Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:M6 6.125400
2L:L:L8 6.085420
3L:L:R10 9.41610
4R:R:P22 6.6575404
5R:R:L30 4.10167636
6R:R:W60 5.61286708
7R:R:H63 6.57408
8R:R:L64 4.66419
9R:R:D68 6.942509
10R:R:L75 4.39833639
11R:R:W88 7.3529
12R:R:L94 4.53428
13R:R:I98 7.07833628
14R:R:I102 5.62428
15R:R:F107 7.53418
16R:R:L113 5.396518
17R:R:I116 4.2725419
18R:R:R134 7.082579
19R:R:W147 4.825409
20R:R:M153 5.505408
21R:R:Y160 6.17568
22R:R:R161 9.2425408
23R:R:R171 8.532551
24R:R:Y174 12.7025467
25R:R:F345 6.994519
26R:R:P348 4.8525409
27R:R:M352 6.2775418
28R:R:Y356 4.5975819
29R:R:V360 2.804506
30R:R:F386 6.688519
31R:R:W390 6.6825819
32R:R:Y393 8.582519
33R:R:F396 5.96404
34R:R:L413 4.8675487
35R:R:Y435 5.32167619
36R:R:F442 5.562549
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:E162 R:R:R92 12.398315.12NoNo051
2R:R:K96 R:R:R92 15.46897.43NoNo081
3R:R:F158 R:R:K96 18.522816.13NoNo088
4R:R:F158 R:R:S100 21.0295.28NoNo088
5R:R:S100 R:R:V157 23.5273.23NoNo089
6R:R:R161 R:R:V157 26.14943.92YesNo089
7R:R:P99 R:R:R161 31.203311.53NoYes088
8L:L:L8 R:R:P99 14.34024.93YesNo208
9L:L:L8 R:R:H81 25.06225.14YesNo007
10R:R:H81 R:R:R171 22.99583.39NoYes071
11R:R:R161 R:R:Y174 47.435718.52YesYes087
12L:L:M6 R:R:Y174 68.4738.38YesYes007
13L:L:M6 L:L:R10 72.21586.2YesYes000
14R:R:I98 R:R:P99 16.96276.77YesNo288
15R:R:L94 R:R:W88 10.66393.42YesYes289
16R:R:I98 R:R:W88 32.02497.05YesYes289
17L:L:L8 R:R:I102 21.25314.28YesYes208
18R:R:I102 R:R:I98 28.19924.42YesYes288
19L:L:R10 R:R:Y393 95.991713.38YesYes109
20L:L:R10 R:R:D417 83.66810.72YesNo008
21L:L:R10 R:R:R340 13.1955.33YesNo009
22R:R:D417 R:R:F396 82.4735.97NoYes084
23R:R:F396 R:R:W416 93.00422YesNo047
24R:R:P22 R:R:W416 90.43152.7YesNo047
25R:R:E20 R:R:P22 79.975112.58NoYes044
26R:R:E20 R:R:V23 77.31955.7NoNo044
27R:R:L82 R:R:V23 66.84657.45NoNo074
28R:R:H418 R:R:L82 58.57265.14NoNo047
29R:R:H418 R:R:S26 55.78424.18NoNo048
30R:R:L30 R:R:S26 52.97933YesNo068
31R:R:A422 R:R:L30 15.34443.15NoYes086
32R:R:A422 R:R:I29 12.30713.25NoNo087
33R:R:L30 R:R:L75 26.83826.92YesYes369
34R:R:F34 R:R:L75 17.97516.09NoYes379
35R:R:F34 R:R:L38 15.004110.96NoNo077
36R:R:I102 R:R:S74 50.697110.84YesNo089
37R:R:N105 R:R:S74 52.10794.47NoNo099
38R:R:C71 R:R:N105 56.53949.45NoNo089
39R:R:C71 R:R:S428 38.19096.89NoNo089
40R:R:D68 R:R:S428 37.5274.42YesNo099
41R:R:D68 R:R:N41 64.63076.73YesNo099
42R:R:N41 R:R:P432 61.991711.4NoNo099
43R:R:G40 R:R:P432 54.23244.06NoNo099
44R:R:G40 R:R:P39 43.31122.03NoNo097
45R:R:G37 R:R:P39 40.53942.03NoNo097
46R:R:C429 R:R:G37 34.94611.96NoNo099
47R:R:W390 R:R:Y393 88.73867.72YesYes199
48R:R:N427 R:R:W390 27.53537.91NoYes099
49R:R:N427 R:R:N431 26.340310.9NoNo099
50R:R:D68 R:R:N431 31.037310.77YesNo099
51R:R:L38 R:R:L73 11.96682.77NoNo078
52R:R:F386 R:R:W390 80.30718.02YesYes199
53R:R:F386 R:R:L113 76.60584.87YesYes198
54R:R:L113 R:R:Y435 68.10798.21YesYes189
55R:R:I116 R:R:Y435 1006.04YesYes199
56R:R:F61 R:R:I116 50.10793.77NoYes089
57R:R:A436 R:R:F61 47.75935.55NoNo088
58R:R:A436 R:R:F442 45.31122.77NoYes089
59R:R:F442 R:R:V47 21.77596.55YesNo098
60R:R:V47 R:R:W46 16.62242.45NoNo086
61R:R:S449 R:R:W46 11.13696.18NoNo096
62R:R:F442 R:R:M52 16.57269.95YesNo499
63R:R:M52 R:R:T58 13.93369.03NoNo098
64R:R:I116 R:R:W60 68.85483.52YesYes098
65R:R:V56 R:R:W60 10.73863.68NoYes088
66R:R:D119 R:R:W60 13.253114.52NoYes098
67R:R:I142 R:R:W60 13.62665.87NoYes058
68R:R:C143 R:R:W60 27.37763.92NoYes088
69R:R:C143 R:R:H63 24.713713.27NoYes088
70R:R:H63 R:R:W147 13.89217.41YesYes089
71R:R:L113 R:R:L64 10.53115.54YesYes189
72R:R:M106 R:R:W390 24.8054.65NoYes099
73R:R:F107 R:R:M153 21.78424.98YesYes088
74R:R:P348 R:R:V110 14.82993.53YesNo099
75R:R:F111 R:R:M153 13.13697.46NoYes088
76R:R:F386 R:R:M352 55.18679.95YesYes198
77R:R:M352 R:R:Y356 31.70124.79YesYes189
78R:R:R120 R:R:Y356 13.75935.14NoYes199
79R:R:M352 R:R:S117 31.1126.13YesNo189
80R:R:C355 R:R:S117 45.76766.89NoNo099
81R:R:C121 R:R:C355 42.60585.46NoNo099
82R:R:C121 R:R:F358 39.42744.19NoNo096
83R:R:F125 R:R:F358 29.784216.08NoNo066
84R:R:F125 R:R:K126 26.54772.48NoNo066
85R:R:K126 R:R:W129 16.71379.28NoNo066
86R:R:H133 R:R:W129 10.074712.7NoNo086
87R:R:I142 R:R:M138 11.14524.37NoNo056
88R:R:Y160 R:R:Y174 18.24916.88YesYes687
89R:R:L333 R:R:Y174 13.29467.03NoYes637
90R:R:F345 R:R:T391 41.86723.89YesNo096
91R:R:A379 R:R:Y356 28.67224NoYes079
92R:R:V383 R:R:Y356 15.85895.05NoYes089
93R:R:A379 R:R:V360 25.55191.7NoYes076
94R:R:C429 R:R:F430 23.56028.38NoNo097
95R:R:F430 R:R:V385 17.76763.93NoNo077
96R:R:L434 R:R:V385 14.83824.47NoNo097
97R:R:C420 R:R:F396 35.58519.78NoYes064
98R:R:C420 R:R:P392 36.26563.77NoNo069
99R:R:F396 R:R:L413 24.35686.09YesYes047
100R:R:L333 R:R:T337 11.612.95NoNo037
101R:R:D68 R:R:L64 46.75525.43YesYes099
102R:R:L64 R:R:Y435 39.21163.52YesYes199
103R:R:C71 R:R:M106 25.21164.86NoNo089
104R:R:L113 R:R:N431 11.24484.12YesNo089
105R:R:F107 R:R:W390 11.46895.01YesYes189
106R:R:Y356 R:R:Y435 24.84653.97YesYes199
107R:R:P392 R:R:T391 37.41915.25NoNo096
108R:R:F345 R:R:F386 44.2495.36YesYes199
109R:R:S117 R:R:Y356 17.79256.36NoYes199
110R:R:I116 R:R:R120 12.64733.76YesNo199
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:F3 R:R:E162 3.5 0 No No 0 5 0 1
L:L:F3 R:R:F164 17.15 0 No No 0 3 0 1
L:L:K4 R:R:P405 13.38 0 No No 0 4 0 1
L:L:P5 R:R:T166 10.49 5 No No 0 1 0 1
L:L:P5 R:R:R171 12.97 5 No Yes 0 1 0 1
L:L:M6 R:R:Y174 8.38 0 Yes Yes 0 7 0 1
L:L:L8 R:R:H81 5.14 2 Yes No 0 7 0 1
L:L:L8 R:R:I98 9.99 2 Yes Yes 0 8 0 1
L:L:L8 R:R:P99 4.93 2 Yes No 0 8 0 1
L:L:L8 R:R:I102 4.28 2 Yes Yes 0 8 0 1
L:L:?9 R:R:Y393 3.58 1 No Yes 0 9 0 1
L:L:?9 R:R:I421 11.61 1 No No 0 4 0 1
L:L:R10 R:R:R340 5.33 1 Yes No 0 9 0 1
L:L:R10 R:R:Y393 13.38 1 Yes Yes 0 9 0 1
L:L:R10 R:R:G397 6 1 Yes No 0 8 0 1
L:L:R10 R:R:D417 10.72 1 Yes No 0 8 0 1
R:R:I102 R:R:S74 10.84 2 Yes No 8 9 1 2
R:R:F77 R:R:I98 11.3 0 No Yes 8 8 2 1
R:R:H81 R:R:R171 3.39 0 No Yes 7 1 1 1
R:R:G86 R:R:R171 7.51 0 No Yes 7 1 2 1
R:R:I98 R:R:W88 7.05 2 Yes Yes 8 9 1 2
R:R:E162 R:R:R92 15.12 0 No No 5 1 1 2
R:R:I98 R:R:P99 6.77 2 Yes No 8 8 1 1
R:R:I102 R:R:I98 4.42 2 Yes Yes 8 8 1 1
R:R:P99 R:R:R161 11.53 2 No Yes 8 8 1 2
R:R:R340 R:R:V103 7.85 0 No No 9 5 1 2
R:R:F107 R:R:R340 14.97 1 Yes No 8 9 2 1
R:R:F107 R:R:W390 5.01 1 Yes Yes 8 9 2 2
R:R:F107 R:R:Y393 5.16 1 Yes Yes 8 9 2 1
R:R:Y160 R:R:Y174 16.88 6 Yes Yes 8 7 2 1
R:R:L333 R:R:Y160 3.52 6 No Yes 3 8 2 2
R:R:R161 R:R:Y174 18.52 0 Yes Yes 8 7 2 1
R:R:F164 R:R:T165 6.49 0 No No 3 4 1 2
R:R:R171 R:R:T166 11.64 5 Yes No 1 1 1 1
R:R:D167 R:R:R171 7.15 0 No Yes 3 1 2 1
R:R:L333 R:R:Y174 7.03 6 No Yes 3 7 2 1
R:R:W390 R:R:Y393 7.72 1 Yes Yes 9 9 2 1
R:R:H394 R:R:Y393 13.07 0 No Yes 9 9 2 1
R:R:D417 R:R:F396 5.97 0 No Yes 8 4 1 2
R:R:D417 R:R:I421 5.6 0 No No 8 4 1 1
R:R:D404 R:R:P405 3.22 0 No No 4 4 2 1
R:R:I101 R:R:I98 2.94 2 No Yes 5 8 2 1
R:R:I101 R:R:I102 2.94 2 No Yes 5 8 2 1
L:L:M6 R:R:S400 1.53 0 Yes No 0 2 0 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 8I9A_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3.23
Number of Linked Nodes 262
Number of Links 299
Number of Hubs 36
Number of Links mediated by Hubs 145
Number of Communities 8
Number of Nodes involved in Communities 48
Number of Links involved in Communities 65
Path Summary
Number Of Nodes in MetaPath 111
Number Of Links MetaPath 110
Number of Shortest Paths 45208
Length Of Smallest Path 3
Average Path Length 13.5179
Length of Longest Path 34
Minimum Path Strength 1.155
Average Path Strength 6.36189
Maximum Path Strength 17.7
Minimum Path Correlation 0.7
Average Path Correlation 0.920249
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 3.22581
Average % Of Corr. Nodes 48.086
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 43.7835
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeDAL
PDB ResiduesL:L:?9
Environment DetailsOpen EMBL-EBI Page
CodeDAL
NameD-Alanine
Synonyms(R)-alanine
Identifier
FormulaC3 H7 N O2
Molecular Weight89.093
SMILES
PubChem71080
Formal Charge0
Total Atoms13
Total Chiral Atoms1
Total Bonds12
Total Aromatic Bonds0

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtQ16581
Sequence
>8I9A_nogp_Chain_R
PWNEPPVIL SMVILSLTF LLGLPGNGL VLWVAGLKM QRTVNTIWF 
LHLTLADLL CCLSLPFSL AHLALQGQW PYGRFLCKL IPSIIVLNM 
FASVFLLTA ISLDRCLVV FKPIWCQNH RNVGMACSI CGCIWVVAF 
VMCIPVFVY REIFTTDNH NRCGYTPLV AITITRLVV GFLLPSVIM 
IACYSFIVF RMQSKTFRV AVVVVAVFL VCWTPYHIF GVLSLLTDP 
ETPLGKTLM SWDHVCIAL ASANSCFNP FLYALLGKD FRKKARQSI 
QG


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
8I95APeptideComplement PeptideC3aBHomo sapiensEP54-Go/β1/γ22.882023-10-18doi.org/10.1016/j.cell.2023.09.020
8I95 (No Gprot) APeptideComplement PeptideC3aBHomo sapiensEP54-2.882023-10-18doi.org/10.1016/j.cell.2023.09.020
8I97APeptideComplement PeptideC3aBHomo sapiens--Go/β1/γ23.12023-10-18doi.org/10.1016/j.cell.2023.09.020
8I97 (No Gprot) APeptideComplement PeptideC3aBHomo sapiens--3.12023-10-18doi.org/10.1016/j.cell.2023.09.020
8I9AAPeptideComplement PeptideC3aBHomo sapiensEP54-chim(NtGi1-Gs-CtGq)/β1/γ23.572023-10-18doi.org/10.1016/j.cell.2023.09.020
8I9A (No Gprot) APeptideComplement PeptideC3aBHomo sapiensEP54-3.572023-10-18doi.org/10.1016/j.cell.2023.09.020
8I9LAPeptideComplement PeptideC3aBHomo sapiensC3a anaphylatoxin-Go/β1/γ23.182023-10-18doi.org/10.1016/j.cell.2023.09.020
8I9L (No Gprot) APeptideComplement PeptideC3aBHomo sapiensC3a anaphylatoxin-3.182023-10-18doi.org/10.1016/j.cell.2023.09.020
8I9SAPeptideComplement PeptideC3aBHomo sapiens--Go/β1/γ23.262023-10-18doi.org/10.1016/j.cell.2023.09.020
8I9S (No Gprot) APeptideComplement PeptideC3aBHomo sapiens--3.262023-10-18doi.org/10.1016/j.cell.2023.09.020
8J6DAPeptideComplement PeptideC3aBHomo sapiensEP141-Go/β1/γ23.12023-10-18doi.org/10.1016/j.cell.2023.09.020
8J6D (No Gprot) APeptideComplement PeptideC3aBHomo sapiensEP141-3.12023-10-18doi.org/10.1016/j.cell.2023.09.020
8HK2APeptideComplement PeptideC3aBHomo sapiensC3a anaphylatoxin-Gi1/β1/γ22.92023-05-10doi.org/10.1038/s41589-023-01339-w
8HK2 (No Gprot) APeptideComplement PeptideC3aBHomo sapiensC3a anaphylatoxin-2.92023-05-10doi.org/10.1038/s41589-023-01339-w
8HK3APeptideComplement PeptideC3aBHomo sapiens--Gi1/β1/γ23.22023-05-10doi.org/10.1038/s41589-023-01339-w
8HK3 (No Gprot) APeptideComplement PeptideC3aBHomo sapiens--3.22023-05-10doi.org/10.1038/s41589-023-01339-w
8ZWFAPeptideComplement PeptideC3aBHomo sapiensJR14a--32025-05-14doi.org/10.1038/s41421-024-00765-x
8ZWGAPeptideComplement PeptideC3aBHomo sapiensJR14a-Gi1/β1/γ22.872025-05-14doi.org/10.1038/s41421-024-00765-x
8ZWG (No Gprot) APeptideComplement PeptideC3aBHomo sapiensJR14a-2.872025-05-14doi.org/10.1038/s41421-024-00765-x
9IPVAPeptideComplement PeptideC3aBHomo sapiensJR14a-Gi1/β1/γ22.532025-04-23doi.org/10.1038/s44318-025-00429-w
9IPV (No Gprot) APeptideComplement PeptideC3aBHomo sapiensJR14a-2.532025-04-23doi.org/10.1038/s44318-025-00429-w
9IPYAPeptideComplement PeptideC3aBHomo sapiensJR14a--3.552025-04-23doi.org/10.1038/s44318-025-00429-w
9ISIAPeptideComplement PeptideC3aBHomo sapiens---3.562025-04-23doi.org/10.1038/s44318-025-00429-w
8IA8APeptideComplement PeptideC3aBHomo sapiensE7 peptide-Gi1/β1/γ22.862023-05-24To be published
8IA8 (No Gprot) APeptideComplement PeptideC3aBHomo sapiensE7 peptide-2.862023-05-24To be published




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 8I9A_nogp.zip



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