Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:P22 7.5125454
2R:R:F34 3.5175407
3R:R:N41 7.29419
4R:R:V44 5.9675429
5R:R:W46 5.418526
6R:R:V47 3.704528
7R:R:W60 5.00333608
8R:R:L64 4.616519
9R:R:D68 7.7575419
10R:R:I98 4.065418
11R:R:I116 4.2825419
12R:R:V124 5.24449
13R:R:R134 8.2725439
14R:R:W147 4.975409
15R:R:M153 3.0025408
16R:R:V157 4.726519
17R:R:Y160 8.6825478
18R:R:R161 5.6125418
19R:R:R340 4.74419
20R:R:L341 3.2625416
21R:R:Y356 4.95833619
22R:R:F358 8.5075446
23R:R:R362 9.645447
24R:R:W390 7719
25R:R:Y393 9.57419
26R:R:H394 10.16419
27R:R:L413 4.305407
28R:R:W416 6.725457
29R:R:N431 8.022519
30R:R:Y435 5.19667619
31R:R:F442 6.332529
32L:L:?1 8.071610
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:V419 R:R:W416 11.76596.13NoYes057
2R:R:S26 R:R:V419 15.01033.23NoNo085
3R:R:A422 R:R:S26 18.01633.42NoNo088
4R:R:A422 R:R:L30 25.76313.15NoNo086
5L:L:?1 R:R:L30 30.05366.05YesNo006
6R:R:C429 R:R:L36 33.00673.17NoNo098
7R:R:F433 R:R:L36 34.69514.87NoNo068
8R:R:F433 R:R:L437 36.39013.65NoNo067
9R:R:L437 R:R:V44 38.07192.98NoYes079
10R:R:T65 R:R:V44 71.80037.93NoYes099
11R:R:N41 R:R:T65 74.27665.85YesNo099
12R:R:D68 R:R:N41 76.42199.42YesYes199
13R:R:D68 R:R:N431 81.67258.08YesYes199
14R:R:N427 R:R:N431 81.334810.9NoYes099
15R:R:N427 R:R:W390 81.74546.78NoYes099
16R:R:W390 R:R:Y393 85.84395.79YesYes199
17L:L:?1 R:R:Y393 10019.78YesYes109
18R:R:C429 R:R:T33 24.26675.07NoNo098
19R:R:L75 R:R:T33 20.6782.95NoNo098
20R:R:F34 R:R:L75 17.03643.65YesNo079
21R:R:F34 R:R:L38 11.47454.87YesNo077
22R:R:F442 R:R:V44 40.17747.87YesYes299
23R:R:F442 R:R:V47 28.08715.24YesYes298
24R:R:L43 R:R:V47 16.78472.98NoYes088
25R:R:I450 R:R:L43 14.95074.28NoNo048
26R:R:F442 R:R:M52 11.47457.46YesNo099
27R:R:N431 R:R:Y435 56.1614.65YesYes199
28R:R:I116 R:R:Y435 28.51754.84YesYes199
29R:R:I116 R:R:W60 34.6093.52YesYes098
30R:R:A139 R:R:W60 15.30823.89NoYes078
31R:R:A139 R:R:I59 14.01054.87NoNo076
32R:R:I59 R:R:R54 10.93162.51NoNo067
33R:R:D119 R:R:W60 14.96398.93NoYes098
34R:R:L112 R:R:L64 12.97094.15NoYes099
35R:R:L64 R:R:N431 11.81226.87YesYes199
36L:L:?1 R:R:V157 20.22114.65YesYes109
37R:R:S100 R:R:V157 20.44636.46NoYes089
38R:R:C154 R:R:S100 12.95773.44NoNo088
39R:R:C154 R:R:L104 11.3627.94NoNo088
40L:L:?1 R:R:I98 11.23623.57YesYes108
41L:L:?1 R:R:R161 20.28073.8YesYes108
42R:R:C172 R:R:R161 13.38814.18NoYes088
43L:L:?1 R:R:R340 30.82173.8YesYes109
44R:R:I336 R:R:R340 12.75913.76NoYes079
45R:R:F107 R:R:R340 19.60547.48NoYes089
46R:R:F107 R:R:M153 16.44043.73NoYes088
47R:R:F386 R:R:W390 30.37819.02NoYes199
48R:R:F386 R:R:M352 32.12617.46NoNo198
49R:R:M352 R:R:Y356 16.40733.59NoYes189
50R:R:R120 R:R:Y356 25.59768.23NoYes199
51R:R:R120 R:R:Y435 16.2556.17NoYes199
52R:R:M352 R:R:S117 15.85786.13NoNo189
53R:R:C355 R:R:S117 36.85363.44NoNo099
54R:R:C121 R:R:C355 34.9077.28NoNo099
55R:R:C121 R:R:F358 32.93394.19NoYes096
56R:R:F125 R:R:F358 16.77158.57NoYes466
57R:R:F125 R:R:K126 15.05669.93NoNo066
58R:R:K126 R:R:W129 10.8192.32NoNo066
59R:R:H394 R:R:Y393 14.36148.71YesYes199
60R:R:F345 R:R:H394 29.888121.5NoYes199
61R:R:F345 R:R:T391 28.90156.49NoNo096
62R:R:A379 R:R:Y356 19.13534NoYes079
63R:R:V382 R:R:Y356 16.23523.79NoYes089
64R:R:V382 R:R:Y435 16.46033.79NoYes089
65R:R:V383 R:R:Y356 10.8195.05NoYes089
66R:R:A379 R:R:V360 17.0431.7NoNo076
67R:R:T375 R:R:V360 10.68663.17NoNo076
68R:R:P392 R:R:T391 25.88235.25NoNo096
69R:R:C420 R:R:P392 22.813.77NoNo069
70R:R:C420 R:R:F396 21.24749.78NoNo064
71R:R:F396 R:R:L413 19.6659.74NoYes047
72R:R:L409 R:R:T407 10.16351.47NoNo037
73R:R:L409 R:R:T403 11.81222.95NoNo032
74R:R:G410 R:R:T403 13.44771.82NoNo032
75R:R:G410 R:R:L413 15.06991.71NoYes037
76R:R:S117 R:R:Y356 22.92265.09NoYes199
77R:R:H394 R:R:W390 23.27355.29YesYes199
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
R:R:L30 R:R:L79 4.15 0 No No 6 6 1 2
L:L:?1 R:R:L30 6.05 1 Yes No 0 6 0 1
R:R:I102 R:R:S74 4.64 0 No No 8 9 1 2
R:R:F77 R:R:I98 5.02 0 No Yes 8 8 2 1
L:L:?1 R:R:S78 9.38 1 Yes No 0 8 0 1
L:L:?1 R:R:H81 20.89 1 Yes No 0 7 0 1
R:R:I98 R:R:L94 4.28 1 Yes No 8 8 1 2
R:R:I98 R:R:P99 3.39 1 Yes No 8 8 1 1
L:L:?1 R:R:I98 3.57 1 Yes Yes 0 8 0 1
R:R:P99 R:R:R161 12.97 1 No Yes 8 8 1 1
L:L:?1 R:R:P99 7.18 1 Yes No 0 8 0 1
R:R:S100 R:R:V157 6.46 0 No Yes 8 9 2 1
L:L:?1 R:R:I102 3.57 1 Yes No 0 8 0 1
R:R:V103 R:R:V157 4.81 1 No Yes 5 9 1 1
L:L:?1 R:R:V103 3.72 1 Yes No 0 5 0 1
R:R:F107 R:R:R340 7.48 0 No Yes 8 9 2 1
R:R:V157 R:R:Y174 3.79 1 Yes No 9 7 1 1
R:R:R340 R:R:V157 3.92 1 Yes Yes 9 9 1 1
L:L:?1 R:R:V157 4.65 1 Yes Yes 0 9 0 1
R:R:C172 R:R:R161 4.18 0 No Yes 8 8 2 1
L:L:?1 R:R:R161 3.8 1 Yes Yes 0 8 0 1
L:L:?1 R:R:Y174 10.26 1 Yes No 0 7 0 1
R:R:I336 R:R:R340 3.76 0 No Yes 7 9 2 1
L:L:?1 R:R:R340 3.8 1 Yes Yes 0 9 0 1
R:R:W390 R:R:Y393 5.79 1 Yes Yes 9 9 2 1
R:R:H394 R:R:W390 5.29 1 Yes Yes 9 9 2 2
R:R:A424 R:R:W390 7.78 1 No Yes 9 9 2 2
R:R:H394 R:R:Y393 8.71 1 Yes Yes 9 9 2 1
R:R:A424 R:R:Y393 4 1 No Yes 9 9 2 1
L:L:?1 R:R:Y393 19.78 1 Yes Yes 0 9 0 1
L:L:?1 R:R:G397 3.21 1 Yes No 0 8 0 1
L:L:?1 R:R:D417 8.48 1 Yes No 0 8 0 1
L:L:?1 R:R:H418 5.62 1 Yes No 0 4 0 1
L:L:?1 R:R:I421 15.16 1 Yes No 0 4 0 1
R:R:G86 R:R:H81 3.18 0 No No 7 7 2 1
R:R:A422 R:R:L30 3.15 0 No No 8 6 2 1
R:R:G397 R:R:T337 1.82 0 No No 8 7 1 2
R:R:G173 R:R:R161 1.5 0 No Yes 1 8 2 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 9IPV_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3.21
Number of Linked Nodes 258
Number of Links 287
Number of Hubs 32
Number of Links mediated by Hubs 131
Number of Communities 7
Number of Nodes involved in Communities 53
Number of Links involved in Communities 72
Path Summary
Number Of Nodes in MetaPath 78
Number Of Links MetaPath 77
Number of Shortest Paths 35640
Length Of Smallest Path 3
Average Path Length 12.8063
Length of Longest Path 32
Minimum Path Strength 1.36
Average Path Strength 6.30381
Maximum Path Strength 17.72
Minimum Path Correlation 0.7
Average Path Correlation 0.924799
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 4.54545
Average % Of Corr. Nodes 50.3769
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 42.0077
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain   • Ras-like P-loop GTPases
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain   • Ras-like P-loop GTPases
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeA1D
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodeA1D
Name
Synonyms
Identifier
Formula
Molecular Weight
SMILES
PubChem
Formal Charge
Total Atoms
Total Chiral Atoms
Total Bonds
Total Aromatic Bonds

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtQ16581
Sequence
>9IPV_nogp_Chain_R
EPPVILSMV ILSLTFLLG LPGNGLVLW VAGLKMQRT VNTIWFLHL 
TLADLLCCL SLPFSLAHL ALQGQWPYG RFLCKLIPS IIVLNMFAS 
VFLLTAISL DRCLVVFKP IWCQNHRNV GMACSICGC IWVVAFVMC 
IPVFVYREI FTHNRCGYT PLVAITITR LVVGFLLPS VIMIACYSF 
IVFRMQRGR FAKSQSKTF RVAVVVVAV FLVCWTPYH IFGVLSLLT 
DPETPLGKT LMSWDHVCI ALASANSCF NPFLYALLG KDFRKKARQ 
SIQGILE


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
8I95APeptideComplement PeptideC3aBHomo sapiensEP54-Go/β1/γ22.882023-10-18doi.org/10.1016/j.cell.2023.09.020
8I95 (No Gprot) APeptideComplement PeptideC3aBHomo sapiensEP54-2.882023-10-18doi.org/10.1016/j.cell.2023.09.020
8I97APeptideComplement PeptideC3aBHomo sapiens--Go/β1/γ23.12023-10-18doi.org/10.1016/j.cell.2023.09.020
8I97 (No Gprot) APeptideComplement PeptideC3aBHomo sapiens--3.12023-10-18doi.org/10.1016/j.cell.2023.09.020
8I9AAPeptideComplement PeptideC3aBHomo sapiensEP54-chim(NtGi1-Gs-CtGq)/β1/γ23.572023-10-18doi.org/10.1016/j.cell.2023.09.020
8I9A (No Gprot) APeptideComplement PeptideC3aBHomo sapiensEP54-3.572023-10-18doi.org/10.1016/j.cell.2023.09.020
8I9LAPeptideComplement PeptideC3aBHomo sapiensC3a anaphylatoxin-Go/β1/γ23.182023-10-18doi.org/10.1016/j.cell.2023.09.020
8I9L (No Gprot) APeptideComplement PeptideC3aBHomo sapiensC3a anaphylatoxin-3.182023-10-18doi.org/10.1016/j.cell.2023.09.020
8I9SAPeptideComplement PeptideC3aBHomo sapiens--Go/β1/γ23.262023-10-18doi.org/10.1016/j.cell.2023.09.020
8I9S (No Gprot) APeptideComplement PeptideC3aBHomo sapiens--3.262023-10-18doi.org/10.1016/j.cell.2023.09.020
8J6DAPeptideComplement PeptideC3aBHomo sapiensEP141-Go/β1/γ23.12023-10-18doi.org/10.1016/j.cell.2023.09.020
8J6D (No Gprot) APeptideComplement PeptideC3aBHomo sapiensEP141-3.12023-10-18doi.org/10.1016/j.cell.2023.09.020
8HK2APeptideComplement PeptideC3aBHomo sapiensC3a anaphylatoxin-Gi1/β1/γ22.92023-05-10doi.org/10.1038/s41589-023-01339-w
8HK2 (No Gprot) APeptideComplement PeptideC3aBHomo sapiensC3a anaphylatoxin-2.92023-05-10doi.org/10.1038/s41589-023-01339-w
8HK3APeptideComplement PeptideC3aBHomo sapiens--Gi1/β1/γ23.22023-05-10doi.org/10.1038/s41589-023-01339-w
8HK3 (No Gprot) APeptideComplement PeptideC3aBHomo sapiens--3.22023-05-10doi.org/10.1038/s41589-023-01339-w
8ZWFAPeptideComplement PeptideC3aBHomo sapiensJR14a--32025-05-14doi.org/10.1038/s41421-024-00765-x
8ZWGAPeptideComplement PeptideC3aBHomo sapiensJR14a-Gi1/β1/γ22.872025-05-14doi.org/10.1038/s41421-024-00765-x
8ZWG (No Gprot) APeptideComplement PeptideC3aBHomo sapiensJR14a-2.872025-05-14doi.org/10.1038/s41421-024-00765-x
9IPVAPeptideComplement PeptideC3aBHomo sapiensJR14a-Gi1/β1/γ22.532025-04-23doi.org/10.1038/s44318-025-00429-w
9IPV (No Gprot) APeptideComplement PeptideC3aBHomo sapiensJR14a-2.532025-04-23doi.org/10.1038/s44318-025-00429-w
9IPYAPeptideComplement PeptideC3aBHomo sapiensJR14a--3.552025-04-23doi.org/10.1038/s44318-025-00429-w
9ISIAPeptideComplement PeptideC3aBHomo sapiens---3.562025-04-23doi.org/10.1038/s44318-025-00429-w
8IA8APeptideComplement PeptideC3aBHomo sapiensE7 peptide-Gi1/β1/γ22.862023-05-24To be published
8IA8 (No Gprot) APeptideComplement PeptideC3aBHomo sapiensE7 peptide-2.862023-05-24To be published




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 9IPV_nogp.zip



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