Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:?1 13.1143720
2R:R:C574 3.195408
3R:R:L581 5.9175409
4R:R:F588 3.915417
5R:R:R601 9.4075418
6R:R:Y602 9.60857718
7R:R:I604 6.035439
8R:R:H640 6.04509
9R:R:Y641 8.17407
10R:R:F643 7.485428
11R:R:F647 9.8225429
12R:R:W649 10.4639
13R:R:H656 8.1625408
14R:R:W680 7.382508
15R:R:S697 2.918557
16R:R:Y698 10.7683609
17R:R:F716 11.965429
18R:R:L731 3.9175448
19R:R:L769 5.555449
20R:R:W773 11.906529
21R:R:F803 6.836519
22R:R:C807 6.595418
23R:R:E812 8.9275418
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:?1 R:R:F716 60.558322.56YesYes209
2R:R:F647 R:R:F716 38.267510.72YesYes299
3R:R:F647 R:R:M650 39.28074.98YesNo099
4R:R:M650 R:R:Q798 36.69064.08NoNo099
5R:R:Q798 R:R:V612 35.37545.73NoNo098
6R:R:Q616 R:R:V612 21.48564.3NoNo088
7R:R:C574 R:R:Q616 18.54664.58YesNo088
8R:R:L581 R:R:V612 14.24555.96YesNo098
9L:L:?1 R:R:H640 83.65435.18YesYes009
10R:R:C687 R:R:H640 99.51694.42NoYes089
11R:R:C687 R:R:Y641 99.61754.03NoYes087
12R:R:W680 R:R:Y641 99.91958.68YesYes087
13R:R:W649 R:R:W680 10014.99YesYes098
14R:R:I604 R:R:W649 95.34325.87YesYes399
15R:R:E653 R:R:I604 97.61126.83NoYes099
16R:R:E653 R:R:H605 78.017812.31NoNo099
17R:R:H605 R:R:R601 89.80074.51NoYes098
18R:R:R601 R:R:Y602 81.67488.23YesYes188
19R:R:F588 R:R:Y602 61.85336.19YesYes178
20R:R:F588 R:R:T584 28.75263.89YesNo179
21R:R:F803 R:R:T584 27.24956.49YesNo199
22R:R:C580 R:R:F803 35.53655.59NoYes079
23R:R:C807 R:R:F588 30.3634.19YesYes187
24R:R:C807 R:R:F803 27.36366.98YesYes189
25R:R:I597 R:R:Y602 26.061916.92NoYes088
26R:R:A816 R:R:I597 24.39113.25NoNo088
27R:R:A816 R:R:V594 15.83575.09NoNo088
28R:R:K820 R:R:V594 14.0713.04NoNo088
29R:R:H656 R:R:I604 13.31955.3YesYes089
30R:R:H605 R:R:H806 14.809111.94NoNo099
31R:R:E653 R:R:I768 45.896813.66NoNo098
32R:R:H806 R:R:I768 14.540715.91NoNo098
33L:L:?1 R:R:W705 22.894732.1YesNo009
34R:R:N703 R:R:W705 21.445325.99NoNo079
35R:R:N703 R:R:T700 18.50632.92NoNo074
36R:R:H640 R:R:Y698 20.291210.89YesYes099
37L:L:?1 R:R:L706 17.1715.57YesNo009
38R:R:L706 R:R:Y698 13.185319.93NoYes099
39R:R:H640 R:R:L644 20.22413.86YesNo099
40R:R:I686 R:R:L644 15.8295.71NoNo079
41R:R:F682 R:R:I686 14.30587.54NoNo047
42R:R:I768 R:R:L769 56.76714.28NoYes089
43R:R:L765 R:R:L769 29.40358.3NoYes499
44R:R:L657 R:R:L765 28.8135.54NoNo099
45R:R:L657 R:R:V734 23.44495.96NoNo099
46R:R:V661 R:R:V734 17.9836.41NoNo099
47R:R:I662 R:R:V661 12.03113.07NoNo089
48R:R:A712 R:R:L706 20.12353.15NoNo079
49R:R:A712 R:R:S697 17.65423.42NoYes077
50R:R:L731 R:R:L769 23.96834.15YesYes489
51R:R:L731 R:R:T771 16.21154.42YesNo088
52R:R:C580 R:R:L800 32.30893.17NoNo076
53R:R:L797 R:R:L800 25.75999.69NoNo676
54R:R:F801 R:R:L797 22.54584.87NoNo087
55R:R:F801 R:R:F805 19.26463.22NoNo088
56R:R:F805 R:R:V764 13.07123.93NoNo088
57R:R:K760 R:R:V764 10.03824.55NoNo098
58R:R:F716 R:R:W773 22.96856.01YesYes299
59R:R:I724 R:R:W773 16.5942.35NoYes099
60R:R:I724 R:R:V774 12.27273.07NoNo095
61R:R:F775 R:R:V774 10.72945.24NoNo085
62R:R:F803 R:R:L808 13.359710.96YesNo097
63R:R:L808 R:R:L809 10.03824.15NoNo078
64R:R:K820 R:R:W824 10.74285.8NoNo087
65R:R:I728 R:R:T771 10.25973.04NoNo058
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:?1 R:R:L619 5.57 2 Yes No 0 9 0 1
L:L:?1 R:R:H640 5.18 2 Yes Yes 0 9 0 1
L:L:?1 R:R:F643 10.79 2 Yes Yes 0 8 0 1
L:L:?1 R:R:W705 32.1 2 Yes No 0 9 0 1
L:L:?1 R:R:L706 5.57 2 Yes No 0 9 0 1
L:L:?1 R:R:L708 10.03 2 Yes No 0 7 0 1
L:L:?1 R:R:F716 22.56 2 Yes Yes 0 9 0 1
R:R:A615 R:R:F643 6.93 0 No Yes 9 8 2 1
R:R:H640 R:R:L644 3.86 0 Yes No 9 9 1 2
R:R:C687 R:R:H640 4.42 0 No Yes 8 9 2 1
R:R:H640 R:R:Y698 10.89 0 Yes Yes 9 9 1 2
R:R:A715 R:R:H640 5.85 0 No Yes 9 9 2 1
R:R:F643 R:R:F716 8.57 2 Yes Yes 8 9 1 1
R:R:F647 R:R:F716 10.72 2 Yes Yes 9 9 2 1
R:R:F647 R:R:W773 18.04 2 Yes Yes 9 9 2 2
R:R:L706 R:R:Y698 19.93 0 No Yes 9 9 1 2
R:R:N703 R:R:W705 25.99 0 No No 7 9 2 1
R:R:I713 R:R:L708 7.14 0 No No 8 7 2 1
R:R:F716 R:R:W773 6.01 2 Yes Yes 9 9 1 2
R:R:F643 R:R:L639 3.65 2 Yes No 8 9 1 2
R:R:A712 R:R:L706 3.15 0 No No 7 9 2 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 9IV1_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3.86
Number of Linked Nodes 235
Number of Links 243
Number of Hubs 23
Number of Links mediated by Hubs 88
Number of Communities 6
Number of Nodes involved in Communities 29
Number of Links involved in Communities 36
Path Summary
Number Of Nodes in MetaPath 66
Number Of Links MetaPath 65
Number of Shortest Paths 30683
Length Of Smallest Path 3
Average Path Length 14.3799
Length of Longest Path 34
Minimum Path Strength 1.4
Average Path Strength 7.48981
Maximum Path Strength 29.045
Minimum Path Correlation 0.7
Average Path Correlation 0.917255
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 3.22581
Average % Of Corr. Nodes 44.4299
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 42.1724
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeDHT
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodeDHT
NameStanolone
SynonymsAndrostanolona
Identifier
FormulaC19 H30 O2
Molecular Weight290.44
SMILES
PubChem10635
Formal Charge0
Total Atoms51
Total Chiral Atoms7
Total Bonds54
Total Aromatic Bonds0

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtQ6QNK2
Sequence
>9IV1_nogp_Chain_R
QVALSSISY VGCSLSVLC LVATLVTFA VLSSVSTIR NQRYHIHAN 
LSFAVLVAQ VLLLISFRL EPGTTPCQV MAVLLHYFF LSAFAWMLV 
EGLHLYSMV IKVFGSEDS KHRYYYGMG WGFPLLICI ISLSFAMDS 
YGTSNNCWL SLASGAIWA FVAPALFVI VVNIGILIA VTRVISQIS 
AAFKLTAKA VAVLLPILG TSWVFGVLA VNGCAVVFQ YMFATLNSL 
QGLFIFLFH CLLNSEVRA AFKHKTKVW SLT


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
9IV2B2AdhesionAdhesionADGRD1Homo sapiens5α-DHT-chim(NtGi1-Gs)/β1/γ23.532025-02-12doi.org/10.1016/j.cell.2025.01.006
9IV2 (No Gprot) B2AdhesionAdhesionADGRD1Homo sapiens5α-DHT-3.532025-02-12doi.org/10.1016/j.cell.2025.01.006
9IV1B2AdhesionAdhesionADGRD1Homo sapiens5α-DHT-chim(NtGi1-Gs)/β1/γ22.982025-02-12doi.org/10.1016/j.cell.2025.01.006
9IV1 (No Gprot) B2AdhesionAdhesionADGRD1Homo sapiens5α-DHT-2.982025-02-12doi.org/10.1016/j.cell.2025.01.006
8X9UB2AdhesionAdhesionADGRD1Homo sapiensMetenolone-chim(NtGi1-Gs)/β1/γ22.882025-02-12doi.org/10.1016/j.cell.2025.01.006
8X9U (No Gprot) B2AdhesionAdhesionADGRD1Homo sapiensMetenolone-2.882025-02-12doi.org/10.1016/j.cell.2025.01.006
8X9TB2AdhesionAdhesionADGRD1Homo sapiensAP503-chim(NtGi1-Gs)/β1/γ22.752025-02-12doi.org/10.1016/j.cell.2025.01.006
8X9T (No Gprot) B2AdhesionAdhesionADGRD1Homo sapiensAP503-2.752025-02-12doi.org/10.1016/j.cell.2025.01.006
8X9SB2AdhesionAdhesionADGRD1Homo sapiens5α-DHT-chim(NtGi1-Gs)/β1/γ23.492025-02-12doi.org/10.1016/j.cell.2025.01.006
8X9S (No Gprot) B2AdhesionAdhesionADGRD1Homo sapiens5α-DHT-3.492025-02-12doi.org/10.1016/j.cell.2025.01.006
7EPTB2AdhesionAdhesionADGRD1Homo sapiens--Gs/β1/γ232022-05-1110.1038/s41586-022-04619-y
7EPT (No Gprot) B2AdhesionAdhesionADGRD1Homo sapiens--32022-05-1110.1038/s41586-022-04619-y
7WU2B2AdhesionAdhesionADGRD1Homo sapiens--Gs/β1/γ12.82022-04-2710.1038/s41586-022-04580-w
7WU2 (No Gprot) B2AdhesionAdhesionADGRD1Homo sapiens--2.82022-04-2710.1038/s41586-022-04580-w




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 9IV1_nogp.zip



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