Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:?1 7.67710
2R:R:L105 5.21408
3R:R:F112 6.1525408
4R:R:L123 4.7075407
5R:R:V127 4.4825408
6R:R:M128 5.132508
7R:R:W141 9.25833627
8R:R:P142 5.435423
9R:R:L143 6.655425
10R:R:C148 6.335429
11R:R:Y153 4.77466
12R:R:F158 5.32407
13R:R:T160 3.9175417
14R:R:H165 6.556548
15R:R:Y174 4.976508
16R:R:W200 3.746549
17R:R:F243 7.32167618
18R:R:Y254 4.598509
19R:R:F329 4.5325408
20R:R:F332 6.024519
21R:R:W336 4.18667618
22R:R:F339 7.6925417
23R:R:F340 9.172517
24R:R:I358 3.6325404
25R:R:F365 3.084505
26R:R:Y370 7.8825407
27R:R:A374 2.055406
28R:R:V379 2.5475408
29R:R:Y380 4.3525459
30R:R:T381 5.565407
31R:R:Y387 10.1375408
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:?1 R:R:D155 95.22657.27YesNo008
2R:R:D155 R:R:Y370 18.74334.6NoYes087
3R:R:M128 R:R:Y370 15.488.38YesYes087
4R:R:M128 R:R:T88 14.28447.53YesNo087
5R:R:A374 R:R:T88 11.94713.36YesNo067
6R:R:D155 R:R:V127 78.26325.84NoYes088
7R:R:L123 R:R:V127 63.60124.47YesYes078
8R:R:F158 R:R:L123 63.38558.53YesYes077
9R:R:F158 R:R:L122 26.06086.09YesNo077
10R:R:L122 R:R:M121 20.99072.83NoNo077
11R:R:L123 R:R:S373 36.56963YesNo079
12R:R:D120 R:R:S373 35.29312.94NoNo099
13R:R:D120 R:R:N92 57.97376.73NoNo099
14R:R:A117 R:R:N92 54.53973.13NoNo099
15R:R:I93 R:R:M121 10.63472.92NoNo037
16R:R:A117 R:R:V95 42.10723.39NoNo099
17R:R:T381 R:R:V95 40.20143.17YesNo079
18R:R:A117 R:R:I96 12.87313.25NoNo096
19R:R:T381 R:R:Y387 32.919813.73YesYes078
20R:R:L105 R:R:Y387 14.77899.38YesYes088
21R:R:N384 R:R:Y387 10.54485.81NoYes098
22L:L:?1 R:R:T160 13.43044.74YesYes107
23R:R:M164 R:R:T160 11.1653.01NoYes067
24R:R:M164 R:R:V199 17.34093.04NoNo066
25R:R:H165 R:R:V199 17.50276.92YesNo086
26R:R:F112 R:R:H165 53.81165.66YesYes088
27R:R:F112 R:R:I169 47.59983.77YesNo089
28L:L:?1 R:R:F340 94.03099.13YesYes107
29R:R:F243 R:R:F340 51.042820.36YesYes187
30R:R:F243 R:R:F332 43.79725.36YesYes189
31R:R:F332 R:R:L166 46.80874.87YesNo098
32R:R:L166 R:R:Y380 49.31683.52NoYes089
33R:R:I169 R:R:Y380 46.40427.25NoYes599
34R:R:F340 R:R:W336 49.83823.01YesYes178
35R:R:F332 R:R:W336 44.03995.01YesYes198
36R:R:F112 R:R:K195 23.840312.41YesNo086
37R:R:F158 R:R:W200 35.06833.01YesYes079
38R:R:H165 R:R:W200 35.82344.23YesYes489
39R:R:H165 R:R:L116 26.64519YesNo089
40R:R:V127 R:R:W151 32.41646.13YesNo085
41R:R:V130 R:R:W151 28.35317.36NoNo045
42R:R:L143 R:R:V130 26.34842.98YesNo054
43R:R:L143 R:R:W141 18.509517.08YesYes257
44R:R:F158 R:R:L154 62.67533.65YesNo075
45R:R:L154 R:R:V150 17.46672.98NoNo054
46R:R:L147 R:R:V150 15.12052.98NoNo054
47R:R:L147 R:R:W141 13.85294.56NoYes057
48R:R:C148 R:R:W141 13.187710.45YesYes297
49R:R:L154 R:R:Y153 49.53253.52NoYes056
50R:R:P211 R:R:Y153 30.33086.95NoYes056
51R:R:I210 R:R:P211 27.84975.08NoNo065
52R:R:L157 R:R:Y153 13.11583.52NoYes666
53R:R:L157 R:R:V204 10.59872.98NoNo064
54R:R:S372 R:R:W336 11.01224.94NoYes098
55R:R:F332 R:R:M250 10012.44YesNo098
56R:R:F329 R:R:M250 97.32112.49YesNo088
57R:R:F329 R:R:Y254 89.12265.16YesYes089
58R:R:L325 R:R:Y254 75.50342.34NoYes089
59R:R:L325 R:R:T257 72.96842.95NoNo089
60R:R:T257 R:R:Y174 47.18636.24NoYes098
61R:R:T253 R:R:Y174 16.17222.5NoYes058
62R:R:Q178 R:R:Y174 16.17229.02NoYes068
63R:R:K191 R:R:K195 15.37224.31NoNo066
64R:R:F234 R:R:I210 22.80655.02NoNo076
65R:R:D231 R:R:F234 18.36573.58NoNo057
66R:R:D231 R:R:K220 13.20572.77NoNo053
67R:R:D217 R:R:K220 10.59872.77NoNo043
68R:R:F340 R:R:S239 41.12732.64YesNo076
69R:R:N343 R:R:S239 38.69114.47NoNo076
70R:R:N343 R:R:V235 36.2284.43NoNo076
71R:R:V235 R:R:V347 33.74693.21NoNo065
72R:R:I177 R:R:T257 25.08091.52NoNo099
73R:R:I177 R:R:L261 22.21321.43NoNo098
74R:R:E318 R:R:L261 15.86661.33NoNo088
75R:R:V379 R:R:Y380 16.83752.52YesYes089
76R:R:M335 R:R:S372 10.52684.6NoNo089
77R:R:F339 R:R:F365 11.94712.14YesYes075
78R:R:I348 R:R:V347 28.76661.54NoNo045
79R:R:C349 R:R:I348 26.24061.64NoNo034
80R:R:C349 R:R:C353 23.69651.82NoNo033
81R:R:C353 R:R:I358 21.13451.64NoYes034
82R:R:D120 R:R:L116 25.47649.5NoNo099
83R:R:L123 R:R:M128 15.15642.83YesYes078
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:?1 R:R:D155 7.27 1 Yes No 0 8 0 1
L:L:?1 R:R:S159 12.86 1 Yes No 0 7 0 1
L:L:?1 R:R:T160 4.74 1 Yes Yes 0 7 0 1
L:L:?1 R:R:S242 4.82 1 Yes No 0 6 0 1
L:L:?1 R:R:F339 13.04 1 Yes Yes 0 7 0 1
L:L:?1 R:R:F340 9.13 1 Yes Yes 0 7 0 1
R:R:D155 R:R:V127 5.84 0 No Yes 8 8 1 2
R:R:D155 R:R:Y370 4.6 0 No Yes 8 7 1 2
R:R:M164 R:R:T160 3.01 0 No Yes 6 7 2 1
R:R:S242 R:R:T160 6.4 1 No Yes 6 7 1 1
R:R:F243 R:R:W336 3.01 1 Yes Yes 8 8 2 2
R:R:F243 R:R:F340 20.36 1 Yes Yes 8 7 2 1
R:R:F340 R:R:W336 3.01 1 Yes Yes 7 8 1 2
R:R:F339 R:R:F340 10.72 1 Yes Yes 7 7 1 1
R:R:F339 R:R:L362 4.87 1 Yes No 7 3 1 2
R:R:F340 R:R:S239 2.64 1 Yes No 7 6 1 2
R:R:F339 R:R:F365 2.14 1 Yes Yes 7 5 1 2
R:R:G238 R:R:V241 1.84 0 No No 6 4 1 2
L:L:?1 R:R:G238 1.83 1 Yes No 0 6 0 1
R:R:I206 R:R:T160 1.52 0 No Yes 6 7 2 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 9LL7_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 2.83
Number of Linked Nodes 243
Number of Links 257
Number of Hubs 31
Number of Links mediated by Hubs 116
Number of Communities 7
Number of Nodes involved in Communities 31
Number of Links involved in Communities 37
Path Summary
Number Of Nodes in MetaPath 84
Number Of Links MetaPath 83
Number of Shortest Paths 31949
Length Of Smallest Path 3
Average Path Length 12.9474
Length of Longest Path 29
Minimum Path Strength 1.38
Average Path Strength 5.35164
Maximum Path Strength 17.03
Minimum Path Correlation 0.7
Average Path Correlation 0.919655
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 4.34783
Average % Of Corr. Nodes 46.9401
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 43.0471
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier• G protein-coupled receptor-like   • Ras-like P-loop GTPases   • Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• G protein-coupled receptor-like   • Ras-like P-loop GTPases   • Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
Code_L_
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
Code_L_
Name
Synonyms
Identifier
Formula
Molecular Weight
SMILES
PubChem
Formal Charge
Total Atoms
Total Chiral Atoms
Total Bonds
Total Aromatic Bonds

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP28223
Sequence
>9LL7_nogp_Chain_R
LTAVVIILT IAGNILVIM AVSLEKKLQ NATNYFLMS LAIADMLLG 
FLVMPVSML TILYGYRWP LPSKLCAVW IYLDVLFST ASIMHLCAI 
SLDRYVAIQ NPIHHSRFN SRTKAFLKI IAVWTISVG ISMPIPVFG 
LQDDSKVFK EGSCLLADD NFVLIGSFV SFFIPLTIM VITYFLTIK 
SLQISNEQK ACKVLGIVF FLFVVMWCP FFITNIMAV ICKESCNED 
VIGALLNVF VWIGYLSSA VNPLVYTLF NKTYRSAFS R


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
6A93AAmine5-Hydroxytryptamine5-HT2AHomo sapiensRisperidone--32019-02-13doi.org/10.1038/s41594-018-0180-z
6A94AAmine5-Hydroxytryptamine5-HT2AHomo sapiensZotepine--2.92019-02-13doi.org/10.1038/s41594-018-0180-z
6WGTAAmine5-Hydroxytryptamine5-HT2AHomo sapiensLSD--3.42020-09-23doi.org/10.1016/j.cell.2020.08.024
6WH4AAmine5-Hydroxytryptamine5-HT2AHomo sapiensMethiothepin--3.42020-09-23doi.org/10.1016/j.cell.2020.08.024
6WHAAAmine5-Hydroxytryptamine5-HT2AHomo sapiensDB13948-chim(NtGi2L-Gs-CtGq)/β1/γ23.362020-09-23doi.org/10.1016/j.cell.2020.08.024
6WHA (No Gprot) AAmine5-Hydroxytryptamine5-HT2AHomo sapiensDB13948-3.362020-09-23doi.org/10.1016/j.cell.2020.08.024
7VODAAmine5-Hydroxytryptamine5-HT2AHomo sapiensCariprazine--3.32021-12-22doi.org/10.1038/s41593-021-00971-w
7VOEAAmine5-Hydroxytryptamine5-HT2AHomo sapiensAripiprazole--2.92021-12-22doi.org/10.1038/s41593-021-00971-w
7WC4AAmine5-Hydroxytryptamine5-HT2AHomo sapiensSerotonin--3.22022-01-26doi.org/10.1126/science.abl8615
7WC5AAmine5-Hydroxytryptamine5-HT2AHomo sapiensPsilocin--3.22022-01-26doi.org/10.1126/science.abl8615
7WC6AAmine5-Hydroxytryptamine5-HT2AHomo sapiensLSD--2.62022-01-26doi.org/10.1126/science.abl8615
7WC7AAmine5-Hydroxytryptamine5-HT2AHomo sapiensLisuride--2.62022-01-26doi.org/10.1126/science.abl8615
7WC8AAmine5-Hydroxytryptamine5-HT2AHomo sapiensLumateperone--2.452022-01-26doi.org/10.1126/science.abl8615
7WC9AAmine5-Hydroxytryptamine5-HT2AHomo sapiensPubChem 162421364--2.52022-01-26doi.org/10.1126/science.abl8615
7RANAAmine5-Hydroxytryptamine5-HT2AHomo sapiensPubChem 164575847-chim(NtGi2L-Gs-CtGq)/β1/γ23.452022-07-06doi.org/10.1038/s41586-022-05258-z
7RAN (No Gprot) AAmine5-Hydroxytryptamine5-HT2AHomo sapiensPubChem 164575847-3.452022-07-06doi.org/10.1038/s41586-022-05258-z
8UWLAAmine5-Hydroxytryptamine5-HT2AHomo sapiensLisuride-chim(NtGi2-Gs-CtGq)/β1/γ22.82024-05-29doi.org/10.1126/science.adn6354
8UWL (No Gprot) AAmine5-Hydroxytryptamine5-HT2AHomo sapiensLisuride-2.82024-05-29doi.org/10.1126/science.adn6354
8V6UAAmine5-Hydroxytryptamine5-HT2AHomo sapiensPubChem 171392456-chim(NtGi2-Gs-CtGq)/β1/γ232024-05-29doi.org/10.1126/science.adn6354
8V6U (No Gprot) AAmine5-Hydroxytryptamine5-HT2AHomo sapiensPubChem 171392456-32024-05-29doi.org/10.1126/science.adn6354
8ZMGAAmine5-Hydroxytryptamine5-HT2AHomo sapiensPimavanserin--3.42024-08-28doi.org/10.1021/acs.jmedchem.4c01244
8JT8AAmine5-Hydroxytryptamine5-HT2AHomo sapiens(R)-IHCH-7179--2.72024-02-28doi.org/10.1016/j.cell.2024.02.034
9ARXAAmine5-Hydroxytryptamine5-HT2AHomo sapiensSerotonin--3.242025-04-02doi.org/10.1038/s41467-025-57956-7
9ARYAAmine5-Hydroxytryptamine5-HT2AHomo sapiensSerotonin-chim(NtGi1-Gs-CtGq)/β1/γ23.272025-04-02doi.org/10.1038/s41467-025-57956-7
9ARY (No Gprot) AAmine5-Hydroxytryptamine5-HT2AHomo sapiensSerotonin-3.272025-04-02doi.org/10.1038/s41467-025-57956-7
9ARZAAmine5-Hydroxytryptamine5-HT2AHomo sapiens2-bromo-LSD--3.372025-04-02doi.org/10.1038/s41467-025-57956-7
9AS0AAmine5-Hydroxytryptamine5-HT2AHomo sapiens2-bromo-LSD-chim(NtGi1-Gs-CtGq)/β1/γ23.382025-04-02doi.org/10.1038/s41467-025-57956-7
9AS0 (No Gprot) AAmine5-Hydroxytryptamine5-HT2AHomo sapiens2-bromo-LSD-3.382025-04-02doi.org/10.1038/s41467-025-57956-7
9AS1AAmine5-Hydroxytryptamine5-HT2AHomo sapiensDMT--3.382025-04-02doi.org/10.1038/s41467-025-57956-7
9AS2AAmine5-Hydroxytryptamine5-HT2AHomo sapiensDMT-chim(NtGi1-Gs-CtGq)/β1/γ23.212025-04-02doi.org/10.1038/s41467-025-57956-7
9AS2 (No Gprot) AAmine5-Hydroxytryptamine5-HT2AHomo sapiensDMT-3.212025-04-02doi.org/10.1038/s41467-025-57956-7
9AS3AAmine5-Hydroxytryptamine5-HT2AHomo sapiensLSD--3.182025-04-02doi.org/10.1038/s41467-025-57956-7
9AS4AAmine5-Hydroxytryptamine5-HT2AHomo sapiensLSD-chim(NtGi1-Gs-CtGq)/β1/γ23.062025-04-02doi.org/10.1038/s41467-025-57956-7
9AS4 (No Gprot) AAmine5-Hydroxytryptamine5-HT2AHomo sapiensLSD-3.062025-04-02doi.org/10.1038/s41467-025-57956-7
9AS5AAmine5-Hydroxytryptamine5-HT2AHomo sapiensMescaline--3.342025-04-02doi.org/10.1038/s41467-025-57956-7
9AS6AAmine5-Hydroxytryptamine5-HT2AHomo sapiensMescaline-chim(NtGi1-Gs-CtGq)/β1/γ23.072025-04-02doi.org/10.1038/s41467-025-57956-7
9AS6 (No Gprot) AAmine5-Hydroxytryptamine5-HT2AHomo sapiensMescaline-3.072025-04-02doi.org/10.1038/s41467-025-57956-7
9AS7AAmine5-Hydroxytryptamine5-HT2AHomo sapiensPsilocin--2.722025-04-02doi.org/10.1038/s41467-025-57956-7
9AS9AAmine5-Hydroxytryptamine5-HT2AHomo sapiensRS130-180--3.472025-04-02doi.org/10.1038/s41467-025-57956-7
9ASAAAmine5-Hydroxytryptamine5-HT2AHomo sapiensRS130-180-chim(NtGi1-Gs-CtGq)/β1/γ23.122025-04-02doi.org/10.1038/s41467-025-57956-7
9ASA (No Gprot) AAmine5-Hydroxytryptamine5-HT2AHomo sapiensRS130-180-3.122025-04-02doi.org/10.1038/s41467-025-57956-7
9AS8AAmine5-Hydroxytryptamine5-HT2AHomo sapiensPsilocin-chim(NtGi2L-Gs-CtGq)/β1/γ22.542025-04-0210.1038/s41467-025-57956-7
9AS8 (No Gprot) AAmine5-Hydroxytryptamine5-HT2AHomo sapiensPsilocin-2.542025-04-0210.1038/s41467-025-57956-7
9LL9AAmine5-Hydroxytryptamine5-HT2AHomo sapiensDOI-chim(NtGi1L-Gs-CtGq)/β1/γ22.762026-01-14To be published
9LL9 (No Gprot) AAmine5-Hydroxytryptamine5-HT2AHomo sapiensDOI-2.762026-01-14To be published
9LLAAAmine5-Hydroxytryptamine5-HT2AHomo sapiensAriadne-chim(NtGi1L-Gs-CtGq)/β1/γ23.272026-01-14To be published
9LLA (No Gprot) AAmine5-Hydroxytryptamine5-HT2AHomo sapiensAriadne-3.272026-01-14To be published
9LLBAAmine5-Hydroxytryptamine5-HT2AHomo sapiensDOI-NBOMe-chim(NtGi1L-Gs-CtGq)/β1/γ22.982026-01-14To be published
9LLB (No Gprot) AAmine5-Hydroxytryptamine5-HT2AHomo sapiensDOI-NBOMe-2.982026-01-14To be published
9LL7AAmine5-Hydroxytryptamine5-HT2AHomo sapiensDOI-Gi1/β1/γ22.842026-01-14To be published
9LL7 (No Gprot) AAmine5-Hydroxytryptamine5-HT2AHomo sapiensDOI-2.842026-01-14To be published
9LL8AAmine5-Hydroxytryptamine5-HT2AHomo sapiensPsilocin-Gi1/β1/γ22.622026-01-14To be published
9LL8 (No Gprot) AAmine5-Hydroxytryptamine5-HT2AHomo sapiensPsilocin-2.622026-01-14To be published




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