Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:P22 7.5125454
2R:R:F34 3.5175407
3R:R:N41 7.29409
4R:R:V44 5.9675469
5R:R:W46 5.418526
6R:R:V47 3.8225408
7R:R:W60 5.00333608
8R:R:L64 4.616519
9R:R:I98 4.155418
10R:R:I116 4.2825419
11R:R:V124 5.24449
12R:R:R134 8.2725439
13R:R:W147 4.975409
14R:R:M153 3.0025408
15R:R:V157 4.82519
16R:R:Y160 8.6825488
17R:R:R161 5.7075418
18R:R:R340 4.835419
19R:R:L341 3.2625416
20R:R:Y356 4.95833619
21R:R:F358 8.5075446
22R:R:R362 9.645447
23R:R:W390 7719
24R:R:Y393 10.065419
25R:R:H394 10.16419
26R:R:L413 4.305407
27R:R:W416 6.725457
28R:R:N431 8.022519
29R:R:Y435 5.19667619
30R:R:F442 6.332569
31L:L:?1 8.879381610
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:V419 R:R:W416 11.7896.13NoYes057
2R:R:A422 R:R:S26 18.04983.42NoNo088
3R:R:S26 R:R:V419 15.03933.23NoNo085
4R:R:A422 R:R:L30 25.80923.15NoNo086
5L:L:?1 R:R:L30 30.10526.66YesNo006
6R:R:C429 R:R:L36 33.08253.17NoNo098
7R:R:F433 R:R:L36 34.77424.87NoNo068
8R:R:F433 R:R:L437 36.47263.65NoNo067
9R:R:L437 R:R:V44 38.15772.98NoYes079
10R:R:T65 R:R:V44 71.23357.93NoYes099
11R:R:N41 R:R:T65 73.73785.85YesNo099
12R:R:D68 R:R:N41 77.51439.42NoYes099
13R:R:D68 R:R:N431 81.21098.08NoYes099
14R:R:N427 R:R:N431 80.977810.9NoYes099
15R:R:N427 R:R:W390 81.4046.78NoYes099
16R:R:W390 R:R:Y393 85.75335.79YesYes199
17L:L:?1 R:R:Y393 10021.76YesYes109
18R:R:C429 R:R:T33 24.3245.07NoNo098
19R:R:L75 R:R:T33 20.72732.95NoNo098
20R:R:F34 R:R:L75 17.07743.65YesNo079
21R:R:F34 R:R:L38 11.50264.87YesNo077
22R:R:F442 R:R:V44 39.27677.87YesYes699
23R:R:F442 R:R:V47 27.05475.24YesYes098
24R:R:L43 R:R:V47 16.82432.98NoYes088
25R:R:I450 R:R:L43 14.9864.28NoNo048
26R:R:V47 R:R:W46 10.76993.68YesYes086
27R:R:F442 R:R:M52 11.50267.46YesNo099
28R:R:N431 R:R:Y435 56.46064.65YesYes199
29R:R:I116 R:R:Y435 28.66664.84YesYes199
30R:R:I116 R:R:W60 35.23383.52YesYes098
31R:R:A139 R:R:W60 15.81863.89NoYes078
32R:R:A139 R:R:I59 14.51314.87NoNo076
33R:R:I59 R:R:R54 11.4162.51NoNo067
34R:R:D119 R:R:W60 15.05268.93NoYes098
35R:R:L112 R:R:L64 13.00124.15NoYes099
36R:R:L64 R:R:N431 11.82236.87YesYes199
37L:L:?1 R:R:V157 20.24785.12YesYes109
38R:R:S100 R:R:V157 20.48096.46NoYes089
39R:R:C154 R:R:S100 12.98123.44NoNo088
40R:R:C154 R:R:L104 11.38277.94NoNo088
41L:L:?1 R:R:I98 11.25623.93YesYes108
42L:L:?1 R:R:R161 20.31444.18YesYes108
43R:R:C172 R:R:R161 13.41414.18NoYes088
44L:L:?1 R:R:R340 30.86454.18YesYes109
45R:R:I336 R:R:R340 12.78143.76NoYes079
46R:R:F107 R:R:R340 19.64177.48NoYes089
47R:R:F107 R:R:M153 16.47133.73NoYes088
48R:R:F386 R:R:W390 30.55159.02NoYes199
49R:R:F386 R:R:M352 32.31657.46NoNo198
50R:R:M352 R:R:Y356 16.51793.59NoYes189
51R:R:R120 R:R:Y356 26.17568.23NoYes199
52R:R:R120 R:R:Y435 16.35146.17NoYes199
53R:R:M352 R:R:S117 15.95186.13NoNo189
54R:R:C355 R:R:S117 37.29853.44NoNo099
55R:R:C121 R:R:C355 35.3277.28NoNo099
56R:R:C121 R:R:F358 33.32894.19NoYes096
57R:R:F125 R:R:F358 16.97758.57NoYes466
58R:R:F125 R:R:K126 15.23919.93NoNo066
59R:R:K126 R:R:W129 10.94982.32NoNo066
60R:R:H394 R:R:Y393 14.44658.71YesYes199
61R:R:F345 R:R:H394 29.938721.5NoYes199
62R:R:F345 R:R:T391 28.9536.49NoNo096
63R:R:A379 R:R:Y356 19.35534NoYes079
64R:R:V382 R:R:Y356 16.33143.79NoYes089
65R:R:V382 R:R:Y435 16.55123.79NoYes089
66R:R:V383 R:R:Y356 10.94985.05NoYes089
67R:R:A379 R:R:V360 17.23721.7NoNo076
68R:R:T375 R:R:V360 10.80333.17NoNo076
69R:R:P392 R:R:T391 25.92915.25NoNo096
70R:R:C420 R:R:P392 22.8523.77NoNo069
71R:R:C420 R:R:F396 21.28689.78NoNo064
72R:R:F396 R:R:L413 19.70169.74NoYes047
73R:R:L409 R:R:T407 10.18381.47NoNo037
74R:R:L409 R:R:T403 11.83562.95NoNo032
75R:R:G410 R:R:T403 13.47411.82NoNo032
76R:R:G410 R:R:L413 15.09921.71NoYes037
77R:R:S117 R:R:Y356 23.29835.09NoYes199
78R:R:H394 R:R:W390 23.25165.29YesYes199
79R:R:I116 R:R:R120 10.19716.26YesNo199
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
R:R:L30 R:R:L79 4.15 0 No No 6 6 1 2
L:L:?1 R:R:L30 6.66 1 Yes No 0 6 0 1
R:R:I102 R:R:S74 4.64 0 No No 8 9 1 2
R:R:F77 R:R:I98 5.02 0 No Yes 8 8 2 1
L:L:?1 R:R:S78 10.32 1 Yes No 0 8 0 1
L:L:?1 R:R:H81 22.98 1 Yes No 0 7 0 1
R:R:I98 R:R:L94 4.28 1 Yes No 8 8 1 2
R:R:I98 R:R:P99 3.39 1 Yes No 8 8 1 1
L:L:?1 R:R:I98 3.93 1 Yes Yes 0 8 0 1
R:R:P99 R:R:R161 12.97 1 No Yes 8 8 1 1
L:L:?1 R:R:P99 7.9 1 Yes No 0 8 0 1
R:R:S100 R:R:V157 6.46 0 No Yes 8 9 2 1
L:L:?1 R:R:I102 3.93 1 Yes No 0 8 0 1
R:R:V103 R:R:V157 4.81 1 No Yes 5 9 1 1
L:L:?1 R:R:V103 4.1 1 Yes No 0 5 0 1
R:R:F107 R:R:R340 7.48 0 No Yes 8 9 2 1
R:R:V157 R:R:Y174 3.79 1 Yes No 9 7 1 1
R:R:R340 R:R:V157 3.92 1 Yes Yes 9 9 1 1
L:L:?1 R:R:V157 5.12 1 Yes Yes 0 9 0 1
R:R:C172 R:R:R161 4.18 0 No Yes 8 8 2 1
L:L:?1 R:R:R161 4.18 1 Yes Yes 0 8 0 1
L:L:?1 R:R:Y174 11.28 1 Yes No 0 7 0 1
R:R:I336 R:R:R340 3.76 0 No Yes 7 9 2 1
L:L:?1 R:R:R340 4.18 1 Yes Yes 0 9 0 1
R:R:W390 R:R:Y393 5.79 1 Yes Yes 9 9 2 1
R:R:H394 R:R:W390 5.29 1 Yes Yes 9 9 2 2
R:R:A424 R:R:W390 7.78 1 No Yes 9 9 2 2
R:R:H394 R:R:Y393 8.71 1 Yes Yes 9 9 2 1
R:R:A424 R:R:Y393 4 1 No Yes 9 9 2 1
L:L:?1 R:R:Y393 21.76 1 Yes Yes 0 9 0 1
L:L:?1 R:R:G397 3.53 1 Yes No 0 8 0 1
L:L:?1 R:R:D417 9.33 1 Yes No 0 8 0 1
L:L:?1 R:R:H418 6.19 1 Yes No 0 4 0 1
L:L:?1 R:R:I421 16.68 1 Yes No 0 4 0 1
R:R:G86 R:R:H81 3.18 0 No No 7 7 2 1
R:R:A422 R:R:L30 3.15 0 No No 8 6 2 1
R:R:G397 R:R:T337 1.82 0 No No 8 7 1 2
R:R:G173 R:R:R161 1.5 0 No Yes 1 8 2 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 9IPV_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3.27
Number of Linked Nodes 258
Number of Links 285
Number of Hubs 31
Number of Links mediated by Hubs 128
Number of Communities 8
Number of Nodes involved in Communities 49
Number of Links involved in Communities 65
Path Summary
Number Of Nodes in MetaPath 80
Number Of Links MetaPath 79
Number of Shortest Paths 35515
Length Of Smallest Path 3
Average Path Length 12.8192
Length of Longest Path 32
Minimum Path Strength 1.36
Average Path Strength 6.41239
Maximum Path Strength 18.7375
Minimum Path Correlation 0.7
Average Path Correlation 0.924603
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 4.54545
Average % Of Corr. Nodes 50.3959
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 39.5963
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain   • Ras-like P-loop GTPases
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain   • Ras-like P-loop GTPases
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
Code_L_
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
Code_L_
Name
Synonyms
Identifier
Formula
Molecular Weight
SMILES
PubChem
Formal Charge
Total Atoms
Total Chiral Atoms
Total Bonds
Total Aromatic Bonds

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtQ16581
Sequence
>9IPV_nogp_Chain_R
EPPVILSMV ILSLTFLLG LPGNGLVLW VAGLKMQRT VNTIWFLHL 
TLADLLCCL SLPFSLAHL ALQGQWPYG RFLCKLIPS IIVLNMFAS 
VFLLTAISL DRCLVVFKP IWCQNHRNV GMACSICGC IWVVAFVMC 
IPVFVYREI FTHNRCGYT PLVAITITR LVVGFLLPS VIMIACYSF 
IVFRMQRGR FAKSQSKTF RVAVVVVAV FLVCWTPYH IFGVLSLLT 
DPETPLGKT LMSWDHVCI ALASANSCF NPFLYALLG KDFRKKARQ 
SIQGILE


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
8HK2APeptideComplement PeptideC3aBHomo sapiensC3a-Gi1/β1/γ22.92023-05-10doi.org/10.1038/s41589-023-01339-w
8HK2 (No Gprot) APeptideComplement PeptideC3aBHomo sapiensC3a-2.92023-05-10doi.org/10.1038/s41589-023-01339-w
8HK3APeptideComplement PeptideC3aBHomo sapiens--Gi1/β1/γ23.22023-05-10doi.org/10.1038/s41589-023-01339-w
8HK3 (No Gprot) APeptideComplement PeptideC3aBHomo sapiens--3.22023-05-10doi.org/10.1038/s41589-023-01339-w
8IA8APeptideComplement PeptideC3aBHomo sapiensE7 peptide-Gi1/β1/γ22.862023-05-24To be published
8IA8 (No Gprot) APeptideComplement PeptideC3aBHomo sapiensE7 peptide-2.862023-05-24To be published
8I95APeptideComplement PeptideC3aBHomo sapiensEP54-Go/β1/γ22.882023-10-18doi.org/10.1016/j.cell.2023.09.020
8I95 (No Gprot) APeptideComplement PeptideC3aBHomo sapiensEP54-2.882023-10-18doi.org/10.1016/j.cell.2023.09.020
8I97APeptideComplement PeptideC3aBHomo sapiens--Go/β1/γ23.12023-10-18doi.org/10.1016/j.cell.2023.09.020
8I97 (No Gprot) APeptideComplement PeptideC3aBHomo sapiens--3.12023-10-18doi.org/10.1016/j.cell.2023.09.020
8I9AAPeptideComplement PeptideC3aBHomo sapiensEP54-chim(NtGi1-Gs-CtGq)/β1/γ23.572023-10-18doi.org/10.1016/j.cell.2023.09.020
8I9A (No Gprot) APeptideComplement PeptideC3aBHomo sapiensEP54-3.572023-10-18doi.org/10.1016/j.cell.2023.09.020
8I9LAPeptideComplement PeptideC3aBHomo sapiensC3a-Go/β1/γ23.182023-10-18doi.org/10.1016/j.cell.2023.09.020
8I9L (No Gprot) APeptideComplement PeptideC3aBHomo sapiensC3a-3.182023-10-18doi.org/10.1016/j.cell.2023.09.020
8I9SAPeptideComplement PeptideC3aBHomo sapiens--Go/β1/γ23.262023-10-18doi.org/10.1016/j.cell.2023.09.020
8I9S (No Gprot) APeptideComplement PeptideC3aBHomo sapiens--3.262023-10-18doi.org/10.1016/j.cell.2023.09.020
8J6DAPeptideComplement PeptideC3aBHomo sapiensEP141-Go/β1/γ23.12023-10-18doi.org/10.1016/j.cell.2023.09.020
8J6D (No Gprot) APeptideComplement PeptideC3aBHomo sapiensEP141-3.12023-10-18doi.org/10.1016/j.cell.2023.09.020
9KVPAPeptideComplement PeptideC3aBHomo sapiensSB290157-Go/β1/γ22.792025-11-2610.1101/2025.05.26.656101
9KVP (No Gprot) APeptideComplement PeptideC3aBHomo sapiensSB290157-2.792025-11-2610.1101/2025.05.26.656101
9KZ2APeptideComplement PeptideC3aBHomo sapiensEP67-Go/β1/γ23.432025-11-2610.1101/2025.05.26.656101
9KZ2 (No Gprot) APeptideComplement PeptideC3aBHomo sapiensEP67-3.432025-11-2610.1101/2025.05.26.656101
9KZ8APeptideComplement PeptideC3aBMus musculusEP67-Go/β1/γ23.32025-11-2610.1101/2025.05.26.656101
9KZ8 (No Gprot) APeptideComplement PeptideC3aBMus musculusEP67-3.32025-11-2610.1101/2025.05.26.656101
9KZKAPeptideComplement PeptideC3aBMus musculusC3a (fragment)-Go/β1/γ23.542025-11-2610.1101/2025.05.26.656101
9KZK (No Gprot) APeptideComplement PeptideC3aBMus musculusC3a (fragment)-3.542025-11-2610.1101/2025.05.26.656101
9L0HAPeptideComplement PeptideC3aBMus musculusJR14a-Go/β1/γ23.572025-11-2610.1101/2025.05.26.656101
9L0H (No Gprot) APeptideComplement PeptideC3aBMus musculusJR14a-3.572025-11-2610.1101/2025.05.26.656101
9UMJAPeptideComplement PeptideC3aBMus musculusEP54-Go/β1/γ23.382025-11-2610.1101/2025.05.26.656101
9UMJ (No Gprot) APeptideComplement PeptideC3aBMus musculusEP54-3.382025-11-2610.1101/2025.05.26.656101
9IPVAPeptideComplement PeptideC3aBHomo sapiensJR14a-Gi1/β1/γ22.532025-04-23doi.org/10.1038/s44318-025-00429-w
9IPV (No Gprot) APeptideComplement PeptideC3aBHomo sapiensJR14a-2.532025-04-23doi.org/10.1038/s44318-025-00429-w
9IPYAPeptideComplement PeptideC3aBHomo sapiensJR14a--3.552025-04-23doi.org/10.1038/s44318-025-00429-w
9ISIAPeptideComplement PeptideC3aBHomo sapiens---3.562025-04-23doi.org/10.1038/s44318-025-00429-w
8ZWFAPeptideComplement PeptideC3aBHomo sapiensJR14a--32025-05-14doi.org/10.1038/s41421-024-00765-x
8ZWF (No Gprot) APeptideComplement PeptideC3aBHomo sapiensJR14a-32025-05-14doi.org/10.1038/s41421-024-00765-x
8ZWGAPeptideComplement PeptideC3aBHomo sapiensJR14a-Gi1/β1/γ22.872025-05-14doi.org/10.1038/s41421-024-00765-x
8ZWG (No Gprot) APeptideComplement PeptideC3aBHomo sapiensJR14a-2.872025-05-14doi.org/10.1038/s41421-024-00765-x
9KUTAPeptideComplement PeptideC3aBHomo sapiensJR14a-Go/β1/γ23.292025-11-2610.1101/2025.05.26.656101
9KUT (No Gprot) APeptideComplement PeptideC3aBHomo sapiensJR14a-3.292025-11-2610.1101/2025.05.26.656101
9KV6APeptideComplement PeptideC3aBMus musculusTLQP21-Go/β1/γ22.882025-11-2610.1101/2025.05.26.656101
9KV6 (No Gprot) APeptideComplement PeptideC3aBMus musculusTLQP21-2.882025-11-2610.1101/2025.05.26.656101
9KV8APeptideComplement PeptideC3aBMus musculusTLQP21-Go/β1/γ23.172025-11-2610.1101/2025.05.26.656101
9KV8 (No Gprot) APeptideComplement PeptideC3aBMus musculusTLQP21-3.172025-11-2610.1101/2025.05.26.656101




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 9IPV_nogp.zip



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