Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:?1 7.900621610
2R:R:Y34 6.65667616
3R:R:K39 7.525418
4R:R:V70 3.4275409
5R:R:F80 8.12167628
6R:R:N90 11.6575419
7R:R:L91 6.186519
8R:R:D95 8.88519
9R:R:Y102 6.69667637
10R:R:M106 4.9125436
11R:R:W121 9.21571719
12R:R:R124 10.156516
13R:R:Q125 10.94414
14R:R:D129 8.758515
15R:R:L132 7.09407
16R:R:V136 6.6418
17R:R:N138 9.4275418
18R:R:L139 6.6775418
19R:R:E145 6.03508
20R:R:R146 6.346519
21R:R:H147 9.97447
22R:R:F151 11.9475446
23R:R:I171 5.918517
24R:R:M178 5.7825415
25R:R:L201 8.8525401
26R:R:Y202 6.03429714
27R:R:Y206 7.322517
28R:R:W210 8.65714716
29R:R:N214 7.536517
30R:R:T217 5.82407
31R:R:F218 6.825415
32R:R:Y225 6.145619
33R:R:F229 5.5875406
34R:R:F267 9.545419
35R:R:W271 8.74667618
36R:R:E293 9.0975414
37R:R:N303 7.26419
38R:R:S304 4.6925419
39R:R:M306 3.59406
40R:R:N307 10.57419
41R:R:Y311 5.42375819
42R:R:M318 6.545408
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:?1 R:R:Y34 25.07076.71YesYes106
2L:L:?1 R:R:R124 26.031211.3YesYes106
3R:R:R124 R:R:W121 16.541713YesYes169
4R:R:W121 R:R:Y34 16.15611.58YesYes196
5R:R:L201 R:R:W121 40.567413.67YesYes019
6R:R:F33 R:R:L201 39.230414.61NoYes061
7R:R:F32 R:R:F33 22.43517.5NoNo026
8L:L:?1 R:R:Q125 17.385418.1YesYes104
9R:R:Q125 R:R:W121 15.685713.14YesYes149
10R:R:F32 R:R:R36 11.2238.55NoNo023
11R:R:F33 R:R:I189 11.2236.28NoNo063
12L:L:?1 R:R:E293 19.88729.48YesYes104
13L:L:?1 R:R:T109 21.70527.38YesNo005
14R:R:G110 R:R:T109 20.57875.46NoNo055
15R:R:G110 R:R:P111 11.67174.06NoNo054
16L:L:?1 R:R:L132 60.66663.96YesYes007
17R:R:L132 R:R:S131 29.39674.5YesNo076
18R:R:A98 R:R:S131 28.13813.42NoNo086
19R:R:A98 R:R:S304 27.9893.42NoYes089
20R:R:D95 R:R:S304 27.89537.36YesYes199
21R:R:D95 R:R:N67 10012.12YesNo099
22R:R:L132 R:R:W271 44.27567.97YesYes078
23R:R:N303 R:R:W271 88.19469.04YesYes198
24R:R:N303 R:R:N307 79.576512.26YesYes199
25R:R:D95 R:R:N307 71.70069.42YesYes199
26L:L:?1 R:R:W210 61.682413.85YesYes106
27R:R:W210 R:R:W271 59.98435.62YesYes168
28R:R:A92 R:R:N67 96.17354.69NoNo099
29R:R:A92 R:R:V70 93.84073.39NoYes099
30R:R:S312 R:R:V70 44.41084.85NoYes079
31R:R:M318 R:R:S312 43.53954.6YesNo087
32R:R:F80 R:R:M318 46.493111.2YesYes088
33R:R:F322 R:R:V70 47.05863.93NoYes069
34R:R:F322 R:R:M318 43.62716.22NoYes068
35R:R:F80 R:R:Y85 37.32029.28YesNo089
36R:R:I84 R:R:Y85 70.74473.63NoNo089
37R:R:E145 R:R:I84 66.96128.2YesNo088
38R:R:E145 R:R:V164 34.02084.28YesNo087
39R:R:P83 R:R:V164 26.75195.3NoNo067
40R:R:M159 R:R:P83 19.123410.06NoNo066
41R:R:M159 R:R:N161 15.30464.21NoNo063
42R:R:N161 R:R:Y86 11.48279.3NoNo034
43R:R:D315 R:R:M318 38.9234.16NoYes088
44R:R:D315 R:R:Y85 37.04675.75NoNo089
45R:R:L139 R:R:N303 19.82734.12YesYes189
46R:R:L139 R:R:Y311 11.61484.69YesYes189
47R:R:L91 R:R:N138 16.61545.49YesYes198
48R:R:L116 R:R:W121 18.26284.56NoYes069
49R:R:L116 R:R:T120 17.06114.42NoNo064
50R:R:T117 R:R:T120 11.37666.28NoNo064
51R:R:L122 R:R:Y202 10.91713.52NoYes054
52R:R:W210 R:R:Y206 22.70416.75YesYes167
53R:R:N214 R:R:W210 24.01346.78YesYes176
54R:R:V136 R:R:W271 31.84324.9YesYes188
55R:R:N214 R:R:V136 11.87158.87YesYes178
56R:R:T217 R:R:V136 53.87884.76YesYes078
57R:R:M178 R:R:W210 12.88578.14YesYes156
58R:R:F213 R:R:M178 11.93293.73NoYes055
59R:R:F213 R:R:T217 23.22355.19NoYes057
60R:R:F213 R:R:N214 12.18047.25NoYes057
61R:R:L140 R:R:T217 73.375610.32NoYes077
62R:R:L140 R:R:V220 69.67212.98NoNo075
63R:R:L224 R:R:V220 67.81572.98NoNo065
64R:R:H147 R:R:L224 64.093611.57YesNo076
65R:R:F151 R:R:H147 35.737313.58YesYes467
66R:R:H147 R:R:I228 24.58813.98YesNo079
67R:R:E145 R:R:R163 11.13388.14YesNo086
68R:R:E145 R:R:T149 14.70374.23YesNo088
69R:R:R152 R:R:T149 11.13549.06NoNo058
70R:R:F151 R:R:V150 22.63343.93YesNo068
71R:R:I228 R:R:V150 22.68724.61NoNo098
72R:R:F151 R:R:Y231 11.465814.44YesNo066
73R:R:D129 R:R:Y202 14.33345.75YesYes154
74R:R:E293 R:R:M198 17.738813.53YesNo043
75R:R:L277 R:R:M198 16.69847.07NoNo043
76R:R:V150 R:R:V232 41.46941.6NoNo087
77R:R:L256 R:R:V232 30.47854.47NoNo077
78R:R:F229 R:R:L256 26.99476.09YesNo067
79R:R:F229 R:R:L257 11.58568.53YesNo067
80R:R:L277 R:R:Y292 10.33784.69NoNo043
81R:R:W121 R:R:Y202 15.51673.86YesYes194
82R:R:Y202 R:R:Y206 14.22124.96YesYes147
83R:R:D129 R:R:W210 14.531613.4YesYes156
84R:R:F267 R:R:N303 11.59953.62YesYes199
85R:R:F267 R:R:V136 11.52427.87YesYes198
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:?1 R:R:Y34 6.71 1 Yes Yes 0 6 0 1
L:L:?1 R:R:K39 9.08 1 Yes Yes 0 8 0 1
L:L:?1 R:R:T109 7.38 1 Yes No 0 5 0 1
L:L:?1 R:R:T113 6.33 1 Yes No 0 5 0 1
L:L:?1 R:R:R124 11.3 1 Yes Yes 0 6 0 1
L:L:?1 R:R:Q125 18.1 1 Yes Yes 0 4 0 1
L:L:?1 R:R:D129 12.62 1 Yes Yes 0 5 0 1
L:L:?1 R:R:L132 3.96 1 Yes Yes 0 7 0 1
L:L:?1 R:R:W210 13.85 1 Yes Yes 0 6 0 1
L:L:?1 R:R:E293 9.48 1 Yes Yes 0 4 0 1
L:L:?1 R:R:K294 7.06 1 Yes No 0 4 0 1
L:L:?1 R:R:L297 9.9 1 Yes No 0 6 0 1
R:R:I30 R:R:Y34 3.63 1 No Yes 6 6 2 1
R:R:I30 R:R:W121 4.7 1 No Yes 6 9 2 2
R:R:L41 R:R:Y34 4.69 0 No Yes 2 6 2 1
R:R:T113 R:R:Y34 4.99 1 No Yes 5 6 1 1
R:R:W121 R:R:Y34 11.58 1 Yes Yes 9 6 2 1
R:R:P200 R:R:Y34 8.34 0 No Yes 6 6 2 1
R:R:K39 R:R:P200 10.04 1 Yes No 8 6 1 2
R:R:K39 R:R:L290 4.23 1 Yes No 8 3 1 2
R:R:E293 R:R:K39 6.75 1 Yes Yes 4 8 1 1
R:R:K294 R:R:V52 9.11 0 No No 4 5 1 2
R:R:L105 R:R:Y102 3.52 0 No Yes 6 7 2 2
R:R:L297 R:R:Y102 5.86 0 No Yes 6 7 1 2
R:R:E301 R:R:Y102 12.35 0 No Yes 7 7 2 2
R:R:L105 R:R:R124 9.72 0 No Yes 6 6 2 1
R:R:N108 R:R:R124 13.26 0 No Yes 5 6 2 1
R:R:G110 R:R:T109 5.46 0 No No 5 5 2 1
R:R:R124 R:R:W121 13 1 Yes Yes 6 9 1 2
R:R:Q125 R:R:W121 13.14 1 Yes Yes 4 9 1 2
R:R:W121 R:R:Y202 3.86 1 Yes Yes 9 4 2 2
R:R:Q125 R:R:R124 3.5 1 Yes Yes 4 6 1 1
R:R:Q125 R:R:Y202 9.02 1 Yes Yes 4 4 1 2
R:R:D129 R:R:Y202 5.75 1 Yes Yes 5 4 1 2
R:R:D129 R:R:Y206 10.34 1 Yes Yes 5 7 1 2
R:R:D129 R:R:W210 13.4 1 Yes Yes 5 6 1 1
R:R:L132 R:R:S131 4.5 0 Yes No 7 6 1 2
R:R:L132 R:R:W271 7.97 0 Yes Yes 7 8 1 2
R:R:E301 R:R:L132 11.93 0 No Yes 7 7 2 1
R:R:M178 R:R:T133 7.53 1 Yes No 5 6 2 2
R:R:T133 R:R:W210 6.06 1 No Yes 6 6 2 1
R:R:M178 R:R:W210 8.14 1 Yes Yes 5 6 2 1
R:R:L207 R:R:S196 4.5 0 No No 6 5 1 2
R:R:E293 R:R:M198 13.53 1 Yes No 4 3 1 2
R:R:Y202 R:R:Y206 4.96 1 Yes Yes 4 7 2 2
R:R:W210 R:R:Y206 6.75 1 Yes Yes 6 7 1 2
R:R:D281 R:R:L207 4.07 0 No No 4 6 2 1
R:R:N214 R:R:W210 6.78 1 Yes Yes 7 6 2 1
R:R:W210 R:R:W271 5.62 1 Yes Yes 6 8 1 2
R:R:A211 R:R:L278 4.73 0 No No 4 6 2 1
R:R:N214 R:R:W271 7.91 1 Yes Yes 7 8 2 2
R:R:E293 R:R:L290 6.63 1 Yes No 4 3 1 2
L:L:?1 R:R:L207 2.97 1 Yes No 0 6 0 1
L:L:?1 R:R:L278 2.97 1 Yes No 0 6 0 1
L:L:?1 R:R:G274 2.45 1 Yes No 0 5 0 1
L:L:?1 R:R:A300 2.25 1 Yes No 0 7 0 1
R:R:D129 R:R:G126 1.68 1 Yes No 5 6 1 2

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 9IZF_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3.39
Number of Linked Nodes 270
Number of Links 312
Number of Hubs 42
Number of Links mediated by Hubs 158
Number of Communities 6
Number of Nodes involved in Communities 56
Number of Links involved in Communities 86
Path Summary
Number Of Nodes in MetaPath 86
Number Of Links MetaPath 85
Number of Shortest Paths 145938
Length Of Smallest Path 3
Average Path Length 15.8512
Length of Longest Path 33
Minimum Path Strength 1.465
Average Path Strength 7.10538
Maximum Path Strength 18.3
Minimum Path Correlation 0.7
Average Path Correlation 0.92865
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 3.44828
Average % Of Corr. Nodes 44.8973
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 50.7134
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function• binding   • tetrapyrrole binding   • heme binding   • electron transfer activity   • cation binding   • transition metal ion binding   • iron ion binding   • ion binding   • metal ion binding   • small molecule binding   • anion binding   • phospholipid binding   • lipid binding   • lysophosphatidic acid binding   • carbohydrate derivative binding   • bioactive lipid receptor activity   • molecular transducer activity   • G protein-coupled receptor activity   • transmembrane signaling receptor activity   • signaling receptor activity   • lysophosphatidic acid receptor activity   • protein binding   • G-protein alpha-subunit binding   • PDZ domain binding   • protein domain specific binding   • electron transport chain   • metabolic process   • cellular process   • generation of precursor metabolites and energy   • developmental process   • multicellular organism development   • multicellular organismal process   • nerve development   • cranial nerve development   • anatomical structure development   • optic nerve development   • nervous system development   • system development   • regulation of biological process
Gene OntologyBiological Process• electron transport chain   • metabolic process   • cellular process   • generation of precursor metabolites and energy   • developmental process   • multicellular organism development   • multicellular organismal process   • nerve development   • cranial nerve development   • anatomical structure development   • optic nerve development   • nervous system development   • system development   • regulation of biological process   • positive regulation of programmed cell death   • regulation of cellular process   • regulation of apoptotic process   • biological regulation   • positive regulation of biological process   • regulation of programmed cell death   • cell death   • positive regulation of apoptotic process   • apoptotic process   • programmed cell death   • positive regulation of cellular process   • head development   • animal organ development   • brain development   • cerebellum development   • central nervous system development   • metencephalon development   • hindbrain development   • regulation of developmental process   • cellular developmental process   • cell projection organization   • positive regulation of dendritic spine development   • cell development   • regulation of dendritic spine development   • neuron projection development   • cellular component organization   • positive regulation of developmental process   • neurogenesis   • neuron differentiation   • dendrite development   • cell differentiation   • cellular component organization or biogenesis   • dendritic spine development   • plasma membrane bounded cell projection organization   • generation of neurons   • neuron development   • regulation of neuron projection development   • regulation of cellular component organization   • negative regulation of biological process   • negative regulation of cellular process   • negative regulation of cell projection organization   • negative regulation of cellular component organization   • regulation of cell projection organization   • negative regulation of neuron projection development   • regulation of plasma membrane bounded cell projection organization   • regulation of metabolic process   • cell chemotaxis   • cellular response to stimulus   • chemotaxis   • response to stimulus   • response to external stimulus   • cellular response to chemical stimulus   • taxis   • response to chemical   • cell migration   • cell motility   • locomotion   • signaling   • phospholipase C-activating G protein-coupled receptor signaling pathway   • cell communication   • G protein-coupled receptor signaling pathway   • signal transduction   • regulation of localization   • cellular localization   • transport   • regulation of transport   • regulation of synaptic vesicle cycle   • synaptic vesicle cycle   • regulation of vesicle-mediated transport   • establishment of localization   • vesicle-mediated transport   • vesicle-mediated transport in synapse   • localization   • establishment of localization in cell   • import into cell   • receptor internalization   • postsynaptic neurotransmitter receptor internalization   • regulation of receptor internalization   • regulation of postsynaptic neurotransmitter receptor internalization   • regulation of biological quality   • regulation of endocytosis   • regulation of receptor-mediated endocytosis   • protein-containing complex localization   • neurotransmitter receptor internalization   • regulation of postsynaptic membrane neurotransmitter receptor levels   • postsynaptic endocytosis   • endocytosis   • receptor-mediated endocytosis   • corpus callosum development   • forebrain development   • telencephalon development   • positive regulation of cytosolic calcium ion concentration   • positive regulation of cell communication   • positive regulation of signal transduction   • positive regulation of canonical NF-kappaB signal transduction   • regulation of signal transduction   • intracellular signal transduction   • positive regulation of response to stimulus   • regulation of intracellular signal transduction   • intracellular signaling cassette   • regulation of signaling   • positive regulation of intracellular signal transduction   • canonical NF-kappaB signal transduction   • regulation of response to stimulus   • regulation of cell communication   • regulation of canonical NF-kappaB signal transduction   • positive regulation of signaling   • cellular component biogenesis   • bleb assembly   • cellular component assembly   • plasma membrane bounded cell projection assembly   • cell projection assembly   • small GTPase-mediated signal transduction   • regulation of small GTPase mediated signal transduction   • Rho protein signal transduction   • regulation of Rho protein signal transduction   • positive regulation of Rho protein signal transduction   • positive regulation of small GTPase mediated signal transduction   • positive regulation of locomotion   • regulation of cell motility   • positive regulation of smooth muscle cell chemotaxis   • regulation of smooth muscle cell chemotaxis   • regulation of response to external stimulus   • regulation of smooth muscle cell migration   • positive regulation of smooth muscle cell migration   • positive regulation of chemotaxis   • positive regulation of cell migration   • muscle cell migration   • positive regulation of response to external stimulus   • positive regulation of cell motility   • smooth muscle cell chemotaxis   • regulation of cell migration   • regulation of chemotaxis   • smooth muscle cell migration   • regulation of locomotion   • negative regulation of organelle assembly   • negative regulation of plasma membrane bounded cell projection assembly   • cilium assembly   • cilium organization   • organelle assembly   • regulation of cell projection assembly   • regulation of cellular component biogenesis   • regulation of organelle organization   • regulation of plasma membrane bounded cell projection assembly   • organelle organization   • regulation of cilium assembly   • negative regulation of organelle organization   • regulation of organelle assembly   • negative regulation of cilium assembly   • cellular response to oxygen levels   • response to oxygen levels   • response to abiotic stimulus   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • regulation of cell shape   • cell morphogenesis   • regulation of cell morphogenesis   • anatomical structure morphogenesis   • regulation of anatomical structure morphogenesis   • negative regulation of signaling   • negative regulation of intracellular signal transduction   • negative regulation of cAMP/PKA signal transduction   • negative regulation of cell communication   • cAMP/PKA signal transduction   • negative regulation of response to stimulus   • negative regulation of signal transduction   • regulation of cAMP/PKA signal transduction   • oligodendrocyte development   • glial cell development   • gliogenesis   • oligodendrocyte differentiation   • glial cell differentiation   • positive regulation of MAPK cascade   • regulation of MAPK cascade   • MAPK cascade   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • myelination   • axon ensheathment   • ensheathment of neurons   • response to lipid   • response to 1-oleoyl-sn-glycerol 3-phosphate   • response to organophosphorus   • response to oxygen-containing compound   • cellular response to oxygen-containing compound   • cellular response to lipid   • cellular response to 1-oleoyl-sn-glycerol 3-phosphate   • positive regulation of organelle organization   • regulation of cytoskeleton organization   • regulation of actin filament-based process   • positive regulation of cellular component organization   • regulation of actin filament bundle assembly   • positive regulation of actin filament bundle assembly   • actin filament bundle organization   • positive regulation of stress fiber assembly   • actin filament-based process   • stress fiber assembly   • regulation of actin filament organization   • actin cytoskeleton organization   • actomyosin structure organization   • positive regulation of cellular component biogenesis   • positive regulation of cytoskeleton organization   • actin filament organization   • positive regulation of supramolecular fiber organization   • regulation of stress fiber assembly   • contractile actin filament bundle assembly   • regulation of actomyosin structure organization   • regulation of actin cytoskeleton organization   • actin filament bundle assembly   • regulation of supramolecular fiber organization   • supramolecular fiber organization   • cytoskeleton organization   • cellular anatomical structure   • periplasmic space   • cell periphery   • postsynapse   • postsynaptic membrane   • synapse   • cell junction   • membrane   • plasma membrane   • plasma membrane region   • synaptic membrane   • presynapse   • presynaptic membrane   • intracellular anatomical structure
Gene OntologyCellular Component• cellular anatomical structure   • periplasmic space   • cell periphery   • postsynapse   • postsynaptic membrane   • synapse   • cell junction   • membrane   • plasma membrane   • plasma membrane region   • synaptic membrane   • presynapse   • presynaptic membrane   • intracellular anatomical structure   • cytoplasm   • glutamatergic synapse   • somatodendritic compartment   • cell projection   • dendrite   • dendritic tree   • neuron projection   • dendritic shaft   • plasma membrane bounded cell projection   • neuron spine   • dendritic spine   • cell body   • neuronal cell body   • cell surface   • GABA-ergic synapse   • membrane-bounded organelle   • endosome   • intracellular vesicle   • intracellular membrane-bounded organelle   • endomembrane system   • intracellular organelle   • cytoplasmic vesicle   • organelle   • vesicle   • D2 dopamine receptor binding   • protein binding   • binding   • signaling receptor binding   • G protein-coupled receptor binding   • dopamine receptor binding   • phosphorus-oxygen lyase activity   • enzyme regulator activity   • cyclase regulator activity   • molecular function regulator activity   • cyclase activity   • adenylate cyclase regulator activity   • lyase activity   • catalytic activity   • adenylate cyclase activity   • guanyl nucleotide binding   • GTP binding   • nucleotide binding   • guanyl ribonucleotide binding   • purine ribonucleotide binding   • purine ribonucleoside triphosphate binding   • nucleoside phosphate binding   • ion binding   • purine nucleotide binding   • anion binding   • heterocyclic compound binding   • carbohydrate derivative binding   • ribonucleotide binding   • small molecule binding   • cation binding   • magnesium ion binding   • metal ion binding   • GDP binding   • G protein-coupled serotonin receptor binding   • protein-containing complex binding   • G-protein beta/gamma-subunit complex binding   • pyrophosphatase activity   • GTPase activity   • G protein activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • cell communication   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction   • response to hormone   • response to chemical   • response to endogenous stimulus   • response to peptide hormone   • response to oxygen-containing compound   • response to nitrogen compound   • cell division   • leukocyte migration   • immune system process   • mononuclear cell migration   • lymphocyte migration   • cell migration   • T cell migration   • cell motility   • regulation of steroid biosynthetic process   • regulation of cholesterol biosynthetic process   • regulation of cholesterol metabolic process   • steroid metabolic process   • regulation of lipid metabolic process   • sterol metabolic process   • positive regulation of biological process   • cholesterol metabolic process   • lipid biosynthetic process   • alcohol metabolic process   • regulation of primary metabolic process   • positive regulation of metabolic process   • regulation of small molecule metabolic process   • positive regulation of biosynthetic process   • positive regulation of lipid metabolic process   • small molecule metabolic process   • steroid biosynthetic process   • positive regulation of cellular process   • regulation of biosynthetic process   • secondary alcohol biosynthetic process   • regulation of alcohol biosynthetic process   • small molecule biosynthetic process   • regulation of steroid metabolic process   • cholesterol biosynthetic process   • positive regulation of cholesterol biosynthetic process   • primary metabolic process   • secondary alcohol metabolic process   • positive regulation of steroid biosynthetic process   • biosynthetic process   • sterol biosynthetic process   • positive regulation of lipid biosynthetic process   • regulation of sterol biosynthetic process   • alcohol biosynthetic process   • positive regulation of cholesterol metabolic process   • positive regulation of steroid metabolic process   • metabolic process   • regulation of lipid biosynthetic process   • positive regulation of small molecule metabolic process   • regulation of metabolic process   • positive regulation of alcohol biosynthetic process   • positive regulation of sterol biosynthetic process   • lipid metabolic process   • regulation of cytoskeleton organization   • regulation of cellular component organization   • microtubule cytoskeleton organization   • regulation of mitotic spindle organization   • mitotic cell cycle   • cellular component organization   • cell cycle   • cellular component organization or biogenesis   • regulation of cell cycle   • microtubule cytoskeleton organization involved in mitosis   • spindle organization   • cell cycle process   • regulation of cell cycle process   • regulation of microtubule-based process   • regulation of spindle organization   • regulation of organelle organization   • mitotic spindle organization   • organelle organization   • mitotic cell cycle process   • microtubule-based process   • cytoskeleton organization   • regulation of microtubule cytoskeleton organization   • protein localization   • positive regulation of protein localization to cell periphery   • regulation of localization   • protein localization to cell periphery   • cellular localization   • regulation of protein localization   • positive regulation of protein localization to cell cortex   • regulation of protein localization to cell periphery   • localization   • regulation of cellular localization   • regulation of protein localization to cell cortex   • cellular macromolecule localization   • macromolecule localization   • positive regulation of protein localization   • protein localization to cell cortex   • response to ketone   • response to prostaglandin   • response to lipid   • response to alcohol   • response to prostaglandin E   • cellular response to forskolin   • cellular response to oxygen-containing compound   • cellular response to chemical stimulus   • cellular response to alcohol   • response to forskolin   • cellular response to lipid   • cellular response to ketone   • midbody   • nucleus   • membrane-enclosed lumen   • intracellular membraneless organelle   • nucleolus   • intracellular organelle lumen   • organelle lumen   • membraneless organelle   • nuclear lumen   • cell cortex   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cytoplasmic side of plasma membrane   • GTPase complex   • extrinsic component of membrane   • extrinsic component of cytoplasmic side of plasma membrane   • extracellular exosome   • extracellular vesicle   • extracellular organelle   • extracellular region   • extracellular space   • extracellular membrane-bounded organelle   • centrosome   • microtubule organizing center   • cytoskeleton   • microtubule cytoskeleton   • centriolar satellite   • cytosol   • nucleoplasm   • vacuolar membrane   • lytic vacuole   • vacuole   • lytic vacuole membrane   • bounding membrane of organelle   • lysosomal membrane   • organelle membrane   • lysosome   • Golgi apparatus   • cilium   • ciliary basal body   • enzyme binding   • GTPase binding   • signaling receptor complex adaptor activity   • protein-macromolecule adaptor activity   • molecular adaptor activity   • signaling adaptor activity   • multicellular organismal process   • system process   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of taste   • developmental process   • sensory organ development   • eye development   • animal organ development   • retina development in camera-type eye   • visual system development   • multicellular organism development   • camera-type eye development   • anatomical structure development   • sensory system development   • system development   • cell population proliferation   • cellular response to prostaglandin stimulus   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to hormone stimulus   • small GTPase-mediated signal transduction   • Ras protein signal transduction   • intracellular signal transduction   • intracellular signaling cassette   • phospholipase C-activating G protein-coupled receptor signaling pathway   • cellular response to nitrogen compound   • response to dopamine   • cellular response to dopamine   • response to monoamine   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • G protein-coupled dopamine receptor signaling pathway   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cellular response to monoamine stimulus   • synaptic signaling   • cellular response to acetylcholine   • cell-cell signaling   • acetylcholine receptor signaling pathway   • postsynaptic signal transduction   • G protein-coupled acetylcholine receptor signaling pathway   • response to acetylcholine   • non-motile cilium   • 9+0 non-motile cilium   • photoreceptor disc membrane   • photoreceptor outer segment   • photoreceptor cell cilium   • G-protein beta-subunit binding   • fibroblast proliferation
SCOP2Domain Identifier• G protein-coupled receptor-like   • Ras-like P-loop GTPases   • Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• G protein-coupled receptor-like   • Ras-like P-loop GTPases   • Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeNKP
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodeNKP
Name(2R)-2-hydroxy-3-(phosphonooxy)propyl (9E)-octadec-9-enoate
Synonyms18:1 LPA; oleoyl lysophosphatidic acid
Identifier
FormulaC21 H41 O7 P
Molecular Weight436.52
SMILES
PubChem49837858
Formal Charge0
Total Atoms70
Total Chiral Atoms1
Total Bonds69
Total Aromatic Bonds0

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtQ92633
Sequence
>9IZF_nogp_Chain_R
SIAFFYNRS GKHLATEWN TVSKLVMGL GITVCIFIM LANLLVMVA 
IYVNRRFHF PIYYLMANL AAADFFAGL AYFYLMFNT GPNTRRLTV 
STWLLRQGL IDTSLTASV ANLLAIAIE RHITVFRMQ LHTRMSNRR 
VVVVIVVIW TMAIVMGAI PSVGWNCIC DIENCSNMA PLYSDSYLV 
FWAIFNLVT FVVMVVLYA HIFGYVRQR TMRMSRHDT MMSLLKTVV 
IVLGAFIIC WTPGLVLLL LDVCCPQCD VLAYEKFFL LLAEFNSAM 
NPIIYSYRD KEMSATFRQ ILC


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
9IZGALipidLysophospholipidLPA1Homo sapiensNKP-chim(NtGi1-Gs-CtGq)/β1/γ23.042025-01-0110.1016/j.jsb.2024.108164
9IZG (No Gprot) ALipidLysophospholipidLPA1Homo sapiensNKP-3.042025-01-0110.1016/j.jsb.2024.108164
9IZHALipidLysophospholipidLPA1Homo sapiensLPA-chim(NtGi2-G13)/β1/γ23.042025-01-01doi.org/10.1016/j.jsb.2024.108164
9IZH (No Gprot) ALipidLysophospholipidLPA1Homo sapiensLPA-3.042025-01-01doi.org/10.1016/j.jsb.2024.108164
9J5VALipidLysophospholipidLPA1Homo sapiensCpY-Gi1/β1/γ22.862024-11-2710.1038/s42003-024-07152-y
9J5V (No Gprot) ALipidLysophospholipidLPA1Homo sapiensCpY-2.862024-11-2710.1038/s42003-024-07152-y
9IZFALipidLysophospholipidLPA1Homo sapiensNKP-Gi1/β1/γ23.142025-01-0110.1016/j.jsb.2024.108164
9IZF (No Gprot) ALipidLysophospholipidLPA1Homo sapiensNKP-3.142025-01-0110.1016/j.jsb.2024.108164
7YU4ALipidLysophospholipidLPA1Homo sapiensONO-0740556--3.72022-10-0510.1038/s41467-022-33121-2
7YU8ALipidLysophospholipidLPA1Homo sapiensONO-0740556-Gi1/β1/γ25.62022-10-0510.1038/s41467-022-33121-2
7YU8 (No Gprot) ALipidLysophospholipidLPA1Homo sapiensONO-0740556-5.62022-10-0510.1038/s41467-022-33121-2
7YU7ALipidLysophospholipidLPA1Homo sapiensONO-0740556-Gi1/β1/γ24.52022-10-0510.1038/s41467-022-33121-2
7YU7 (No Gprot) ALipidLysophospholipidLPA1Homo sapiensONO-0740556-4.52022-10-0510.1038/s41467-022-33121-2
7YU6ALipidLysophospholipidLPA1Homo sapiensONO-0740556-Gi1/β1/γ23.92022-10-0510.1038/s41467-022-33121-2
7YU6 (No Gprot) ALipidLysophospholipidLPA1Homo sapiensONO-0740556-3.92022-10-0510.1038/s41467-022-33121-2
7YU5ALipidLysophospholipidLPA1Homo sapiensONO-0740556-Gi1/β1/γ23.72022-10-0510.1038/s41467-022-33121-2
7YU5 (No Gprot) ALipidLysophospholipidLPA1Homo sapiensONO-0740556-3.72022-10-0510.1038/s41467-022-33121-2
7YU3ALipidLysophospholipidLPA1Homo sapiensONO-0740556-Gi1/β1/γ23.52022-10-0510.1038/s41467-022-33121-2
7YU3 (No Gprot) ALipidLysophospholipidLPA1Homo sapiensONO-0740556-3.52022-10-0510.1038/s41467-022-33121-2
7TD2ALipidLysophospholipidLPA1Homo sapiensLPA-Gi1/β1/γ23.112022-02-0910.1038/s41467-022-28417-2
7TD2 (No Gprot) ALipidLysophospholipidLPA1Homo sapiensLPA-3.112022-02-0910.1038/s41467-022-28417-2
7TD1ALipidLysophospholipidLPA1Homo sapiensLPA-Gi1/β1/γ23.082022-02-0910.1038/s41467-022-28417-2
7TD1 (No Gprot) ALipidLysophospholipidLPA1Homo sapiensLPA-3.082022-02-0910.1038/s41467-022-28417-2
7TD0ALipidLysophospholipidLPA1Homo sapiensLPA-Gi1/β1/γ22.832022-02-0910.1038/s41467-022-28417-2
7TD0 (No Gprot) ALipidLysophospholipidLPA1Homo sapiensLPA-2.832022-02-0910.1038/s41467-022-28417-2
4Z36ALipidLysophospholipidLPA1Homo sapiensONO-3080573--2.92015-06-0310.1016/j.cell.2015.06.002
4Z35ALipidLysophospholipidLPA1Homo sapiensONO-9910539--2.92015-06-0310.1016/j.cell.2015.06.002
4Z34ALipidLysophospholipidLPA1Homo sapiensONO-9780307--32015-06-0310.1016/j.cell.2015.06.002




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Download 9IZF_nogp.zip



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