecular fiber organization   • cell population proliferation   • heart trabecula morphogenesis   • trabecula morphogenesis   • cellular developmental process   • generation of neurons   • neurogenesis   • neuron differentiation   • cell differentiation   • epithelium development   • endothelial cell differentiation   • endothelium development   • tissue development   • epithelial cell differentiation   • homeostatic process   • regulation of bone remodeling   • tissue homeostasis   • regulation of tissue remodeling   • regulation of bone resorption   • bone resorption   • multicellular organismal-level homeostasis   • tissue remodeling   • bone remodeling   • anatomical structure homeostasis   • regulation of multicellular organismal process   • regulation of multicellular organismal development   • regulation of developmental process   • bone mineralization   • regulation of biomineral tissue development   • regulation of bone mineralization   • ossification   • biomineral tissue development   • regulation of ossification   • chemotaxis   • taxis   • response to external stimulus   • locomotion   • positive chemotaxis   • positive regulation of locomotion   • regulation of response to external stimulus   • positive regulation of positive chemotaxis   • regulation of chemotaxis   • positive regulation of chemotaxis   • positive regulation of response to stimulus   • regulation of positive chemotaxis   • positive regulation of response to external stimulus   • regulation of response to stimulus   • regulation of locomotion   • system process   • nervous system process   • transmission of nerve impulse   • phospholipase C-activating G protein-coupled receptor signaling pathway   • regulation of cell motility   • positive regulation of cell migration   • positive regulation of cell motility   • regulation of cell migration   • regulation of smooth muscle cell proliferation   • positive regulation of cell population proliferation   • smooth muscle cell proliferation   • positive regulation of smooth muscle cell proliferation   • regulation of cell population proliferation   • muscle cell proliferation   • developmental growth   • heart morphogenesis   • organ growth   • striated muscle tissue development   • muscle structure development   • cardiac muscle tissue growth involved in heart morphogenesis   • animal organ morphogenesis   • cardiac muscle tissue growth   • muscle tissue development   • muscle organ development   • heart development   • heart growth   • cardiac muscle tissue development   • growth   • muscle tissue morphogenesis   • developmental growth involved in morphogenesis   • tissue morphogenesis   • cardiac muscle tissue morphogenesis   • growth involved in heart morphogenesis   • muscle organ morphogenesis   • cell chemotaxis   • leukocyte chemotaxis   • sphingolipid mediated signaling pathway   • sphingosine-1-phosphate receptor signaling pathway   • positive regulation of DNA-templated transcription   • RNA metabolic process   • positive regulation of macromolecule biosynthetic process   • nucleobase-containing compound metabolic process   • RNA biosynthetic process   • nucleic acid biosynthetic process   • DNA-templated transcription   • regulation of RNA metabolic process   • transcription by RNA polymerase II   • positive regulation of macromolecule metabolic process   • regulation of nucleobase-containing compound metabolic process   • regulation of RNA biosynthetic process   • regulation of transcription by RNA polymerase II   • regulation of macromolecule metabolic process   • positive regulation of transcription by RNA polymerase II   • nucleobase-containing compound biosynthetic process   • gene expression   • macromolecule biosynthetic process   • nucleic acid metabolic process   • positive regulation of RNA metabolic process   • regulation of gene expression   • positive regulation of RNA biosynthetic process   • regulation of macromolecule biosynthetic process   • macromolecule metabolic process   • regulation of DNA-templated transcription   • blood vessel maturation   • developmental maturation   • anatomical structure maturation   • cell surface   • external side of plasma membrane   • membrane microdomain   • membrane raft   • presynapse   • membrane-enclosed lumen   • intracellular organelle lumen   • nucleoplasm   • organelle lumen   • nuclear lumen   • endosome   • intracellular vesicle   • endomembrane system   • cytoplasmic vesicle   • vesicle
SCOP2Domain Identifier• WD40 repeat-like   • Ras-like P-loop GTPases   • G protein-coupled receptor-like
SCOP2Family Identifier• WD40 repeat-like   • Ras-like P-loop GTPases   • G protein-coupled receptor-like
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeJ8C
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodeJ8C
NameSiponimod
Synonyms
  • Siponimod fumarate
  • Siponimod
Identifier
FormulaC29 H35 F3 N2 O3
Molecular Weight516.595
SMILES
PubChem72959169
Formal Charge0
Total Atoms72
Total Chiral Atoms0
Total Bonds75
Total Aromatic Bonds12

CodeNAG
PDB ResiduesH:H:?1
Environment DetailsOpen EMBL-EBI Page
CodeNAG
NameN-Acetylglucosamine
SynonymsN-Acetylglucosamine
Identifier
FormulaC8 H15 N O6
Molecular Weight221.208
SMILES
PubChem24139
Formal Charge0
Total Atoms30
Total Chiral Atoms5
Total Bonds30
Total Aromatic Bonds0

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP21453
Sequence
>7TD4_nogp_Chain_R
DYVNYDIIV RHYNYTGKL NIKLTSVVF ILICCFIIL ENIFVLLTI 
WKTKKFHRP MYYFIGNLA LSDLLAGVA YTANLLLSG ATTYKLTPA 
QWFLREGSM FVALSASVF SLLAIAIER YITMLKMKL HNGSNNFRL 
FLLISACWV ISLILGGLP IMGWNCISA LSSCSTVLP LYHKHYILF 
CTTVFTLLL LSIVILYCR IYSLVRTRS RRLTFRKSE KSLALLKTV 
IIVLSVFIA CWAPLFILL LLDVGCKVK TCDILFRAE YFLVLAVLN 
SGTNPIIYT LTNKEMRRA FI


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
8G94ALipidLysophospholipidS1P1Homo sapiens-CD69Gi1/β1/γ23.152023-04-19doi.org/10.7554/eLife.88204
8G94 (No Gprot) ALipidLysophospholipidS1P1Homo sapiens-CD693.152023-04-19doi.org/10.7554/eLife.88204
7EVYALipidLysophospholipidS1P1Homo sapiensSiponimod-Gi1/β1/γ22.982021-09-29doi.org/10.1038/s41422-021-00566-x
7EVY (No Gprot) ALipidLysophospholipidS1P1Homo sapiensSiponimod-2.982021-09-29doi.org/10.1038/s41422-021-00566-x
7EVZALipidLysophospholipidS1P1Homo sapiensCenerimod-Gi1/β1/γ23.072021-09-29doi.org/10.1038/s41422-021-00566-x
7EVZ (No Gprot) ALipidLysophospholipidS1P1Homo sapiensCenerimod-3.072021-09-29doi.org/10.1038/s41422-021-00566-x
7EW0ALipidLysophospholipidS1P1Homo sapiensOzanimod-Gi1/β1/γ23.422021-09-29doi.org/10.1038/s41422-021-00566-x
7EW0 (No Gprot) ALipidLysophospholipidS1P1Homo sapiensOzanimod-3.422021-09-29doi.org/10.1038/s41422-021-00566-x
7EW7ALipidLysophospholipidS1P1Homo sapiensSEW2871-Gi1/β1/γ23.272021-09-29doi.org/10.1038/s41422-021-00566-x
7EW7 (No Gprot) ALipidLysophospholipidS1P1Homo sapiensSEW2871-3.272021-09-29doi.org/10.1038/s41422-021-00566-x
7TD3ALipidLysophospholipidS1P1Homo sapiensS1P-Gi1/β1/γ232022-02-09doi.org/10.1038/s41467-022-28417-2
7TD3 (No Gprot) ALipidLysophospholipidS1P1Homo sapiensS1P-32022-02-09doi.org/10.1038/s41467-022-28417-2
7TD4ALipidLysophospholipidS1P1Homo sapiensSiponimod-Gi1/β1/γ22.62022-02-09doi.org/10.1038/s41467-022-28417-2
7TD4 (No Gprot) ALipidLysophospholipidS1P1Homo sapiensSiponimod-2.62022-02-09doi.org/10.1038/s41467-022-28417-2
7EO2ALipidLysophospholipidS1P1Homo sapiensFTY720-P-Gi1/β1/γ22.892022-01-05doi.org/10.1038/s41589-021-00930-3
7EO2 (No Gprot) ALipidLysophospholipidS1P1Homo sapiensFTY720-P-2.892022-01-05doi.org/10.1038/s41589-021-00930-3
7EO4ALipidLysophospholipidS1P1Homo sapiensBAF312-Gi1/β1/γ22.862022-01-05doi.org/10.1038/s41589-021-00930-3
7EO4 (No Gprot) ALipidLysophospholipidS1P1Homo sapiensBAF312-2.862022-01-05doi.org/10.1038/s41589-021-00930-3
7WF7ALipidLysophospholipidS1P1Homo sapiensS1P-Gi1/β1/γ23.42022-01-05doi.org/10.1038/s41589-021-00930-3
7WF7 (No Gprot) ALipidLysophospholipidS1P1Homo sapiensS1P-3.42022-01-05doi.org/10.1038/s41589-021-00930-3
7VIEALipidLysophospholipidS1P1Homo sapiensS1P-Gi1/β1/γ22.862022-09-28doi.org/10.1073/pnas.2117716119
7VIE (No Gprot) ALipidLysophospholipidS1P1Homo sapiensS1P-2.862022-09-28doi.org/10.1073/pnas.2117716119
7VIFALipidLysophospholipidS1P1Homo sapiensS-FTY720-P-Gi1/β1/γ22.832022-09-28doi.org/10.1073/pnas.2117716119
7VIF (No Gprot) ALipidLysophospholipidS1P1Homo sapiensS-FTY720-P-2.832022-09-28doi.org/10.1073/pnas.2117716119
7VIGALipidLysophospholipidS1P1Homo sapiensCBP-307-Gi1/β1/γ22.892022-09-28doi.org/10.1073/pnas.2117716119
7VIG (No Gprot) ALipidLysophospholipidS1P1Homo sapiensCBP-307-2.892022-09-28doi.org/10.1073/pnas.2117716119
7VIHALipidLysophospholipidS1P1Homo sapiensCBP-307-Gi1/β1/γ22.982022-09-28doi.org/10.1073/pnas.2117716119
7VIH (No Gprot) ALipidLysophospholipidS1P1Homo sapiensCBP-307-2.982022-09-28doi.org/10.1073/pnas.2117716119
3V2WALipidLysophospholipidS1P1Homo sapiensPubChem 51892645--3.352012-02-15doi.org/10.1126/science.1215904
3V2YALipidLysophospholipidS1P1Homo sapiensPubChem 51892645--2.82012-02-15doi.org/10.1126/science.1215904
8YICALipidLysophospholipidS1P1Homo sapiensSAR247799-Gi1/β1/γ23.472024-12-11To be published
8YIC (No Gprot) ALipidLysophospholipidS1P1Homo sapiensSAR247799-3.472024-12-11To be published




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 7TD4_nogp.zip



You can click to copy the link of this page to easily come back here later

or use this QR code to link and share this page.



You can also  read or  download a guide explaining the meaning of all files and numerical data.