Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:?1 6.56251610
2R:R:Y29 5.98507
3R:R:F52 5.55406
4R:R:N63 6.18409
5R:R:F76 9.0625408
6R:R:F83 5.598508
7R:R:A88 1.6975409
8R:R:L92 3.1325406
9R:R:Y98 6.0525406
10R:R:W117 7.16667619
11R:R:F118 6.8375406
12R:R:R120 5.132506
13R:R:E121 8.685415
14R:R:I138 4.105408
15R:R:L160 4.7725407
16R:R:P178 6.9575415
17R:R:L188 5.245422
18R:R:V194 2.81514
19R:R:L195 5.008513
20R:R:Y198 5.574514
21R:R:H199 7.045404
22R:R:Y202 5.96417
23R:R:Y225 3.7775446
24R:R:W269 8.02167618
25R:R:L272 3.144516
26R:R:L276 3.864516
27R:R:D279 3.155404
28R:R:L290 3.6375403
29R:R:L297 4.3325415
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:?1 R:R:E121 22.037810.91YesYes105
2R:R:E121 R:R:Y198 13.52827.86YesYes154
3R:R:F118 R:R:Y198 18.71794.13YesYes064
4R:R:F118 R:R:N183 13.59828.46YesNo065
5R:R:I185 R:R:N183 12.12497.08NoNo035
6L:L:?1 R:R:L195 21.88236.21YesYes103
7R:R:L195 R:R:Y198 15.34364.69YesYes134
8R:R:L195 R:R:W117 11.01315.69YesYes139
9L:L:?1 R:R:L297 17.45458.29YesYes105
10R:R:L297 R:R:Y98 23.88434.69YesYes056
11R:R:F52 R:R:Y98 18.86954.13YesYes066
12R:R:F52 R:R:L102 10.35613.65YesNo065
13L:L:?1 R:R:W269 86.69344.26YesYes108
14R:R:N303 R:R:W269 1009.04NoYes098
15R:R:N303 R:R:N307 99.08268.17NoNo099
16R:R:N307 R:R:P308 39.04521.63NoNo099
17R:R:D91 R:R:P308 37.99953.22NoNo099
18R:R:D91 R:R:N63 26.041813.46NoYes099
19R:R:L92 R:R:N63 16.96086.87YesYes069
20R:R:L135 R:R:N307 74.52964.12NoNo099
21R:R:L135 R:R:L87 49.44022.77NoNo099
22R:R:I138 R:R:L87 47.54322.85YesNo089
23R:R:F83 R:R:I138 35.69433.77YesYes088
24R:R:E141 R:R:F83 22.947410.49NoYes098
25R:R:E141 R:R:M80 20.63058.12NoNo098
26R:R:M80 R:R:R78 18.31753.72NoNo087
27R:R:R78 R:R:Y81 14.861614.4NoNo079
28R:R:F76 R:R:Y81 10.286118.57YesNo089
29R:R:F83 R:R:L160 11.96557.31YesYes087
30R:R:D91 R:R:S304 13.1555.89NoNo099
31L:L:?1 R:R:F125 11.176325.52YesNo105
32R:R:F125 R:R:Y202 10.23565.16NoYes157
33L:L:?1 R:R:C206 11.25024.75YesNo106
34R:R:C206 R:R:Y202 10.31334.03NoYes167
35R:R:P178 R:R:Y198 10.13459.74YesYes154
36R:R:G176 R:R:P178 11.37852.03NoYes045
37R:R:V132 R:R:W269 11.64677.36NoYes078
38R:R:L213 R:R:V132 10.38331.49NoNo087
39R:R:I217 R:R:L135 35.02182.85NoNo089
40R:R:I217 R:R:L136 33.915.71NoNo087
41R:R:I140 R:R:L136 31.6637.14NoNo067
42R:R:I138 R:R:Y311 10.35226.04YesNo089
43R:R:I140 R:R:L220 23.63552.85NoNo067
44R:R:L220 R:R:Y143 21.24864.69NoNo078
45R:R:L147 R:R:Y143 18.82683.52NoNo068
46R:R:L147 R:R:L227 17.59841.38NoNo066
47R:R:L227 R:R:M146 13.98311.41NoNo068
48R:R:M146 R:R:V228 11.47183.04NoNo088
49R:R:L177 R:R:Y202 12.4673.52NoYes157
50R:R:L177 R:R:W182 12.97624.56NoNo055
51R:R:H199 R:R:W182 11.14521.06YesNo045
52L:L:?1 R:R:V194 11.94223.34YesYes104
53R:R:D279 R:R:V194 12.71192.92YesYes044
54R:R:D279 R:R:L290 22.11554.07YesYes043
55L:L:?1 R:R:L276 12.97235.18YesYes106
56R:R:D279 R:R:L276 18.09982.71YesYes046
57R:R:L254 R:R:V228 10.20454.47NoNo088
58R:R:C287 R:R:L290 11.1534.76NoYes033
59R:R:L272 R:R:W269 17.04633.42YesYes168
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:?1 R:R:K34 3.17 1 Yes No 0 6 0 1
L:L:?1 R:R:E121 10.91 1 Yes Yes 0 5 0 1
L:L:?1 R:R:M124 5.29 1 Yes No 0 6 0 1
L:L:?1 R:R:F125 25.52 1 Yes No 0 5 0 1
L:L:?1 R:R:L128 7.25 1 Yes No 0 6 0 1
L:L:?1 R:R:S129 3.37 1 Yes No 0 6 0 1
L:L:?1 R:R:V194 3.34 1 Yes Yes 0 4 0 1
L:L:?1 R:R:L195 6.21 1 Yes Yes 0 3 0 1
L:L:?1 R:R:C206 4.75 1 Yes No 0 6 0 1
L:L:?1 R:R:F210 8.2 1 Yes No 0 7 0 1
L:L:?1 R:R:W269 4.26 1 Yes Yes 0 8 0 1
L:L:?1 R:R:L272 5.18 1 Yes Yes 0 6 0 1
L:L:?1 R:R:L276 5.18 1 Yes Yes 0 6 0 1
L:L:?1 R:R:E294 2.97 1 Yes No 0 3 0 1
L:L:?1 R:R:L297 8.29 1 Yes Yes 0 5 0 1
R:R:K34 R:R:Y29 5.97 0 No Yes 6 7 1 2
R:R:W117 R:R:Y29 5.79 1 Yes Yes 9 7 2 2
R:R:L297 R:R:Y98 4.69 1 Yes Yes 5 6 1 2
R:R:M124 R:R:N101 5.61 0 No No 6 5 1 2
R:R:E121 R:R:W117 11.99 1 Yes Yes 5 9 1 2
R:R:L195 R:R:W117 5.69 1 Yes Yes 3 9 1 2
R:R:E121 R:R:L195 3.98 1 Yes Yes 5 3 1 1
R:R:E121 R:R:Y198 7.86 1 Yes Yes 5 4 1 2
R:R:F125 R:R:Y202 5.16 1 No Yes 5 7 1 2
R:R:C206 R:R:F125 2.79 1 No No 6 5 1 1
R:R:V132 R:R:W269 7.36 0 No Yes 7 8 2 1
R:R:L195 R:R:V194 4.47 1 Yes Yes 3 4 1 1
R:R:D279 R:R:V194 2.92 0 Yes Yes 4 4 2 1
R:R:L195 R:R:Y198 4.69 1 Yes Yes 3 4 1 2
R:R:C206 R:R:Y202 4.03 1 No Yes 6 7 1 2
R:R:I203 R:R:L276 5.71 0 No Yes 6 6 2 1
R:R:F273 R:R:T207 2.59 0 No No 6 5 2 2
R:R:L276 R:R:T207 2.95 1 Yes No 6 5 1 2
R:R:F210 R:R:W269 13.03 1 No Yes 7 8 1 1
R:R:F210 R:R:F273 5.36 1 No No 7 6 1 2
R:R:F265 R:R:W269 11.02 0 No Yes 9 8 2 1
R:R:L272 R:R:W269 3.42 1 Yes Yes 6 8 1 1
R:R:N303 R:R:W269 9.04 0 No Yes 9 8 2 1
R:R:L272 R:R:L276 2.77 1 Yes Yes 6 6 1 1
R:R:L272 R:R:L297 2.77 1 Yes Yes 6 5 1 1
R:R:D279 R:R:L276 2.71 0 Yes Yes 4 6 2 1
R:R:A293 R:R:V194 1.7 0 No Yes 4 4 2 1
R:R:S192 R:R:V194 1.62 0 No Yes 4 4 2 1
R:R:A300 R:R:L272 1.58 1 No Yes 7 6 2 1
R:R:A300 R:R:L297 1.58 1 No Yes 7 5 2 1
L:L:?1 R:R:V209 1.11 1 Yes No 0 5 0 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 7EW0_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 2.57
Number of Linked Nodes 262
Number of Links 277
Number of Hubs 29
Number of Links mediated by Hubs 110
Number of Communities 5
Number of Nodes involved in Communities 29
Number of Links involved in Communities 41
Path Summary
Number Of Nodes in MetaPath 60
Number Of Links MetaPath 59
Number of Shortest Paths 44491
Length Of Smallest Path 3
Average Path Length 12.5967
Length of Longest Path 27
Minimum Path Strength 1.255
Average Path Strength 5.36871
Maximum Path Strength 18.215
Minimum Path Correlation 0.7
Average Path Correlation 0.931697
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 4.16667
Average % Of Corr. Nodes 56.3336
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 37.725
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier• G protein-coupled receptor-like   • Transducin (heterotrimeric G protein), gamma chain   • Ras-like P-loop GTPases
SCOP2Family Identifier• G protein-coupled receptor-like   • Transducin (heterotrimeric G protein), gamma chain   • Ras-like P-loop GTPases
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeJEU
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodeJEU
NameOzanimod
Synonyms
  • Ozanimodum
  • Ozanimod
  • Ozanimod hydrochloride
Identifier
FormulaC23 H24 N4 O3
Molecular Weight404.462
SMILES
PubChem52938427
Formal Charge0
Total Atoms54
Total Chiral Atoms1
Total Bonds57
Total Aromatic Bonds17

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP21453
Sequence
>7EW0_nogp_Chain_R
YDIIVRHYN YTGKLTSVV FILICCFII LENIFVLLT IWKTKKFHR 
PMYYFIGNL ALSDLLAGV AYTANLLLS GATTYKLTP AQWFLREGS 
MFVALSASV FSLLAIAIE RYITMLKMK LHNGSNNFR LFLLISACW 
VISLILGGL PIMGWNCIS ALSSCSTVL PLYHKHYIL FCTTVFTLL 
LLSIVILYC RIYSLVRTR SRRLTFRKS EKSLALLKT VIIVLSVFI 
ACWAPLFIL LLLDVGCKV KTCDILFRA EYFLVLAVL NSGTNPIIY 
TLTNKEMRR AFIRI


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
8G94ALipidLysophospholipidS1P1Homo sapiens-CD69Gi1/β1/γ23.152023-04-19doi.org/10.7554/eLife.88204
8G94 (No Gprot) ALipidLysophospholipidS1P1Homo sapiens-CD693.152023-04-19doi.org/10.7554/eLife.88204
7EVYALipidLysophospholipidS1P1Homo sapiensSiponimod-Gi1/β1/γ22.982021-09-29doi.org/10.1038/s41422-021-00566-x
7EVY (No Gprot) ALipidLysophospholipidS1P1Homo sapiensSiponimod-2.982021-09-29doi.org/10.1038/s41422-021-00566-x
7EVZALipidLysophospholipidS1P1Homo sapiensCenerimod-Gi1/β1/γ23.072021-09-29doi.org/10.1038/s41422-021-00566-x
7EVZ (No Gprot) ALipidLysophospholipidS1P1Homo sapiensCenerimod-3.072021-09-29doi.org/10.1038/s41422-021-00566-x
7EW0ALipidLysophospholipidS1P1Homo sapiensOzanimod-Gi1/β1/γ23.422021-09-29doi.org/10.1038/s41422-021-00566-x
7EW0 (No Gprot) ALipidLysophospholipidS1P1Homo sapiensOzanimod-3.422021-09-29doi.org/10.1038/s41422-021-00566-x
7EW7ALipidLysophospholipidS1P1Homo sapiensSEW2871-Gi1/β1/γ23.272021-09-29doi.org/10.1038/s41422-021-00566-x
7EW7 (No Gprot) ALipidLysophospholipidS1P1Homo sapiensSEW2871-3.272021-09-29doi.org/10.1038/s41422-021-00566-x
7TD3ALipidLysophospholipidS1P1Homo sapiensS1P-Gi1/β1/γ232022-02-09doi.org/10.1038/s41467-022-28417-2
7TD3 (No Gprot) ALipidLysophospholipidS1P1Homo sapiensS1P-32022-02-09doi.org/10.1038/s41467-022-28417-2
7TD4ALipidLysophospholipidS1P1Homo sapiensSiponimod-Gi1/β1/γ22.62022-02-09doi.org/10.1038/s41467-022-28417-2
7TD4 (No Gprot) ALipidLysophospholipidS1P1Homo sapiensSiponimod-2.62022-02-09doi.org/10.1038/s41467-022-28417-2
7EO2ALipidLysophospholipidS1P1Homo sapiensFTY720-P-Gi1/β1/γ22.892022-01-05doi.org/10.1038/s41589-021-00930-3
7EO2 (No Gprot) ALipidLysophospholipidS1P1Homo sapiensFTY720-P-2.892022-01-05doi.org/10.1038/s41589-021-00930-3
7EO4ALipidLysophospholipidS1P1Homo sapiensBAF312-Gi1/β1/γ22.862022-01-05doi.org/10.1038/s41589-021-00930-3
7EO4 (No Gprot) ALipidLysophospholipidS1P1Homo sapiensBAF312-2.862022-01-05doi.org/10.1038/s41589-021-00930-3
7WF7ALipidLysophospholipidS1P1Homo sapiensS1P-Gi1/β1/γ23.42022-01-05doi.org/10.1038/s41589-021-00930-3
7WF7 (No Gprot) ALipidLysophospholipidS1P1Homo sapiensS1P-3.42022-01-05doi.org/10.1038/s41589-021-00930-3
7VIEALipidLysophospholipidS1P1Homo sapiensS1P-Gi1/β1/γ22.862022-09-28doi.org/10.1073/pnas.2117716119
7VIE (No Gprot) ALipidLysophospholipidS1P1Homo sapiensS1P-2.862022-09-28doi.org/10.1073/pnas.2117716119
7VIFALipidLysophospholipidS1P1Homo sapiensS-FTY720-P-Gi1/β1/γ22.832022-09-28doi.org/10.1073/pnas.2117716119
7VIF (No Gprot) ALipidLysophospholipidS1P1Homo sapiensS-FTY720-P-2.832022-09-28doi.org/10.1073/pnas.2117716119
7VIGALipidLysophospholipidS1P1Homo sapiensCBP-307-Gi1/β1/γ22.892022-09-28doi.org/10.1073/pnas.2117716119
7VIG (No Gprot) ALipidLysophospholipidS1P1Homo sapiensCBP-307-2.892022-09-28doi.org/10.1073/pnas.2117716119
7VIHALipidLysophospholipidS1P1Homo sapiensCBP-307-Gi1/β1/γ22.982022-09-28doi.org/10.1073/pnas.2117716119
7VIH (No Gprot) ALipidLysophospholipidS1P1Homo sapiensCBP-307-2.982022-09-28doi.org/10.1073/pnas.2117716119
3V2WALipidLysophospholipidS1P1Homo sapiensPubChem 51892645--3.352012-02-15doi.org/10.1126/science.1215904
3V2YALipidLysophospholipidS1P1Homo sapiensPubChem 51892645--2.82012-02-15doi.org/10.1126/science.1215904
8YICALipidLysophospholipidS1P1Homo sapiensSAR247799-Gi1/β1/γ23.472024-12-11To be published
8YIC (No Gprot) ALipidLysophospholipidS1P1Homo sapiensSAR247799-3.472024-12-11To be published




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 7EW0_nogp.zip



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