Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:Y34 6.915616
2R:R:W45 3.94421
3R:R:I57 2.8425424
4R:R:N67 5.6409
5R:R:N77 4.4175436
6R:R:R79 9.225436
7R:R:F80 10.854538
8R:R:Y85 9.85439
9R:R:D95 6.994569
10R:R:Y102 7.67333607
11R:R:P111 3.54424
12R:R:W121 7.325619
13R:R:R124 5.27167616
14R:R:D129 6.075405
15R:R:L132 4.8275407
16R:R:F151 10.745406
17R:R:M178 4.6415
18R:R:P182 8.31406
19R:R:I189 7.4675443
20R:R:Y202 7.02514
21R:R:W210 7.004516
22R:R:N214 7.1417
23R:R:T217 5.0825417
24R:R:F229 5.1325406
25R:R:W271 8.41618
26R:R:D281 9.1075404
27R:R:E293 6.49414
28R:R:F296 6.8275405
29R:R:Y311 5.352589
30L:L:?1 8.182311310
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:C190 R:R:I189 12.58943.27NoYes033
2R:R:F33 R:R:I189 21.95193.77NoYes063
3R:R:F32 R:R:F33 21.95198.57NoNo026
4R:R:F33 R:R:L201 46.572614.61NoNo061
5R:R:L201 R:R:W121 49.41045.69NoYes019
6R:R:W121 R:R:Y34 20.42695.79YesYes196
7L:L:?1 R:R:Y34 21.69643.36YesYes106
8L:L:?1 R:R:R124 25.49725.22YesYes106
9R:R:R124 R:R:W121 18.85076YesYes169
10L:L:?1 R:R:Q125 25.16714.29YesNo104
11R:R:Q125 R:R:W121 17.813115.33NoYes149
12R:R:E293 R:R:M198 33.07138.12YesNo043
13R:R:D281 R:R:M198 23.11538.32YesNo043
14L:L:?1 R:R:E293 30.87025.69YesYes104
15L:L:?1 R:R:T109 15.52557.38YesNo005
16R:R:G110 R:R:T109 14.44865.46NoNo055
17R:R:G110 R:R:P111 13.26554.06NoYes054
18L:L:?1 R:R:L297 13.80399.9YesNo006
19R:R:L297 R:R:Y102 12.715210.55NoYes067
20R:R:C60 R:R:Y102 14.14594.03NoYes067
21R:R:C60 R:R:F103 11.81125.59NoNo066
22L:L:?1 R:R:W210 10013.04YesYes106
23R:R:W210 R:R:W271 86.995.62YesYes168
24R:R:N303 R:R:W271 93.113713.56NoYes098
25R:R:N303 R:R:N307 91.52195.45NoNo099
26R:R:D95 R:R:N307 49.74848.08YesNo099
27R:R:D95 R:R:N67 43.43216.73YesYes099
28R:R:A92 R:R:N67 32.87084.69NoYes099
29R:R:A92 R:R:V70 29.16833.39NoNo099
30R:R:I74 R:R:V70 25.3953.07NoNo079
31R:R:I74 R:R:M318 22.83234.37NoNo078
32R:R:F80 R:R:M318 15.11288.71YesNo088
33R:R:L139 R:R:N307 51.08876.87NoNo089
34R:R:L139 R:R:Y311 47.09935.86NoYes089
35R:R:I142 R:R:Y311 31.15324.84NoYes889
36R:R:I142 R:R:L87 30.29242.85NoNo088
37R:R:E145 R:R:L87 27.76513.98NoNo088
38R:R:E145 R:R:P83 17.86024.72NoNo086
39R:R:P83 R:R:V164 15.2153.53NoNo067
40R:R:D95 R:R:L91 15.77315.43YesNo099
41R:R:L91 R:R:N138 19.6298.24NoNo098
42R:R:L139 R:R:L91 15.85174.15NoNo089
43R:R:N138 R:R:N90 10.981813.62NoNo089
44R:R:L132 R:R:W271 21.81436.83YesYes078
45R:R:D129 R:R:Y206 14.14595.75YesNo057
46R:R:P182 R:R:Y202 11.16669.74YesYes064
47R:R:M178 R:R:W210 38.81384.65YesYes156
48R:R:F213 R:R:M178 36.72273.73NoYes155
49R:R:F213 R:R:T217 34.36445.19NoYes157
50R:R:L140 R:R:T217 32.19487.37NoYes077
51R:R:L140 R:R:V220 29.88372.98NoNo075
52R:R:L224 R:R:V220 27.54112.98NoNo065
53R:R:H147 R:R:L224 26.3586.43NoNo076
54R:R:F151 R:R:H147 24.031113.58YesNo067
55R:R:L277 R:R:M198 10.78534.24NoNo043
56R:R:F267 R:R:W271 11.748316.04NoYes198
57R:R:F218 R:R:F267 15.026310.72NoNo059
58R:R:F151 R:R:V150 17.98992.62YesNo068
59R:R:V150 R:R:V232 16.741.6NoNo087
60R:R:L256 R:R:V232 14.30714.47NoNo077
61R:R:F229 R:R:L256 13.11226.09YesNo067
62R:R:I310 R:R:Y311 11.09584.84NoYes089
63L:L:?1 R:R:D129 22.01087.77YesYes005
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
R:R:I30 R:R:Y34 4.84 0 No Yes 6 6 2 1
R:R:K39 R:R:Y34 9.55 1 No Yes 8 6 1 1
R:R:L41 R:R:Y34 8.21 0 No Yes 2 6 2 1
R:R:W121 R:R:Y34 5.79 1 Yes Yes 9 6 2 1
R:R:P200 R:R:Y34 9.74 0 No Yes 6 6 2 1
L:L:?1 R:R:Y34 3.36 1 Yes Yes 0 6 0 1
R:R:E293 R:R:K39 6.75 1 Yes No 4 8 1 1
L:L:?1 R:R:K39 11.1 1 Yes No 0 8 0 1
R:R:L297 R:R:Y102 10.55 0 No Yes 6 7 1 2
R:R:R124 R:R:Y104 3.09 1 Yes No 6 5 1 2
R:R:L105 R:R:R124 7.29 0 No Yes 6 6 2 1
R:R:G110 R:R:T109 5.46 0 No No 5 5 2 1
L:L:?1 R:R:T109 7.38 1 Yes No 0 5 0 1
R:R:R124 R:R:T113 5.17 1 Yes No 6 5 1 1
L:L:?1 R:R:T113 11.6 1 Yes No 0 5 0 1
R:R:L116 R:R:R124 4.86 0 No Yes 6 6 2 1
R:R:R124 R:R:W121 6 1 Yes Yes 6 9 1 2
R:R:Q125 R:R:W121 15.33 1 No Yes 4 9 1 2
R:R:W121 R:R:Y202 7.72 1 Yes Yes 9 4 2 2
L:L:?1 R:R:R124 5.22 1 Yes Yes 0 6 0 1
R:R:Q125 R:R:Y202 7.89 1 No Yes 4 4 1 2
L:L:?1 R:R:Q125 14.29 1 Yes No 0 4 0 1
R:R:D129 R:R:G126 5.03 0 Yes No 5 6 1 2
R:R:D129 R:R:Y202 5.75 0 Yes Yes 5 4 1 2
R:R:D129 R:R:Y206 5.75 0 Yes No 5 7 1 2
L:L:?1 R:R:D129 7.77 1 Yes Yes 0 5 0 1
R:R:M178 R:R:T133 7.53 1 Yes No 5 6 2 2
R:R:T133 R:R:W210 6.06 1 No Yes 6 6 2 1
R:R:M178 R:R:W210 4.65 1 Yes Yes 5 6 2 1
R:R:E293 R:R:M198 8.12 1 Yes No 4 3 1 2
L:L:?1 R:R:L207 3.96 1 Yes No 0 6 0 1
R:R:N214 R:R:W210 5.65 1 Yes Yes 7 6 2 1
R:R:W210 R:R:W271 5.62 1 Yes Yes 6 8 1 2
L:L:?1 R:R:W210 13.04 1 Yes Yes 0 6 0 1
R:R:N214 R:R:W271 4.52 1 Yes Yes 7 8 2 2
R:R:E293 R:R:K294 5.4 1 Yes No 4 4 1 1
L:L:?1 R:R:E293 5.69 1 Yes Yes 0 4 0 1
L:L:?1 R:R:K294 10.09 1 Yes No 0 4 0 1
L:L:?1 R:R:L297 9.9 1 Yes No 0 6 0 1
R:R:K294 R:R:V52 3.04 1 No No 4 5 1 2
L:L:?1 R:R:L278 2.97 1 Yes No 0 6 0 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 7TD1_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3.07
Number of Linked Nodes 279
Number of Links 304
Number of Hubs 30
Number of Links mediated by Hubs 122
Number of Communities 9
Number of Nodes involved in Communities 48
Number of Links involved in Communities 61
Path Summary
Number Of Nodes in MetaPath 64
Number Of Links MetaPath 63
Number of Shortest Paths 53747
Length Of Smallest Path 3
Average Path Length 12.8053
Length of Longest Path 32
Minimum Path Strength 1.21
Average Path Strength 6.76593
Maximum Path Strength 16.48
Minimum Path Correlation 0.7
Average Path Correlation 0.931625
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 4
Average % Of Corr. Nodes 55.925
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 37.5883
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function• binding   • ion binding   • anion binding   • phospholipid binding   • lipid binding   • lysophosphatidic acid binding   • carbohydrate derivative binding   • small molecule binding   • bioactive lipid receptor activity   • molecular transducer activity   • G protein-coupled receptor activity   • transmembrane signaling receptor activity   • signaling receptor activity   • lysophosphatidic acid receptor activity   • protein binding   • G-protein alpha-subunit binding   • PDZ domain binding   • protein domain specific binding   • developmental process   • multicellular organism development   • multicellular organismal process   • nerve development   • cranial nerve development   • anatomical structure development   • optic nerve development   • nervous system development   • system development   • regulation of biological process   • positive regulation of programmed cell death   • regulation of cellular process   • regulation of apoptotic process   • biological regulation
Gene OntologyBiological Process• developmental process   • multicellular organism development   • multicellular organismal process   • nerve development   • cranial nerve development   • anatomical structure development   • optic nerve development   • nervous system development   • system development   • regulation of biological process   • positive regulation of programmed cell death   • regulation of cellular process   • regulation of apoptotic process   • biological regulation   • positive regulation of biological process   • regulation of programmed cell death   • cell death   • positive regulation of apoptotic process   • cellular process   • apoptotic process   • programmed cell death   • positive regulation of cellular process   • head development   • animal organ development   • brain development   • cerebellum development   • central nervous system development   • metencephalon development   • hindbrain development   • regulation of developmental process   • cellular developmental process   • cell projection organization   • positive regulation of dendritic spine development   • cell development   • regulation of dendritic spine development   • neuron projection development   • cellular component organization   • positive regulation of developmental process   • neurogenesis   • neuron differentiation   • dendrite development   • cell differentiation   • cellular component organization or biogenesis   • dendritic spine development   • plasma membrane bounded cell projection organization   • generation of neurons   • neuron development   • regulation of neuron projection development   • regulation of cellular component organization   • negative regulation of biological process   • negative regulation of cellular process   • negative regulation of cell projection organization   • negative regulation of cellular component organization   • regulation of cell projection organization   • negative regulation of neuron projection development   • regulation of plasma membrane bounded cell projection organization   • metabolic process   • regulation of metabolic process   • cell chemotaxis   • cellular response to stimulus   • chemotaxis   • response to stimulus   • response to external stimulus   • cellular response to chemical stimulus   • taxis   • response to chemical   • cell migration   • cell motility   • locomotion   • signaling   • phospholipase C-activating G protein-coupled receptor signaling pathway   • cell communication   • G protein-coupled receptor signaling pathway   • signal transduction   • regulation of localization   • cellular localization   • transport   • regulation of transport   • regulation of synaptic vesicle cycle   • synaptic vesicle cycle   • regulation of vesicle-mediated transport   • establishment of localization   • vesicle-mediated transport   • vesicle-mediated transport in synapse   • localization   • establishment of localization in cell   • import into cell   • receptor internalization   • postsynaptic neurotransmitter receptor internalization   • regulation of receptor internalization   • regulation of postsynaptic neurotransmitter receptor internalization   • regulation of biological quality   • regulation of endocytosis   • regulation of receptor-mediated endocytosis   • protein-containing complex localization   • neurotransmitter receptor internalization   • regulation of postsynaptic membrane neurotransmitter receptor levels   • postsynaptic endocytosis   • endocytosis   • receptor-mediated endocytosis   • corpus callosum development   • forebrain development   • telencephalon development   • positive regulation of cytosolic calcium ion concentration   • positive regulation of cell communication   • positive regulation of signal transduction   • positive regulation of canonical NF-kappaB signal transduction   • regulation of signal transduction   • intracellular signal transduction   • positive regulation of response to stimulus   • regulation of intracellular signal transduction   • intracellular signaling cassette   • regulation of signaling   • positive regulation of intracellular signal transduction   • canonical NF-kappaB signal transduction   • regulation of response to stimulus   • regulation of cell communication   • regulation of canonical NF-kappaB signal transduction   • positive regulation of signaling   • cellular component biogenesis   • bleb assembly   • cellular component assembly   • plasma membrane bounded cell projection assembly   • cell projection assembly   • small GTPase-mediated signal transduction   • regulation of small GTPase mediated signal transduction   • Rho protein signal transduction   • regulation of Rho protein signal transduction   • positive regulation of Rho protein signal transduction   • positive regulation of small GTPase mediated signal transduction   • positive regulation of locomotion   • regulation of cell motility   • positive regulation of smooth muscle cell chemotaxis   • regulation of smooth muscle cell chemotaxis   • regulation of response to external stimulus   • regulation of smooth muscle cell migration   • positive regulation of smooth muscle cell migration   • positive regulation of chemotaxis   • positive regulation of cell migration   • muscle cell migration   • positive regulation of response to external stimulus   • positive regulation of cell motility   • smooth muscle cell chemotaxis   • regulation of cell migration   • regulation of chemotaxis   • smooth muscle cell migration   • regulation of locomotion   • negative regulation of organelle assembly   • negative regulation of plasma membrane bounded cell projection assembly   • cilium assembly   • cilium organization   • organelle assembly   • regulation of cell projection assembly   • regulation of cellular component biogenesis   • regulation of organelle organization   • regulation of plasma membrane bounded cell projection assembly   • organelle organization   • regulation of cilium assembly   • negative regulation of organelle organization   • regulation of organelle assembly   • negative regulation of cilium assembly   • cellular response to oxygen levels   • response to oxygen levels   • response to abiotic stimulus   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • regulation of cell shape   • cell morphogenesis   • regulation of cell morphogenesis   • anatomical structure morphogenesis   • regulation of anatomical structure morphogenesis   • negative regulation of signaling   • negative regulation of intracellular signal transduction   • negative regulation of cAMP/PKA signal transduction   • negative regulation of cell communication   • cAMP/PKA signal transduction   • negative regulation of response to stimulus   • negative regulation of signal transduction   • regulation of cAMP/PKA signal transduction   • oligodendrocyte development   • glial cell development   • gliogenesis   • oligodendrocyte differentiation   • glial cell differentiation   • positive regulation of MAPK cascade   • regulation of MAPK cascade   • MAPK cascade   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • myelination   • axon ensheathment   • ensheathment of neurons   • response to lipid   • response to 1-oleoyl-sn-glycerol 3-phosphate   • response to organophosphorus   • response to oxygen-containing compound   • cellular response to oxygen-containing compound   • cellular response to lipid   • cellular response to 1-oleoyl-sn-glycerol 3-phosphate   • positive regulation of organelle organization   • regulation of cytoskeleton organization   • regulation of actin filament-based process   • positive regulation of cellular component organization   • regulation of actin filament bundle assembly   • positive regulation of actin filament bundle assembly   • actin filament bundle organization   • positive regulation of stress fiber assembly   • actin filament-based process   • stress fiber assembly   • regulation of actin filament organization   • actin cytoskeleton organization   • actomyosin structure organization   • positive regulation of cellular component biogenesis   • positive regulation of cytoskeleton organization   • actin filament organization   • positive regulation of supramolecular fiber organization   • regulation of stress fiber assembly   • contractile actin filament bundle assembly   • regulation of actomyosin structure organization   • regulation of actin cytoskeleton organization   • actin filament bundle assembly   • regulation of supramolecular fiber organization   • supramolecular fiber organization   • cytoskeleton organization   • cell periphery   • postsynapse   • cellular anatomical structure   • postsynaptic membrane   • synapse   • cell junction   • membrane   • plasma membrane   • plasma membrane region   • synaptic membrane   • presynapse   • presynaptic membrane   • intracellular anatomical structure   • cytoplasm
Gene OntologyCellular Component• cell periphery   • postsynapse   • cellular anatomical structure   • postsynaptic membrane   • synapse   • cell junction   • membrane   • plasma membrane   • plasma membrane region   • synaptic membrane   • presynapse   • presynaptic membrane   • intracellular anatomical structure   • cytoplasm   • glutamatergic synapse   • somatodendritic compartment   • cell projection   • dendrite   • dendritic tree   • neuron projection   • dendritic shaft   • plasma membrane bounded cell projection   • neuron spine   • dendritic spine   • cell body   • neuronal cell body   • cell surface   • GABA-ergic synapse   • membrane-bounded organelle   • endosome   • intracellular vesicle   • intracellular membrane-bounded organelle   • endomembrane system   • intracellular organelle   • cytoplasmic vesicle   • organelle   • vesicle   • protein-containing complex binding   • binding   • protein binding   • enzyme binding   • GTPase binding   • pyrophosphatase activity   • GTPase activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • signaling receptor complex adaptor activity   • protein-macromolecule adaptor activity   • molecular adaptor activity   • signaling adaptor activity   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • phospholipase C-activating G protein-coupled receptor signaling pathway   • cell communication   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction   • multicellular organismal process   • system process   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of taste   • developmental process   • sensory organ development   • eye development   • animal organ development   • retina development in camera-type eye   • visual system development   • multicellular organism development   • camera-type eye development   • anatomical structure development   • sensory system development   • system development   • cell population proliferation   • cellular response to nitrogen compound   • response to dopamine   • cellular response to dopamine   • response to monoamine   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • G protein-coupled dopamine receptor signaling pathway   • response to oxygen-containing compound   • response to nitrogen compound   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cellular response to oxygen-containing compound   • cellular response to chemical stimulus   • cellular response to monoamine stimulus   • response to chemical   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • response to ketone   • response to prostaglandin   • response to lipid   • response to endogenous stimulus   • response to alcohol   • cellular response to prostaglandin stimulus   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to alcohol   • response to hormone   • cellular response to lipid   • response to prostaglandin E   • cellular response to ketone   • cellular response to hormone stimulus   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cytoplasmic side of plasma membrane   • GTPase complex   • extrinsic component of membrane   • extrinsic component of cytoplasmic side of plasma membrane   • non-motile cilium   • 9+0 non-motile cilium   • cilium   • photoreceptor disc membrane   • photoreceptor outer segment   • photoreceptor cell cilium   • organelle membrane   • D2 dopamine receptor binding   • signaling receptor binding   • G protein-coupled receptor binding   • dopamine receptor binding   • phosphorus-oxygen lyase activity   • enzyme regulator activity   • cyclase regulator activity   • molecular function regulator activity   • cyclase activity   • adenylate cyclase regulator activity   • lyase activity   • adenylate cyclase activity   • GTPase activating protein binding   • guanyl nucleotide binding   • GTP binding   • nucleotide binding   • guanyl ribonucleotide binding   • purine ribonucleotide binding   • purine ribonucleoside triphosphate binding   • nucleoside phosphate binding   • ion binding   • purine nucleotide binding   • anion binding   • heterocyclic compound binding   • carbohydrate derivative binding   • ribonucleotide binding   • small molecule binding   • cation binding   • magnesium ion binding   • metal ion binding   • GDP binding   • G protein-coupled serotonin receptor binding   • G-protein beta/gamma-subunit complex binding   • G protein activity   • protein localization   • protein localization to postsynaptic specialization membrane   • cellular localization   • protein localization to postsynaptic membrane   • protein localization to cell periphery   • protein localization to synapse   • localization within membrane   • protein localization to membrane   • protein-containing complex localization   • neurotransmitter receptor localization to postsynaptic specialization membrane   • localization   • regulation of postsynaptic membrane neurotransmitter receptor levels   • protein localization to organelle   • cellular macromolecule localization   • macromolecule localization   • protein localization to postsynapse   • regulation of biological quality   • protein localization to cell junction   • receptor localization to synapse   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • cell division   • leukocyte migration   • immune system process   • mononuclear cell migration   • lymphocyte migration   • cell migration   • T cell migration   • cell motility   • regulation of steroid biosynthetic process   • regulation of cholesterol biosynthetic process   • regulation of cholesterol metabolic process   • steroid metabolic process   • regulation of lipid metabolic process   • sterol metabolic process   • positive regulation of biological process   • cholesterol metabolic process   • lipid biosynthetic process   • alcohol metabolic process   • regulation of primary metabolic process   • positive regulation of metabolic process   • regulation of small molecule metabolic process   • positive regulation of biosynthetic process   • positive regulation of lipid metabolic process   • small molecule metabolic process   • steroid biosynthetic process   • positive regulation of cellular process   • regulation of biosynthetic process   • secondary alcohol biosynthetic process   • regulation of alcohol biosynthetic process   • small molecule biosynthetic process   • regulation of steroid metabolic process   • cholesterol biosynthetic process   • positive regulation of cholesterol biosynthetic process   • primary metabolic process   • secondary alcohol metabolic process   • positive regulation of steroid biosynthetic process   • biosynthetic process   • sterol biosynthetic process   • positive regulation of lipid biosynthetic process   • regulation of sterol biosynthetic process   • alcohol biosynthetic process   • positive regulation of cholesterol metabolic process   • positive regulation of steroid metabolic process   • metabolic process   • regulation of lipid biosynthetic process   • positive regulation of small molecule metabolic process   • regulation of metabolic process   • positive regulation of alcohol biosynthetic process   • positive regulation of sterol biosynthetic process   • lipid metabolic process   • regulation of cytoskeleton organization   • regulation of cellular component organization   • microtubule cytoskeleton organization   • regulation of mitotic spindle organization   • mitotic cell cycle   • cellular component organization   • cell cycle   • cellular component organization or biogenesis   • regulation of cell cycle   • microtubule cytoskeleton organization involved in mitosis   • spindle organization   • cell cycle process   • regulation of cell cycle process   • regulation of microtubule-based process   • regulation of spindle organization   • regulation of organelle organization   • mitotic spindle organization   • organelle organization   • mitotic cell cycle process   • microtubule-based process   • cytoskeleton organization   • regulation of microtubule cytoskeleton organization   • positive regulation of protein localization to cell periphery   • regulation of localization   • regulation of protein localization   • positive regulation of protein localization to cell cortex   • regulation of protein localization to cell periphery   • regulation of cellular localization   • regulation of protein localization to cell cortex   • positive regulation of protein localization   • protein localization to cell cortex   • trans-synaptic signaling   • regulation of signaling   • negative regulation of signaling   • modulation of chemical synaptic transmission   • negative regulation of biological process   • cell-cell signaling   • negative regulation of synaptic transmission   • negative regulation of cell communication   • chemical synaptic transmission   • synaptic signaling   • regulation of trans-synaptic signaling   • anterograde trans-synaptic signaling   • negative regulation of cellular process   • regulation of cell communication   • cellular response to forskolin   • response to forskolin   • midbody   • cell cortex   • centrosome   • microtubule organizing center   • cytoskeleton   • membraneless organelle   • intracellular membraneless organelle   • microtubule cytoskeleton   • cytosol   • nucleus   • G-protein beta-subunit binding
SCOP2Domain Identifier• G protein-coupled receptor-like   • WD40 repeat-like   • Ras-like P-loop GTPases   • Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• G protein-coupled receptor-like   • WD40 repeat-like   • Ras-like P-loop GTPases   • Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeNKP
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodeNKP
Name(2R)-2-hydroxy-3-(phosphonooxy)propyl (9E)-octadec-9-enoate
Synonyms18:1 LPA; oleoyl lysophosphatidic acid
Identifier
FormulaC21 H41 O7 P
Molecular Weight436.52
SMILES
PubChem49837858
Formal Charge0
Total Atoms70
Total Chiral Atoms1
Total Bonds69
Total Aromatic Bonds0

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtQ92633
Sequence
>7TD1_nogp_Chain_R
QCFYNESIA FFYNRSGKH LATEWNTVS KLVMGLGIT VCIFIMLAN 
LLVMVAIYV NRRFHFPIY YLMANLAAA DFFAGLAYF YLMFNTGPN 
TRRLTVSTW LLRQGLIDT SLTASVANL LAIAIERHI TVFRMQLHT 
RMSNRRVVV VIVVIWTMA IVMGAIPSV GWNCICDIE NCSNMAPLY 
SDSYLVFWA IFNLVTFVV MVVLYAHIF GYVRQRTMR MSRRDTMMS 
LLKTVVIVL GAFIICWTP GLVLLLLDV CCPQCDVLA YEKFFLLLA 
EFNSAMNPI IYSYRDKEM SATFR


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
9IZGALipidLysophospholipidLPA1Homo sapiensNKP-chim(NtGi1-Gs-CtGq)/β1/γ23.042025-01-0110.1016/j.jsb.2024.108164
9IZG (No Gprot) ALipidLysophospholipidLPA1Homo sapiensNKP-3.042025-01-0110.1016/j.jsb.2024.108164
9IZHALipidLysophospholipidLPA1Homo sapiensLPA-chim(NtGi2-G13)/β1/γ23.042025-01-01doi.org/10.1016/j.jsb.2024.108164
9IZH (No Gprot) ALipidLysophospholipidLPA1Homo sapiensLPA-3.042025-01-01doi.org/10.1016/j.jsb.2024.108164
9J5VALipidLysophospholipidLPA1Homo sapiensCpY-Gi1/β1/γ22.862024-11-2710.1038/s42003-024-07152-y
9J5V (No Gprot) ALipidLysophospholipidLPA1Homo sapiensCpY-2.862024-11-2710.1038/s42003-024-07152-y
9IZFALipidLysophospholipidLPA1Homo sapiensNKP-Gi1/β1/γ23.142025-01-0110.1016/j.jsb.2024.108164
9IZF (No Gprot) ALipidLysophospholipidLPA1Homo sapiensNKP-3.142025-01-0110.1016/j.jsb.2024.108164
7YU4ALipidLysophospholipidLPA1Homo sapiensONO-0740556--3.72022-10-0510.1038/s41467-022-33121-2
7YU8ALipidLysophospholipidLPA1Homo sapiensONO-0740556-Gi1/β1/γ25.62022-10-0510.1038/s41467-022-33121-2
7YU8 (No Gprot) ALipidLysophospholipidLPA1Homo sapiensONO-0740556-5.62022-10-0510.1038/s41467-022-33121-2
7YU7ALipidLysophospholipidLPA1Homo sapiensONO-0740556-Gi1/β1/γ24.52022-10-0510.1038/s41467-022-33121-2
7YU7 (No Gprot) ALipidLysophospholipidLPA1Homo sapiensONO-0740556-4.52022-10-0510.1038/s41467-022-33121-2
7YU6ALipidLysophospholipidLPA1Homo sapiensONO-0740556-Gi1/β1/γ23.92022-10-0510.1038/s41467-022-33121-2
7YU6 (No Gprot) ALipidLysophospholipidLPA1Homo sapiensONO-0740556-3.92022-10-0510.1038/s41467-022-33121-2
7YU5ALipidLysophospholipidLPA1Homo sapiensONO-0740556-Gi1/β1/γ23.72022-10-0510.1038/s41467-022-33121-2
7YU5 (No Gprot) ALipidLysophospholipidLPA1Homo sapiensONO-0740556-3.72022-10-0510.1038/s41467-022-33121-2
7YU3ALipidLysophospholipidLPA1Homo sapiensONO-0740556-Gi1/β1/γ23.52022-10-0510.1038/s41467-022-33121-2
7YU3 (No Gprot) ALipidLysophospholipidLPA1Homo sapiensONO-0740556-3.52022-10-0510.1038/s41467-022-33121-2
7TD2ALipidLysophospholipidLPA1Homo sapiensLPA-Gi1/β1/γ23.112022-02-0910.1038/s41467-022-28417-2
7TD2 (No Gprot) ALipidLysophospholipidLPA1Homo sapiensLPA-3.112022-02-0910.1038/s41467-022-28417-2
7TD1ALipidLysophospholipidLPA1Homo sapiensLPA-Gi1/β1/γ23.082022-02-0910.1038/s41467-022-28417-2
7TD1 (No Gprot) ALipidLysophospholipidLPA1Homo sapiensLPA-3.082022-02-0910.1038/s41467-022-28417-2
7TD0ALipidLysophospholipidLPA1Homo sapiensLPA-Gi1/β1/γ22.832022-02-0910.1038/s41467-022-28417-2
7TD0 (No Gprot) ALipidLysophospholipidLPA1Homo sapiensLPA-2.832022-02-0910.1038/s41467-022-28417-2
4Z36ALipidLysophospholipidLPA1Homo sapiensONO-3080573--2.92015-06-0310.1016/j.cell.2015.06.002
4Z35ALipidLysophospholipidLPA1Homo sapiensONO-9910539--2.92015-06-0310.1016/j.cell.2015.06.002
4Z34ALipidLysophospholipidLPA1Homo sapiensONO-9780307--32015-06-0310.1016/j.cell.2015.06.002




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Download 7TD1_nogp.zip



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