Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:L14 3.0325420
2L:L:R16 10.298510
3R:R:V23 4.825444
4R:R:M27 3.325446
5R:R:N41 5.5875409
6R:R:V44 4.1875479
7R:R:I59 3.708506
8R:R:W60 4.60833608
9R:R:H63 6.8425408
10R:R:D68 7.258509
11R:R:L79 2.905406
12R:R:L82 3.915447
13R:R:Q87 7.68496
14R:R:W88 4.8075429
15R:R:Y90 3.8425407
16R:R:I98 3.3625428
17R:R:P99 5.845428
18R:R:F111 2.73518
19R:R:R134 7.334509
20R:R:W147 4.3675409
21R:R:I163 4.095426
22R:R:F176 9.65833634
23R:R:R340 5.67419
24R:R:P348 3.124519
25R:R:Y356 5.692509
26R:R:F358 6.7854106
27R:R:V360 2.5525406
28R:R:V382 2.695408
29R:R:F386 4.5675419
30R:R:L387 2.3825406
31R:R:W390 6.32619
32R:R:T391 3.67406
33R:R:Y393 8.334519
34R:R:L413 4.3175407
35R:R:Y435 4.778589
36R:R:F442 5.59333679
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:L12 L:L:S10 11.71583NoNo000
2L:L:L12 L:L:R16 15.18197.29NoYes000
3L:L:R16 R:R:Y393 25.969620.58YesYes109
4R:R:R340 R:R:Y393 99.02615.14YesYes199
5R:R:I336 R:R:R340 95.53713.76NoYes079
6R:R:F176 R:R:I336 93.43452.51YesNo047
7R:R:F176 R:R:Y174 10014.44YesNo047
8R:R:R161 R:R:Y174 63.431718.52NoNo087
9R:R:C172 R:R:R161 28.04356.96NoNo088
10R:R:C172 R:R:C95 26.42227.28NoNo089
11R:R:C95 R:R:I163 16.63133.27NoYes296
12R:R:I163 R:R:N170 16.29337.08YesNo064
13R:R:N170 R:R:Q87 14.40853.96NoYes046
14R:R:H169 R:R:Q87 15.00439.89NoYes036
15R:R:H169 R:R:R171 12.02525.64NoNo031
16R:R:V157 R:R:Y174 35.74912.52NoNo097
17R:R:P99 R:R:V157 34.63763.53YesNo089
18L:L:L14 R:R:P99 29.33834.93YesYes208
19R:R:P99 R:R:R161 34.73511.53YesNo088
20R:R:I98 R:R:P99 38.23553.39YesYes288
21R:R:W390 R:R:Y393 90.51276.75YesYes199
22L:L:L14 R:R:S78 41.11.5YesNo008
23R:R:L30 R:R:S78 40.36091.5NoNo068
24R:R:L30 R:R:L79 29.53314.15NoYes066
25R:R:L79 R:R:M27 44.60042.83YesYes066
26R:R:M27 R:R:V23 34.17933.04YesYes464
27R:R:E20 R:R:V23 31.82478.56NoYes044
28R:R:E20 R:R:P21 29.23521.57NoNo046
29R:R:P21 R:R:P22 24.02185.84NoNo064
30R:R:P22 R:R:W416 18.722422.97NoNo647
31R:R:V419 R:R:W416 16.11572.45NoNo057
32R:R:I29 R:R:V419 13.45751.54NoNo075
33R:R:L30 R:R:L75 12.48939.69NoNo069
34R:R:N427 R:R:W390 62.09685.65NoYes099
35R:R:N427 R:R:N431 59.06046.81NoNo099
36R:R:D68 R:R:N431 61.37510.77YesNo099
37R:R:D68 R:R:N41 85.8156.73YesYes099
38R:R:L69 R:R:N41 58.08652.75NoYes079
39R:R:L69 R:R:L73 56.91216.92NoNo078
40R:R:L38 R:R:L73 55.75482.77NoNo078
41R:R:F34 R:R:L38 54.964214.61NoNo077
42R:R:F34 R:R:P76 54.30544.33NoNo079
43R:R:C389 R:R:N427 17.73137.87NoNo099
44R:R:C389 R:R:F430 15.80642.79NoNo097
45R:R:N41 R:R:P432 55.95538.15YesNo099
46R:R:P432 R:R:V44 47.0181.77NoYes099
47R:R:F442 R:R:V44 37.79435.24YesYes799
48R:R:F442 R:R:V47 14.694910.49YesNo098
49R:R:A48 R:R:F442 12.05962.77NoYes079
50R:R:V110 R:R:W390 37.31314.9NoYes199
51R:R:P348 R:R:V110 46.86913.53YesNo199
52R:R:F111 R:R:P348 29.56752.89YesYes189
53R:R:F111 R:R:I146 36.5112.51YesNo088
54R:R:I146 R:R:L112 35.1594.28NoNo089
55R:R:H63 R:R:L112 34.59182.57YesNo089
56R:R:H63 R:R:I59 22.37182.65YesYes086
57R:R:I59 R:R:T58 12.54083.04YesNo068
58R:R:L113 R:R:N431 58.7114.12NoNo089
59R:R:L113 R:R:Y435 87.95197.03NoYes089
60R:R:I116 R:R:Y435 61.88484.84NoYes899
61R:R:I116 R:R:W60 73.08513.52NoYes098
62R:R:V56 R:R:W60 23.29993.68NoYes088
63R:R:R134 R:R:V56 21.3759.15YesNo098
64R:R:D119 R:R:W60 23.29427.82NoYes098
65R:R:D119 R:R:R134 21.489511.91NoYes099
66R:R:C143 R:R:H63 30.375314.74NoYes088
67R:R:C143 R:R:W60 31.03415.22NoYes088
68R:R:H63 R:R:W147 32.01957.41YesYes089
69R:R:D68 R:R:L64 31.92784.07YesNo099
70R:R:L113 R:R:L64 31.99664.15NoNo089
71R:R:L66 R:R:W147 22.37182.28NoYes049
72R:R:L66 R:R:L70 19.93132.77NoNo046
73R:R:L70 R:R:N105 17.47926.87NoNo069
74R:R:F77 R:R:I98 25.40822.51NoYes088
75R:R:F77 R:R:Y90 19.59324.13NoYes087
76R:R:I98 R:R:W88 28.34144.7YesYes289
77R:R:W88 R:R:Y90 26.74885.79YesYes097
78R:R:P89 R:R:Y90 30.48982.78NoYes087
79R:R:L84 R:R:P89 16.09283.28NoNo988
80R:R:I101 R:R:N105 15.01581.42NoNo059
81R:R:I101 R:R:L97 12.54082.85NoNo056
82R:R:F158 R:R:L97 10.05444.87NoNo086
83R:R:F386 R:R:W390 37.37617.02YesYes199
84R:R:F111 R:R:V343 17.70842.62YesNo084
85R:R:P348 R:R:T114 18.03493.5YesNo098
86R:R:I351 R:R:T114 16.45374.56NoNo068
87R:R:F386 R:R:M352 41.18594.98YesNo098
88R:R:M352 R:R:S117 20.34954.6NoNo089
89R:R:S117 R:R:Y356 20.84796.36NoYes099
90R:R:R120 R:R:Y356 22.25729.26NoYes099
91R:R:M352 R:R:V383 20.34953.04NoNo088
92R:R:V383 R:R:Y356 20.81355.05NoYes089
93R:R:I351 R:R:L118 14.91264.28NoNo068
94R:R:C355 R:R:L118 13.40593.17NoNo098
95R:R:C121 R:R:C355 11.96225.46NoNo099
96R:R:C130 R:R:R134 35.76054.18NoYes079
97R:R:C130 R:R:L122 15.79494.76NoNo077
98R:R:C130 R:R:W129 16.67722.61NoNo076
99R:R:H133 R:R:W129 12.523619.04NoNo086
100R:R:F176 R:R:L333 22.17715.83YesNo343
101R:R:L333 R:R:L401 21.24322.77NoNo037
102R:R:L401 R:R:V334 16.61422.98NoNo074
103R:R:H394 R:R:Y393 21.15156.53NoYes099
104R:R:F345 R:R:H394 16.029819.23NoNo099
105R:R:F345 R:R:T391 15.35955.19NoYes096
106R:R:A379 R:R:Y356 29.81384NoYes079
107R:R:V382 R:R:Y356 20.37243.79YesYes089
108R:R:V382 R:R:Y435 20.85363.79YesYes089
109R:R:A379 R:R:V360 26.08991.7NoYes076
110R:R:T375 R:R:V360 11.10281.59NoYes076
111R:R:V378 R:R:V382 17.12981.6NoYes088
112R:R:K374 R:R:V378 10.59873.04NoNo098
113R:R:F386 R:R:L387 31.72163.65YesYes096
114R:R:P392 R:R:T391 32.47213.5NoYes096
115R:R:C420 R:R:P392 28.2671.88NoNo069
116R:R:C420 R:R:F396 26.14728.38NoNo064
117R:R:F396 R:R:L413 24.0167.31NoYes047
118R:R:L409 R:R:L413 17.73132.77NoYes037
119R:R:L409 R:R:T407 13.36581.47NoNo037
120R:R:V342 R:R:V343 17.15841.6NoNo064
121R:R:I338 R:R:V334 16.3851.54NoNo064
122R:R:I338 R:R:V342 16.68861.54NoNo066
123L:L:L14 R:R:I98 18.43032.85YesYes208
124R:R:L75 R:R:P76 13.6581.64NoNo099
125R:R:L79 R:R:P76 40.63591.64YesNo069
126R:R:L387 R:R:T391 23.08792.95YesYes066
127R:R:K126 R:R:L122 11.85912.82NoNo067
128R:R:F386 R:R:V110 10.89662.62YesNo199
129R:R:I116 R:R:R120 12.52943.76NoNo899
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:A9 R:R:F164 8.32 0 No No 0 3 0 1
L:L:S10 R:R:G173 3.71 0 No No 0 1 0 1
L:L:K11 R:R:G86 5.23 5 No No 0 7 0 1
L:L:K11 R:R:R171 6.19 5 No No 0 1 0 1
L:L:L14 R:R:I98 2.85 2 Yes Yes 0 8 0 1
L:L:L14 R:R:P99 4.93 2 Yes Yes 0 8 0 1
L:L:L14 R:R:I102 2.85 2 Yes No 0 8 0 1
L:L:A15 R:R:M106 3.22 0 No No 0 9 0 1
L:L:R16 R:R:Y393 20.58 1 Yes Yes 0 9 0 1
L:L:R16 R:R:G397 3 1 Yes No 0 8 0 1
L:L:R16 R:R:D417 13.1 1 Yes No 0 8 0 1
L:L:R16 R:R:I421 7.52 1 Yes No 0 4 0 1
R:R:F77 R:R:S74 2.64 0 No No 8 9 2 2
R:R:I102 R:R:S74 4.64 0 No No 8 9 1 2
R:R:F77 R:R:I98 2.51 0 No Yes 8 8 2 1
R:R:G86 R:R:H81 3.18 5 No No 7 7 1 2
R:R:G86 R:R:R171 3 5 No No 7 1 1 1
R:R:I98 R:R:W88 4.7 2 Yes Yes 8 9 1 2
R:R:I98 R:R:P99 3.39 2 Yes Yes 8 8 1 1
R:R:P99 R:R:V157 3.53 2 Yes No 8 9 1 2
R:R:P99 R:R:R161 11.53 2 Yes No 8 8 1 2
R:R:M106 R:R:W390 5.82 0 No Yes 9 9 1 2
R:R:E162 R:R:F164 11.66 0 No No 5 3 2 1
R:R:F164 R:R:G173 3.01 0 No No 3 1 1 1
R:R:H169 R:R:R171 5.64 0 No No 3 1 2 1
R:R:R340 R:R:Y393 5.14 1 Yes Yes 9 9 2 1
R:R:W390 R:R:Y393 6.75 1 Yes Yes 9 9 2 1
R:R:A424 R:R:W390 7.78 1 No Yes 9 9 2 2
R:R:H394 R:R:Y393 6.53 0 No Yes 9 9 2 1
R:R:A424 R:R:Y393 2.67 1 No Yes 9 9 2 1
R:R:D417 R:R:I421 2.8 1 No No 8 4 1 1
L:L:L14 R:R:S78 1.5 2 Yes No 0 8 0 1
R:R:L30 R:R:S78 1.5 0 No No 6 8 2 1
R:R:D417 R:R:S400 1.47 1 No No 8 2 1 2

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 8IA8_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 2.51
Number of Linked Nodes 268
Number of Links 297
Number of Hubs 36
Number of Links mediated by Hubs 138
Number of Communities 11
Number of Nodes involved in Communities 50
Number of Links involved in Communities 58
Path Summary
Number Of Nodes in MetaPath 130
Number Of Links MetaPath 129
Number of Shortest Paths 58621
Length Of Smallest Path 3
Average Path Length 14.592
Length of Longest Path 36
Minimum Path Strength 1.395
Average Path Strength 5.49544
Maximum Path Strength 16.84
Minimum Path Correlation 0.7
Average Path Correlation 0.927858
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 4.54545
Average % Of Corr. Nodes 48.8506
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 39.7715
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier• Ras-like P-loop GTPases   • Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• Ras-like P-loop GTPases   • Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtQ16581
Sequence
>8IA8_nogp_Chain_R
WNEPPVILS MVILSLTFL LGLPGNGLV LWVAGLKMQ RTVNTIWFL 
HLTLADLLC CLSLPFSLA HLALQGQWP YGRFLCKLI PSIIVLNMF 
ASVFLLTAI SLDRCLVVF KPIWCQNHR NVGMACSIC GCIWVVAFV 
MCIPVFVYR EIFTTDNHN RCGYKFGVP TPLVAITIT RLVVGFLLP 
SVIMIACYS FIVFRMQRG RFAKSQSKT FRVAVVVVA VFLVCWTPY 
HIFGVLSLL TDPETPLGK TLMSWDHVC IALASANSC FNPFLYALL 
GKDFRKKAR QSIQGIL


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
8J6DAPeptideComplement PeptideC3aBHomo sapiensEP141-Go/β1/γ23.12023-10-1810.1016/j.cell.2023.09.020
8J6D (No Gprot) APeptideComplement PeptideC3aBHomo sapiensEP141-3.12023-10-1810.1016/j.cell.2023.09.020
8I9AAPeptideComplement PeptideC3aBHomo sapiensEP54-chim(NtGi1-Gs-CtGq)/β1/γ23.572023-10-1810.1016/j.cell.2023.09.020
8I9A (No Gprot) APeptideComplement PeptideC3aBHomo sapiensEP54-3.572023-10-1810.1016/j.cell.2023.09.020
8I9SAPeptideComplement PeptideC3aBHomo sapiens--Go/β1/γ23.262023-10-1810.1016/j.cell.2023.09.020
8I9S (No Gprot) APeptideComplement PeptideC3aBHomo sapiens--3.262023-10-1810.1016/j.cell.2023.09.020
8I9LAPeptideComplement PeptideC3aBHomo sapiensC3a anaphylatoxin-Go/β1/γ23.182023-10-1810.1016/j.cell.2023.09.020
8I9L (No Gprot) APeptideComplement PeptideC3aBHomo sapiensC3a anaphylatoxin-3.182023-10-1810.1016/j.cell.2023.09.020
8I97APeptideComplement PeptideC3aBHomo sapiens--Go/β1/γ23.12023-10-1810.1016/j.cell.2023.09.020
8I97 (No Gprot) APeptideComplement PeptideC3aBHomo sapiens--3.12023-10-1810.1016/j.cell.2023.09.020
8I95APeptideComplement PeptideC3aBHomo sapiensEP54-Go/β1/γ22.882023-10-1810.1016/j.cell.2023.09.020
8I95 (No Gprot) APeptideComplement PeptideC3aBHomo sapiensEP54-2.882023-10-1810.1016/j.cell.2023.09.020
8IA8APeptideComplement PeptideC3aBHomo sapiensE7 peptide-Gi1/β1/γ22.862023-05-24To be published
8IA8 (No Gprot) APeptideComplement PeptideC3aBHomo sapiensE7 peptide-2.862023-05-24To be published
8HK3APeptideComplement PeptideC3aBHomo sapiens--Gi1/β1/γ23.22023-05-1010.1038/s41589-023-01339-w
8HK3 (No Gprot) APeptideComplement PeptideC3aBHomo sapiens--3.22023-05-1010.1038/s41589-023-01339-w
8HK2APeptideComplement PeptideC3aBHomo sapiensC3a anaphylatoxin-Gi1/β1/γ22.92023-05-1010.1038/s41589-023-01339-w
8HK2 (No Gprot) APeptideComplement PeptideC3aBHomo sapiensC3a anaphylatoxin-2.92023-05-1010.1038/s41589-023-01339-w




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 8IA8_nogp.zip



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