Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:?1 9.121671210
2R:R:L67 5.098528
3R:R:N72 7.6075429
4R:R:L78 6.386519
5R:R:D82 6.652519
6R:R:V98 2.25406
7R:R:W102 7.05571739
8R:R:T121 4.6725408
9R:R:H126 7.93857718
10R:R:L127 5.424518
11R:R:Y135 7.664509
12R:R:R148 8.186508
13R:R:W161 8.996519
14R:R:Y195 9.33508
15R:R:T200 5.105417
16R:R:F204 9.35167618
17R:R:Y205 5.5325417
18R:R:L208 6.4417
19R:R:M211 5.436519
20R:R:Y215 5.55719
21R:R:F219 3.842546
22R:R:E340 4.97448
23R:R:T343 2.83448
24R:R:F354 5.93619
25R:R:W358 7.44818
26R:R:L359 4.84407
27R:R:F361 11.6625418
28R:R:F362 10.524517
29R:R:I385 3.84406
30R:R:W387 8.8875408
31R:R:Y390 10.016518
32R:R:N396 9.2075419
33R:R:Y400 5619
34R:R:Y402 5.9725406
35R:R:D406 6.2125427
36R:R:F407 6.93728
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:?1 R:R:Y390 37.92513.31YesYes108
2R:R:W387 R:R:Y390 27.86316.4YesYes088
3R:R:L43 R:R:W387 20.763511.39NoYes078
4R:R:L43 R:R:T39 17.20072.95NoNo075
5R:R:T39 R:R:V98 13.46821.59NoYes056
6L:L:?1 R:R:W358 1003.8YesYes108
7R:R:N392 R:R:W358 51.47814.69NoYes098
8R:R:N392 R:R:N396 50.362210.9NoYes099
9R:R:D82 R:R:N396 71.75868.08YesYes199
10R:R:D82 R:R:N54 99.12566.73YesNo099
11R:R:N54 R:R:P397 78.55796.52NoNo099
12R:R:P397 R:R:Y402 75.92824.17NoYes096
13R:R:G53 R:R:Y402 11.84344.35NoYes096
14R:R:D82 R:R:S393 26.36224.42YesNo099
15R:R:S393 R:R:S86 14.77323.26NoNo098
16R:R:A50 R:R:S86 11.84343.42NoNo088
17R:R:L83 R:R:N54 20.59384.12NoNo089
18R:R:V57 R:R:Y402 17.12895.05NoYes096
19R:R:A79 R:R:V57 11.84343.39NoNo099
20R:R:F411 R:R:Y402 45.579110.32NoYes086
21R:R:F407 R:R:F411 40.01964.29YesNo088
22R:R:F407 R:R:L67 23.32798.53YesYes288
23R:R:A410 R:R:L67 17.72923.15NoYes088
24R:R:A410 R:R:E64 14.80594.53NoNo087
25R:R:F354 R:R:W358 55.91526.01YesYes198
26R:R:F354 R:R:M211 56.06538.71YesYes199
27R:R:M211 R:R:Y215 92.83523.59YesYes199
28R:R:I218 R:R:Y215 81.1553.63NoYes099
29R:R:I218 R:R:Y135 79.12563.63NoYes099
30R:R:W136 R:R:Y135 60.09143.86NoYes059
31R:R:R152 R:R:W136 56.09145NoNo075
32R:R:R148 R:R:R152 38.30993.2YesNo087
33R:R:R148 R:R:V70 19.569313.08YesNo087
34R:R:P150 R:R:V70 14.75371.77NoNo057
35R:R:F354 R:R:L127 42.80593.65YesYes198
36R:R:L127 R:R:L78 45.08324.15YesYes189
37R:R:H126 R:R:L78 26.97555.14YesYes189
38R:R:L127 R:R:Y400 10.76028.21YesYes189
39R:R:H126 R:R:W161 10.78635.29YesYes189
40R:R:L83 R:R:V87 14.77322.98NoNo086
41L:L:?1 R:R:I189 49.0446.67YesNo006
42R:R:I113 R:R:I189 17.74234.42NoNo076
43R:R:C187 R:R:I113 16.14363.27NoNo097
44R:R:C187 R:R:W102 12.60039.14NoYes399
45R:R:I189 R:R:Y195 32.54166.04NoYes068
46R:R:S190 R:R:Y195 20.70476.36NoYes068
47R:R:R176 R:R:S190 17.28553.95NoNo066
48R:R:R176 R:R:R181 13.853224.52NoNo064
49L:L:?1 R:R:S199 32.95277.02YesNo008
50R:R:S199 R:R:Y195 31.432315.26NoYes088
51L:L:?1 R:R:T121 163.94YesYes008
52R:R:I167 R:R:T121 10.53836.08NoYes088
53R:R:C128 R:R:M211 11.30834.86NoYes079
54R:R:R134 R:R:Y400 25.44866.17NoYes199
55R:R:R134 R:R:Y215 25.79458.23NoYes199
56R:R:D143 R:R:R152 17.161510.72NoNo067
57R:R:P171 R:R:Y195 20.704716.69NoYes078
58R:R:P170 R:R:P171 17.28555.84NoNo087
59R:R:D192 R:R:Y195 20.70472.3NoYes068
60R:R:D192 R:R:T177 13.85322.89NoNo065
61L:L:?1 R:R:T200 10.67543.94YesYes107
62R:R:F201 R:R:Y205 30.17945.16NoYes057
63R:R:F201 R:R:I197 27.92823.77NoNo057
64R:R:F370 R:R:I197 25.66395.02NoNo057
65R:R:F370 R:R:T196 18.79283.89NoNo057
66R:R:P369 R:R:T196 16.476312.24NoNo077
67R:R:K191 R:R:P369 14.14683.35NoNo057
68R:R:K191 R:R:T188 11.80421.5NoNo055
69R:R:F204 R:R:W358 22.59055.01YesYes188
70L:L:?1 R:R:F362 11.902110.57YesYes107
71R:R:F204 R:R:F362 14.499219.29YesYes187
72R:R:F204 R:R:L359 44.07186.09YesYes087
73R:R:L347 R:R:Y215 33.2794.69NoYes089
74R:R:F219 R:R:L347 30.96254.87YesNo068
75R:R:F219 R:R:T343 14.41443.89YesYes468
76R:R:I399 R:R:Y400 12.46334.84NoYes089
77R:R:I363 R:R:L359 17.57267.14NoYes077
78R:R:L359 R:R:P360 23.32793.28YesNo079
79R:R:I385 R:R:P360 20.45683.39YesNo069
80R:R:I385 R:R:L381 11.76517.14YesNo066
81R:R:I363 R:R:V367 14.67541.54NoNo076
82R:R:C371 R:R:V367 11.76511.71NoNo056
83R:R:F204 R:R:Y205 26.17296.19YesYes187
84R:R:F204 R:R:F354 39.90218.57YesYes189
85R:R:D82 R:R:L78 54.27738.14YesYes199
86R:R:L127 R:R:M211 45.83364.24YesYes189
87R:R:L127 R:R:N396 32.83526.87YesYes189
88R:R:L78 R:R:Y400 25.23333.52YesYes199
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:?1 R:R:D116 12.69 1 Yes No 0 8 0 1
L:L:?1 R:R:V117 9.95 1 Yes No 0 8 0 1
L:L:?1 R:R:C120 8.48 1 Yes No 0 7 0 1
L:L:?1 R:R:T121 3.94 1 Yes Yes 0 8 0 1
L:L:?1 R:R:I189 6.67 1 Yes No 0 6 0 1
L:L:?1 R:R:S199 7.02 1 Yes No 0 8 0 1
L:L:?1 R:R:T200 3.94 1 Yes Yes 0 7 0 1
L:L:?1 R:R:W358 3.8 1 Yes Yes 0 8 0 1
L:L:?1 R:R:F361 23.59 1 Yes Yes 0 8 0 1
L:L:?1 R:R:F362 10.57 1 Yes Yes 0 7 0 1
L:L:?1 R:R:N386 5.5 1 Yes No 0 7 0 1
L:L:?1 R:R:Y390 13.31 1 Yes Yes 0 8 0 1
R:R:L90 R:R:Y390 4.69 0 No Yes 8 8 2 1
R:R:A93 R:R:Y390 5.34 0 No Yes 7 8 2 1
R:R:I113 R:R:I189 4.42 0 No No 7 6 2 1
R:R:D116 R:R:Y390 10.34 1 No Yes 8 8 1 1
R:R:S168 R:R:V117 6.46 0 No No 8 8 2 1
R:R:C120 R:R:W358 5.22 1 No Yes 7 8 1 1
R:R:G164 R:R:T121 3.64 0 No Yes 8 8 2 1
R:R:I167 R:R:T121 6.08 0 No Yes 8 8 2 1
R:R:A203 R:R:T121 5.03 0 No Yes 8 8 2 1
R:R:F354 R:R:I124 3.77 1 Yes No 9 8 2 2
R:R:I124 R:R:W358 11.74 1 No Yes 8 8 2 1
R:R:I189 R:R:Y195 6.04 0 No Yes 6 8 1 2
R:R:S199 R:R:Y195 15.26 0 No Yes 8 8 1 2
R:R:T200 R:R:Y205 3.75 1 Yes Yes 7 7 1 2
R:R:F362 R:R:T200 3.89 1 Yes Yes 7 7 1 1
R:R:L366 R:R:T200 8.84 1 No Yes 7 7 2 1
R:R:F204 R:R:Y205 6.19 1 Yes Yes 8 7 2 2
R:R:F204 R:R:F354 8.57 1 Yes Yes 8 9 2 2
R:R:F204 R:R:W358 5.01 1 Yes Yes 8 8 2 1
R:R:F204 R:R:F362 19.29 1 Yes Yes 8 7 2 1
R:R:L366 R:R:Y205 7.03 1 No Yes 7 7 2 2
R:R:F354 R:R:W358 6.01 1 Yes Yes 9 8 2 1
R:R:F362 R:R:W358 6.01 1 Yes Yes 7 8 1 1
R:R:G389 R:R:W358 7.04 0 No Yes 8 8 2 1
R:R:N392 R:R:W358 14.69 0 No Yes 9 8 2 1
R:R:F361 R:R:F362 12.86 1 Yes Yes 8 7 1 1
R:R:A365 R:R:F361 4.16 0 No Yes 8 8 2 1
R:R:F361 R:R:N386 6.04 1 Yes No 8 7 1 1
R:R:W387 R:R:Y390 16.4 0 Yes Yes 8 8 2 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 8FYE_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3.42
Number of Linked Nodes 273
Number of Links 303
Number of Hubs 36
Number of Links mediated by Hubs 145
Number of Communities 5
Number of Nodes involved in Communities 48
Number of Links involved in Communities 75
Path Summary
Number Of Nodes in MetaPath 89
Number Of Links MetaPath 88
Number of Shortest Paths 48257
Length Of Smallest Path 3
Average Path Length 11.7237
Length of Longest Path 27
Minimum Path Strength 1.41
Average Path Strength 6.16758
Maximum Path Strength 18.45
Minimum Path Correlation 0.7
Average Path Correlation 0.939318
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 6.25
Average % Of Corr. Nodes 61.4297
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 48.9416
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function• D2 dopamine receptor binding   • protein binding   • binding   • signaling receptor binding   • G protein-coupled receptor binding   • dopamine receptor binding   • phosphorus-oxygen lyase activity   • enzyme regulator activity   • cyclase regulator activity   • molecular function regulator activity   • cyclase activity   • adenylate cyclase regulator activity   • lyase activity   • catalytic activity   • adenylate cyclase activity   • guanyl nucleotide binding   • GTP binding   • nucleotide binding   • guanyl ribonucleotide binding   • purine ribonucleotide binding   • purine ribonucleoside triphosphate binding   • nucleoside phosphate binding   • ion binding   • purine nucleotide binding   • anion binding   • heterocyclic compound binding   • carbohydrate derivative binding   • ribonucleotide binding   • small molecule binding   • cation binding   • magnesium ion binding   • metal ion binding   • GDP binding   • G protein-coupled serotonin receptor binding   • protein-containing complex binding   • G-protein beta/gamma-subunit complex binding   • pyrophosphatase activity   • GTPase activity   • G protein activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • cell communication   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction
Gene OntologyBiological Process• cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • cell communication   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction   • response to hormone   • response to chemical   • response to endogenous stimulus   • response to peptide hormone   • response to oxygen-containing compound   • response to nitrogen compound   • cell division   • leukocyte migration   • immune system process   • mononuclear cell migration   • lymphocyte migration   • cell migration   • T cell migration   • cell motility   • regulation of steroid biosynthetic process   • regulation of cholesterol biosynthetic process   • regulation of cholesterol metabolic process   • steroid metabolic process   • regulation of lipid metabolic process   • sterol metabolic process   • positive regulation of biological process   • cholesterol metabolic process   • lipid biosynthetic process   • alcohol metabolic process   • regulation of primary metabolic process   • positive regulation of metabolic process   • regulation of small molecule metabolic process   • positive regulation of biosynthetic process   • positive regulation of lipid metabolic process   • small molecule metabolic process   • steroid biosynthetic process   • positive regulation of cellular process   • regulation of biosynthetic process   • secondary alcohol biosynthetic process   • regulation of alcohol biosynthetic process   • small molecule biosynthetic process   • regulation of steroid metabolic process   • cholesterol biosynthetic process   • positive regulation of cholesterol biosynthetic process   • primary metabolic process   • secondary alcohol metabolic process   • positive regulation of steroid biosynthetic process   • biosynthetic process   • sterol biosynthetic process   • positive regulation of lipid biosynthetic process   • regulation of sterol biosynthetic process   • alcohol biosynthetic process   • positive regulation of cholesterol metabolic process   • positive regulation of steroid metabolic process   • metabolic process   • regulation of lipid biosynthetic process   • positive regulation of small molecule metabolic process   • regulation of metabolic process   • positive regulation of alcohol biosynthetic process   • positive regulation of sterol biosynthetic process   • lipid metabolic process   • regulation of cytoskeleton organization   • regulation of cellular component organization   • microtubule cytoskeleton organization   • regulation of mitotic spindle organization   • mitotic cell cycle   • cellular component organization   • cell cycle   • cellular component organization or biogenesis   • regulation of cell cycle   • microtubule cytoskeleton organization involved in mitosis   • spindle organization   • cell cycle process   • regulation of cell cycle process   • regulation of microtubule-based process   • regulation of spindle organization   • regulation of organelle organization   • mitotic spindle organization   • organelle organization   • mitotic cell cycle process   • microtubule-based process   • cytoskeleton organization   • regulation of microtubule cytoskeleton organization   • protein localization   • positive regulation of protein localization to cell periphery   • regulation of localization   • protein localization to cell periphery   • cellular localization   • regulation of protein localization   • positive regulation of protein localization to cell cortex   • regulation of protein localization to cell periphery   • localization   • regulation of cellular localization   • regulation of protein localization to cell cortex   • cellular macromolecule localization   • macromolecule localization   • positive regulation of protein localization   • protein localization to cell cortex   • response to ketone   • response to prostaglandin   • response to lipid   • response to alcohol   • response to prostaglandin E   • cellular response to forskolin   • cellular response to oxygen-containing compound   • cellular response to chemical stimulus   • cellular response to alcohol   • response to forskolin   • cellular response to lipid   • cellular response to ketone   • midbody   • cellular anatomical structure   • membrane-bounded organelle   • intracellular anatomical structure   • nucleus   • membrane-enclosed lumen   • intracellular membraneless organelle   • intracellular membrane-bounded organelle   • nucleolus   • intracellular organelle lumen   • intracellular organelle   • organelle lumen   • organelle   • membraneless organelle
Gene OntologyCellular Component• midbody   • cellular anatomical structure   • membrane-bounded organelle   • intracellular anatomical structure   • nucleus   • membrane-enclosed lumen   • intracellular membraneless organelle   • intracellular membrane-bounded organelle   • nucleolus   • intracellular organelle lumen   • intracellular organelle   • organelle lumen   • organelle   • membraneless organelle   • nuclear lumen   • cell periphery   • cell cortex   • cytoplasm   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • membrane   • plasma membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cytoplasmic side of plasma membrane   • GTPase complex   • extrinsic component of membrane   • extrinsic component of cytoplasmic side of plasma membrane   • extracellular exosome   • extracellular vesicle   • extracellular organelle   • extracellular region   • extracellular space   • vesicle   • extracellular membrane-bounded organelle   • centrosome   • microtubule organizing center   • cytoskeleton   • microtubule cytoskeleton   • centriolar satellite   • cytosol   • nucleoplasm   • vacuolar membrane   • lytic vacuole   • vacuole   • lytic vacuole membrane   • bounding membrane of organelle   • lysosomal membrane   • organelle membrane   • lysosome   • Golgi apparatus   • endomembrane system   • cilium   • plasma membrane bounded cell projection   • ciliary basal body   • cell projection   • protein binding   • binding   • enzyme binding   • GTPase binding   • protein-containing complex binding   • pyrophosphatase activity   • GTPase activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • signaling receptor complex adaptor activity   • protein-macromolecule adaptor activity   • molecular adaptor activity   • signaling adaptor activity   • multicellular organismal process   • system process   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of taste   • developmental process   • sensory organ development   • eye development   • animal organ development   • retina development in camera-type eye   • visual system development   • multicellular organism development   • camera-type eye development   • anatomical structure development   • sensory system development   • system development   • cell population proliferation   • cellular process   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • signal transduction   • cell communication   • response to ketone   • response to prostaglandin   • response to lipid   • response to endogenous stimulus   • response to alcohol   • cellular response to prostaglandin stimulus   • response to oxygen-containing compound   • cellular response to oxygen-containing compound   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to chemical stimulus   • cellular response to alcohol   • response to hormone   • response to chemical   • cellular response to lipid   • response to prostaglandin E   • cellular response to ketone   • cellular response to hormone stimulus   • small GTPase-mediated signal transduction   • Ras protein signal transduction   • intracellular signal transduction   • intracellular signaling cassette   • phospholipase C-activating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular response to nitrogen compound   • response to dopamine   • cellular response to dopamine   • response to monoamine   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • G protein-coupled dopamine receptor signaling pathway   • response to nitrogen compound   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cellular response to monoamine stimulus   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • synaptic signaling   • cellular response to acetylcholine   • cell-cell signaling   • acetylcholine receptor signaling pathway   • postsynaptic signal transduction   • G protein-coupled acetylcholine receptor signaling pathway   • response to acetylcholine   • non-motile cilium   • 9+0 non-motile cilium   • neuron projection   • photoreceptor disc membrane   • photoreceptor outer segment   • photoreceptor cell cilium   • synapse   • cell junction   • G-protein beta-subunit binding   • fibroblast proliferation   • tetrapyrrole binding   • heme binding   • electron transfer activity   • cation binding   • transition metal ion binding   • iron ion binding   • ion binding   • metal ion binding   • small molecule binding   • serotonin binding   • amine binding   • heterocyclic compound binding   • G protein-coupled amine receptor activity   • G protein-coupled serotonin receptor activity   • molecular transducer activity   • G protein-coupled receptor activity   • transmembrane signaling receptor activity   • signaling receptor activity   • Gi/o-coupled serotonin receptor activity   • neurotransmitter receptor activity   • serotonin receptor activity   • signaling receptor binding   • receptor-receptor interaction   • electron transport chain   • metabolic process   • generation of precursor metabolites and energy   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • behavior   • exploration behavior   • regulation of amine metabolic process   • dopamine metabolic process   • primary metabolic process   • catechol-containing compound metabolic process   • regulation of primary metabolic process   • amine metabolic process   • catecholamine metabolic process   • phenol-containing compound metabolic process   • regulation of catecholamine metabolic process   • regulation of metabolic process   • biogenic amine metabolic process   • regulation of dopamine metabolic process   • regulation of tube diameter   • regulation of tube size   • regulation of system process   • circulatory system process   • regulation of blood circulation   • regulation of vasoconstriction   • vascular process in circulatory system   • regulation of multicellular organismal process   • blood vessel diameter maintenance   • regulation of biological quality   • blood circulation   • vasoconstriction   • regulation of anatomical structure size   • gamma-aminobutyric acid signaling pathway   • regulation of behavior   • ammonium ion metabolic process   • serotonin metabolic process   • indole-containing compound metabolic process   • primary amino compound metabolic process   • serotonin receptor signaling pathway   • positive regulation of cell population proliferation   • regulation of cell population proliferation   • positive regulation of biological process   • positive regulation of cellular process   • regulation of localization   • regulation of hormone secretion   • transport   • hormone secretion   • localization   • regulation of secretion by cell   • secretion by cell   • signal release   • regulation of signaling   • regulation of transport   • secretion   • regulation of hormone levels   • export from cell   • establishment of localization   • regulation of secretion   • regulation of cell communication   • hormone transport   • monoamine transport   • nitrogen compound transport   • organic hydroxy compound transport   • monoatomic ion transport   • serotonin secretion   • regulation of monoatomic ion transport   • regulation of serotonin secretion   • serotonin transport   • trans-synaptic signaling   • anterograde trans-synaptic signaling   • chemical synaptic transmission   • behavioral defense response   • fear response   • behavioral fear response   • defense response   • response to stress   • multicellular organismal response to stress   • G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger   • periplasmic space   • somatodendritic compartment   • dendrite   • dendritic tree
SCOP2Domain Identifier• Ras-like P-loop GTPases   • Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• Ras-like P-loop GTPases   • Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeYGH
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodeYGH
Name4-fluoro-5-methoxy-3-[2-(pyrrolidin-1-yl)ethyl]-1H-indole
Synonyms
Identifier
FormulaC15 H19 F N2 O
Molecular Weight262.323
SMILES
PubChem10015574
Formal Charge0
Total Atoms38
Total Chiral Atoms0
Total Bonds40
Total Aromatic Bonds10

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP08908
Sequence
>8FYE_nogp_Chain_R
YQVITSLLL GTLIFCAVL GNACVVAAI ALERSLQNV ANYLIGSLA 
VTDLMVSVL VLPMAALYQ VLNKWTLGQ VTCDLFIAL DVLCCTSSI 
WHLCAIALD RYWAITDPI DYVNKRTPR RAAALISLT WLIGFLISI 
PPMLGWRTP EDRSDPDAC TISKDHGYT IYSTFGAFY IPLLLMLVL 
YGRIFRAAR FRIRKKNER NAEAKRKMA LARERKTVK TLGIIMGTF 
ILCWLPFFI VALVLPFCE SSCHMPTLL GAIINWLGY SNSLLNPVI 
YAYFNKDFQ NAFKKII


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
8PKMAAmine5-Hydroxytryptamine5-HT1AHomo sapiensBefiradolt7mGi1/β1/γ12.92024-05-29To be published
8PKM (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBefiradolt7m2.92024-05-29To be published
8PJKAAmine5-Hydroxytryptamine5-HT1AHomo sapiensST171t7mGi1/β1/γ12.42024-05-29To be published
8PJK (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensST171t7m2.42024-05-29To be published
8FYXAAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspirone-Gi1/β1/γ12.722024-05-1510.1038/s41586-024-07403-2
8FYX (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspirone-2.722024-05-1510.1038/s41586-024-07403-2
8FYTAAmine5-Hydroxytryptamine5-HT1AHomo sapiensLSD-Gi1/β1/γ12.642024-05-1510.1038/s41586-024-07403-2
8FYT (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensLSD-2.642024-05-1510.1038/s41586-024-07403-2
8FYLAAmine5-Hydroxytryptamine5-HT1AHomo sapiensVilazodone-Gi1/β1/γ12.942024-05-1510.1038/s41586-024-07403-2
8FYL (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensVilazodone-2.942024-05-1510.1038/s41586-024-07403-2
8FYEAAmine5-Hydroxytryptamine5-HT1AHomo sapiens4-F,5-MeO-PyrT-Gi1/β1/γ12.852024-05-1510.1038/s41586-024-07403-2
8FYE (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiens4-F,5-MeO-PyrT-2.852024-05-1510.1038/s41586-024-07403-2
8FY8AAmine5-Hydroxytryptamine5-HT1AHomo sapiens5-MeO-DMT-Gi1/β1/γ12.792024-05-1510.1038/s41586-024-07403-2
8FY8 (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiens5-MeO-DMT-2.792024-05-1510.1038/s41586-024-07403-2
8JT6AAmine5-Hydroxytryptamine5-HT1AHomo sapiens(R)-IHCH-7179-Gi1/β1/γ232024-02-28To be published
8JT6 (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiens(R)-IHCH-7179-32024-02-28To be published
8W8BAAmine5-Hydroxytryptamine5-HT1AHomo sapiensSEP-363856-Gi1/β1/γ232023-11-2210.1038/s41586-023-06775-1
8W8B (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensSEP-363856-32023-11-2210.1038/s41586-023-06775-1
8JSPAAmine5-Hydroxytryptamine5-HT1AHomo sapiensUlotaront-Gi1/β1/γ23.652023-11-1510.1038/s41586-023-06804-z
8JSP (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensUlotaront-3.652023-11-1510.1038/s41586-023-06804-z
7E2ZAAmine5-Hydroxytryptamine5-HT1AHomo sapiensAripiprazole-Gi1/β1/γ23.12021-04-1410.1038/s41586-021-03376-8
7E2Z (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensAripiprazole-3.12021-04-1410.1038/s41586-021-03376-8
7E2YAAmine5-Hydroxytryptamine5-HT1AHomo sapiensSerotonin-Gi1/β1/γ232021-04-1410.1038/s41586-021-03376-8
7E2Y (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensSerotonin-32021-04-1410.1038/s41586-021-03376-8
7E2XAAmine5-Hydroxytryptamine5-HT1AHomo sapiens--Gi1/β1/γ232021-04-1410.1038/s41586-021-03376-8
7E2X (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiens--32021-04-1410.1038/s41586-021-03376-8




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 8FYE_nogp.zip



You can click to copy the link of this page to easily come back here later

or use this QR code to link and share this page.



You can also  read or  download a guide explaining the meaning of all files and numerical data.