Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:F3 9.2675410
2L:L:?4 5.848510
3R:R:Y50 4.6275407
4R:R:I68 3.508527
5R:R:M74 4.635427
6R:R:L83 4.97426
7R:R:L96 5.915407
8R:R:W108 8.21667658
9R:R:F110 9.53456
10R:R:I114 3.8575456
11R:R:I124 2.788505
12R:R:Y141 8.2275408
13R:R:W167 5.044509
14R:R:V173 2.43464
15R:R:I195 4.3775405
16R:R:W197 6.68405
17R:R:Y205 10.93414
18R:R:I209 3.855415
19R:R:F217 4.775418
20R:R:W269 5.534508
21R:R:F272 4.954516
22R:R:F275 3.2575404
23R:R:F294 5.478514
24R:R:Y312 5.664509
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:?1 L:L:C2 82.22026.72NoNo000
2L:L:C2 R:R:F294 83.4329.78NoYes104
3L:L:?4 R:R:F294 88.47362.9YesYes104
4L:L:F3 R:R:Y205 17.437623.73YesYes104
5L:L:F3 R:R:I195 24.73643.77YesYes005
6L:L:?4 L:L:K5 88.806712.31YesNo000
7L:L:?4 R:R:F272 41.18413.87YesYes106
8R:R:F294 R:R:N276 27.37284.83YesNo146
9R:R:F272 R:R:N276 27.55784.83YesNo166
10L:L:K5 R:R:Q126 89.25994.07NoNo007
11L:L:?1 L:L:T8 85.51345NoNo000
12L:L:T8 R:R:N186 83.00654.39NoNo001
13R:R:F127 R:R:Q126 1003.51NoNo067
14R:R:F127 R:R:F131 96.02223.22NoNo066
15R:R:F131 R:R:V166 95.33772.62NoNo066
16R:R:V166 R:R:W167 93.9133.68NoYes069
17R:R:I124 R:R:W167 88.34412.35YesYes059
18R:R:I124 R:R:N125 81.86864.25YesNo057
19R:R:F92 R:R:N125 76.68836.04NoNo067
20R:R:F92 R:R:Y302 75.596713.41NoNo067
21R:R:L96 R:R:Y302 74.48667.03YesNo077
22R:R:L96 R:R:Y50 18.65865.86YesYes077
23R:R:L96 R:R:M93 57.89082.83YesNo076
24R:R:M93 R:R:S305 51.61894.6NoNo068
25R:R:D89 R:R:S305 50.14810.31NoNo098
26R:R:D89 R:R:N61 45.143412.12NoNo499
27R:R:E90 R:R:N61 44.07967.89NoNo079
28R:R:E90 R:R:I65 40.90665.47NoNo077
29R:R:I65 R:R:L83 37.46532.85NoYes276
30R:R:I68 R:R:L83 14.62534.28YesYes276
31R:R:L83 R:R:M74 21.56349.9YesYes267
32R:R:I80 R:R:M74 11.27662.92NoYes057
33R:R:N79 R:R:T76 15.05097.31NoNo087
34R:R:Q126 R:R:W269 81.62815.48NoYes078
35R:R:F265 R:R:W269 99.056410.02NoYes098
36R:R:F265 R:R:N304 96.66052.42NoNo099
37R:R:N304 R:R:N308 83.82984.09NoNo099
38R:R:N308 R:R:Y312 78.834411.63NoYes099
39R:R:M136 R:R:Y312 25.41174.79NoYes099
40R:R:F272 R:R:T301 63.55233.89YesNo067
41R:R:T301 R:R:W269 63.84833.64NoYes078
42R:R:M136 R:R:Y81 22.74752.39NoNo097
43R:R:D139 R:R:Y81 11.45248.05NoNo087
44R:R:N186 R:R:S192 80.4817.45NoNo014
45R:R:Q102 R:R:S192 77.93712.89NoNo054
46R:R:Q102 R:R:W108 75.77249.86NoYes058
47R:R:F110 R:R:W108 14.514319.04YesYes568
48R:R:I114 R:R:W108 32.04447.05YesYes568
49R:R:P109 R:R:W108 11.93342.7NoYes048
50R:R:C115 R:R:W108 14.71797.84NoYes098
51R:R:C115 R:R:C193 12.12777.28NoNo099
52R:R:I114 R:R:V117 24.04261.54YesNo065
53R:R:R116 R:R:V117 21.10082.62NoNo065
54R:R:M178 R:R:R116 15.16197.44NoNo056
55R:R:F127 R:R:V173 11.29512.62NoYes064
56R:R:I130 R:R:W269 49.07493.52NoYes088
57R:R:I130 R:R:P220 46.44773.39NoNo089
58R:R:L133 R:R:Y312 48.83445.86NoYes099
59R:R:I224 R:R:L133 46.21652.85NoNo079
60R:R:I224 R:R:S137 43.6541.55NoNo079
61R:R:S137 R:R:Y228 40.83262.54NoNo099
62R:R:P220 R:R:T134 40.86031.75NoNo097
63R:R:I223 R:R:T134 38.03891.52NoNo067
64R:R:I138 R:R:I223 32.33125.89NoNo066
65R:R:C227 R:R:I138 29.45421.64NoNo076
66R:R:C227 R:R:Y141 26.5688.06NoYes078
67R:R:V145 R:R:Y141 14.791915.14NoYes078
68R:R:I195 R:R:N196 18.88072.83YesNo053
69R:R:N196 R:R:Y180 14.42189.3NoNo034
70R:R:W197 R:R:Y180 12.02599.65YesNo054
71R:R:V280 R:R:Y205 12.340413.88NoYes044
72R:R:V258 R:R:Y228 32.303410.09NoNo089
73R:R:V258 R:R:V262 26.87331.6NoNo087
74R:R:C225 R:R:V262 23.953.42NoNo057
75R:R:C225 R:R:L221 21.02681.59NoNo056
76R:R:I266 R:R:L221 18.07595.71NoNo066
77R:R:C268 R:R:N304 11.55413.15NoNo089
78R:R:F275 R:R:F294 29.5934.29YesYes044
79R:R:F275 R:R:L290 12.14622.44YesNo044
80L:L:?4 L:L:F3 42.31275.8YesYes100
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:C2 R:R:F294 9.78 1 No Yes 0 4 0 1
L:L:F3 R:R:I195 3.77 1 Yes Yes 0 5 0 1
L:L:F3 R:R:Y205 23.73 1 Yes Yes 0 4 0 1
L:L:F3 R:R:I209 3.77 1 Yes Yes 0 5 0 1
L:L:?4 R:R:F272 3.87 1 Yes Yes 0 6 0 1
L:L:?4 R:R:N276 4.36 1 Yes No 0 6 0 1
L:L:?4 R:R:F294 2.9 1 Yes Yes 0 4 0 1
L:L:K5 R:R:Q126 4.07 0 No No 0 7 0 1
L:L:C7 R:R:K291 4.85 1 No No 0 3 0 1
L:L:C7 R:R:F294 5.59 1 No Yes 0 4 0 1
L:L:T8 R:R:N186 4.39 0 No No 0 1 0 1
R:R:F127 R:R:Q126 3.51 0 No No 6 7 2 1
R:R:Q126 R:R:W269 5.48 0 No Yes 7 8 1 2
R:R:I177 R:R:I195 5.89 0 No Yes 3 5 2 1
R:R:N186 R:R:S192 7.45 0 No No 1 4 1 2
R:R:T194 R:R:W197 4.85 0 No Yes 4 5 1 2
R:R:I195 R:R:N196 2.83 0 Yes No 5 3 1 2
R:R:F208 R:R:I195 5.02 1 No Yes 7 5 2 1
R:R:I209 R:R:Y205 4.84 1 Yes Yes 5 4 1 1
R:R:V280 R:R:Y205 13.88 0 No Yes 4 4 2 1
R:R:F208 R:R:I209 3.77 1 No Yes 7 5 2 1
R:R:F208 R:R:T212 3.89 1 No No 7 4 2 2
R:R:I209 R:R:T212 3.04 1 Yes No 5 4 1 2
R:R:T301 R:R:W269 3.64 0 No Yes 7 8 2 2
R:R:F272 R:R:Y273 8.25 1 Yes No 6 7 1 2
R:R:F272 R:R:N276 4.83 1 Yes No 6 6 1 1
R:R:F272 R:R:V297 3.93 1 Yes No 6 7 1 2
R:R:F272 R:R:T301 3.89 1 Yes No 6 7 1 2
R:R:F275 R:R:F294 4.29 0 Yes Yes 4 4 2 1
R:R:F294 R:R:N276 4.83 1 Yes No 4 6 1 1
R:R:G292 R:R:K291 1.74 0 No No 1 3 2 1
L:L:T6 R:R:T194 1.57 0 No No 0 4 0 1
L:L:?1 R:R:S279 1.27 0 No No 0 4 0 1
R:R:S279 R:R:Y205 1.27 0 No Yes 4 4 1 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 7Y26_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 2.35
Number of Linked Nodes 241
Number of Links 252
Number of Hubs 24
Number of Links mediated by Hubs 89
Number of Communities 6
Number of Nodes involved in Communities 32
Number of Links involved in Communities 39
Path Summary
Number Of Nodes in MetaPath 81
Number Of Links MetaPath 80
Number of Shortest Paths 29269
Length Of Smallest Path 3
Average Path Length 16.7216
Length of Longest Path 41
Minimum Path Strength 1.34
Average Path Strength 5.36759
Maximum Path Strength 18.805
Minimum Path Correlation 0.7
Average Path Correlation 0.927545
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 3.22581
Average % Of Corr. Nodes 39.3205
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 28.3277
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier• G protein-coupled receptor-like   • Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• G protein-coupled receptor-like   • Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeDPN
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodeDPN
NameD-Phenylalanine
SynonymsD-Phenylalanine
Identifier
FormulaC9 H11 N O2
Molecular Weight165.189
SMILES
PubChem6919011
Formal Charge0
Total Atoms23
Total Chiral Atoms1
Total Bonds23
Total Aromatic Bonds6

CodeDTR
PDB ResiduesL:L:?4
Environment DetailsOpen EMBL-EBI Page
CodeDTR
NameD-Tryptophan
Synonyms
  • (2R)-2-amino-3-(1H-indol-3-yl)propanoic acid
  • DTR
  • D-Tryptophan
  • (R)-tryptophan
Identifier
FormulaC11 H12 N2 O2
Molecular Weight204.225
SMILES
PubChem6923517
Formal Charge0
Total Atoms27
Total Chiral Atoms1
Total Bonds28
Total Aromatic Bonds10

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP30874
Sequence
>7Y26_nogp_Chain_R
TSNAVLTFI YFVVCIIGL CGNTLVIYV ILRYAKMKT ITNIYILNL 
AIADELFML GLPFLAMQV ALVHWPFGK AICRVVMTV DGINQFTSI 
FCLTVMSID RYLAVVHPI KSAKWRRPR TAKMITMAV WGVSLLVIL 
PIMIYAGLR SNQWGRSSC TINWGAWYT GFIIYTFIL GFLVPLTII 
CLCYLFIII KVKSSKKSE KKVTRMVSI VVAVFIFCW LPFYIFNVS 
SVSMPTPAL KGMFDFVVV LTYANSCAN PILYAFLSD NFKKSFQNV


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
7YAEAPeptideSomatostatinSST2Homo sapiensOctreotide-Gi1/β1/γ23.372023-04-1910.1038/s41467-023-36673-z
7YAE (No Gprot) APeptideSomatostatinSST2Homo sapiensOctreotide-3.372023-04-1910.1038/s41467-023-36673-z
7YACAPeptideSomatostatinSST2Homo sapiensPaltusotine-Gi1/β1/γ23.242023-04-1910.1038/s41467-023-36673-z
7YAC (No Gprot) APeptideSomatostatinSST2Homo sapiensPaltusotine-3.242023-04-1910.1038/s41467-023-36673-z
7Y27APeptideSomatostatinSST2Homo sapiensSomatostatin-14-chim(NtGi2L-Gs-CtGq)/β1/γ23.482022-10-1910.1038/s41589-022-01130-3
7Y27 (No Gprot) APeptideSomatostatinSST2Homo sapiensSomatostatin-14-3.482022-10-1910.1038/s41589-022-01130-3
7Y26APeptideSomatostatinSST2Homo sapiensOctreotide-chim(NtGi2L-Gs-CtGq)/β1/γ23.32022-10-1910.1038/s41589-022-01130-3
7Y26 (No Gprot) APeptideSomatostatinSST2Homo sapiensOctreotide-3.32022-10-1910.1038/s41589-022-01130-3
7Y24APeptideSomatostatinSST2Homo sapiensOctreotide-Go/β1/γ23.252022-10-1910.1038/s41589-022-01130-3
7Y24 (No Gprot) APeptideSomatostatinSST2Homo sapiensOctreotide-3.252022-10-1910.1038/s41589-022-01130-3
7T11APeptideSomatostatinSST2Homo sapiensOctreotide-Gi3/β1/γ22.72022-03-09doi.org/10.1038/s41594-022-00727-5
7T11 (No Gprot) APeptideSomatostatinSST2Homo sapiensOctreotide-2.72022-03-09doi.org/10.1038/s41594-022-00727-5
7T10APeptideSomatostatinSST2Homo sapiensSomatostatin-14-Gi3/β1/γ22.52022-03-09doi.org/10.1038/s41594-022-00727-5
7T10 (No Gprot) APeptideSomatostatinSST2Homo sapiensSomatostatin-14-2.52022-03-09doi.org/10.1038/s41594-022-00727-5
7XAVAPeptideSomatostatinSST2Homo sapiensLanreotide-Gi1/β1/γ22.872022-08-3110.1038/s41421-022-00405-2
7XAV (No Gprot) APeptideSomatostatinSST2Homo sapiensLanreotide-2.872022-08-3110.1038/s41421-022-00405-2
7XAUAPeptideSomatostatinSST2Homo sapiensOctreotide-Gi1/β1/γ22.972022-08-3110.1038/s41421-022-00405-2
7XAU (No Gprot) APeptideSomatostatinSST2Homo sapiensOctreotide-2.972022-08-3110.1038/s41421-022-00405-2
7XATAPeptideSomatostatinSST2Homo sapiensSomatostatin-14-Gi1/β1/γ22.852022-08-3110.1038/s41421-022-00405-2
7XAT (No Gprot) APeptideSomatostatinSST2Homo sapiensSomatostatin-14-2.852022-08-3110.1038/s41421-022-00405-2
7XNAAPeptideSomatostatinSST2Homo sapiensCYN154806--2.652022-08-0310.1038/s41422-022-00679-x
7XN9APeptideSomatostatinSST2Homo sapiensL-054,522--2.62022-08-0310.1038/s41422-022-00679-x
7XMRAPeptideSomatostatinSST2Homo sapiensSomatostatin-14-Gi1/β1/γ23.12022-08-0310.1038/s41422-022-00679-x
7XMR (No Gprot) APeptideSomatostatinSST2Homo sapiensSomatostatin-14-3.12022-08-0310.1038/s41422-022-00679-x
7WJ5APeptideSomatostatinSST2Homo sapiensSomatostatin-14-Gi1/β1/γ23.722022-07-1310.7554/eLife.76823
7WJ5 (No Gprot) APeptideSomatostatinSST2Homo sapiensSomatostatin-14-3.722022-07-1310.7554/eLife.76823
7UL5APeptideSomatostatinSST2Homo sapiens---3.12022-06-2910.1038/s41594-022-00859-8
7WIGAPeptideSomatostatinSST2Homo sapiensL-054,264-Gi1/β1/γ22.72022-06-0110.1038/s41422-022-00669-z
7WIG (No Gprot) APeptideSomatostatinSST2Homo sapiensL-054,264-2.72022-06-0110.1038/s41422-022-00669-z
7WICAPeptideSomatostatinSST2Homo sapiensSomatostatin-14-Gi1/β1/γ22.82022-06-0110.1038/s41422-022-00669-z
7WIC (No Gprot) APeptideSomatostatinSST2Homo sapiensSomatostatin-14-2.82022-06-0110.1038/s41422-022-00669-z




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Download 7Y26_nogp.zip



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