Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:?1 10.3067910
2L:L:L11 3.034500
3R:R:V32 3.1575405
4R:R:F37 5.405406
5R:R:D71 5.71479
6R:R:F74 8.5457
7R:R:E89 5.78404
8R:R:W91 11.096529
9R:R:F93 6.874507
10R:R:C98 7.3625429
11R:R:I101 7.8075425
12R:R:D106 8.9415
13R:R:F110 9.612517
14R:R:F114 5.906516
15R:R:I116 7.31408
16R:R:R123 8.0525449
17R:R:R137 9.91754107
18R:R:T157 8.3625417
19R:R:F163 9.495435
20R:R:T166 4.7475425
21R:R:I169 5.0875401
22R:R:F180 7.854536
23R:R:W183 6.12434
24R:R:R205 11.095415
25R:R:F210 10.0325409
26R:R:Y221 7.255648
27R:R:W254 7.678519
28R:R:F255 8.8025406
29R:R:F257 6.2575407
30R:R:Q258 9.005418
31R:R:F292 6.87457
32R:R:N294 6.625409
33R:R:Y302 6.035649
34R:R:F309 7.54588
35R:R:R312 5.2625495
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:?1 R:R:R201 82.166614.32YesNo105
2R:R:F178 R:R:R201 90.21678.55NoNo045
3R:R:F178 R:R:M197 34.43436.22NoNo041
4R:R:F180 R:R:M197 14.27548.71YesNo361
5L:L:L12 R:R:F180 10.47184.87NoYes006
6R:R:F178 R:R:L164 66.68277.31NoNo045
7R:R:H102 R:R:L164 65.60429NoNo065
8R:R:C98 R:R:H102 64.60284.42YesNo096
9R:R:C98 R:R:T166 42.14253.38YesYes295
10R:R:T166 R:R:W95 39.25377.28YesNo054
11R:R:K99 R:R:W95 36.451617.4NoNo074
12R:R:K99 R:R:T165 35.03616.01NoNo074
13R:R:N179 R:R:T165 33.6114.39NoNo034
14R:R:N179 R:R:V167 29.27785.91NoNo031
15L:L:L11 R:R:V167 27.80451.49YesNo001
16L:L:L11 R:R:Y175 17.26533.52YesNo003
17R:R:F163 R:R:M197 18.834.98YesNo351
18R:R:F163 R:R:W183 16.51916.04YesYes354
19R:R:G184 R:R:W183 13.64471.41NoYes034
20R:R:E189 R:R:G184 12.16668.19NoNo033
21R:R:E189 R:R:T186 10.67897.06NoNo036
22L:L:?1 R:R:W254 92.04146.2YesYes109
23R:R:N294 R:R:W254 38.00197.91YesYes099
24R:R:L297 R:R:N294 24.52584.12NoYes069
25R:R:F293 R:R:L297 21.77183.65NoNo056
26R:R:F293 R:R:T36 18.91673.89NoNo657
27R:R:T36 R:R:V32 17.56861.59NoYes075
28R:R:S289 R:R:V32 10.37076.46NoYes055
29R:R:N294 R:R:N298 36.26388.17YesNo099
30R:R:D71 R:R:N298 41.86815.39YesNo099
31R:R:D71 R:R:N44 48.90236.73YesNo799
32R:R:F72 R:R:N44 47.25086.04NoNo079
33R:R:F72 R:R:V41 43.66883.93NoNo076
34R:R:F37 R:R:V41 19.07085.24YesNo066
35R:R:F37 R:R:L78 13.39433.65YesNo068
36R:R:F292 R:R:L78 11.46363.65YesNo578
37R:R:F292 R:R:L33 15.26724.87YesNo077
38R:R:T75 R:R:V41 22.90324.76NoNo076
39R:R:F74 R:R:T75 15.35395.19YesNo077
40R:R:F292 R:R:F74 11.521415YesYes577
41R:R:F250 R:R:W254 65.907611.02NoYes099
42R:R:F250 R:R:I116 84.18397.54NoYes098
43R:R:I116 R:R:Y302 1009.67YesYes089
44R:R:R123 R:R:Y302 51.10748.23YesYes499
45R:R:R123 R:R:Y64 57.31345.14YesNo098
46R:R:V303 R:R:Y64 56.0526.31NoNo078
47R:R:V303 R:R:V47 32.619211.22NoNo879
48R:R:A68 R:R:V47 32.73953.39NoNo089
49R:R:F309 R:R:V303 22.12337.87YesNo887
50R:R:A68 R:R:I48 31.27593.25NoNo087
51R:R:I48 R:R:L69 29.79785.71NoNo076
52R:R:F309 R:R:M55 11.42033.73YesNo085
53R:R:L65 R:R:L69 28.31012.77NoNo056
54R:R:L65 R:R:R57 26.81273.64NoNo056
55R:R:G52 R:R:R57 20.7274.5NoNo046
56R:R:A51 R:R:G52 17.62641.95NoNo074
57R:R:A51 R:R:T61 16.06161.68NoNo077
58R:R:T58 R:R:T61 14.48727.85NoNo077
59R:R:T58 R:R:T60 11.30963.14NoNo077
60R:R:L67 R:R:Y302 27.74193.52NoYes099
61R:R:L115 R:R:L67 17.41944.15NoNo089
62R:R:L115 R:R:N66 15.88354.12NoNo089
63R:R:I146 R:R:N66 11.21815.66NoNo079
64R:R:D71 R:R:S112 15.25285.89YesNo099
65R:R:C98 R:R:W91 25.040914.37YesYes299
66R:R:I101 R:R:W91 16.47097.05YesYes259
67R:R:I101 R:R:T77 11.7916.08YesNo057
68L:L:?1 R:R:D106 11.39629.84YesYes105
69L:L:?1 R:R:F110 35.618719.88YesYes107
70R:R:F110 R:R:F114 17.85278.57YesYes176
71R:R:F110 R:R:L156 16.75019.74YesNo175
72R:R:Y221 R:R:Y302 47.48684.96YesYes489
73R:R:A120 R:R:Y221 22.50845.34NoYes098
74R:R:A120 R:R:C220 20.96293.61NoNo097
75R:R:C124 R:R:C220 19.40787.28NoNo087
76R:R:C124 R:R:L223 17.8434.76NoNo083
77R:R:L243 R:R:Y221 31.213310.55NoYes088
78R:R:I224 R:R:L243 26.85122.85NoNo088
79R:R:L128 R:R:L223 13.0916.92NoNo073
80R:R:H129 R:R:L128 11.48772.57NoNo067
81R:R:I208 R:R:L156 14.00585.71NoNo155
82R:R:I208 R:R:V207 12.69141.54NoNo054
83R:R:I203 R:R:V207 11.31921.54NoNo044
84L:L:?1 R:R:Q258 13.02363.62YesYes108
85R:R:F210 R:R:Q258 25.113118.74YesYes098
86R:R:F250 R:R:M214 21.48774.98NoNo096
87R:R:F210 R:R:M214 13.33177.46YesNo096
88R:R:F210 R:R:F255 23.70738.57YesYes096
89R:R:I224 R:R:I228 20.83771.47NoNo088
90R:R:I228 R:R:I234 19.28268.83NoNo084
91R:R:I234 R:R:L240 16.14354.28NoNo045
92R:R:L240 R:R:P239 14.55951.64NoNo057
93R:R:P239 R:R:R238 11.36252.88NoNo077
94R:R:F255 R:R:L259 25.36837.31YesNo065
95R:R:L259 R:R:L263 22.87434.15NoNo055
96R:R:L263 R:R:W267 20.37079.11NoNo053
97R:R:W267 R:R:Y277 15.334638.58NoNo033
98R:R:M271 R:R:Y277 10.262.39NoNo013
99R:R:I116 R:R:N298 26.58648.5YesNo089
100R:R:L67 R:R:S112 14.73284.5NoNo099
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:?1 R:R:D106 9.84 1 Yes Yes 0 5 0 1
L:L:?1 R:R:L109 6.28 1 Yes No 0 8 0 1
L:L:?1 R:R:F110 19.88 1 Yes Yes 0 7 0 1
L:L:?1 R:R:R201 14.32 1 Yes No 0 5 0 1
L:L:?1 R:R:R205 25.34 1 Yes Yes 0 5 0 1
L:L:?1 R:R:W254 6.2 1 Yes Yes 0 9 0 1
L:L:?1 R:R:F257 4.42 1 Yes Yes 0 7 0 1
L:L:?1 R:R:Q258 3.62 1 Yes Yes 0 8 0 1
L:L:P3 R:R:F257 8.67 0 No Yes 0 7 0 1
L:L:P3 R:R:V284 3.53 0 No No 0 5 0 1
L:L:R4 R:R:L268 4.86 0 No No 0 3 0 1
L:L:G5 R:R:E89 4.91 0 No Yes 0 4 0 1
L:L:F6 R:R:E89 15.16 0 No Yes 0 4 0 1
L:L:F6 R:R:Y175 7.22 0 No No 0 3 0 1
L:L:C8 R:R:L272 4.76 0 No No 0 3 0 1
L:L:L11 R:R:I169 4.28 0 Yes Yes 0 1 0 1
L:L:L11 R:R:Y175 3.52 0 Yes No 0 3 0 1
L:L:L12 R:R:F180 4.87 0 No Yes 0 6 0 1
L:L:T13 R:R:R190 5.17 0 No No 0 5 0 1
R:R:D173 R:R:K90 12.44 0 No No 3 4 2 2
R:R:K90 R:R:Y175 14.33 0 No No 4 3 2 1
R:R:D106 R:R:F110 8.36 1 Yes Yes 5 7 1 1
R:R:D106 R:R:T157 11.56 1 Yes Yes 5 7 1 2
R:R:D106 R:R:V160 5.84 1 Yes No 5 4 1 2
R:R:F110 R:R:F114 8.57 1 Yes Yes 7 6 1 2
R:R:F110 R:R:L156 9.74 1 Yes No 7 5 1 2
R:R:T157 R:R:V160 4.76 1 Yes No 7 4 2 2
R:R:F163 R:R:F180 9.65 3 Yes Yes 5 6 2 1
R:R:F163 R:R:M197 4.98 3 Yes No 5 1 2 2
R:R:N179 R:R:V167 5.91 0 No No 3 1 2 1
R:R:I169 R:R:P170 3.39 0 Yes No 1 3 1 2
R:R:I169 R:R:N171 7.08 0 Yes No 1 4 1 2
R:R:D173 R:R:I169 5.6 0 No Yes 3 1 2 1
R:R:F178 R:R:M197 6.22 0 No No 4 1 2 2
R:R:F178 R:R:R201 8.55 0 No No 4 5 2 1
R:R:A181 R:R:N179 4.69 0 No No 5 3 1 2
R:R:F180 R:R:V193 10.49 3 Yes No 6 4 1 2
R:R:A194 R:R:F180 5.55 0 No Yes 3 6 2 1
R:R:F180 R:R:M197 8.71 3 Yes No 6 1 1 2
R:R:G185 R:R:R190 4.5 0 No No 3 5 2 1
R:R:P187 R:R:R190 4.32 0 No No 5 5 2 1
R:R:L198 R:R:L268 6.92 0 No No 4 3 2 1
R:R:R201 R:R:R205 5.33 1 No Yes 5 5 1 1
R:R:Q258 R:R:R205 8.18 1 Yes Yes 8 5 1 1
R:R:A261 R:R:R205 5.53 0 No Yes 5 5 2 1
R:R:F210 R:R:Q258 18.74 0 Yes Yes 9 8 2 1
R:R:F250 R:R:W254 11.02 0 No Yes 9 9 2 1
R:R:Q258 R:R:W254 5.48 1 Yes Yes 8 9 1 1
R:R:A291 R:R:W254 7.78 0 No Yes 8 9 2 1
R:R:N294 R:R:W254 7.91 0 Yes Yes 9 9 2 1
R:R:F257 R:R:T287 7.78 0 Yes No 7 7 1 2
R:R:A291 R:R:F257 4.16 0 No Yes 8 7 2 1
R:R:L268 R:R:L272 4.15 0 No No 3 3 1 1
R:R:E89 R:R:G88 1.64 0 Yes No 4 3 1 2
L:L:E15 R:R:A181 1.51 0 No No 0 5 0 1
R:R:F110 R:R:G111 1.51 1 Yes No 7 7 1 2
R:R:F114 R:R:G111 1.51 1 Yes No 6 7 2 2
L:L:L11 R:R:V167 1.49 0 Yes No 0 1 0 1
R:R:E89 R:R:T177 1.41 0 Yes No 4 3 1 2

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 7WVX_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3.28
Number of Linked Nodes 298
Number of Links 322
Number of Hubs 35
Number of Links mediated by Hubs 131
Number of Communities 10
Number of Nodes involved in Communities 48
Number of Links involved in Communities 58
Path Summary
Number Of Nodes in MetaPath 101
Number Of Links MetaPath 100
Number of Shortest Paths 52249
Length Of Smallest Path 3
Average Path Length 15.092
Length of Longest Path 39
Minimum Path Strength 1.435
Average Path Strength 6.86157
Maximum Path Strength 26.455
Minimum Path Correlation 0.7
Average Path Correlation 0.93751
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 2.7027
Average % Of Corr. Nodes 52.8651
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 34.6949
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process• intracellular iron ion homeostasis   • inorganic ion homeostasis   • cellular homeostasis   • chemical homeostasis   • homeostatic process   • intracellular monoatomic cation homeostasis   • monoatomic ion homeostasis   • intracellular chemical homeostasis   • monoatomic cation homeostasis   • intracellular monoatomic ion homeostasis   • multicellular organismal process   • regulation of cellular process   • negative regulation of biological process   • regulation of cytokine production   • cytokine production   • negative regulation of cellular process   • regulation of multicellular organismal process   • negative regulation of macromolecule metabolic process   • regulation of biosynthetic process   • regulation of biological process   • negative regulation of metabolic process   • biological regulation   • negative regulation of cytokine production   • regulation of macromolecule metabolic process   • gene expression   • macromolecule biosynthetic process   • regulation of gene expression   • regulation of interleukin-18 production   • negative regulation of gene expression   • biosynthetic process   • negative regulation of biosynthetic process   • negative regulation of macromolecule biosynthetic process   • regulation of macromolecule biosynthetic process   • metabolic process   • cellular process   • macromolecule metabolic process   • negative regulation of interleukin-18 production   • negative regulation of multicellular organismal process   • regulation of metabolic process   • interleukin-18 production   • negative regulation of programmed cell death   • regulation of apoptotic process   • regulation of programmed cell death   • cell death   • negative regulation of apoptotic process   • apoptotic process   • programmed cell death   • cellular response to stimulus   • positive regulation of response to biotic stimulus   • pattern recognition receptor signaling pathway   • response to stimulus   • regulation of NLRP3 inflammasome complex assembly   • regulation of signal transduction   • response to biotic stimulus   • intracellular signal transduction   • cell communication   • cellular component biogenesis   • immune response-activating signaling pathway   • cellular component assembly   • inflammasome-mediated signaling pathway   • positive regulation of immune response   • canonical inflammasome complex assembly   • regulation of immune system process   • signal transduction   • negative regulation of NLRP3 inflammasome complex assembly   • positive regulation of immune system process   • innate immune response-activating signaling pathway   • negative regulation of cellular component organization   • immune response   • response to other organism   • regulation of innate immune response   • response to external stimulus   • regulation of inflammasome-mediated signaling pathway   • negative regulation of protein-containing complex assembly   • regulation of response to stimulus   • defense response to other organism   • regulation of pattern recognition receptor signaling pathway   • NLRP3 inflammasome complex assembly   • positive regulation of defense response   • activation of innate immune response   • regulation of immune response   • inflammatory response   • activation of immune response   • cytoplasmic pattern recognition receptor signaling pathway   • regulation of defense response   • regulation of response to biotic stimulus   • biological process involved in interspecies interaction between organisms   • regulation of cellular component organization   • regulation of response to external stimulus   • intracellular receptor signaling pathway   • signaling   • negative regulation of signaling   • negative regulation of cytoplasmic pattern recognition receptor signaling pathway   • negative regulation of intracellular signal transduction   • positive regulation of biological process   • regulation of cytoplasmic pattern recognition receptor signaling pathway   • negative regulation of cell communication   • positive regulation of response to stimulus   • cellular component organization   • regulation of protein-containing complex assembly   • positive regulation of response to external stimulus   • immune response-regulating signaling pathway   • regulation of intracellular signal transduction   • regulation of response to stress   • response to stress   • innate immune response   • protein-containing complex assembly   • response to external biotic stimulus   • cellular component organization or biogenesis   • regulation of signaling   • positive regulation of innate immune response   • defense response   • negative regulation of response to stimulus   • protein-containing complex organization   • defense response to symbiont   • regulation of cellular component biogenesis   • negative regulation of signal transduction   • negative regulation of immune system process   • immune system process   • regulation of cell communication   • negative regulation of inflammasome-mediated signaling pathway   • negative regulation of inflammatory response   • regulation of inflammatory response   • negative regulation of response to external stimulus   • negative regulation of defense response   • regulation of neuroinflammatory response   • negative regulation of neuroinflammatory response   • neuroinflammatory response   • cell-cell signaling   • neuron apoptotic process   • negative regulation of neuron apoptotic process   • regulation of neuron apoptotic process   • negative regulation of execution phase of apoptosis   • regulation of execution phase of apoptosis   • execution phase of apoptosis   • response to oxidative stress   • regulation of response to oxidative stress   • negative regulation of response to oxidative stress   • interleukin-1 production   • negative regulation of interleukin-1 production   • regulation of interleukin-1 production   • supramolecular fiber organization   • cell chemotaxis   • chemotaxis   • leukocyte migration   • cellular response to chemical stimulus   • taxis   • response to chemical   • cell migration   • cell motility   • leukocyte chemotaxis   • locomotion   • organelle organization   • mitochondrion organization   • cellular response to nitrogen compound   • response to oxygen-containing compound   • response to nitrogen compound   • cellular response to amyloid-beta   • cellular response to oxygen-containing compound   • response to amyloid-beta   • negative regulation of amyloid fibril formation   • regulation of amyloid fibril formation   • amyloid fibril formation   • regulation of primary metabolic process   • negative regulation of supramolecular fiber organization   • protein metabolic process   • negative regulation of protein metabolic process   • regulation of protein metabolic process   • primary metabolic process   • regulation of supramolecular fiber organization   • membrane-bounded organelle   • intracellular organelle   • cellular anatomical structure   • intracellular anatomical structure   • mitochondrion   • organelle   • cytoplasm   • intracellular membrane-bounded organelle   • cell projection   • cilium   • 9+2 motile cilium   • sperm flagellum   • motile cilium   • plasma membrane bounded cell projection
Gene OntologyCellular Component• membrane-bounded organelle   • intracellular organelle   • cellular anatomical structure   • intracellular anatomical structure   • mitochondrion   • organelle   • cytoplasm   • intracellular membrane-bounded organelle   • cell projection   • cilium   • 9+2 motile cilium   • sperm flagellum   • motile cilium   • plasma membrane bounded cell projection   • sperm midpiece   • extracellular region   • perinuclear region of cytoplasm   • extracellular space   • nucleus   • binding   • tetrapyrrole binding   • heme binding   • electron transfer activity   • cation binding   • transition metal ion binding   • iron ion binding   • ion binding   • metal ion binding   • small molecule binding   • molecular transducer activity   • signaling receptor activity   • amide binding   • amyloid-beta binding   • peptide binding   • G protein-coupled receptor activity   • transmembrane signaling receptor activity   • complement receptor activity   • immune receptor activity   • cargo receptor activity   • RAGE receptor binding   • protein binding   • signaling receptor binding   • scavenger receptor binding   • peptide receptor activity   • N-formyl peptide receptor activity   • G protein-coupled peptide receptor activity   • electron transport chain   • metabolic process   • cellular process   • generation of precursor metabolites and energy   • positive regulation of cytosolic calcium ion concentration   • biological regulation   • regulation of biological quality   • regulation of biological process   • regulation of cellular process   • reactive oxygen species metabolic process   • positive regulation of biological process   • regulation of superoxide metabolic process   • positive regulation of reactive oxygen species metabolic process   • superoxide metabolic process   • positive regulation of metabolic process   • superoxide anion generation   • positive regulation of superoxide anion generation   • regulation of superoxide anion generation   • regulation of metabolic process   • regulation of reactive oxygen species metabolic process   • positive regulation of cellular process   • cellular response to stimulus   • positive regulation of cell communication   • positive regulation of signal transduction   • response to stimulus   • signaling   • regulation of signal transduction   • intracellular signal transduction   • cell communication   • positive regulation of response to stimulus   • positive regulation of ERK1 and ERK2 cascade   • regulation of intracellular signal transduction   • intracellular signaling cassette   • signal transduction   • regulation of signaling   • positive regulation of MAPK cascade   • positive regulation of intracellular signal transduction   • regulation of MAPK cascade   • regulation of response to stimulus   • MAPK cascade   • regulation of cell communication   • ERK1 and ERK2 cascade   • regulation of ERK1 and ERK2 cascade   • positive regulation of signaling   • immune response-regulating cell surface receptor signaling pathway   • complement receptor mediated signaling pathway   • immune response-activating signaling pathway   • immune response-regulating signaling pathway   • positive regulation of immune response   • regulation of immune system process   • positive regulation of immune system process   • cell surface receptor signaling pathway   • immune response-activating cell surface receptor signaling pathway   • immune response   • immune system process   • regulation of immune response   • activation of immune response   • regulation of defense response   • regulation of response to external stimulus   • negative regulation of inflammatory response   • defense response   • negative regulation of response to stimulus   • negative regulation of biological process   • response to external stimulus   • regulation of inflammatory response   • response to stress   • negative regulation of response to external stimulus   • regulation of response to stress   • negative regulation of defense response   • inflammatory response   • positive chemotaxis   • chemotaxis   • taxis   • response to chemical   • locomotion   • regulation of localization   • import into cell   • positive regulation of cellular component organization   • regulation of cellular component organization   • transport   • vesicle-mediated transport   • cellular component organization   • localization   • positive regulation of endocytosis   • phagocytosis   • cellular component organization or biogenesis   • regulation of endocytosis   • regulation of transport   • regulation of phagocytosis   • regulation of vesicle-mediated transport   • establishment of localization   • positive regulation of phagocytosis   • positive regulation of transport   • endocytosis   • regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction   • positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction   • phosphatidylinositol 3-kinase/protein kinase B signal transduction   • calcium-mediated signaling   • defense response to bacterium   • biological process involved in interspecies interaction between organisms   • response to other organism   • response to bacterium   • response to external biotic stimulus   • response to biotic stimulus   • neuron apoptotic process   • negative regulation of neuron apoptotic process   • negative regulation of programmed cell death   • regulation of apoptotic process   • regulation of programmed cell death   • cell death   • negative regulation of apoptotic process   • negative regulation of cellular process   • apoptotic process   • programmed cell death   • regulation of neuron apoptotic process   • multicellular organismal process   • cellular developmental process   • astrocyte differentiation   • cell development   • astrocyte activation   • glial cell development   • multicellular organism development   • neurogenesis   • astrocyte development   • gliogenesis   • cell differentiation   • anatomical structure development   • system development   • developmental process   • cell activation   • nervous system development   • central nervous system development   • glial cell differentiation   • glial cell activation   • neuroinflammatory response   • positive regulation of monocyte chemotaxis   • positive regulation of locomotion   • regulation of cell motility   • positive regulation of chemotaxis   • positive regulation of cell migration   • regulation of monocyte chemotaxis   • positive regulation of response to external stimulus   • positive regulation of cell motility   • regulation of cell migration   • myeloid leukocyte migration   • positive regulation of mononuclear cell migration   • cell migration   • cell motility   • regulation of mononuclear cell migration   • cell chemotaxis   • regulation of leukocyte chemotaxis   • regulation of leukocyte migration   • positive regulation of leukocyte migration   • positive regulation of leukocyte chemotaxis   • regulation of chemotaxis   • monocyte chemotaxis   • leukocyte migration   • cellular response to chemical stimulus   • regulation of locomotion   • mononuclear cell migration   • leukocyte chemotaxis   • phospholipase C-activating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cell adhesion   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • positive regulation of response to biotic stimulus   • regulation of response to biotic stimulus   • innate immune response   • positive regulation of innate immune response   • regulation of innate immune response   • defense response to symbiont   • defense response to other organism   • positive regulation of defense response   • cellular response to nitrogen compound   • response to oxygen-containing compound   • response to nitrogen compound   • cellular response to amyloid-beta   • cellular response to oxygen-containing compound   • response to amyloid-beta   • myeloid leukocyte activation   • leukocyte activation   • macrophage activation   • leukocyte activation involved in inflammatory response   • microglial cell activation   • receptor-mediated endocytosis   • periplasmic space   • tertiary granule membrane   • membrane   • intracellular vesicle   • endomembrane system   • tertiary granule   • cytoplasmic vesicle membrane   • bounding membrane of organelle   • vesicle membrane   • cytoplasmic vesicle   • secretory granule   • secretory vesicle   • vesicle   • organelle membrane   • secretory granule membrane   • specific granule membrane   • specific granule   • cell periphery   • plasma membrane   • ficolin-1-rich granule membrane   • ficolin-1-rich granule   • guanyl nucleotide binding   • GTP binding   • nucleotide binding   • guanyl ribonucleotide binding   • purine ribonucleotide binding   • purine ribonucleoside triphosphate binding   • nucleoside phosphate binding   • purine nucleotide binding   • anion binding   • heterocyclic compound binding   • carbohydrate derivative binding   • ribonucleotide binding   • protein-containing complex binding   • G-protein beta/gamma-subunit complex binding   • G protein-coupled receptor binding   • pyrophosphatase activity   • GTPase activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • cell population proliferation   • positive regulation of cell population proliferation   • positive regulation of neural precursor cell proliferation   • regulation of cell population proliferation   • neural precursor cell proliferation   • regulation of neural precursor cell proliferation   • regulation of calcium ion transport   • regulation of monoatomic ion transport   • metal ion transport   • calcium ion transport   • monoatomic ion transport   • regulation of metal ion transport   • monoatomic cation transport   • negative regulation of signaling   • negative regulation of G protein-coupled receptor signaling pathway   • negative regulation of cell communication   • negative regulation of adenylate cyclase-activating adrenergic receptor signaling pathway   • adrenergic receptor signaling pathway   • regulation of G protein-coupled receptor signaling pathway   • adenylate cyclase-activating adrenergic receptor signaling pathway   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • negative regulation of signal transduction   • negative regulation of adenylate cyclase-activating G protein-coupled receptor signaling pathway   • regulation of adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cell division   • regulation of body fluid levels   • renal system process   • system process   • positive regulation of urine volume   • regulation of urine volume   • regulation of vascular associated smooth muscle cell proliferation   • positive regulation of vascular associated smooth muscle cell proliferation   • regulation of smooth muscle cell proliferation   • smooth muscle cell proliferation   • positive regulation of smooth muscle cell proliferation   • muscle cell proliferation   • vascular associated smooth muscle cell proliferation   • cell-cell signaling   • gamma-aminobutyric acid signaling pathway   • purinergic nucleotide receptor signaling pathway   • G protein-coupled purinergic receptor signaling pathway   • G protein-coupled adenosine receptor signaling pathway   • regulation of molecular function   • regulation of adenylate cyclase activity   • regulation of catalytic activity   • negative regulation of molecular function   • negative regulation of catalytic activity   • negative regulation of adenylate cyclase activity   • regulated exocytosis   • regulation of calcium ion-dependent exocytosis   • negative regulation of transport   • negative regulation of regulated secretory pathway   • regulation of regulated secretory pathway   • secretion by cell   • regulation of secretion by cell   • negative regulation of secretion   • negative regulation of exocytosis   • negative regulation of secretion by cell   • calcium-ion regulated exocytosis   • secretion   • negative regulation of calcium ion-dependent exocytosis   • export from cell   • regulation of secretion   • exocytosis   • regulation of exocytosis   • negative regulation of apoptotic signaling pathway   • apoptotic signaling pathway   • regulation of apoptotic signaling pathway   • trans-synaptic signaling   • modulation of chemical synaptic transmission   • negative regulation of synaptic transmission   • chemical synaptic transmission   • synaptic signaling   • regulation of trans-synaptic signaling   • anterograde trans-synaptic signaling   • cellular response to acetylcholine   • acetylcholine receptor signaling pathway   • postsynaptic signal transduction   • G protein-coupled acetylcholine receptor signaling pathway   • response to acetylcholine   • response to nutrient levels   • response to nutrient   • midbody   • dense core granule   • neuronal dense core vesicle   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cytoplasmic side of plasma membrane   • GTPase complex   • extrinsic component of membrane   • extrinsic component of cytoplasmic side of plasma membrane   • extracellular exosome   • extracellular vesicle   • extracellular organelle   • extracellular membrane-bounded organelle   • centrosome   • microtubule organizing center   • cytoskeleton   • membraneless organelle   • intracellular membraneless organelle   • microtubule cytoskeleton   • cytosol   • somatodendritic compartment   • dendrite   • dendritic tree   • neuron projection   • membrane-enclosed lumen   • intracellular organelle lumen   • nucleoplasm   • organelle lumen   • nuclear lumen   • neuron to neuron synapse   • synapse   • cell junction   • hippocampal mossy fiber to CA3 synapse   • cell body   • ciliary basal body   • enzyme binding   • GTPase binding   • signaling receptor complex adaptor activity   • protein-macromolecule adaptor activity   • molecular adaptor activity   • signaling adaptor activity   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of taste   • sensory organ development   • eye development   • animal organ development   • retina development in camera-type eye   • visual system development   • camera-type eye development   • sensory system development   • response to ketone   • response to prostaglandin   • response to lipid   • response to endogenous stimulus   • response to alcohol   • cellular response to prostaglandin stimulus   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to alcohol   • response to hormone   • cellular response to lipid   • response to prostaglandin E   • cellular response to ketone   • cellular response to hormone stimulus   • small GTPase-mediated signal transduction   • Ras protein signal transduction   • response to dopamine   • cellular response to dopamine   • response to monoamine   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • G protein-coupled dopamine receptor signaling pathway   • cellular response to monoamine stimulus   • non-motile cilium   • 9+0 non-motile cilium   • photoreceptor disc membrane   • photoreceptor outer segment   • photoreceptor cell cilium   • vacuolar membrane   • lytic vacuole   • vacuole   • lytic vacuole membrane   • lysosomal membrane   • lysosome   • G-protein beta-subunit binding   • fibroblast proliferation
SCOP2Domain Identifier• G protein-coupled receptor-like   • Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• G protein-coupled receptor-like   • Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeFME
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodeFME
NameN-Formylmethionine
Synonyms
  • Formyl-methionine
  • N-Formylmethionine
  • N-formyl-L-methionine
  • (2S)-2-(formylamino)-4-(methylthio)butanoic acid
  • L-N-Formylmethionine
Identifier
FormulaC6 H11 N O3 S
Molecular Weight177.221
SMILES
PubChem439750
Formal Charge0
Total Atoms22
Total Chiral Atoms1
Total Bonds21
Total Aromatic Bonds0

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP25090
Sequence
>7WVX_nogp_Chain_R
SAGYTVLRI LPLVVLGVT FVLGVLGNG LVIWVAGFR MTRTVTTIC 
YLNLALADF SFTATLPFL IVSMAMGEK WPFGWFLCK LIHIVVDIN 
LFGSVFLIG FIALDRCIC VLHPVWAQN HRTVSLAMK VIVGPWILA 
LVLTLPVFL FLTTVTIPN GDTYCTFNF ASWGGTPEE RLKVAITML 
TARGIIRFV IGFLLPMSI VAICYGLIA AKIHKKGMI KSSRPLRVL 
TAVVASFFI CWFPFQLVA LLGTVWLKE MLFYGKYKI IDILVNPTS 
SLAFFNSCL NPMLYVFVG QDFRERLIH SL


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
6OMMAPeptideFormylpeptideFPR2-ALXHomo sapiensWKYMVX-Gi1/β1/γ23.172020-02-26doi.org/10.1038/s41467-020-14728-9
6OMM (No Gprot) APeptideFormylpeptideFPR2-ALXHomo sapiensWKYMVX-3.172020-02-26doi.org/10.1038/s41467-020-14728-9
6LW5APeptideFormylpeptideFPR2-ALXHomo sapiensWKYMVm--2.82020-03-25doi.org/10.1038/s41467-020-15009-1
7T6SAPeptideFormylpeptideFPR2-ALXHomo sapiensPubChem 24776341-Gi1/β1/γ232022-03-30doi.org/10.1038/s41467-022-28586-0
7T6S (No Gprot) APeptideFormylpeptideFPR2-ALXHomo sapiensPubChem 24776341-32022-03-30doi.org/10.1038/s41467-022-28586-0
7T6UAPeptideFormylpeptideFPR2-ALXHomo sapiensCGEN-855A-Gi1/β1/γ22.92022-03-30doi.org/10.1038/s41467-022-28586-0
7T6U (No Gprot) APeptideFormylpeptideFPR2-ALXHomo sapiensCGEN-855A-2.92022-03-30doi.org/10.1038/s41467-022-28586-0
7T6VAPeptideFormylpeptideFPR2-ALXHomo sapiensfMLFII-Gi1/β1/γ23.12022-03-30doi.org/10.1038/s41467-022-28586-0
7T6V (No Gprot) APeptideFormylpeptideFPR2-ALXHomo sapiensfMLFII-3.12022-03-30doi.org/10.1038/s41467-022-28586-0
7WVVAPeptideFormylpeptideFPR2-ALXHomo sapiensfMLFII-Gi2/β1/γ22.92022-04-13doi.org/10.1038/s41467-022-29361-x
7WVV (No Gprot) APeptideFormylpeptideFPR2-ALXHomo sapiensfMLFII-2.92022-04-13doi.org/10.1038/s41467-022-29361-x
7WVWAPeptideFormylpeptideFPR2-ALXHomo sapiensfMYFINILTL-Gi2/β1/γ23.12022-04-13doi.org/10.1038/s41467-022-29361-x
7WVW (No Gprot) APeptideFormylpeptideFPR2-ALXHomo sapiensfMYFINILTL-3.12022-04-13doi.org/10.1038/s41467-022-29361-x
7WVXAPeptideFormylpeptideFPR2-ALXHomo sapiensHumanin-Gi2/β1/γ22.82022-04-13doi.org/10.1038/s41467-022-29361-x
7WVX (No Gprot) APeptideFormylpeptideFPR2-ALXHomo sapiensHumanin-2.82022-04-13doi.org/10.1038/s41467-022-29361-x
7WVYAPeptideFormylpeptideFPR2-ALXHomo sapiensAmyloid-β42-Gi2/β1/γ232022-04-13doi.org/10.1038/s41467-022-29361-x
7WVY (No Gprot) APeptideFormylpeptideFPR2-ALXHomo sapiensAmyloid-β42-32022-04-13doi.org/10.1038/s41467-022-29361-x
8Y62APeptideFormylpeptideFPR2-ALXHomo sapiensC16:0 Ceramide-Gi1/β1/γ23.22025-02-05doi.org/10.1126/science.ado4188
8Y62 (No Gprot) APeptideFormylpeptideFPR2-ALXHomo sapiensC16:0 Ceramide-3.22025-02-05doi.org/10.1126/science.ado4188
8Y63APeptideFormylpeptideFPR2-ALXHomo sapiensC20:0 Ceramide-Gi1/β1/γ23.22025-02-05doi.org/10.1126/science.ado4188
8Y63 (No Gprot) APeptideFormylpeptideFPR2-ALXHomo sapiensC20:0 Ceramide-3.22025-02-05doi.org/10.1126/science.ado4188
9JHJAPeptideFormylpeptideFPR2-ALXHomo sapiensC18:0 Ceramide-Gi1/β1/γ23.22025-03-19doi.org/10.1126/science.ado4188
9JHJ (No Gprot) APeptideFormylpeptideFPR2-ALXHomo sapiensC18:0 Ceramide-3.22025-03-19doi.org/10.1126/science.ado4188




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