Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:Y50 7.28517
2R:R:V67 3.3875407
3R:R:I68 3.1325427
4R:R:Y81 5.982527
5R:R:I82 3.0975428
6R:R:L85 5.7429
7R:R:D89 7.51629
8R:R:F92 8.538516
9R:R:M93 3.1575466
10R:R:W108 9.124558
11R:R:F110 5.35406
12R:R:M119 3.6275405
13R:R:D122 7.4425416
14R:R:N125 5.1975407
15R:R:Q126 7.31517
16R:R:F127 4.645406
17R:R:Y141 7.535488
18R:R:H146 3.9175485
19R:R:W167 8.534549
20R:R:I174 4.7575407
21R:R:R190 2.938591
22R:R:W197 8.44857735
23R:R:F208 7.098537
24R:R:I223 3.0225406
25R:R:Y228 6.906579
26R:R:C268 2.36408
27R:R:W269 8.96333608
28R:R:F272 8.93416
29R:R:Y273 5.8675417
30R:R:F275 4.6175414
31R:R:L290 3.9425414
32R:R:F294 11.0875414
33R:R:D295 3.78412
34R:R:V299 7.0975405
35R:R:Y302 10.0175417
36R:R:N308 8.08429
37R:R:P309 4.5075429
38R:R:Y312 5.482529
39L:L:?1 9.464551110
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:V299 R:R:Y50 10.420417.66YesYes057
2R:R:V298 R:R:Y50 32.85225.05NoYes167
3L:L:?1 R:R:Y302 29.10926.56YesYes107
4L:L:?1 R:R:V298 34.54334.76YesNo106
5R:R:M93 R:R:S305 13.38523.07YesNo068
6R:R:F92 R:R:S305 1005.28YesNo068
7R:R:D122 R:R:F92 26.05314.78YesYes166
8L:L:?1 R:R:D122 25.853113.02YesYes106
9R:R:F92 R:R:Q126 61.37468.2YesYes167
10L:L:?1 R:R:Q126 70.05179.58YesYes107
11R:R:F92 R:R:Y302 29.952619.6YesYes167
12R:R:D89 R:R:S305 91.861910.31YesNo098
13R:R:D89 R:R:P309 36.93433.22YesYes299
14R:R:Q126 R:R:W269 61.54415.48YesYes078
15R:R:N304 R:R:W269 56.818713.56NoYes098
16R:R:N304 R:R:N308 53.10189.54NoYes099
17R:R:N308 R:R:P309 25.19246.52YesYes299
18R:R:P309 R:R:V64 59.70531.77YesNo299
19R:R:I68 R:R:V64 45.83751.54YesNo279
20R:R:F319 R:R:I68 39.40793.77NoYes087
21R:R:F319 R:R:V67 16.45879.18NoYes087
22R:R:I82 R:R:V64 11.64631.54YesNo289
23R:R:M136 R:R:Y81 20.96684.79NoYes297
24R:R:L85 R:R:M136 21.86245.65YesNo299
25R:R:D89 R:R:L85 56.63618.14YesYes299
26R:R:L85 R:R:N308 35.87365.49YesYes299
27R:R:N125 R:R:W167 18.26283.39YesYes079
28R:R:F92 R:R:N125 23.06224.83YesYes067
29R:R:L85 R:R:Y312 68.64763.52YesYes299
30L:L:?1 R:R:M119 66.93.39YesYes005
31R:R:C193 R:R:M119 49.66314.86NoYes095
32R:R:C193 R:R:W108 38.60816.98NoYes598
33R:R:F110 R:R:W108 23.1111.02YesYes068
34R:R:H107 R:R:P109 16.30669.15NoNo044
35R:R:F110 R:R:P109 18.60192.89YesNo064
36R:R:F127 R:R:Q126 83.65439.37YesYes067
37R:R:F127 R:R:I174 52.19323.77YesYes067
38R:R:F127 R:R:V173 29.84833.93YesNo064
39R:R:I130 R:R:W269 14.498110.57NoYes088
40R:R:I130 R:R:P220 13.33743.39NoNo089
41R:R:R140 R:R:Y228 61.95718.23NoYes099
42R:R:R140 R:R:Y312 63.84387.2NoYes099
43R:R:S137 R:R:Y228 47.25477.63NoYes799
44R:R:C227 R:R:S137 45.1551.72NoNo079
45R:R:C227 R:R:Y141 42.95538.06NoYes078
46R:R:V145 R:R:Y141 11.272412.62NoYes878
47R:R:H146 R:R:Y141 22.79273.27YesYes858
48R:R:L142 R:R:S150 16.11967.51NoNo045
49R:R:H146 R:R:S150 18.42372.79YesNo055
50R:R:L142 R:R:W153 13.80692.28NoNo043
51R:R:T158 R:R:W153 11.48556.06NoNo053
52R:R:V173 R:R:Y211 23.58393.79NoNo344
53R:R:I174 R:R:I177 46.65047.36YesNo073
54R:R:F208 R:R:Y211 22.9974.13YesNo374
55R:R:F208 R:R:I177 22.94483.77YesNo073
56R:R:F208 R:R:W197 38.30814.03YesYes375
57R:R:I177 R:R:I195 22.80575.89NoNo035
58R:R:I195 R:R:W197 19.18019.4NoYes055
59R:R:H107 R:R:R190 11.68982.26NoYes041
60R:R:W197 R:R:Y205 34.73032.89YesNo054
61R:R:V280 R:R:Y205 31.01777.57NoNo044
62R:R:I209 R:R:V280 19.449610.75NoNo054
63R:R:F314 R:R:F323 11.80724.29NoNo076
64R:R:F319 R:R:F323 21.20164.29NoNo086
65L:L:?1 R:R:L290 15.90233.32YesYes104
66R:R:I209 R:R:I210 11.69411.47NoNo055
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
R:R:V298 R:R:Y50 5.05 1 No Yes 6 7 1 2
R:R:D122 R:R:F92 4.78 1 Yes Yes 6 6 1 2
R:R:F92 R:R:Q126 8.2 1 Yes Yes 6 7 2 1
R:R:F92 R:R:Y302 19.6 1 Yes Yes 6 7 2 1
R:R:L96 R:R:Y302 5.86 1 No Yes 7 7 2 1
R:R:A181 R:R:M119 3.22 0 No Yes 4 5 2 1
R:R:C193 R:R:M119 4.86 5 No Yes 9 5 2 1
L:L:?1 R:R:M119 3.39 1 Yes Yes 0 5 0 1
R:R:D122 R:R:Q126 3.92 1 Yes Yes 6 7 1 1
R:R:D122 R:R:Y302 8.05 1 Yes Yes 6 7 1 1
L:L:?1 R:R:D122 13.02 1 Yes Yes 0 6 0 1
R:R:F127 R:R:Q126 9.37 0 Yes Yes 6 7 2 1
R:R:Q126 R:R:W269 5.48 1 Yes Yes 7 8 1 2
L:L:?1 R:R:Q126 9.58 1 Yes Yes 0 7 0 1
R:R:W269 R:R:Y273 3.86 0 Yes Yes 8 7 2 2
R:R:F272 R:R:Y273 4.13 1 Yes Yes 6 7 1 2
R:R:F272 R:R:N276 15.71 1 Yes No 6 6 1 1
R:R:F272 R:R:F294 3.22 1 Yes Yes 6 4 1 1
L:L:?1 R:R:F272 12.66 1 Yes Yes 0 6 0 1
R:R:F275 R:R:L290 3.65 1 Yes Yes 4 4 1 1
R:R:F275 R:R:F294 5.36 1 Yes Yes 4 4 1 1
L:L:?1 R:R:F275 6.82 1 Yes Yes 0 4 0 1
L:L:?1 R:R:N276 8.78 1 Yes No 0 6 0 1
L:L:?1 R:R:S279 6 1 Yes No 0 4 0 1
R:R:L290 R:R:T287 7.37 1 Yes No 4 1 1 2
L:L:?1 R:R:L290 3.32 1 Yes Yes 0 4 0 1
R:R:F294 R:R:V298 6.55 1 Yes No 4 6 1 1
L:L:?1 R:R:F294 29.22 1 Yes Yes 0 4 0 1
L:L:?1 R:R:V298 4.76 1 Yes No 0 6 0 1
L:L:?1 R:R:Y302 6.56 1 Yes Yes 0 7 0 1
R:R:M119 R:R:V118 3.04 0 Yes No 5 5 1 2
R:R:F275 R:R:S278 2.64 1 Yes No 4 4 1 2
R:R:I284 R:R:L290 1.43 0 No Yes 1 4 2 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 7WIG_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3.07
Number of Linked Nodes 257
Number of Links 285
Number of Hubs 39
Number of Links mediated by Hubs 145
Number of Communities 9
Number of Nodes involved in Communities 63
Number of Links involved in Communities 84
Path Summary
Number Of Nodes in MetaPath 67
Number Of Links MetaPath 66
Number of Shortest Paths 58082
Length Of Smallest Path 3
Average Path Length 12.7934
Length of Longest Path 29
Minimum Path Strength 1.26
Average Path Strength 6.2947
Maximum Path Strength 19
Minimum Path Correlation 0.7
Average Path Correlation 0.921447
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 4.34783
Average % Of Corr. Nodes 48.018
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 52.7986
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain   • Ras-like P-loop GTPases   • G protein-coupled receptor-like
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain   • Ras-like P-loop GTPases   • G protein-coupled receptor-like
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
Code9FI
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
Code9FI
Name~{N}-[(2~{R})-1-[[(1~{R},3~{S})-3-(aminomethyl)cyclohexyl]methylamino]-3-(1~{H}-indol-3-yl)-1-oxidanylidene-propan-2-yl]spiro[indene-1,4'-piperidine]-1'-carboxamide
Synonyms
Identifier
FormulaC33 H41 N5 O2
Molecular Weight539.711
SMILES
PubChem9915239
Formal Charge0
Total Atoms81
Total Chiral Atoms3
Total Bonds86
Total Aromatic Bonds16

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP30874
Sequence
>7WIG_nogp_Chain_R
LTSNAVLTF IYFVVCIIG LCGNTLVIY VILRTITNI YILNLAIAD 
ELFMLGLPF LAMQVALVH WPFGKAICR VVMTVDGIN QFTSIFCLT 
VMSIDRYLA VVHPIKSAK WRRPRTAKM ITMAVWGVS LLVILPIMI 
YAGLRSNQW GRSSCTINW PGESGAWYT GFIIYTFIL GFLVPLTII 
CLCYLFIII KVKSSGIRV GSSKRKKSE KKVTRMVSI VVAVFIFCW 
LPFYIFNVS SVSMAISPT PALKGMFDF VVVLTYANS CANPILYAF 
LSDNFKKSF QNVL


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
7XATAPeptideSomatostatinSST2Homo sapiensSomatostatin-14-Gi1/β1/γ22.852022-08-31doi.org/10.1038/s41421-022-00405-2
7XAT (No Gprot) APeptideSomatostatinSST2Homo sapiensSomatostatin-14-2.852022-08-31doi.org/10.1038/s41421-022-00405-2
7XAUAPeptideSomatostatinSST2Homo sapiensOctreotide-Gi1/β1/γ22.972022-08-31doi.org/10.1038/s41421-022-00405-2
7XAU (No Gprot) APeptideSomatostatinSST2Homo sapiensOctreotide-2.972022-08-31doi.org/10.1038/s41421-022-00405-2
7XAVAPeptideSomatostatinSST2Homo sapiensLanreotide-Gi1/β1/γ22.872022-08-31doi.org/10.1038/s41421-022-00405-2
7XAV (No Gprot) APeptideSomatostatinSST2Homo sapiensLanreotide-2.872022-08-31doi.org/10.1038/s41421-022-00405-2
7WICAPeptideSomatostatinSST2Homo sapiensSomatostatin-14-Gi1/β1/γ22.82022-06-01doi.org/10.1038/s41422-022-00669-z
7WIC (No Gprot) APeptideSomatostatinSST2Homo sapiensSomatostatin-14-2.82022-06-01doi.org/10.1038/s41422-022-00669-z
7WIGAPeptideSomatostatinSST2Homo sapiensL-054,264-Gi1/β1/γ22.72022-06-01doi.org/10.1038/s41422-022-00669-z
7WIG (No Gprot) APeptideSomatostatinSST2Homo sapiensL-054,264-2.72022-06-01doi.org/10.1038/s41422-022-00669-z
7XMRAPeptideSomatostatinSST2Homo sapiensSomatostatin-14-Gi1/β1/γ23.12022-08-03doi.org/10.1038/s41422-022-00679-x
7XMR (No Gprot) APeptideSomatostatinSST2Homo sapiensSomatostatin-14-3.12022-08-03doi.org/10.1038/s41422-022-00679-x
7XN9APeptideSomatostatinSST2Homo sapiensL-054,522--2.62022-08-03doi.org/10.1038/s41422-022-00679-x
7XNAAPeptideSomatostatinSST2Homo sapiensCYN154806--2.652022-08-03doi.org/10.1038/s41422-022-00679-x
7YACAPeptideSomatostatinSST2Homo sapiensPaltusotine-Gi1/β1/γ23.242023-04-19doi.org/10.1038/s41467-023-36673-z
7YAC (No Gprot) APeptideSomatostatinSST2Homo sapiensPaltusotine-3.242023-04-19doi.org/10.1038/s41467-023-36673-z
7YAEAPeptideSomatostatinSST2Homo sapiensOctreotide-Gi1/β1/γ23.372023-04-19doi.org/10.1038/s41467-023-36673-z
7YAE (No Gprot) APeptideSomatostatinSST2Homo sapiensOctreotide-3.372023-04-19doi.org/10.1038/s41467-023-36673-z
7Y24APeptideSomatostatinSST2Homo sapiensOctreotide-Go/β1/γ23.252022-10-19doi.org/10.1038/s41589-022-01130-3
7Y24 (No Gprot) APeptideSomatostatinSST2Homo sapiensOctreotide-3.252022-10-19doi.org/10.1038/s41589-022-01130-3
7Y26APeptideSomatostatinSST2Homo sapiensOctreotide-chim(NtGi2L-Gs-CtGq)/β1/γ23.32022-10-19doi.org/10.1038/s41589-022-01130-3
7Y26 (No Gprot) APeptideSomatostatinSST2Homo sapiensOctreotide-3.32022-10-19doi.org/10.1038/s41589-022-01130-3
7Y27APeptideSomatostatinSST2Homo sapiensSomatostatin-14-chim(NtGi2L-Gs-CtGq)/β1/γ23.482022-10-19doi.org/10.1038/s41589-022-01130-3
7Y27 (No Gprot) APeptideSomatostatinSST2Homo sapiensSomatostatin-14-3.482022-10-19doi.org/10.1038/s41589-022-01130-3
7UL5APeptideSomatostatinSST2Homo sapiens---3.12022-06-29doi.org/10.1038/s41594-022-00859-8
7WJ5APeptideSomatostatinSST2Homo sapiensSomatostatin-14-Gi1/β1/γ23.722022-07-13doi.org/10.7554/eLife.76823
7WJ5 (No Gprot) APeptideSomatostatinSST2Homo sapiensSomatostatin-14-3.722022-07-13doi.org/10.7554/eLife.76823
7T10APeptideSomatostatinSST2Homo sapiensSomatostatin-14-Gi3/β1/γ22.52022-03-09doi.org/10.1038/s41594-022-00727-5
7T10 (No Gprot) APeptideSomatostatinSST2Homo sapiensSomatostatin-14-2.52022-03-09doi.org/10.1038/s41594-022-00727-5
7T11APeptideSomatostatinSST2Homo sapiensOctreotide-Gi3/β1/γ22.72022-03-09doi.org/10.1038/s41594-022-00727-5
7T11 (No Gprot) APeptideSomatostatinSST2Homo sapiensOctreotide-2.72022-03-09doi.org/10.1038/s41594-022-00727-5




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Download 7WIG_nogp.zip



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