Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:W13 17.4425410
2L:L:W14 13.5275410
3L:L:Y17 13.748500
4L:L:R20 8.34429710
5L:L:Y21 5.2525410
6R:R:L51 5.885407
7R:R:L52 5.8225457
8R:R:Y64 7.3025407
9R:R:D72 7.9175429
10R:R:F75 6.1406
11R:R:L80 5.815407
12R:R:Y99 10.145613
13R:R:M103 8.5575412
14R:R:F104 6.275405
15R:R:Y106 8.99517
16R:R:F107 10.6025416
17R:R:F112 6.914537
18R:R:S117 6.4225409
19R:R:R134 8.095669
20R:R:W147 7.382539
21R:R:R153 10.856514
22R:R:E157 9.7975414
23R:R:D177 7.618514
24R:R:L198 5.255478
25R:R:I202 5.79476
26R:R:I218 5.3525408
27R:R:V224 3.86407
28R:R:F232 6.76833615
29R:R:F236 8.2414
30R:R:F237 6.845815
31R:R:L240 9.336514
32R:R:W241 7.81613
33R:R:L249 5.98443
34R:R:N268 8.532529
35R:R:Y272 7.07143729
36R:R:F273 9.7125457
37R:R:F274 6.1575407
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:W14 R:R:L240 10.135417.08YesYes104
2L:L:Q18 L:L:Y17 19.952819.16NoYes000
3L:L:Q18 R:R:L240 21.17037.99NoYes004
4L:L:Y17 R:R:F250 32.2377.22YesNo003
5L:L:Y17 R:R:H254 28.557230.49YesNo001
6L:L:R20 R:R:L240 10.80327.29YesYes104
7L:L:R20 R:R:E157 14.97379.3YesYes104
8R:R:D177 R:R:L240 18.62174.07YesYes144
9R:R:D177 R:R:W241 11.230212.28YesYes143
10R:R:F250 R:R:L255 29.697410.96NoNo032
11R:R:L255 R:R:T27 27.0081.47NoNo024
12R:R:C251 R:R:T27 16.50468.45NoNo014
13R:R:D177 R:R:F237 35.54888.36YesYes145
14R:R:F107 R:R:F237 25.24995.36YesYes165
15R:R:F107 R:R:Y106 59.47679.28YesYes167
16R:R:F75 R:R:Y106 75.75417.22YesYes067
17R:R:F75 R:R:S265 1007.93YesNo069
18R:R:L76 R:R:S265 20.72517.51NoNo079
19R:R:L76 R:R:S38 19.1853NoNo075
20R:R:L80 R:R:S38 14.51039.01YesNo075
21R:R:H254 R:R:I258 17.04527.95NoNo014
22R:R:I258 R:R:T34 20.62064.56NoNo045
23R:R:F259 R:R:T34 18.59896.49NoNo055
24R:R:F259 R:R:V37 12.47965.24NoNo057
25R:R:D72 R:R:S265 88.80617.36YesNo099
26R:R:D72 R:R:N45 46.47016.73YesNo099
27R:R:N45 R:R:P269 45.052714.66NoNo099
28R:R:F274 R:R:P269 43.62622.89YesNo079
29R:R:F274 R:R:V47 15.73696.55YesNo076
30R:R:L51 R:R:V47 11.15764.47YesNo076
31R:R:F273 R:R:F274 25.140813.93YesYes077
32R:R:F273 R:R:L51 11.12126.09YesYes077
33R:R:E157 R:R:R153 16.6512.79YesYes144
34R:R:R153 R:R:S154 87.55225.27YesNo046
35R:R:F104 R:R:S154 86.54825.28YesNo056
36R:R:F104 R:R:W147 82.44147.02YesYes059
37R:R:N67 R:R:W147 36.82546.78NoYes399
38R:R:C143 R:R:N67 35.83512.6NoNo379
39R:R:C143 R:R:Y64 69.56664.03NoYes077
40R:R:E119 R:R:Y64 50.68612.35NoYes097
41R:R:E119 R:R:R134 43.317311.63NoYes699
42R:R:R134 R:R:S139 16.84995.27YesNo099
43R:R:I63 R:R:S139 14.078712.39NoNo079
44R:R:I63 R:R:R57 11.28025.01NoNo076
45R:R:F237 R:R:R153 22.99655.34YesYes154
46R:R:F112 R:R:W147 42.435914.03YesYes379
47R:R:C143 R:R:F112 36.32564.19NoYes377
48R:R:L51 R:R:R55 12.71587.29YesNo076
49R:R:M56 R:R:R55 14.27863.72NoNo066
50R:R:D72 R:R:N268 56.23758.08YesYes299
51R:R:N268 R:R:Y272 43.85345.81YesYes299
52R:R:V142 R:R:Y64 13.66078.83NoYes067
53R:R:F232 R:R:M103 18.36736.22YesYes152
54R:R:F232 R:R:S261 29.82467.93YesNo057
55R:R:F237 R:R:M103 10.72144.98YesYes152
56R:R:I258 R:R:R79 35.317118.79NoNo046
57R:R:M102 R:R:R79 13.651611.17NoNo046
58R:R:F232 R:R:R79 48.38274.28YesNo056
59R:R:M102 R:R:Y82 11.39834.79NoNo043
60R:R:F107 R:R:L184 34.49488.53YesNo068
61R:R:I234 R:R:L184 33.53634.28NoNo068
62R:R:I234 R:R:L230 31.70094.28NoNo065
63R:R:C188 R:R:L230 30.87414.76NoNo065
64R:R:C188 R:R:F225 25.31354.19NoNo068
65R:R:F225 R:R:L191 24.781918.27NoNo088
66R:R:L191 R:R:S117 23.88249.01NoYes089
67R:R:S117 R:R:S194 20.44796.52YesNo098
68R:R:S194 R:R:T118 12.84756.4NoNo087
69R:R:T118 R:R:V190 11.2623.17NoNo076
70R:R:T221 R:R:Y272 38.642611.24NoYes089
71R:R:R120 R:R:T221 31.39656.47NoNo098
72R:R:R120 R:R:S117 20.58425.27NoYes099
73R:R:R134 R:R:W129 22.419612YesNo095
74R:R:L198 R:R:R120 25.40893.64YesNo089
75R:R:I202 R:R:L198 13.73344.28YesYes768
76R:R:H133 R:R:W129 11.28024.23NoNo055
77R:R:L138 R:R:V142 11.01674.47NoNo046
78R:R:C188 R:R:L226 10.42613.17NoNo066
79R:R:N264 R:R:N268 11.64369.54NoYes099
80R:R:H254 R:R:Q235 14.36498.65NoNo013
81R:R:Q235 R:R:S257 23.091910.11NoNo036
82R:R:F232 R:R:S257 25.06815.28YesNo056
83R:R:C251 R:R:H252 11.0447.37NoNo011
84R:R:F232 R:R:Y106 40.886812.38YesYes157
85R:R:F75 R:R:S261 29.36586.61YesNo067
86R:R:F107 R:R:R153 53.143719.24YesYes164
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:W13 R:R:H243 45.49 1 Yes No 0 1 0 1
L:L:W14 R:R:L240 17.08 1 Yes Yes 0 4 0 1
L:L:W14 R:R:W241 6.56 1 Yes Yes 0 3 0 1
L:L:M15 R:R:R246 17.37 0 No No 0 2 0 1
L:L:Y17 R:R:L249 4.69 0 Yes Yes 0 3 0 1
L:L:Y17 R:R:F250 7.22 0 Yes No 0 3 0 1
L:L:Y17 R:R:H254 30.49 0 Yes No 0 1 0 1
L:L:Q18 R:R:L240 7.99 0 No Yes 0 4 0 1
L:L:R20 R:R:Y99 14.4 1 Yes Yes 0 3 0 1
L:L:R20 R:R:E157 9.3 1 Yes Yes 0 4 0 1
L:L:R20 R:R:D177 11.91 1 Yes Yes 0 4 0 1
L:L:R20 R:R:F236 5.34 1 Yes Yes 0 4 0 1
L:L:R20 R:R:L240 7.29 1 Yes Yes 0 4 0 1
L:L:R20 R:R:W241 4 1 Yes Yes 0 3 0 1
L:L:Y21 R:R:Y99 5.96 1 Yes Yes 0 3 0 1
L:L:Y21 R:R:P100 6.95 1 Yes No 0 4 0 1
R:R:P100 R:R:Y99 5.56 1 No Yes 4 3 1 1
R:R:M103 R:R:Y99 15.57 1 Yes Yes 2 3 2 1
R:R:E157 R:R:Y99 10.1 1 Yes Yes 4 3 1 1
R:R:F236 R:R:Y99 9.28 1 Yes Yes 4 3 1 1
R:R:F236 R:R:M103 7.46 1 Yes Yes 4 2 1 2
R:R:F237 R:R:M103 4.98 1 Yes Yes 5 2 2 2
R:R:E157 R:R:R153 12.79 1 Yes Yes 4 4 1 2
R:R:F237 R:R:R153 5.34 1 Yes Yes 5 4 2 2
R:R:E157 R:R:F237 7 1 Yes Yes 4 5 1 2
R:R:Q174 R:R:W241 8.76 0 No Yes 3 3 2 1
R:R:D177 R:R:F237 8.36 1 Yes Yes 4 5 1 2
R:R:D177 R:R:L240 4.07 1 Yes Yes 4 4 1 1
R:R:D177 R:R:W241 12.28 1 Yes Yes 4 3 1 1
R:R:F178 R:R:W241 5.01 0 No Yes 3 3 2 1
R:R:Q235 R:R:V253 5.73 0 No No 3 4 2 2
R:R:H254 R:R:Q235 8.65 0 No No 1 3 1 2
R:R:F236 R:R:F237 10.72 1 Yes Yes 4 5 1 2
R:R:F239 R:R:V244 6.55 4 No No 4 1 2 2
R:R:F239 R:R:L249 7.31 4 No Yes 4 3 2 1
R:R:L240 R:R:W241 10.25 1 Yes Yes 4 3 1 1
R:R:L249 R:R:V244 5.96 4 Yes No 3 1 1 2
R:R:L249 R:R:V253 5.96 4 Yes No 3 4 1 2
R:R:F250 R:R:L255 10.96 0 No No 3 2 1 2
R:R:H254 R:R:I258 7.95 0 No No 1 4 1 2
L:L:Y21 R:R:W158 1.93 1 Yes No 0 4 0 1
R:R:D177 R:R:S176 1.47 1 Yes No 4 3 1 2

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 8JGF_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 4
Number of Linked Nodes 232
Number of Links 267
Number of Hubs 37
Number of Links mediated by Hubs 134
Number of Communities 7
Number of Nodes involved in Communities 44
Number of Links involved in Communities 66
Path Summary
Number Of Nodes in MetaPath 87
Number Of Links MetaPath 86
Number of Shortest Paths 51288
Length Of Smallest Path 3
Average Path Length 14.508
Length of Longest Path 30
Minimum Path Strength 1.39
Average Path Strength 7.78641
Maximum Path Strength 29.5
Minimum Path Correlation 0.7
Average Path Correlation 0.921653
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 4
Average % Of Corr. Nodes 41.4911
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 44.8295
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtQ96LB2
Sequence
>8JGF_nogp_Chain_R
YKQTLSLTV LTCIVSLVG LTGNAVVLW LLGCRMRRN AFSIYILNL 
AAADFLFLS GRLIYSLLS SKILYPVMM FSYFAGLSF LSAVSTERC 
LSVLWPIWY RCHRPTHLS AVVCVLLWA LSLLRSILE WMLCQTSDF 
ITVAWLIFL CVVLCGSSL VLLIRILCG SRKIPLTRL YVTILLTVL 
VFLLCGLPF GIQFFLFLW IHVDREVLF CHVHLVSIF LSALNSSAN 
PIIYFFVGS FR


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
8JGFAOrphanOrphanMRGPRX1Homo sapiensBAM8-22-chim(NtGi1-Gs-CtGq)/β1/γ22.72024-01-1010.1038/s41467-023-40705-z
8JGF (No Gprot) AOrphanOrphanMRGPRX1Homo sapiensBAM8-22-2.72024-01-1010.1038/s41467-023-40705-z
8JGGAOrphanOrphanMRGPRX1Homo sapiensBAM8-22-Gi1/β1/γ232024-01-1010.1038/s41467-023-40705-z
8JGG (No Gprot) AOrphanOrphanMRGPRX1Homo sapiensBAM8-22-32024-01-1010.1038/s41467-023-40705-z
8JGBAOrphanOrphanMRGPRX1Homo sapiensConorfamide-Tx2-Gi1/β1/γ22.842024-01-1010.1038/s41467-023-40705-z
8JGB (No Gprot) AOrphanOrphanMRGPRX1Homo sapiensConorfamide-Tx2-2.842024-01-1010.1038/s41467-023-40705-z
8HJ5AOrphanOrphanMRGPRX1Homo sapiensPubChem 139030531-chim(NtGi1-Gs-CtGq)/β1/γ232023-05-3110.1371/journal.pbio.3001975
8HJ5 (No Gprot) AOrphanOrphanMRGPRX1Homo sapiensPubChem 139030531-32023-05-3110.1371/journal.pbio.3001975
8DWHAOrphanOrphanMRGPRX1Homo sapiensPubChem 139030531-chim(NtGi2L-Gs-CtGq)/β1/γ23.252022-11-0210.1038/s41589-022-01173-6
8DWH (No Gprot) AOrphanOrphanMRGPRX1Homo sapiensPubChem 139030531-3.252022-11-0210.1038/s41589-022-01173-6
8DWGAOrphanOrphanMRGPRX1Homo sapiensProenkephalin-AML382chim(NtGi2L-Gs-CtGq)/β1/γ22.712022-11-0210.1038/s41589-022-01173-6
8DWG (No Gprot) AOrphanOrphanMRGPRX1Homo sapiensProenkephalin-AML3822.712022-11-0210.1038/s41589-022-01173-6
8DWCAOrphanOrphanMRGPRX1Homo sapiensProenkephalin-A-chim(NtGi2L-Gs-CtGq)/β1/γ22.872022-11-0210.1038/s41589-022-01173-6
8DWC (No Gprot) AOrphanOrphanMRGPRX1Homo sapiensProenkephalin-A-2.872022-11-0210.1038/s41589-022-01173-6




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 8JGF_nogp.zip



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