Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:Y82 7.72667617
2R:R:F86 6.4325416
3R:R:L90 3.8175416
4R:R:F100 5.726526
5R:R:Y113 5.298507
6R:R:M114 5.914528
7R:R:D121 8.48667629
8R:R:F128 4.91518
9R:R:Y134 7.45333615
10R:R:H135 7.042515
11R:R:N139 7.6515
12R:R:W141 7.64167619
13R:R:Y143 7.175407
14R:R:Y156 8.2405
15R:R:N158 6.13833628
16R:R:Y160 7.465447
17R:R:F165 7.754537
18R:R:Q172 8.19408
19R:R:W199 11.6439
20R:R:L221 4.365403
21R:R:H227 6.55455
22R:R:D228 4.8375414
23R:R:F240 5.3475403
24R:R:Y242 8.99405
25R:R:F243 10.8275406
26R:R:P254 3.625409
27R:R:Y262 7.706509
28R:R:L288 5.12408
29R:R:M295 4.1875406
30R:R:Y296 6.25479
31R:R:H310 12.146554
32R:R:I314 4.416552
33R:R:V322 4.8225404
34R:R:Y323 7.095604
35R:R:Y326 12.4775454
36R:R:N336 6.2075429
37R:R:D340 7.47667629
38R:R:Y344 5.91778929
39R:R:Y345 5.8075407
40R:R:F346 5.225407
41R:R:V347 5.68407
42R:R:H354 6.9275465
43W:W:?1 11.8525830
44I:I:?1 8.204520
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:L69 R:R:Y323 28.81313.52NoYes044
2R:R:L69 R:R:N139 17.41766.87NoYes145
3R:R:N139 R:R:Y134 10.883610.47YesYes155
4R:R:W141 R:R:Y134 29.65578.68YesYes195
5R:R:W141 R:R:Y143 29.862315.43YesYes097
6R:R:I142 R:R:Y143 20.70527.25NoYes017
7R:R:I142 R:R:N140 19.15044.25NoNo014
8R:R:I223 R:R:N140 17.58938.5NoNo034
9R:R:I223 R:R:L221 16.02174.28NoYes033
10R:R:I218 R:R:L221 11.2818.56NoYes043
11R:R:D228 R:R:L69 11.37644.07YesNo144
12R:R:H135 R:R:Y134 10.886810.89YesYes155
13R:R:I327 R:R:L78 17.18234.28NoNo045
14R:R:H135 R:R:P79 12.37484.58YesNo055
15R:R:I136 R:R:P79 10.04745.08NoNo045
16R:R:F128 R:R:Y82 10.13966.19YesYes187
17R:R:I132 R:R:I136 10.10782.94NoNo074
18R:R:D340 R:R:M295 94.10194.16YesYes096
19R:R:F300 R:R:M295 96.34354.98NoYes096
20R:R:F300 R:R:I163 95.297413.82NoNo797
21R:R:I163 R:R:P254 97.2913.39NoYes079
22R:R:L164 R:R:P254 1003.28NoYes069
23R:R:I198 R:R:L164 60.61174.28NoNo076
24R:R:F165 R:R:I198 60.53868.79YesNo077
25R:R:C161 R:R:F165 29.99594.19NoYes077
26R:R:C161 W:W:?1 29.14694.64NoYes070
27R:R:F154 W:W:?1 48.930113.36NoYes350
28R:R:F154 R:R:W127 49.33077.02NoNo057
29R:R:L151 R:R:W127 47.80457.97NoNo057
30R:R:L151 R:R:W141 47.26084.56NoYes059
31R:R:F165 R:R:W199 29.81786.01YesYes379
32R:R:W199 W:W:?1 29.016620YesYes390
33R:R:D340 R:R:Y344 78.0775.75YesYes299
34R:R:A118 R:R:Y344 13.51944NoYes089
35R:R:A118 R:R:L97 12.44163.15NoNo087
36R:R:M114 R:R:Y344 61.60387.18YesYes289
37R:R:L169 R:R:M114 29.03254.24NoYes088
38R:R:L169 R:R:Y113 28.1393.52NoYes087
39R:R:Q172 R:R:Y113 15.36993.38YesYes087
40R:R:M114 R:R:V347 38.7816.09YesYes087
41R:R:C148 R:R:W141 11.32566.53NoYes199
42R:R:C148 R:R:T215 12.95033.38NoNo194
43R:R:H310 R:R:Y323 46.87617.62YesYes044
44R:R:H310 R:R:Y311 42.58376.53YesNo045
45R:R:F243 R:R:Y311 42.66959.28YesNo065
46R:R:F243 R:R:Y242 48.22112.38YesYes065
47R:R:L246 R:R:Y242 53.06354.69NoYes055
48R:R:L164 R:R:V250 55.484.47NoNo065
49R:R:L288 R:R:V347 27.41414.47YesYes087
50R:R:L288 R:R:Y262 11.39239.38YesYes089
51R:R:K187 R:R:Q172 11.32878.14NoYes068
52R:R:R173 R:R:V347 10.511610.46NoYes097
53R:R:K187 R:R:M181 10.33354.32NoNo065
54R:R:H310 R:R:I314 16.02176.63YesYes542
55R:R:I314 R:R:V236 13.23657.68YesNo023
56R:R:K315 R:R:V236 12.16813.04NoNo023
57R:R:F240 R:R:K315 10.01246.2YesNo032
58R:R:F346 R:R:L288 15.48123.65YesYes078
59R:R:I327 R:R:Y323 17.45577.25NoYes044
60R:R:L78 R:R:Y82 12.54654.69NoYes157
61R:R:L246 R:R:V250 47.07964.47NoNo455
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
R:R:F165 R:R:N116 14.5 3 Yes No 7 9 2 2
R:R:N116 R:R:W199 13.56 3 No Yes 9 9 2 1
R:R:L119 R:R:L123 6.92 0 No No 6 7 2 1
R:R:L119 R:R:W199 6.83 0 No Yes 6 9 2 1
R:R:F154 R:R:L123 3.65 3 No No 5 7 1 1
R:R:L123 W:W:?1 14.18 3 No Yes 7 0 1 0
R:R:F154 R:R:W127 7.02 3 No No 5 7 1 2
R:R:G153 R:R:Y210 5.79 0 No No 6 5 2 1
R:R:F154 W:W:?1 13.36 3 No Yes 5 0 1 0
R:R:A157 W:W:?1 10.37 0 No Yes 5 0 1 0
R:R:C161 R:R:F165 4.19 0 No Yes 7 7 1 2
R:R:C161 R:R:I202 4.91 0 No No 7 8 1 2
R:R:C161 W:W:?1 4.64 0 No Yes 7 0 1 0
R:R:F165 R:R:W199 6.01 3 Yes Yes 7 9 2 1
R:R:W199 W:W:?1 20 3 Yes Yes 9 0 1 0
R:R:L203 W:W:?1 10.13 0 No Yes 3 0 1 0
R:R:T206 R:R:Y210 4.99 0 No No 7 5 2 1
R:R:Y210 W:W:?1 18.87 0 No Yes 5 0 1 0
R:R:V211 W:W:?1 3.27 0 No Yes 3 0 1 0
R:R:L203 R:R:L204 2.77 0 No No 3 4 1 2
R:R:V211 R:R:V212 1.6 0 No No 3 4 1 2

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

ShowSimilarityNetwork TypeNameLigandDescription
36.36Single8U4RCholesterol8U4R-CXCR4-REGN7663-Fab-Cholesterol
33.33Single7FEEZCZ0117FEE-CB1-CP55940-ZCZ011
33.33Single8IKHQ2L8IKH-CB1-Q2L-Gi1/β1/γ1
21.43Single7WV9ZCZ0117WV9-CB1-CP55940-ZCZ011-Gi2/β1/γ2
21.43Single8G94CD698G94-S1P1-CD69-Gi1/β1/γ2
16.67Single6KQIOrg275696KQI-CB1-CP55940-Org27569
15.38Single8U4OCholesterol8U4O-CXCR4-CXCL12-Cholesterol-Gi1/β1/γ2
14.29Single8U4QCholesterol8U4Q-CXCR4-REGN7663-Fab-Cholesterol-Gi1/β1/γ2
9.09Single8JGBConorfamide-Tx28JGB-MRGPRX1-Conorfamide-Tx2-Gi1/β1/γ2
9.09Single8SAI1-Oleoyl-2-Hydroxy-Sn-Glycero-3-Phospho-L-Serine8SAI-GPR34-1-Oleoyl-2-Hydroxy-Sn-Glycero-3-Phospho-L-Serine-Gi1/β1/γ2
8.33Single8U4NCholesterol8U4N-CXCR4-Cholesterol-Gi1/β1/γ2
7.69Single8IKGQ2B8IKG-CB1-Q2B-Gi1/β1/γ1
7.69Single8T3O2Y58T3O-FFA4-TUG-891-2Y5-chim(NtGi2L-Gs-CtGq)/β1/γ2
7.69Single8U4PCholesterol8U4P-CXCR4-AMD3100-Cholesterol-Gi1/β1/γ2
6.25Single8T3VDocosa-4,7,10,13,16,19-Hexaenoic acid8T3V-FFA1-Docosa-4,7,10,13,16,19-Hexaenoic acid-chim(NtGi2L-Gs-CtGq)/β1/γ2
5.88Single8IYXYL-3658IYX-GPR34-YL-365
5.56Single7DB6Ramelteon7DB6-MT1-Ramelteon-Gi1/β1/γ2
5.56Single8XBGS3E-LysoPS8XBG-GPR34-S3E-LysoPS
5.00Single8XBIS3E-LysoPS8XBI-GPR34-S3E-LysoPS
5.00Single9GE2ML1849GE2-GPR55-ML184-Cholesterol-chim(CtGi1-G13)/β1/γ2
5.00Consensusffa_onOrthosteric Ligandffa2_on ffa3_on
5.00Consensusffa_on_gpOrthosteric Ligandffa2_on_gp ffa3_on_gp
5.00Consensusgi_ffaOrthosteric Ligand8J21-FFA3-Butyric acid-Gi1/β1/γ2 8J22-FFA2-TUG-1375-Gi1/β1/γ2
4.76Single8JPCNeurotensin-(8-13)8JPC-NTS1-Neurotensin-(8-13)-PubChem 118610427; GDP; Mg-Gq; GRK2
4.55Single8XBES3E-LysoPS8XBE-GPR34-S3E-LysoPS-Gi1/β1/γ1
4.55Single9GE3Lysophosphatidylinositol9GE3-GPR55-Lysophosphatidylinositol-chim(CtGi1-G13)/β1/γ2
4.35Single8J22TUG-13758J22-FFA2-TUG-1375-Gi1/β1/γ2
4.17Single8XBHS3E-LysoPS8XBH-GPR34-S3E-LysoPS-Gi1/β1/γ2
4.00Single8KH5Lysophosphatidylserine8KH5-GPR174-Lysophosphatidylserine-Gs/β1/γ2
3.85Single8XIQL7967788XIQ-SST3-L796778-chim(NtGi1-Gs-CtGi1)/β1/γ2
3.57Single7XV3Lysophosphatidylserine7XV3-GPR174-Lysophosphatidylserine-chim(NtGi1-Gs)/β1/γ2

PDB Summary
PDB 5NDZ
Class A
SubFamily Peptide
Type Proteinase Activated
SubType PAR2
Species Homo Sapiens
Ligand -
Other Ligand(s) AZ3451; Na
Protein Partners -
PDB Resolution 3.6
Date 2017-05-03
D.O.I. 10.1038/nature22309
Net Summary
Imin 3.28
Number of Linked Nodes 276
Number of Links 319
Number of Hubs 44
Number of Links mediated by Hubs 170
Number of Communities 7
Number of Nodes involved in Communities 60
Number of Links involved in Communities 86
Path Summary
Number Of Nodes in MetaPath 62
Number Of Links MetaPath 61
Number of Shortest Paths 57730
Length Of Smallest Path 3
Average Path Length 15.7981
Length of Longest Path 35
Minimum Path Strength 1.38
Average Path Strength 6.44553
Maximum Path Strength 19.975
Minimum Path Correlation 0.7
Average Path Correlation 0.925881
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 3.57143
Average % Of Corr. Nodes 44.8655
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 45.2837
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function• binding   • tetrapyrrole binding   • heme binding   • electron transfer activity   • cation binding   • transition metal ion binding   • iron ion binding   • ion binding   • metal ion binding   • small molecule binding   • protein binding   • G-protein alpha-subunit binding   • molecular transducer activity   • signaling receptor activity   • signaling receptor binding   • G protein-coupled receptor activity   • transmembrane signaling receptor activity   • enzyme binding   • protease binding   • peptide receptor activity   • thrombin-activated receptor activity   • proteinase-activated receptor activity   • G protein-coupled peptide receptor activity   • G-protein beta-subunit binding   • hydrolase activity, acting on glycosyl bonds   • peptidoglycan muralytic activity   • hydrolase activity, hydrolyzing O-glycosyl compounds   • lysozyme activity   • hydrolase activity   • catalytic activity   • electron transport chain   • metabolic process   • cellular process   • generation of precursor metabolites and energy   • multicellular organismal process   • regulation of body fluid levels   • wound healing   • response to stimulus   • hemostasis   • biological regulation   • blood coagulation   • response to stress   • coagulation   • regulation of biological quality
Gene OntologyBiological Process• electron transport chain   • metabolic process   • cellular process   • generation of precursor metabolites and energy   • multicellular organismal process   • regulation of body fluid levels   • wound healing   • response to stimulus   • hemostasis   • biological regulation   • blood coagulation   • response to stress   • coagulation   • regulation of biological quality   • response to wounding   • developmental process   • myeloid leukocyte differentiation   • cellular developmental process   • hemopoiesis   • cell development   • mononuclear cell differentiation   • myeloid cell differentiation   • cell differentiation   • anatomical structure development   • dendritic cell differentiation   • mature conventional dendritic cell differentiation   • leukocyte differentiation   • regulation of biological process   • regulation of cellular process   • reactive oxygen species metabolic process   • positive regulation of biological process   • regulation of superoxide metabolic process   • positive regulation of reactive oxygen species metabolic process   • superoxide metabolic process   • positive regulation of metabolic process   • superoxide anion generation   • positive regulation of superoxide anion generation   • regulation of superoxide anion generation   • regulation of metabolic process   • regulation of reactive oxygen species metabolic process   • positive regulation of cellular process   • cellular response to stimulus   • regulation of signaling   • signaling   • regulation of JNK cascade   • regulation of signal transduction   • regulation of MAPK cascade   • intracellular signal transduction   • cell communication   • regulation of intracellular signal transduction   • regulation of response to stimulus   • JNK cascade   • intracellular signaling cassette   • MAPK cascade   • regulation of cell communication   • signal transduction   • regulation of cellular component organization   • positive regulation of cellular component organization   • cell projection organization   • plasma membrane bounded cell projection assembly   • cellular component biogenesis   • cellular component organization   • pseudopodium assembly   • cellular component assembly   • positive regulation of cell projection organization   • cellular component organization or biogenesis   • plasma membrane bounded cell projection organization   • positive regulation of cellular component biogenesis   • regulation of cell projection organization   • regulation of cell projection assembly   • regulation of cellular component biogenesis   • regulation of plasma membrane bounded cell projection assembly   • positive regulation of pseudopodium assembly   • regulation of pseudopodium assembly   • cell projection assembly   • regulation of plasma membrane bounded cell projection organization   • positive regulation of plasma membrane bounded cell projection assembly   • pseudopodium organization   • chemotaxis   • positive regulation of locomotion   • regulation of response to external stimulus   • response to external stimulus   • regulation of chemotaxis   • positive regulation of chemotaxis   • positive regulation of response to stimulus   • positive regulation of response to external stimulus   • taxis   • response to chemical   • regulation of locomotion   • locomotion   • biological process involved in interspecies interaction between organisms   • immune response   • response to other organism   • defense response   • defense response to symbiont   • response to biotic stimulus   • immune system process   • defense response to other organism   • innate immune response   • response to external biotic stimulus   • positive regulation of cell communication   • positive regulation of response to biotic stimulus   • positive regulation of signal transduction   • pattern recognition receptor signaling pathway   • immune response-activating signaling pathway   • positive regulation of toll-like receptor 3 signaling pathway   • positive regulation of immune response   • regulation of immune system process   • positive regulation of immune system process   • innate immune response-activating signaling pathway   • positive regulation of pattern recognition receptor signaling pathway   • regulation of innate immune response   • positive regulation of intracellular signal transduction   • regulation of pattern recognition receptor signaling pathway   • positive regulation of defense response   • regulation of immune response   • activation of innate immune response   • activation of immune response   • regulation of defense response   • cytoplasmic pattern recognition receptor signaling pathway   • regulation of response to biotic stimulus   • intracellular receptor signaling pathway   • regulation of cytoplasmic pattern recognition receptor signaling pathway   • endolysosomal toll-like receptor signaling pathway   • immune response-regulating signaling pathway   • regulation of response to stress   • regulation of toll-like receptor 3 signaling pathway   • positive regulation of innate immune response   • toll-like receptor 3 signaling pathway   • positive regulation of signaling   • regulation of biosynthetic process   • chemokine (C-X-C motif) ligand 2 production   • regulation of macromolecule metabolic process   • gene expression   • macromolecule biosynthetic process   • regulation of chemokine production   • regulation of gene expression   • regulation of chemokine (C-X-C motif) ligand 2 production   • biosynthetic process   • regulation of cytokine production   • cytokine production   • chemokine production   • regulation of macromolecule biosynthetic process   • regulation of multicellular organismal process   • macromolecule metabolic process   • negative regulation of biological process   • negative regulation of chemokine production   • negative regulation of cellular process   • negative regulation of macromolecule metabolic process   • negative regulation of metabolic process   • negative regulation of cytokine production   • negative regulation of gene expression   • negative regulation of biosynthetic process   • negative regulation of macromolecule biosynthetic process   • negative regulation of multicellular organismal process   • interleukin-1 production   • regulation of interleukin-1 beta production   • positive regulation of macromolecule biosynthetic process   • positive regulation of interleukin-1 beta production   • positive regulation of biosynthetic process   • positive regulation of interleukin-1 production   • positive regulation of macromolecule metabolic process   • regulation of interleukin-1 production   • interleukin-1 beta production   • positive regulation of gene expression   • positive regulation of multicellular organismal process   • positive regulation of cytokine production   • positive regulation of interleukin-8 production   • interleukin-8 production   • regulation of interleukin-8 production   • positive regulation of JNK cascade   • positive regulation of MAPK cascade   • positive regulation of chemokine production   • system process   • renal system process   • regulation of renal system process   • regulation of blood pressure   • regulation of system process   • regulation of glomerular filtration   • positive regulation of glomerular filtration   • regulation of systemic arterial blood pressure   • circulatory system process   • renal system process involved in regulation of blood volume   • renal system process involved in regulation of systemic arterial blood pressure   • glomerular filtration   • blood circulation   • renal filtration   • negative regulation of signaling   • negative regulation of cytoplasmic pattern recognition receptor signaling pathway   • negative regulation of intracellular signal transduction   • negative regulation of cell communication   • negative regulation of toll-like receptor 3 signaling pathway   • negative regulation of response to stimulus   • negative regulation of signal transduction   • negative regulation of immune system process   • interleukin-10 production   • regulation of interleukin-10 production   • positive regulation of interleukin-10 production   • protein localization   • regulation of systemic arterial blood pressure by renin-angiotensin   • regulation of localization   • regulation of systemic arterial blood pressure by hormone   • establishment of protein localization   • nitrogen compound transport   • positive regulation of establishment of protein localization   • localization   • renal response to blood flow involved in circulatory renin-angiotensin regulation of systemic arterial blood pressure   • cellular macromolecule localization   • establishment of protein localization to extracellular region   • regulation of systemic arterial blood pressure by circulatory renin-angiotensin   • protein secretion   • establishment of localization   • positive regulation of renin secretion into blood stream   • regulation of protein secretion   • regulation of secretion   • positive regulation of protein localization   • regulation of endocrine process   • renin secretion into blood stream   • cellular localization   • regulation of systemic arterial blood pressure mediated by a chemical signal   • regulation of protein localization   • transport   • positive regulation of secretion by cell   • protein localization to extracellular region   • positive regulation of protein transport   • regulation of secretion by cell   • secretion by cell   • regulation of renin secretion into blood stream   • positive regulation of secretion   • signal release   • regulation of transport   • secretion   • regulation of establishment of protein localization   • export from cell   • cell-cell signaling   • regulation of protein transport   • positive regulation of protein secretion   • endocrine process   • positive regulation of transport   • protein transport   • regulation of cellular localization   • macromolecule localization   • cell activation   • lymphocyte activation   • cell activation involved in immune response   • leukocyte activation   • immune effector process   • T cell activation involved in immune response   • T cell activation   • leukocyte activation involved in immune response   • lymphocyte activation involved in immune response   • regulation of immune effector process   • regulation of myeloid leukocyte mediated immunity   • regulated exocytosis   • positive regulation of leukocyte mediated immunity   • leukocyte degranulation   • myeloid leukocyte mediated immunity   • vesicle-mediated transport   • myeloid leukocyte activation   • positive regulation of leukocyte degranulation   • positive regulation of regulated secretory pathway   • establishment of localization in cell   • leukocyte mediated immunity   • regulation of leukocyte mediated immunity   • exocytosis   • positive regulation of myeloid leukocyte mediated immunity   • eosinophil mediated immunity   • eosinophil activation   • positive regulation of exocytosis   • regulation of regulated secretory pathway   • regulation of eosinophil degranulation   • positive regulation of eosinophil degranulation   • eosinophil degranulation   • positive regulation of immune effector process   • eosinophil activation involved in immune response   • regulation of leukocyte degranulation   • regulation of vesicle-mediated transport   • myeloid cell activation involved in immune response   • regulation of exocytosis   • granulocyte activation   • defense response to virus   • response to virus   • positive regulation of DNA-templated transcription   • RNA metabolic process   • regulation of primary metabolic process   • nucleobase-containing compound metabolic process   • RNA biosynthetic process   • nucleic acid biosynthetic process   • DNA-templated transcription   • regulation of RNA metabolic process   • transcription by RNA polymerase II   • regulation of nucleobase-containing compound metabolic process   • regulation of RNA biosynthetic process   • regulation of transcription by RNA polymerase II   • positive regulation of nucleobase-containing compound metabolic process   • primary metabolic process   • positive regulation of transcription by RNA polymerase II   • nucleobase-containing compound biosynthetic process   • nucleic acid metabolic process   • positive regulation of RNA metabolic process   • positive regulation of RNA biosynthetic process   • regulation of DNA-templated transcription   • regulation of cell motility   • positive regulation of cell migration   • positive regulation of cell motility   • regulation of cell migration   • cell migration   • cell motility   • cell chemotaxis   • regulation of leukocyte chemotaxis   • regulation of leukocyte migration   • positive regulation of leukocyte chemotaxis   • positive regulation of leukocyte migration   • leukocyte migration   • cellular response to chemical stimulus   • leukocyte chemotaxis   • cell population proliferation   • leukocyte proliferation   • positive regulation of cytosolic calcium ion concentration   • positive regulation of canonical NF-kappaB signal transduction   • canonical NF-kappaB signal transduction   • regulation of canonical NF-kappaB signal transduction   • immune response-regulating cell surface receptor signaling pathway   • cell surface toll-like receptor signaling pathway   • immune response-activating cell surface receptor signaling pathway   • regulation of toll-like receptor 4 signaling pathway   • positive regulation of toll-like receptor 4 signaling pathway   • innate immune response activating cell surface receptor signaling pathway   • cell surface pattern recognition receptor signaling pathway   • cell surface receptor signaling pathway   • toll-like receptor 4 signaling pathway   • positive regulation of ERK1 and ERK2 cascade   • ERK1 and ERK2 cascade   • regulation of ERK1 and ERK2 cascade   • import into cell   • positive regulation of membrane invagination   • positive regulation of endocytosis   • regulation of phagocytosis, engulfment   • membrane invagination   • phagocytosis   • plasma membrane invagination   • regulation of endocytosis   • membrane organization   • regulation of phagocytosis   • phagocytosis, engulfment   • positive regulation of phagocytosis   • positive regulation of phagocytosis, engulfment   • regulation of membrane invagination   • endocytosis   • positive regulation of organelle organization   • regulation of cytoskeleton organization   • regulation of actin filament-based process   • regulation of cellular component size   • protein-containing complex disassembly   • positive regulation of actin filament depolymerization   • regulation of protein-containing complex disassembly   • actin filament depolymerization   • regulation of actin filament depolymerization   • actin filament-based process   • positive regulation of protein-containing complex disassembly   • cellular component disassembly   • actin polymerization or depolymerization   • regulation of actin filament organization   • actin cytoskeleton organization   • protein-containing complex organization   • regulation of protein depolymerization   • positive regulation of protein depolymerization   • positive regulation of cytoskeleton organization   • actin filament organization   • regulation of actin polymerization or depolymerization   • positive regulation of supramolecular fiber organization   • regulation of organelle organization   • organelle organization   • regulation of actin filament length   • regulation of actin cytoskeleton organization   • regulation of supramolecular fiber organization   • supramolecular fiber organization   • protein depolymerization   • cytoskeleton organization   • regulation of anatomical structure size   • interleukin-6 production   • positive regulation of interleukin-6 production   • regulation of interleukin-6 production   • neutrophil-mediated killing of symbiont cell   • regulation of killing of cells of another organism   • disruption of cell in another organism   • regulation of programmed cell death   • positive regulation of neutrophil mediated cytotoxicity   • positive regulation of leukocyte mediated cytotoxicity   • response to bacterium   • positive regulation of neutrophil mediated killing of symbiont cell   • regulation of neutrophil mediated killing of gram-negative bacterium   • biological process involved in interaction with symbiont   • killing of cells of another organism   • positive regulation of programmed cell death   • leukocyte mediated cytotoxicity   • cell death   • positive regulation of neutrophil mediated killing of bacterium   • regulation of cell killing   • positive regulation of cell killing   • disruption of anatomical structure in another organism   • positive regulation of killing of cells of another organism   • positive regulation of neutrophil mediated killing of gram-negative bacterium   • defense response to Gram-negative bacterium   • biological process involved in symbiotic interaction   • regulation of neutrophil mediated killing of bacterium   • defense response to bacterium   • positive regulation of defense response to bacterium   • neutrophil mediated immunity   • modulation of process of another organism   • regulation of biological process involved in symbiotic interaction   • regulation of defense response to bacterium   • neutrophil-mediated killing of bacterium   • neutrophil mediated cytotoxicity   • regulation of neutrophil mediated cytotoxicity   • regulation of leukocyte mediated cytotoxicity   • regulation of neutrophil mediated killing of symbiont cell   • killing by host of symbiont cells   • neutrophil-mediated killing of gram-negative bacterium   • programmed cell death   • cell killing   • positive regulation of molecular function   • regulation of molecular function   • positive regulation of hydrolase activity   • regulation of catalytic activity   • regulation of hydrolase activity   • positive regulation of catalytic activity   • regulation of GTPase activity   • positive regulation of GTPase activity   • neutrophil activation   • regulation of toll-like receptor 2 signaling pathway   • positive regulation of toll-like receptor 2 signaling pathway   • toll-like receptor 2 signaling pathway   • small GTPase-mediated signal transduction   • regulation of small GTPase mediated signal transduction   • Rho protein signal transduction   • regulation of Rho protein signal transduction   • positive regulation of Rho protein signal transduction   • positive regulation of small GTPase mediated signal transduction   • regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction   • positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction   • phosphatidylinositol 3-kinase/protein kinase B signal transduction   • negative regulation of protein transport   • negative regulation of transport   • negative regulation of secretion   • negative regulation of hormone secretion   • negative regulation of secretion by cell   • regulation of peptide hormone secretion   • negative regulation of peptide hormone secretion   • regulation of hormone levels   • negative regulation of establishment of protein localization   • negative regulation of protein secretion   • regulation of hormone secretion   • regulation of peptide secretion   • hormone secretion   • negative regulation of peptide secretion   • peptide secretion   • amide transport   • negative regulation of protein localization   • regulation of peptide transport   • peptide transport   • negative regulation of insulin secretion   • regulation of insulin secretion   • peptide hormone secretion   • hormone transport   • insulin secretion   • negative regulation of JNK cascade   • negative regulation of MAPK cascade   • regulation of tube diameter   • regulation of tube size   • vascular process in circulatory system   • blood vessel diameter maintenance   • vasodilation   • positive chemotaxis   • positive regulation of positive chemotaxis   • regulation of positive chemotaxis   • epithelium development   • endothelial cell differentiation   • endothelium development   • tissue development   • epithelial cell differentiation   • endothelial cell development   • epithelial cell development   • establishment of endothelial barrier   • cell junction maintenance   • cell junction organization   • cellular component maintenance   • cell-cell junction maintenance   • cell-cell junction organization   • inflammatory response   • G protein-coupled receptor signaling pathway   • regulation of blood coagulation   • regulation of coagulation   • regulation of response to wounding   • regulation of wound healing   • regulation of hemostasis   • cytokine production involved in immune response   • production of molecular mediator of immune response   • regulation of cytokine production involved in immune response   • positive regulation of cytokine production involved in immune response   • positive regulation of production of molecular mediator of immune response   • regulation of production of molecular mediator of immune response   • response to cytokine   • cytokine-mediated signaling pathway   • cellular response to tumor necrosis factor   • tumor necrosis factor-mediated signaling pathway   • cellular response to cytokine stimulus   • regulation of tumor necrosis factor-mediated signaling pathway   • regulation of cytokine-mediated signaling pathway   • negative regulation of tumor necrosis factor-mediated signaling pathway   • response to peptide   • regulation of response to cytokine stimulus   • negative regulation of response to cytokine stimulus   • negative regulation of cytokine-mediated signaling pathway   • response to tumor necrosis factor   • regulation of type II interferon production   • type II interferon production   • positive regulation of type II interferon production   • carbohydrate derivative catabolic process   • catabolic process   • peptidoglycan catabolic process   • glycosaminoglycan metabolic process   • carbohydrate derivative metabolic process   • aminoglycan catabolic process   • macromolecule catabolic process   • glycosaminoglycan catabolic process   • aminoglycan metabolic process   • peptidoglycan metabolic process   • symbiont-mediated cytolysis of host cell   • viral life cycle   • cytolysis   • biological process involved in interaction with host   • viral release from host cell by cytolysis   • exit from host cell   • viral process   • cytolysis in another organism   • viral release from host cell   • symbiont-mediated killing of host cell   • cell wall organization or biogenesis   • cell wall macromolecule catabolic process   • cell wall macromolecule metabolic process   • cellular anatomical structure   • periplasmic space   • cell projection   • pseudopodium   • plasma membrane bounded cell projection   • membrane-bounded organelle   • intracellular organelle   • intracellular anatomical structure   • Golgi apparatus   • organelle   • cytoplasm   • intracellular membrane-bounded organelle   • endomembrane system   • cell periphery
Gene OntologyCellular Component• cellular anatomical structure   • periplasmic space   • cell projection   • pseudopodium   • plasma membrane bounded cell projection   • membrane-bounded organelle   • intracellular organelle   • intracellular anatomical structure   • Golgi apparatus   • organelle   • cytoplasm   • intracellular membrane-bounded organelle   • endomembrane system   • cell periphery   • plasma membrane   • membrane   • early endosome   • endosome   • intracellular vesicle   • cytoplasmic vesicle   • vesicle   • host cellular component   • host intracellular part   • host cell cytoplasm   • host cell part   • host intracellular region
SCOP2Domain Identifier• Cytochromes   • G protein-coupled receptor-like
SCOP2Family Identifier• Cytochromes   • G protein-coupled receptor-like
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
Code8UN
PDB ResiduesW:W:?1
Environment DetailsOpen EMBL-EBI Page
Code8UN
Name2-(6-bromanyl-1,3-benzodioxol-5-yl)-~{N}-(4-cyanophenyl)-1-[(1~{S})-1-cyclohexylethyl]benzimidazole-5-carboxamide
Synonyms
Identifier
FormulaC30 H27 Br N4 O3
Molecular Weight571.464
SMILES
PubChem126961335
Formal Charge0
Total Atoms65
Total Chiral Atoms1
Total Bonds70
Total Aromatic Bonds22

CodeNA
PDB ResiduesI:I:?1
Environment DetailsOpen EMBL-EBI Page
CodeNA
NameSODIUM ION
Synonyms
Identifier
FormulaNa
Molecular Weight22.99
SMILES
PubChem
Formal Charge1
Total Atoms1
Total Chiral Atoms0
Total Bonds0
Total Aromatic Bonds0

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP55085
Sequence
>5NDZ_Chain_R
FSVDEFSAS VLTGKLTTV FLPIVYTIV FVVALPSNG MALWVFLFR 
TKKKAPAVI YMANLALAD LLSVIWFPL KIAYHIHGN NWIYGEALC 
NVLIGFFYA NMYCSILFL TCLSVQRAW EIVNPMGHS RKKANIAIG 
ISLAIWLLI LLVTIPLYV VKQTIFIPA LQITTCHDV LPEQLLVGD 
MFNYFLSLA IGVFLFPAF LTASAYVLM IRALENSEK KRKRAIKLA 
VTVAAMYLI CFTPSNLLL VVHYFLIKS QGQSHVYAL YIVALCLST 
LNSCIDPFV YYFVSHDFR DHAKNAL


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
5NJ6APeptideProteinase ActivatedPAR2Homo sapiens---42017-05-0310.1038/nature22309
5NDZAPeptideProteinase ActivatedPAR2Homo sapiens-AZ3451; Na-3.62017-05-0310.1038/nature22309
5NDDAPeptideProteinase ActivatedPAR2Homo sapiens-AZ8838; Na-2.82017-05-0310.1038/nature22309




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Download 5NDZ.zip



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