Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:?1 10.3862810
2L:L:Y2 6.405440
3R:R:N44 5.5525419
4R:R:V47 6.93439
5R:R:I62 3.8825407
6R:R:D71 5.38419
7R:R:F74 8.094507
8R:R:W91 6.21729
9R:R:F93 4.295627
10R:R:W95 7.025404
11R:R:V105 4.825446
12R:R:I107 3.3825415
13R:R:F110 6.7617
14R:R:F114 4.942516
15R:R:I116 6.955418
16R:R:R123 6.765419
17R:R:T157 7.165417
18R:R:F161 7.5675414
19R:R:F163 8.56405
20R:R:T177 3.3875403
21R:R:F178 5.93504
22R:R:N179 3.98403
23R:R:I195 3.61401
24R:R:R201 6.155415
25R:R:R205 8.594515
26R:R:F210 8.895409
27R:R:Y221 6.05333618
28R:R:K227 4.1175405
29R:R:R238 3.3625407
30R:R:W254 6.21819
31R:R:F255 6.725406
32R:R:F257 5.228517
33R:R:Q258 8.42418
34R:R:W267 8.936583
35R:R:I280 3.772584
36R:R:F292 6.6825407
37R:R:N294 7.484519
38R:R:Y302 5.17571719
39R:R:F309 8.4325438
40R:R:S316 4.98455
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:?1 R:R:R201 59.536113.22YesYes105
2R:R:F178 R:R:R201 70.74624.28YesYes045
3L:L:I4 R:R:F178 33.64948.79NoYes004
4L:L:?1 R:R:L109 45.16716.28YesNo008
5R:R:F74 R:R:L109 44.24449.74YesNo078
6R:R:F74 R:R:V105 19.15877.87YesYes076
7R:R:F292 R:R:F74 21.30212.86YesYes077
8L:L:I4 R:R:T177 30.41683.04NoYes003
9R:R:F178 R:R:M197 23.33324.98YesNo041
10R:R:L198 R:R:M197 17.892.83NoNo041
11R:R:L198 R:R:L268 14.63494.15NoNo043
12L:L:L7 R:R:T177 10.14964.42NoYes003
13R:R:G202 R:R:R205 15.94533NoYes045
14R:R:G202 R:R:T265 14.06793.64NoNo044
15R:R:L262 R:R:T265 12.26094.42NoNo054
16R:R:L262 R:R:V266 37.46522.98NoNo054
17R:R:V266 R:R:W267 36.05877.36NoYes043
18R:R:I280 R:R:W267 27.58474.7YesYes843
19R:R:I279 R:R:I280 23.10262.94NoYes034
20R:R:I279 R:R:L283 21.48462.85NoNo036
21R:R:L283 R:R:P286 19.86031.64NoNo066
22L:L:?1 R:R:Q258 12.09433.62YesYes108
23R:R:F210 R:R:Q258 43.501117.57YesYes098
24R:R:F206 R:R:F210 29.50055.36NoYes069
25R:R:F206 R:R:L262 26.713212.18NoNo065
26R:R:F292 R:R:L33 12.65186.09YesNo077
27R:R:F292 R:R:L78 10.38033.65YesNo078
28L:L:?1 R:R:W254 1005.16YesYes109
29R:R:F250 R:R:W254 67.215614.03NoYes199
30R:R:F250 R:R:I116 66.96257.54NoYes198
31R:R:I116 R:R:Y302 66.30579.67YesYes189
32R:R:L67 R:R:Y302 18.11753.52NoYes199
33R:R:D71 R:R:L67 14.87524.07YesNo199
34R:R:D71 R:R:N44 11.61386.73YesYes199
35R:R:N294 R:R:W254 68.41387.91YesYes199
36R:R:N294 R:R:N298 68.00699.54YesNo199
37R:R:N298 R:R:Y302 67.66413.49NoYes199
38R:R:R123 R:R:Y302 56.30036.17YesYes199
39R:R:R123 R:R:Y64 61.52245.14YesNo098
40R:R:V303 R:R:Y64 33.70397.57NoNo078
41R:R:F309 R:R:V303 22.51317.87YesNo387
42R:R:F309 R:R:V50 17.93489.18YesNo087
43R:R:L313 R:R:V50 13.11952.98NoNo067
44R:R:T60 R:R:Y64 28.93678.74NoNo078
45R:R:T58 R:R:T60 27.37644.71NoNo077
46R:R:T58 R:R:T61 24.23677.85NoNo077
47R:R:A51 R:R:T61 22.65721.68NoNo077
48R:R:A51 R:R:G52 21.07131.95NoNo074
49R:R:G52 R:R:R57 17.88043NoNo046
50R:R:I62 R:R:R57 14.66385.01YesNo076
51R:R:C63 R:R:I119 10.86094.91NoNo079
52R:R:I107 R:R:T157 10.03114.56YesYes157
53R:R:I107 R:R:W150 10.91532.35YesNo059
54R:R:I146 R:R:W150 10.27462.35NoNo079
55R:R:T77 R:R:V105 16.81673.17NoYes076
56R:R:I101 R:R:T77 15.79477.6NoNo057
57R:R:F178 R:R:L164 20.00777.31YesNo045
58R:R:H102 R:R:L164 18.7875.14NoNo065
59R:R:C98 R:R:H102 17.78755.9NoNo096
60R:R:C98 R:R:W91 11.097911.75NoYes299
61R:R:F93 R:R:W91 11.35427.02YesYes279
62R:R:T177 R:R:V167 18.7553.17YesNo031
63R:R:N179 R:R:V167 17.53764.43YesNo031
64L:L:?1 R:R:F110 20.036516.57YesYes107
65R:R:Y221 R:R:Y302 43.4375.96YesYes189
66R:R:A120 R:R:Y221 33.57254NoYes098
67R:R:A120 R:R:C220 31.95463.61NoNo097
68R:R:C124 R:R:C220 28.69967.28NoNo087
69R:R:C124 R:R:L128 23.67923.17NoNo787
70R:R:K227 R:R:L128 22.1032.82YesNo057
71R:R:K227 R:R:P130 13.72833.35YesNo058
72R:R:H129 R:R:P130 12.03991.53NoNo068
73R:R:N179 R:R:R190 10.67822.41YesNo035
74R:R:I195 R:R:L268 12.73834.28YesNo013
75R:R:L243 R:R:Y221 11.902110.55NoYes088
76R:R:A225 R:R:L243 10.33221.58NoNo058
77R:R:V246 R:R:Y302 27.51423.79NoYes089
78R:R:V242 R:R:V246 22.83661.6NoNo088
79R:R:R238 R:R:V242 19.63283.92YesNo078
80R:R:R238 R:R:R310 13.14845.33YesNo078
81R:R:Q307 R:R:R310 11.63624.67NoNo058
82R:R:R201 R:R:R205 10.35793.2YesYes155
83R:R:Q258 R:R:W254 32.59545.48YesYes189
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:?1 R:R:D106 7.38 1 Yes No 0 5 0 1
L:L:?1 R:R:L109 6.28 1 Yes No 0 8 0 1
L:L:?1 R:R:F110 16.57 1 Yes Yes 0 7 0 1
L:L:?1 R:R:R201 13.22 1 Yes Yes 0 5 0 1
L:L:?1 R:R:R205 24.23 1 Yes Yes 0 5 0 1
L:L:?1 R:R:W254 5.16 1 Yes Yes 0 9 0 1
L:L:?1 R:R:F257 6.63 1 Yes Yes 0 7 0 1
L:L:?1 R:R:Q258 3.62 1 Yes Yes 0 8 0 1
L:L:Y2 R:R:L81 14.07 4 Yes No 0 6 0 1
L:L:Y2 R:R:V105 3.79 4 Yes Yes 0 6 0 1
L:L:Y2 R:R:F292 4.13 4 Yes Yes 0 7 0 1
L:L:F3 R:R:V284 9.18 0 No No 0 5 0 1
L:L:I4 R:R:T177 3.04 0 No Yes 0 3 0 1
L:L:I4 R:R:F178 8.79 0 No Yes 0 4 0 1
L:L:I6 R:R:L198 7.14 0 No No 0 4 0 1
L:L:I6 R:R:L272 7.14 0 No No 0 3 0 1
L:L:L7 R:R:Y175 9.38 0 No No 0 3 0 1
L:L:L7 R:R:T177 4.42 0 No Yes 0 3 0 1
R:R:F292 R:R:L33 6.09 0 Yes No 7 7 1 2
R:R:F74 R:R:V105 7.87 0 Yes Yes 7 6 2 1
R:R:F74 R:R:L109 9.74 0 Yes No 7 8 2 1
R:R:F292 R:R:F74 12.86 0 Yes Yes 7 7 1 2
R:R:T77 R:R:V105 3.17 0 No Yes 7 6 2 1
R:R:F292 R:R:L78 3.65 0 Yes No 7 8 1 2
R:R:L81 R:R:V105 4.47 4 No Yes 6 6 1 1
R:R:K90 R:R:Y175 9.55 0 No No 4 3 2 1
R:R:D106 R:R:F110 8.36 1 No Yes 5 7 1 1
R:R:D106 R:R:T157 11.56 1 No Yes 5 7 1 2
R:R:F110 R:R:F114 7.5 1 Yes Yes 7 6 1 2
R:R:F110 R:R:L156 4.87 1 Yes No 7 5 1 2
R:R:V113 R:R:W254 3.68 0 No Yes 7 9 2 1
R:R:T157 R:R:V160 4.76 1 Yes No 7 4 2 2
R:R:R201 R:R:V160 3.92 1 Yes No 5 4 1 2
R:R:F178 R:R:L164 7.31 0 Yes No 4 5 1 2
R:R:T177 R:R:V167 3.17 0 Yes No 3 1 1 2
R:R:F178 R:R:F180 4.29 0 Yes No 4 6 1 2
R:R:F178 R:R:M197 4.98 0 Yes No 4 1 1 2
R:R:F178 R:R:R201 4.28 0 Yes Yes 4 5 1 1
R:R:L198 R:R:L268 4.15 0 No No 4 3 1 2
R:R:R201 R:R:R205 3.2 1 Yes Yes 5 5 1 1
R:R:G202 R:R:R205 3 0 No Yes 4 5 2 1
R:R:Q258 R:R:R205 7.01 1 Yes Yes 8 5 1 1
R:R:A261 R:R:R205 5.53 0 No Yes 5 5 2 1
R:R:F210 R:R:Q258 17.57 0 Yes Yes 9 8 2 1
R:R:F250 R:R:W254 14.03 1 No Yes 9 9 2 1
R:R:F250 R:R:N294 4.83 1 No Yes 9 9 2 2
R:R:C253 R:R:W254 5.22 1 No Yes 8 9 2 1
R:R:C253 R:R:N294 11.02 1 No Yes 8 9 2 2
R:R:F257 R:R:W254 3.01 1 Yes Yes 7 9 1 1
R:R:Q258 R:R:W254 5.48 1 Yes Yes 8 9 1 1
R:R:A291 R:R:W254 5.19 0 No Yes 8 9 2 1
R:R:N294 R:R:W254 7.91 1 Yes Yes 9 9 2 1
R:R:F257 R:R:T287 9.08 1 Yes No 7 7 1 2
R:R:F257 R:R:S288 5.28 1 Yes No 7 6 1 2
R:R:L268 R:R:L272 5.54 0 No No 3 3 2 1
L:L:N5 R:R:T177 2.92 0 No Yes 0 3 0 1
R:R:L198 R:R:M197 2.83 0 No No 4 1 1 2
L:L:F3 R:R:F257 2.14 0 No Yes 0 7 0 1
R:R:F110 R:R:G111 1.51 1 Yes No 7 7 1 2
R:R:F114 R:R:G111 1.51 1 Yes No 6 7 2 2
R:R:A153 R:R:F110 1.39 1 No Yes 8 7 2 1
R:R:A153 R:R:F114 1.39 1 No Yes 8 6 2 2

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 7WVW_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 2.98
Number of Linked Nodes 292
Number of Links 333
Number of Hubs 40
Number of Links mediated by Hubs 158
Number of Communities 8
Number of Nodes involved in Communities 53
Number of Links involved in Communities 71
Path Summary
Number Of Nodes in MetaPath 84
Number Of Links MetaPath 83
Number of Shortest Paths 74944
Length Of Smallest Path 3
Average Path Length 13.9139
Length of Longest Path 34
Minimum Path Strength 1.385
Average Path Strength 6.17167
Maximum Path Strength 20.4
Minimum Path Correlation 0.7
Average Path Correlation 0.933335
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 3.7037
Average % Of Corr. Nodes 49.9127
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 43.5432
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process• fibroblast proliferation   • cell population proliferation   • cellular process   • cellular response to nitrogen compound   • cellular response to stimulus   • response to dopamine   • regulation of cellular process   • response to stimulus   • signaling   • cellular response to dopamine   • response to monoamine   • cell communication   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • signal transduction   • regulation of biological process   • G protein-coupled dopamine receptor signaling pathway   • biological regulation   • response to oxygen-containing compound   • response to nitrogen compound   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cellular response to oxygen-containing compound   • cellular response to chemical stimulus   • cellular response to monoamine stimulus   • response to chemical   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • response to ketone   • response to prostaglandin   • response to lipid   • response to endogenous stimulus   • response to alcohol   • cellular response to prostaglandin stimulus   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to alcohol   • response to hormone   • cellular response to lipid   • response to prostaglandin E   • cellular response to ketone   • cellular response to hormone stimulus   • cellular anatomical structure   • membrane   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • plasma membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cell periphery   • cytoplasmic side of plasma membrane   • GTPase complex
Gene OntologyCellular Component• cellular anatomical structure   • membrane   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • plasma membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cell periphery   • cytoplasmic side of plasma membrane   • GTPase complex   • extrinsic component of membrane   • extrinsic component of cytoplasmic side of plasma membrane   • extracellular exosome   • membrane-bounded organelle   • extracellular vesicle   • extracellular organelle   • extracellular region   • organelle   • extracellular space   • vesicle   • extracellular membrane-bounded organelle   • synapse   • cell junction   • protein binding   • binding   • enzyme binding   • GTPase binding   • protein-containing complex binding   • pyrophosphatase activity   • GTPase activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • signaling receptor complex adaptor activity   • protein-macromolecule adaptor activity   • molecular adaptor activity   • signaling adaptor activity   • multicellular organismal process   • system process   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of taste   • developmental process   • sensory organ development   • eye development   • animal organ development   • retina development in camera-type eye   • visual system development   • multicellular organism development   • camera-type eye development   • anatomical structure development   • sensory system development   • system development   • cell population proliferation   • cellular process   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • signal transduction   • cell communication   • response to ketone   • response to prostaglandin   • response to lipid   • response to endogenous stimulus   • response to alcohol   • cellular response to prostaglandin stimulus   • response to oxygen-containing compound   • cellular response to oxygen-containing compound   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to chemical stimulus   • cellular response to alcohol   • response to hormone   • response to chemical   • cellular response to lipid   • response to prostaglandin E   • cellular response to ketone   • cellular response to hormone stimulus   • small GTPase-mediated signal transduction   • Ras protein signal transduction   • intracellular signal transduction   • intracellular signaling cassette   • phospholipase C-activating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular response to nitrogen compound   • response to dopamine   • cellular response to dopamine   • response to monoamine   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • G protein-coupled dopamine receptor signaling pathway   • response to nitrogen compound   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cellular response to monoamine stimulus   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • synaptic signaling   • cellular response to acetylcholine   • cell-cell signaling   • acetylcholine receptor signaling pathway   • postsynaptic signal transduction   • G protein-coupled acetylcholine receptor signaling pathway   • response to acetylcholine   • non-motile cilium   • 9+0 non-motile cilium   • cilium   • neuron projection   • photoreceptor disc membrane   • photoreceptor outer segment   • plasma membrane bounded cell projection   • cell projection   • photoreceptor cell cilium   • organelle membrane   • intracellular anatomical structure   • cytoplasm   • cytosol   • vacuolar membrane   • lytic vacuole   • vacuole   • intracellular membrane-bounded organelle   • intracellular organelle   • lytic vacuole membrane   • bounding membrane of organelle   • lysosomal membrane   • lysosome   • guanyl nucleotide binding   • GTP binding   • nucleotide binding   • guanyl ribonucleotide binding   • purine ribonucleotide binding   • purine ribonucleoside triphosphate binding   • nucleoside phosphate binding   • ion binding   • purine nucleotide binding   • anion binding   • heterocyclic compound binding   • carbohydrate derivative binding   • ribonucleotide binding   • small molecule binding   • G-protein beta/gamma-subunit complex binding   • signaling receptor binding   • G protein-coupled receptor binding   • cation binding   • metal ion binding   • positive regulation of cell population proliferation   • positive regulation of biological process   • positive regulation of neural precursor cell proliferation   • regulation of cell population proliferation   • neural precursor cell proliferation   • positive regulation of cellular process   • regulation of neural precursor cell proliferation   • reactive oxygen species metabolic process   • regulation of superoxide metabolic process   • positive regulation of reactive oxygen species metabolic process   • superoxide metabolic process   • positive regulation of metabolic process   • superoxide anion generation   • metabolic process   • positive regulation of superoxide anion generation   • regulation of superoxide anion generation   • regulation of metabolic process   • regulation of reactive oxygen species metabolic process   • regulation of calcium ion transport   • regulation of localization   • transport   • regulation of transport   • regulation of monoatomic ion transport   • establishment of localization   • metal ion transport   • calcium ion transport   • localization   • monoatomic ion transport   • regulation of metal ion transport   • monoatomic cation transport   • positive regulation of cell communication   • positive regulation of signal transduction   • regulation of signal transduction   • positive regulation of response to stimulus   • positive regulation of ERK1 and ERK2 cascade   • regulation of intracellular signal transduction   • regulation of signaling   • positive regulation of MAPK cascade   • positive regulation of intracellular signal transduction   • regulation of MAPK cascade   • regulation of response to stimulus   • MAPK cascade   • regulation of cell communication   • ERK1 and ERK2 cascade   • regulation of ERK1 and ERK2 cascade   • positive regulation of signaling   • negative regulation of signaling   • negative regulation of biological process   • negative regulation of G protein-coupled receptor signaling pathway   • negative regulation of cell communication   • negative regulation of adenylate cyclase-activating adrenergic receptor signaling pathway   • adrenergic receptor signaling pathway   • negative regulation of cellular process   • regulation of G protein-coupled receptor signaling pathway   • adenylate cyclase-activating adrenergic receptor signaling pathway   • negative regulation of response to stimulus   • negative regulation of signal transduction   • negative regulation of adenylate cyclase-activating G protein-coupled receptor signaling pathway   • regulation of adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cell division   • regulation of body fluid levels   • renal system process   • positive regulation of urine volume   • regulation of urine volume   • regulation of biological quality   • regulation of vascular associated smooth muscle cell proliferation   • positive regulation of vascular associated smooth muscle cell proliferation   • regulation of smooth muscle cell proliferation   • smooth muscle cell proliferation   • positive regulation of smooth muscle cell proliferation   • muscle cell proliferation   • vascular associated smooth muscle cell proliferation   • gamma-aminobutyric acid signaling pathway   • purinergic nucleotide receptor signaling pathway   • cell surface receptor signaling pathway   • G protein-coupled purinergic receptor signaling pathway   • G protein-coupled adenosine receptor signaling pathway   • regulation of molecular function   • regulation of adenylate cyclase activity   • regulation of catalytic activity   • negative regulation of molecular function   • negative regulation of catalytic activity   • negative regulation of adenylate cyclase activity   • regulated exocytosis   • regulation of calcium ion-dependent exocytosis   • negative regulation of transport   • negative regulation of regulated secretory pathway   • vesicle-mediated transport   • regulation of regulated secretory pathway   • secretion by cell   • regulation of secretion by cell   • negative regulation of secretion   • negative regulation of exocytosis   • negative regulation of secretion by cell   • calcium-ion regulated exocytosis   • secretion   • negative regulation of calcium ion-dependent exocytosis   • export from cell   • regulation of vesicle-mediated transport   • regulation of secretion   • exocytosis   • regulation of exocytosis   • regulation of programmed cell death   • negative regulation of apoptotic signaling pathway   • negative regulation of programmed cell death   • regulation of apoptotic process   • cell death   • apoptotic signaling pathway   • negative regulation of apoptotic process   • apoptotic process   • programmed cell death   • regulation of apoptotic signaling pathway   • positive regulation of locomotion   • regulation of cell motility   • positive regulation of cell migration   • regulation of locomotion   • positive regulation of cell motility   • regulation of cell migration   • cell migration   • cell motility   • locomotion   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • trans-synaptic signaling   • modulation of chemical synaptic transmission   • negative regulation of synaptic transmission   • chemical synaptic transmission   • regulation of trans-synaptic signaling   • anterograde trans-synaptic signaling   • response to nutrient levels   • response to nutrient   • midbody   • dense core granule   • intracellular vesicle   • endomembrane system   • cytoplasmic vesicle   • secretory granule   • secretory vesicle   • neuronal dense core vesicle   • centrosome   • microtubule organizing center   • cytoskeleton   • membraneless organelle   • intracellular membraneless organelle   • microtubule cytoskeleton   • somatodendritic compartment   • dendrite   • dendritic tree   • nucleus   • membrane-enclosed lumen   • intracellular organelle lumen   • nucleoplasm   • organelle lumen   • nuclear lumen   • neuron to neuron synapse   • hippocampal mossy fiber to CA3 synapse   • cell body   • ciliary basal body   • tetrapyrrole binding   • heme binding   • electron transfer activity   • transition metal ion binding   • iron ion binding   • molecular transducer activity   • signaling receptor activity   • amyloid-beta binding   • peptide binding   • G protein-coupled receptor activity   • transmembrane signaling receptor activity   • complement receptor activity   • immune receptor activity   • cargo receptor activity   • RAGE receptor binding   • scavenger receptor binding   • peptide receptor activity   • N-formyl peptide receptor activity   • G protein-coupled peptide receptor activity   • electron transport chain   • generation of precursor metabolites and energy   • positive regulation of cytosolic calcium ion concentration   • immune response-regulating cell surface receptor signaling pathway   • complement receptor mediated signaling pathway   • immune response-activating signaling pathway   • immune response-regulating signaling pathway   • positive regulation of immune response   • regulation of immune system process   • positive regulation of immune system process   • immune response-activating cell surface receptor signaling pathway   • immune response   • immune system process   • regulation of immune response   • activation of immune response   • regulation of defense response   • regulation of response to external stimulus   • negative regulation of inflammatory response   • defense response   • response to external stimulus   • regulation of inflammatory response   • response to stress   • negative regulation of response to external stimulus   • regulation of response to stress   • negative regulation of defense response   • inflammatory response   • positive chemotaxis   • chemotaxis   • taxis   • import into cell   • positive regulation of cellular component organization   • regulation of cellular component organization   • cellular component organization   • positive regulation of endocytosis   • phagocytosis   • cellular component organization or biogenesis   • regulation of endocytosis   • regulation of phagocytosis   • positive regulation of phagocytosis   • positive regulation of transport   • endocytosis   • regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction   • positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction   • phosphatidylinositol 3-kinase/protein kinase B signal transduction   • calcium-mediated signaling   • defense response to bacterium   • biological process involved in interspecies interaction between organisms   • response to other organism   • response to bacterium   • response to external biotic stimulus   • response to biotic stimulus   • neuron apoptotic process   • negative regulation of neuron apoptotic process   • regulation of neuron apoptotic process   • anatomical structure morphogenesis   • odontogenesis of dentin-containing tooth   • dentinogenesis   • anatomical structure formation involved in morphogenesis   • odontogenesis   • animal organ morphogenesis   • cellular developmental process   • astrocyte differentiation   • cell development   • astrocyte activation   • glial cell development   • neurogenesis   • astrocyte development   • gliogenesis   • cell differentiation   • cell activation   • nervous system development   • central nervous system development   • glial cell differentiation   • glial cell activation   • neuroinflammatory response   • positive regulation of monocyte chemotaxis   • positive regulation of chemotaxis   • regulation of monocyte chemotaxis   • positive regulation of response to external stimulus   • myeloid leukocyte migration   • positive regulation of mononuclear cell migration   • regulation of mononuclear cell migration   • cell chemotaxis   • regulation of leukocyte chemotaxis   • regulation of leukocyte migration   • positive regulation of leukocyte migration   • positive regulation of leukocyte chemotaxis   • regulation of chemotaxis   • monocyte chemotaxis   • leukocyte migration   • mononuclear cell migration   • leukocyte chemotaxis   • cell adhesion   • positive regulation of response to biotic stimulus   • regulation of response to biotic stimulus   • innate immune response   • positive regulation of innate immune response   • regulation of innate immune response   • defense response to symbiont   • defense response to other organism   • positive regulation of defense response   • cellular response to amyloid-beta   • response to amyloid-beta   • myeloid leukocyte activation   • leukocyte activation   • macrophage activation   • leukocyte activation involved in inflammatory response   • microglial cell activation   • receptor-mediated endocytosis   • periplasmic space   • tertiary granule membrane   • tertiary granule   • cytoplasmic vesicle membrane   • vesicle membrane   • secretory granule membrane   • specific granule membrane   • specific granule   • ficolin-1-rich granule membrane   • ficolin-1-rich granule
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain   • G protein-coupled receptor-like
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain   • G protein-coupled receptor-like
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeFME
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodeFME
NameN-Formylmethionine
Synonyms
  • L-N-Formylmethionine
  • N-formyl-L-methionine
  • Formyl-methionine
  • N-Formylmethionine
  • (2S)-2-(formylamino)-4-(methylthio)butanoic acid
Identifier
FormulaC6 H11 N O3 S
Molecular Weight177.221
SMILES
PubChem439750
Formal Charge0
Total Atoms22
Total Chiral Atoms1
Total Bonds21
Total Aromatic Bonds0

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP25090
Sequence
>7WVW_nogp_Chain_R
SAGYTVLRI LPLVVLGVT FVLGVLGNG LVIWVAGFR MTRTVTTIC 
YLNLALADF SFTATLPFL IVSMAMGEK WPFGWFLCK LIHIVVDIN 
LFGSVFLIG FIALDRCIC VLHPVWAQN HRTVSLAMK VIVGPWILA 
LVLTLPVFL FLTTVTIPN GDTYCTFNF ASWGGTPEE RLKVAITML 
TARGIIRFV IGFLLPMSI VAICYGLIA AKIHKKGMI KSSRPLRVL 
TAVVASFFI CWFPFQLVA LLGTVWLKE MLFYGKYKI IDILVNPTS 
SLAFFNSCL NPMLYVFVG QDFRERLIH SL


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
6OMMAPeptideFormylpeptideFPR2-ALXHomo sapiensWKYMVX-Gi1/β1/γ23.172020-02-26doi.org/10.1038/s41467-020-14728-9
6OMM (No Gprot) APeptideFormylpeptideFPR2-ALXHomo sapiensWKYMVX-3.172020-02-26doi.org/10.1038/s41467-020-14728-9
6LW5APeptideFormylpeptideFPR2-ALXHomo sapiensWKYMVm--2.82020-03-25doi.org/10.1038/s41467-020-15009-1
7T6SAPeptideFormylpeptideFPR2-ALXHomo sapiensTC-FPR 43-Gi1/β1/γ232022-03-30doi.org/10.1038/s41467-022-28586-0
7T6S (No Gprot) APeptideFormylpeptideFPR2-ALXHomo sapiensTC-FPR 43-32022-03-30doi.org/10.1038/s41467-022-28586-0
7T6UAPeptideFormylpeptideFPR2-ALXHomo sapiensCGEN-855A-Gi1/β1/γ22.92022-03-30doi.org/10.1038/s41467-022-28586-0
7T6U (No Gprot) APeptideFormylpeptideFPR2-ALXHomo sapiensCGEN-855A-2.92022-03-30doi.org/10.1038/s41467-022-28586-0
7T6VAPeptideFormylpeptideFPR2-ALXHomo sapiensfMLFII-Gi1/β1/γ23.12022-03-30doi.org/10.1038/s41467-022-28586-0
7T6V (No Gprot) APeptideFormylpeptideFPR2-ALXHomo sapiensfMLFII-3.12022-03-30doi.org/10.1038/s41467-022-28586-0
7WVVAPeptideFormylpeptideFPR2-ALXHomo sapiensfMLFII-Gi2/β1/γ22.92022-04-13doi.org/10.1038/s41467-022-29361-x
7WVV (No Gprot) APeptideFormylpeptideFPR2-ALXHomo sapiensfMLFII-2.92022-04-13doi.org/10.1038/s41467-022-29361-x
7WVWAPeptideFormylpeptideFPR2-ALXHomo sapiensfMYFINILTL-Gi2/β1/γ23.12022-04-13doi.org/10.1038/s41467-022-29361-x
7WVW (No Gprot) APeptideFormylpeptideFPR2-ALXHomo sapiensfMYFINILTL-3.12022-04-13doi.org/10.1038/s41467-022-29361-x
7WVXAPeptideFormylpeptideFPR2-ALXHomo sapiensHumanin-Gi2/β1/γ22.82022-04-13doi.org/10.1038/s41467-022-29361-x
7WVX (No Gprot) APeptideFormylpeptideFPR2-ALXHomo sapiensHumanin-2.82022-04-13doi.org/10.1038/s41467-022-29361-x
7WVYAPeptideFormylpeptideFPR2-ALXHomo sapiensAmyloid-β42-Gi2/β1/γ232022-04-13doi.org/10.1038/s41467-022-29361-x
7WVY (No Gprot) APeptideFormylpeptideFPR2-ALXHomo sapiensAmyloid-β42-32022-04-13doi.org/10.1038/s41467-022-29361-x
8Y62APeptideFormylpeptideFPR2-ALXHomo sapiensC16:0 Ceramide-Gi1/β1/γ23.22025-02-05doi.org/10.1126/science.ado4188
8Y62 (No Gprot) APeptideFormylpeptideFPR2-ALXHomo sapiensC16:0 Ceramide-3.22025-02-05doi.org/10.1126/science.ado4188
8Y63APeptideFormylpeptideFPR2-ALXHomo sapiensC20:0 Ceramide-Gi1/β1/γ23.22025-02-05doi.org/10.1126/science.ado4188
8Y63 (No Gprot) APeptideFormylpeptideFPR2-ALXHomo sapiensC20:0 Ceramide-3.22025-02-05doi.org/10.1126/science.ado4188
9JHJAPeptideFormylpeptideFPR2-ALXHomo sapiensC18:0 Ceramide-Gi1/β1/γ23.22025-03-19doi.org/10.1126/science.ado4188
9JHJ (No Gprot) APeptideFormylpeptideFPR2-ALXHomo sapiensC18:0 Ceramide-3.22025-03-19doi.org/10.1126/science.ado4188
8ZBWAPeptideFormylpeptideFPR2-ALXHomo sapiensQuin-C1-Gi2/β1/γ22.582025-09-10doi.org/10.1038/s41401-025-01525-7
8ZBW (No Gprot) APeptideFormylpeptideFPR2-ALXHomo sapiensQuin-C1-2.582025-09-10doi.org/10.1038/s41401-025-01525-7




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