Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:?1 7.632861410
2R:R:Y34 7.03286716
3R:R:K39 8.4825418
4R:R:W45 5.75401
5R:R:I57 2.4425404
6R:R:I63 3.8025408
7R:R:N67 5.955409
8R:R:F80 9.978528
9R:R:Y85 6.69333629
10R:R:D95 6.156509
11R:R:Y102 7.11857707
12R:R:T113 5.315415
13R:R:W121 8.1725419
14R:R:R124 4.81406
15R:R:D129 6.98415
16R:R:L132 4.882507
17R:R:T133 4.3425416
18R:R:E145 6.595408
19R:R:H147 6.4425467
20R:R:F151 9.3275466
21R:R:V164 3.1225407
22R:R:P182 7.615416
23R:R:M198 8.335473
24R:R:Y202 6.95833614
25R:R:Y206 7.254517
26R:R:W210 7.784516
27R:R:N214 6.7175417
28R:R:T217 4.09547
29R:R:F218 5.62405
30R:R:F229 5.392586
31R:R:F267 7.56419
32R:R:W271 8.085618
33R:R:F296 5.754505
34R:R:Y311 5.844559
35R:R:M318 6.7825428
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:?1 R:R:Y34 19.35345.87YesYes106
2R:R:W121 R:R:Y34 12.90785.79YesYes196
3R:R:L201 R:R:W121 23.11111.39NoYes019
4R:R:L201 R:R:V118 19.32524.47NoNo012
5L:L:?1 R:R:Q125 18.018414.29YesNo104
6R:R:Q125 R:R:W121 11.84348.76NoYes149
7L:L:?1 R:R:K39 23.234112.11YesYes108
8R:R:E293 R:R:K39 22.3719.45NoYes048
9R:R:E293 R:R:M198 21.393817.59NoYes043
10L:L:?1 R:R:T109 14.136.33YesNo105
11R:R:G110 R:R:T109 13.16945.46NoNo155
12R:R:G110 R:R:P111 25.09114.06NoNo054
13R:R:P111 R:R:W45 20.9184.05NoYes041
14L:L:?1 R:R:T113 14.05059.49YesYes105
15R:R:G110 R:R:T113 14.0033.64NoYes155
16R:R:M53 R:R:W45 14.63913.49NoYes041
17R:R:F107 R:R:M53 12.64116.22NoNo054
18R:R:F103 R:R:F107 10.54046.43NoNo065
19L:L:?1 R:R:L132 37.39873.96YesYes007
20R:R:L132 R:R:W271 41.21527.97YesYes078
21R:R:N303 R:R:W271 10010.17NoYes098
22R:R:N303 R:R:N307 98.6155.45NoNo099
23R:R:D95 R:R:N307 54.22826.73YesNo099
24R:R:D95 R:R:N67 11.4926.73YesYes099
25L:L:?1 R:R:W210 45.443516.3YesYes106
26R:R:W210 R:R:W271 37.42827.5YesYes168
27L:L:?1 R:R:A300 35.61743.38YesNo007
28R:R:A300 R:R:W271 35.70975.19NoYes078
29R:R:D95 R:R:L91 38.92354.07YesNo099
30R:R:L91 R:R:N138 74.70388.24NoNo098
31R:R:N138 R:R:N90 62.61812.26NoNo089
32R:R:I168 R:R:N90 57.3249.91NoNo089
33R:R:I168 R:R:V164 55.99933.07NoYes087
34R:R:P83 R:R:V164 44.11615.3NoYes067
35R:R:F82 R:R:P83 31.8884.33NoNo076
36R:R:F82 R:R:Y85 30.50683.09NoYes079
37R:R:F80 R:R:Y85 17.065521.66YesYes289
38R:R:F80 R:R:N77 11.48943.62YesNo086
39R:R:L139 R:R:N307 44.71896.87NoNo089
40R:R:L139 R:R:L91 37.87834.15NoNo089
41R:R:E145 R:R:P83 10.8794.72YesNo086
42L:L:?1 R:R:Y206 17.2224.19YesYes107
43R:R:F267 R:R:W271 35.722512.03YesYes198
44R:R:F267 R:R:M221 38.25153.73YesNo099
45R:R:M221 R:R:T217 37.41663.01NoYes097
46R:R:I171 R:R:N138 11.17017.08NoNo078
47R:R:L140 R:R:T217 34.51325.9NoYes077
48R:R:L140 R:R:V220 31.07242.98NoNo075
49R:R:L224 R:R:V220 30.19262.98NoNo065
50R:R:H147 R:R:L224 29.31033.86YesNo076
51R:R:F151 R:R:H147 15.53686.79YesYes667
52R:R:H147 R:R:I228 11.97047.95YesNo079
53R:R:F151 R:R:V150 11.06493.93YesNo068
54R:R:I228 R:R:V150 11.05853.07NoNo098
55R:R:A199 R:R:Y202 14.2484NoYes044
56R:R:A199 R:R:S196 12.2643.42NoNo045
57R:R:D204 R:R:S196 11.21632.94NoNo045
58R:R:L277 R:R:M198 12.05885.65NoYes743
59R:R:V150 R:R:V232 20.26781.6NoNo087
60R:R:L256 R:R:V232 16.63854.47NoNo077
61R:R:F229 R:R:L256 14.92253.65YesNo067
62R:R:F296 R:R:L277 11.01369.74YesNo054
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:?1 R:R:Y34 5.87 1 Yes Yes 0 6 0 1
L:L:?1 R:R:K39 12.11 1 Yes Yes 0 8 0 1
L:L:?1 R:R:T109 6.33 1 Yes No 0 5 0 1
L:L:?1 R:R:T113 9.49 1 Yes Yes 0 5 0 1
L:L:?1 R:R:R124 5.22 1 Yes Yes 0 6 0 1
L:L:?1 R:R:Q125 14.29 1 Yes No 0 4 0 1
L:L:?1 R:R:D129 6.8 1 Yes Yes 0 5 0 1
L:L:?1 R:R:L132 3.96 1 Yes Yes 0 7 0 1
L:L:?1 R:R:Y206 4.19 1 Yes Yes 0 7 0 1
L:L:?1 R:R:W210 16.3 1 Yes Yes 0 6 0 1
L:L:?1 R:R:L278 4.95 1 Yes No 0 6 0 1
L:L:?1 R:R:K294 6.05 1 Yes No 0 4 0 1
L:L:?1 R:R:L297 7.92 1 Yes No 0 6 0 1
L:L:?1 R:R:A300 3.38 1 Yes No 0 7 0 1
R:R:I30 R:R:Y34 6.04 0 No Yes 6 6 2 1
R:R:K39 R:R:Y34 9.55 1 Yes Yes 8 6 1 1
R:R:L41 R:R:Y34 5.86 0 No Yes 2 6 2 1
R:R:T113 R:R:Y34 4.99 1 Yes Yes 5 6 1 1
R:R:W121 R:R:Y34 5.79 1 Yes Yes 9 6 2 1
R:R:P200 R:R:Y34 11.13 0 No Yes 6 6 2 1
R:R:E293 R:R:K39 9.45 0 No Yes 4 8 2 1
R:R:L105 R:R:Y102 3.52 0 No Yes 6 7 2 2
R:R:L297 R:R:Y102 10.55 0 No Yes 6 7 1 2
R:R:E301 R:R:Y102 17.96 0 No Yes 7 7 2 2
R:R:R124 R:R:Y104 3.09 0 Yes No 6 5 1 2
R:R:L105 R:R:R124 7.29 0 No Yes 6 6 2 1
R:R:G110 R:R:T109 5.46 1 No No 5 5 2 1
R:R:T109 R:R:T113 3.14 1 No Yes 5 5 1 1
R:R:G110 R:R:T113 3.64 1 No Yes 5 5 2 1
R:R:L116 R:R:R124 3.64 0 No Yes 6 6 2 1
R:R:Q125 R:R:W121 8.76 1 No Yes 4 9 1 2
R:R:W121 R:R:Y202 6.75 1 Yes Yes 9 4 2 2
R:R:Q125 R:R:Y202 10.15 1 No Yes 4 4 1 2
R:R:D129 R:R:G126 5.03 1 Yes No 5 6 1 2
R:R:D129 R:R:Y202 5.75 1 Yes Yes 5 4 1 2
R:R:D129 R:R:Y206 10.34 1 Yes Yes 5 7 1 1
R:R:L132 R:R:W271 7.97 0 Yes Yes 7 8 1 2
R:R:E301 R:R:L132 6.63 0 No Yes 7 7 2 1
R:R:M178 R:R:T133 6.02 1 No Yes 5 6 2 2
R:R:T133 R:R:W210 4.85 1 Yes Yes 6 6 2 1
R:R:M178 R:R:W210 3.49 1 No Yes 5 6 2 1
R:R:P182 R:R:Y202 11.13 1 Yes Yes 6 4 2 2
R:R:P182 R:R:Y206 13.91 1 Yes Yes 6 7 2 1
R:R:W186 R:R:Y206 3.86 0 No Yes 6 7 2 1
R:R:Y202 R:R:Y206 3.97 1 Yes Yes 4 7 2 1
R:R:L207 R:R:L278 5.54 0 No No 6 6 2 1
R:R:N214 R:R:W210 6.78 1 Yes Yes 7 6 2 1
R:R:W210 R:R:W271 7.5 1 Yes Yes 6 8 1 2
R:R:N214 R:R:W271 5.65 1 Yes Yes 7 8 2 2
R:R:A300 R:R:W271 5.19 0 No Yes 7 8 1 2
R:R:L132 R:R:S131 3 0 Yes No 7 6 1 2
R:R:I128 R:R:L132 2.85 0 No Yes 6 7 2 1
R:R:K39 R:R:L290 2.82 1 Yes No 8 3 1 2
R:R:K294 R:R:V52 1.52 0 No No 4 5 1 2

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 7TD2_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3.07
Number of Linked Nodes 276
Number of Links 307
Number of Hubs 35
Number of Links mediated by Hubs 140
Number of Communities 8
Number of Nodes involved in Communities 42
Number of Links involved in Communities 56
Path Summary
Number Of Nodes in MetaPath 63
Number Of Links MetaPath 62
Number of Shortest Paths 125036
Length Of Smallest Path 3
Average Path Length 15.6351
Length of Longest Path 34
Minimum Path Strength 1.315
Average Path Strength 6.47791
Maximum Path Strength 18.945
Minimum Path Correlation 0.7
Average Path Correlation 0.932492
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 3.84615
Average % Of Corr. Nodes 49.0657
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 38.2892
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function• binding   • ion binding   • anion binding   • phospholipid binding   • lipid binding   • lysophosphatidic acid binding   • carbohydrate derivative binding   • small molecule binding   • bioactive lipid receptor activity   • molecular transducer activity   • G protein-coupled receptor activity   • transmembrane signaling receptor activity   • signaling receptor activity   • lysophosphatidic acid receptor activity   • protein binding   • G-protein alpha-subunit binding   • PDZ domain binding   • protein domain specific binding   • developmental process   • multicellular organism development   • multicellular organismal process   • nerve development   • cranial nerve development   • anatomical structure development   • optic nerve development   • nervous system development   • system development   • regulation of biological process   • positive regulation of programmed cell death   • regulation of cellular process   • regulation of apoptotic process   • biological regulation
Gene OntologyBiological Process• developmental process   • multicellular organism development   • multicellular organismal process   • nerve development   • cranial nerve development   • anatomical structure development   • optic nerve development   • nervous system development   • system development   • regulation of biological process   • positive regulation of programmed cell death   • regulation of cellular process   • regulation of apoptotic process   • biological regulation   • positive regulation of biological process   • regulation of programmed cell death   • cell death   • positive regulation of apoptotic process   • cellular process   • apoptotic process   • programmed cell death   • positive regulation of cellular process   • head development   • animal organ development   • brain development   • cerebellum development   • central nervous system development   • metencephalon development   • hindbrain development   • regulation of developmental process   • cellular developmental process   • cell projection organization   • positive regulation of dendritic spine development   • cell development   • regulation of dendritic spine development   • neuron projection development   • cellular component organization   • positive regulation of developmental process   • neurogenesis   • neuron differentiation   • dendrite development   • cell differentiation   • cellular component organization or biogenesis   • dendritic spine development   • plasma membrane bounded cell projection organization   • generation of neurons   • neuron development   • regulation of neuron projection development   • regulation of cellular component organization   • negative regulation of biological process   • negative regulation of cellular process   • negative regulation of cell projection organization   • negative regulation of cellular component organization   • regulation of cell projection organization   • negative regulation of neuron projection development   • regulation of plasma membrane bounded cell projection organization   • metabolic process   • regulation of metabolic process   • cell chemotaxis   • cellular response to stimulus   • chemotaxis   • response to stimulus   • response to external stimulus   • cellular response to chemical stimulus   • taxis   • response to chemical   • cell migration   • cell motility   • locomotion   • signaling   • phospholipase C-activating G protein-coupled receptor signaling pathway   • cell communication   • G protein-coupled receptor signaling pathway   • signal transduction   • regulation of localization   • cellular localization   • transport   • regulation of transport   • regulation of synaptic vesicle cycle   • synaptic vesicle cycle   • regulation of vesicle-mediated transport   • establishment of localization   • vesicle-mediated transport   • vesicle-mediated transport in synapse   • localization   • establishment of localization in cell   • import into cell   • receptor internalization   • postsynaptic neurotransmitter receptor internalization   • regulation of receptor internalization   • regulation of postsynaptic neurotransmitter receptor internalization   • regulation of biological quality   • regulation of endocytosis   • regulation of receptor-mediated endocytosis   • protein-containing complex localization   • neurotransmitter receptor internalization   • regulation of postsynaptic membrane neurotransmitter receptor levels   • postsynaptic endocytosis   • endocytosis   • receptor-mediated endocytosis   • corpus callosum development   • forebrain development   • telencephalon development   • positive regulation of cytosolic calcium ion concentration   • positive regulation of cell communication   • positive regulation of signal transduction   • positive regulation of canonical NF-kappaB signal transduction   • regulation of signal transduction   • intracellular signal transduction   • positive regulation of response to stimulus   • regulation of intracellular signal transduction   • intracellular signaling cassette   • regulation of signaling   • positive regulation of intracellular signal transduction   • canonical NF-kappaB signal transduction   • regulation of response to stimulus   • regulation of cell communication   • regulation of canonical NF-kappaB signal transduction   • positive regulation of signaling   • cellular component biogenesis   • bleb assembly   • cellular component assembly   • plasma membrane bounded cell projection assembly   • cell projection assembly   • small GTPase-mediated signal transduction   • regulation of small GTPase mediated signal transduction   • Rho protein signal transduction   • regulation of Rho protein signal transduction   • positive regulation of Rho protein signal transduction   • positive regulation of small GTPase mediated signal transduction   • positive regulation of locomotion   • regulation of cell motility   • positive regulation of smooth muscle cell chemotaxis   • regulation of smooth muscle cell chemotaxis   • regulation of response to external stimulus   • regulation of smooth muscle cell migration   • positive regulation of smooth muscle cell migration   • positive regulation of chemotaxis   • positive regulation of cell migration   • muscle cell migration   • positive regulation of response to external stimulus   • positive regulation of cell motility   • smooth muscle cell chemotaxis   • regulation of cell migration   • regulation of chemotaxis   • smooth muscle cell migration   • regulation of locomotion   • negative regulation of organelle assembly   • negative regulation of plasma membrane bounded cell projection assembly   • cilium assembly   • cilium organization   • organelle assembly   • regulation of cell projection assembly   • regulation of cellular component biogenesis   • regulation of organelle organization   • regulation of plasma membrane bounded cell projection assembly   • organelle organization   • regulation of cilium assembly   • negative regulation of organelle organization   • regulation of organelle assembly   • negative regulation of cilium assembly   • cellular response to oxygen levels   • response to oxygen levels   • response to abiotic stimulus   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • regulation of cell shape   • cell morphogenesis   • regulation of cell morphogenesis   • anatomical structure morphogenesis   • regulation of anatomical structure morphogenesis   • negative regulation of signaling   • negative regulation of intracellular signal transduction   • negative regulation of cAMP/PKA signal transduction   • negative regulation of cell communication   • cAMP/PKA signal transduction   • negative regulation of response to stimulus   • negative regulation of signal transduction   • regulation of cAMP/PKA signal transduction   • oligodendrocyte development   • glial cell development   • gliogenesis   • oligodendrocyte differentiation   • glial cell differentiation   • positive regulation of MAPK cascade   • regulation of MAPK cascade   • MAPK cascade   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • myelination   • axon ensheathment   • ensheathment of neurons   • response to lipid   • response to 1-oleoyl-sn-glycerol 3-phosphate   • response to organophosphorus   • response to oxygen-containing compound   • cellular response to oxygen-containing compound   • cellular response to lipid   • cellular response to 1-oleoyl-sn-glycerol 3-phosphate   • positive regulation of organelle organization   • regulation of cytoskeleton organization   • regulation of actin filament-based process   • positive regulation of cellular component organization   • regulation of actin filament bundle assembly   • positive regulation of actin filament bundle assembly   • actin filament bundle organization   • positive regulation of stress fiber assembly   • actin filament-based process   • stress fiber assembly   • regulation of actin filament organization   • actin cytoskeleton organization   • actomyosin structure organization   • positive regulation of cellular component biogenesis   • positive regulation of cytoskeleton organization   • actin filament organization   • positive regulation of supramolecular fiber organization   • regulation of stress fiber assembly   • contractile actin filament bundle assembly   • regulation of actomyosin structure organization   • regulation of actin cytoskeleton organization   • actin filament bundle assembly   • regulation of supramolecular fiber organization   • supramolecular fiber organization   • cytoskeleton organization   • cell periphery   • postsynapse   • cellular anatomical structure   • postsynaptic membrane   • synapse   • cell junction   • membrane   • plasma membrane   • plasma membrane region   • synaptic membrane   • presynapse   • presynaptic membrane   • intracellular anatomical structure   • cytoplasm
Gene OntologyCellular Component• cell periphery   • postsynapse   • cellular anatomical structure   • postsynaptic membrane   • synapse   • cell junction   • membrane   • plasma membrane   • plasma membrane region   • synaptic membrane   • presynapse   • presynaptic membrane   • intracellular anatomical structure   • cytoplasm   • glutamatergic synapse   • somatodendritic compartment   • cell projection   • dendrite   • dendritic tree   • neuron projection   • dendritic shaft   • plasma membrane bounded cell projection   • neuron spine   • dendritic spine   • cell body   • neuronal cell body   • cell surface   • GABA-ergic synapse   • membrane-bounded organelle   • endosome   • intracellular vesicle   • intracellular membrane-bounded organelle   • endomembrane system   • intracellular organelle   • cytoplasmic vesicle   • organelle   • vesicle   • protein-containing complex binding   • binding   • protein binding   • enzyme binding   • GTPase binding   • pyrophosphatase activity   • GTPase activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • signaling receptor complex adaptor activity   • protein-macromolecule adaptor activity   • molecular adaptor activity   • signaling adaptor activity   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • phospholipase C-activating G protein-coupled receptor signaling pathway   • cell communication   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction   • multicellular organismal process   • system process   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of taste   • developmental process   • sensory organ development   • eye development   • animal organ development   • retina development in camera-type eye   • visual system development   • multicellular organism development   • camera-type eye development   • anatomical structure development   • sensory system development   • system development   • cell population proliferation   • cellular response to nitrogen compound   • response to dopamine   • cellular response to dopamine   • response to monoamine   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • G protein-coupled dopamine receptor signaling pathway   • response to oxygen-containing compound   • response to nitrogen compound   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cellular response to oxygen-containing compound   • cellular response to chemical stimulus   • cellular response to monoamine stimulus   • response to chemical   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • response to ketone   • response to prostaglandin   • response to lipid   • response to endogenous stimulus   • response to alcohol   • cellular response to prostaglandin stimulus   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to alcohol   • response to hormone   • cellular response to lipid   • response to prostaglandin E   • cellular response to ketone   • cellular response to hormone stimulus   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cytoplasmic side of plasma membrane   • GTPase complex   • extrinsic component of membrane   • extrinsic component of cytoplasmic side of plasma membrane   • non-motile cilium   • 9+0 non-motile cilium   • cilium   • photoreceptor disc membrane   • photoreceptor outer segment   • photoreceptor cell cilium   • organelle membrane   • D2 dopamine receptor binding   • signaling receptor binding   • G protein-coupled receptor binding   • dopamine receptor binding   • phosphorus-oxygen lyase activity   • enzyme regulator activity   • cyclase regulator activity   • molecular function regulator activity   • cyclase activity   • adenylate cyclase regulator activity   • lyase activity   • adenylate cyclase activity   • GTPase activating protein binding   • guanyl nucleotide binding   • GTP binding   • nucleotide binding   • guanyl ribonucleotide binding   • purine ribonucleotide binding   • purine ribonucleoside triphosphate binding   • nucleoside phosphate binding   • ion binding   • purine nucleotide binding   • anion binding   • heterocyclic compound binding   • carbohydrate derivative binding   • ribonucleotide binding   • small molecule binding   • cation binding   • magnesium ion binding   • metal ion binding   • GDP binding   • G protein-coupled serotonin receptor binding   • G-protein beta/gamma-subunit complex binding   • G protein activity   • protein localization   • protein localization to postsynaptic specialization membrane   • cellular localization   • protein localization to postsynaptic membrane   • protein localization to cell periphery   • protein localization to synapse   • localization within membrane   • protein localization to membrane   • protein-containing complex localization   • neurotransmitter receptor localization to postsynaptic specialization membrane   • localization   • regulation of postsynaptic membrane neurotransmitter receptor levels   • protein localization to organelle   • cellular macromolecule localization   • macromolecule localization   • protein localization to postsynapse   • regulation of biological quality   • protein localization to cell junction   • receptor localization to synapse   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • cell division   • leukocyte migration   • immune system process   • mononuclear cell migration   • lymphocyte migration   • cell migration   • T cell migration   • cell motility   • regulation of steroid biosynthetic process   • regulation of cholesterol biosynthetic process   • regulation of cholesterol metabolic process   • steroid metabolic process   • regulation of lipid metabolic process   • sterol metabolic process   • positive regulation of biological process   • cholesterol metabolic process   • lipid biosynthetic process   • alcohol metabolic process   • regulation of primary metabolic process   • positive regulation of metabolic process   • regulation of small molecule metabolic process   • positive regulation of biosynthetic process   • positive regulation of lipid metabolic process   • small molecule metabolic process   • steroid biosynthetic process   • positive regulation of cellular process   • regulation of biosynthetic process   • secondary alcohol biosynthetic process   • regulation of alcohol biosynthetic process   • small molecule biosynthetic process   • regulation of steroid metabolic process   • cholesterol biosynthetic process   • positive regulation of cholesterol biosynthetic process   • primary metabolic process   • secondary alcohol metabolic process   • positive regulation of steroid biosynthetic process   • biosynthetic process   • sterol biosynthetic process   • positive regulation of lipid biosynthetic process   • regulation of sterol biosynthetic process   • alcohol biosynthetic process   • positive regulation of cholesterol metabolic process   • positive regulation of steroid metabolic process   • metabolic process   • regulation of lipid biosynthetic process   • positive regulation of small molecule metabolic process   • regulation of metabolic process   • positive regulation of alcohol biosynthetic process   • positive regulation of sterol biosynthetic process   • lipid metabolic process   • regulation of cytoskeleton organization   • regulation of cellular component organization   • microtubule cytoskeleton organization   • regulation of mitotic spindle organization   • mitotic cell cycle   • cellular component organization   • cell cycle   • cellular component organization or biogenesis   • regulation of cell cycle   • microtubule cytoskeleton organization involved in mitosis   • spindle organization   • cell cycle process   • regulation of cell cycle process   • regulation of microtubule-based process   • regulation of spindle organization   • regulation of organelle organization   • mitotic spindle organization   • organelle organization   • mitotic cell cycle process   • microtubule-based process   • cytoskeleton organization   • regulation of microtubule cytoskeleton organization   • positive regulation of protein localization to cell periphery   • regulation of localization   • regulation of protein localization   • positive regulation of protein localization to cell cortex   • regulation of protein localization to cell periphery   • regulation of cellular localization   • regulation of protein localization to cell cortex   • positive regulation of protein localization   • protein localization to cell cortex   • trans-synaptic signaling   • regulation of signaling   • negative regulation of signaling   • modulation of chemical synaptic transmission   • negative regulation of biological process   • cell-cell signaling   • negative regulation of synaptic transmission   • negative regulation of cell communication   • chemical synaptic transmission   • synaptic signaling   • regulation of trans-synaptic signaling   • anterograde trans-synaptic signaling   • negative regulation of cellular process   • regulation of cell communication   • cellular response to forskolin   • response to forskolin   • midbody   • cell cortex   • centrosome   • microtubule organizing center   • cytoskeleton   • membraneless organelle   • intracellular membraneless organelle   • microtubule cytoskeleton   • cytosol   • nucleus   • G-protein beta-subunit binding
SCOP2Domain Identifier• G protein-coupled receptor-like   • WD40 repeat-like   • Ras-like P-loop GTPases   • Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• G protein-coupled receptor-like   • WD40 repeat-like   • Ras-like P-loop GTPases   • Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeNKP
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodeNKP
Name(2R)-2-hydroxy-3-(phosphonooxy)propyl (9E)-octadec-9-enoate
Synonyms18:1 LPA; oleoyl lysophosphatidic acid
Identifier
FormulaC21 H41 O7 P
Molecular Weight436.52
SMILES
PubChem49837858
Formal Charge0
Total Atoms70
Total Chiral Atoms1
Total Bonds69
Total Aromatic Bonds0

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtQ92633
Sequence
>7TD2_nogp_Chain_R
QCFYNESIA FFYNRSGKH LATEWNTVS KLVMGLGIT VCIFIMLAN 
LLVMVAIYV NRRFHFPIY YLMANLAAA DFFAGLAYF YLMFNTGPN 
TRRLTVSTW LLRQGLIDT SLTASVANL LAIAIERHI TVFRMQLHT 
RMSNRRVVV VIVVIWTMA IVMGAIPSV GWNCICDIE NCSNMAPLY 
SDSYLVFWA IFNLVTFVV MVVLYAHIF GYVRQRTMR MNRDTMMSL 
LKTVVIVLG AFIICWTPG LVLLLLDVC CPQCDVLAY EKFFLLLAE 
FNSAMNPII YSYRDKEMS ATF


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
9IZGALipidLysophospholipidLPA1Homo sapiensNKP-chim(NtGi1-Gs-CtGq)/β1/γ23.042025-01-0110.1016/j.jsb.2024.108164
9IZG (No Gprot) ALipidLysophospholipidLPA1Homo sapiensNKP-3.042025-01-0110.1016/j.jsb.2024.108164
9IZHALipidLysophospholipidLPA1Homo sapiensLPA-chim(NtGi2-G13)/β1/γ23.042025-01-01doi.org/10.1016/j.jsb.2024.108164
9IZH (No Gprot) ALipidLysophospholipidLPA1Homo sapiensLPA-3.042025-01-01doi.org/10.1016/j.jsb.2024.108164
9J5VALipidLysophospholipidLPA1Homo sapiensCpY-Gi1/β1/γ22.862024-11-2710.1038/s42003-024-07152-y
9J5V (No Gprot) ALipidLysophospholipidLPA1Homo sapiensCpY-2.862024-11-2710.1038/s42003-024-07152-y
9IZFALipidLysophospholipidLPA1Homo sapiensNKP-Gi1/β1/γ23.142025-01-0110.1016/j.jsb.2024.108164
9IZF (No Gprot) ALipidLysophospholipidLPA1Homo sapiensNKP-3.142025-01-0110.1016/j.jsb.2024.108164
7YU4ALipidLysophospholipidLPA1Homo sapiensONO-0740556--3.72022-10-0510.1038/s41467-022-33121-2
7YU8ALipidLysophospholipidLPA1Homo sapiensONO-0740556-Gi1/β1/γ25.62022-10-0510.1038/s41467-022-33121-2
7YU8 (No Gprot) ALipidLysophospholipidLPA1Homo sapiensONO-0740556-5.62022-10-0510.1038/s41467-022-33121-2
7YU7ALipidLysophospholipidLPA1Homo sapiensONO-0740556-Gi1/β1/γ24.52022-10-0510.1038/s41467-022-33121-2
7YU7 (No Gprot) ALipidLysophospholipidLPA1Homo sapiensONO-0740556-4.52022-10-0510.1038/s41467-022-33121-2
7YU6ALipidLysophospholipidLPA1Homo sapiensONO-0740556-Gi1/β1/γ23.92022-10-0510.1038/s41467-022-33121-2
7YU6 (No Gprot) ALipidLysophospholipidLPA1Homo sapiensONO-0740556-3.92022-10-0510.1038/s41467-022-33121-2
7YU5ALipidLysophospholipidLPA1Homo sapiensONO-0740556-Gi1/β1/γ23.72022-10-0510.1038/s41467-022-33121-2
7YU5 (No Gprot) ALipidLysophospholipidLPA1Homo sapiensONO-0740556-3.72022-10-0510.1038/s41467-022-33121-2
7YU3ALipidLysophospholipidLPA1Homo sapiensONO-0740556-Gi1/β1/γ23.52022-10-0510.1038/s41467-022-33121-2
7YU3 (No Gprot) ALipidLysophospholipidLPA1Homo sapiensONO-0740556-3.52022-10-0510.1038/s41467-022-33121-2
7TD2ALipidLysophospholipidLPA1Homo sapiensLPA-Gi1/β1/γ23.112022-02-0910.1038/s41467-022-28417-2
7TD2 (No Gprot) ALipidLysophospholipidLPA1Homo sapiensLPA-3.112022-02-0910.1038/s41467-022-28417-2
7TD1ALipidLysophospholipidLPA1Homo sapiensLPA-Gi1/β1/γ23.082022-02-0910.1038/s41467-022-28417-2
7TD1 (No Gprot) ALipidLysophospholipidLPA1Homo sapiensLPA-3.082022-02-0910.1038/s41467-022-28417-2
7TD0ALipidLysophospholipidLPA1Homo sapiensLPA-Gi1/β1/γ22.832022-02-0910.1038/s41467-022-28417-2
7TD0 (No Gprot) ALipidLysophospholipidLPA1Homo sapiensLPA-2.832022-02-0910.1038/s41467-022-28417-2
4Z36ALipidLysophospholipidLPA1Homo sapiensONO-3080573--2.92015-06-0310.1016/j.cell.2015.06.002
4Z35ALipidLysophospholipidLPA1Homo sapiensONO-9910539--2.92015-06-0310.1016/j.cell.2015.06.002
4Z34ALipidLysophospholipidLPA1Homo sapiensONO-9780307--32015-06-0310.1016/j.cell.2015.06.002




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Download 7TD2_nogp.zip



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