Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:?1 9.121671210
2R:R:L67 5.098528
3R:R:N72 7.6075429
4R:R:L78 7.1025419
5R:R:D82 6.652519
6R:R:V98 2.25406
7R:R:W102 7.65649
8R:R:T121 4.6725408
9R:R:H126 7.93857718
10R:R:L127 5.424518
11R:R:R134 6.0725419
12R:R:Y135 7.664509
13R:R:R148 8.186508
14R:R:W161 8.996519
15R:R:Y195 9.33508
16R:R:T200 5.105417
17R:R:F204 9.35167618
18R:R:Y205 5.5325417
19R:R:L208 6.4417
20R:R:M211 5.8975419
21R:R:Y215 5.87667609
22R:R:F219 3.842536
23R:R:E340 4.97438
24R:R:T343 2.83438
25R:R:F354 5.93619
26R:R:W358 7.44818
27R:R:L359 4.84407
28R:R:F361 11.6625418
29R:R:F362 10.524517
30R:R:I385 3.84406
31R:R:W387 8.8875408
32R:R:Y390 10.016518
33R:R:N396 9.2075419
34R:R:Y400 5.296519
35R:R:Y402 6.034506
36R:R:D406 6.2125427
37R:R:F407 6.93728
38W:W:?1 8.58111900
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:?1 R:R:Y390 35.962613.31YesYes108
2R:R:W387 R:R:Y390 26.364416.4YesYes088
3R:R:L43 R:R:W387 19.624211.39NoYes078
4R:R:L43 R:R:T39 16.24852.95NoNo075
5R:R:T39 R:R:V98 12.71521.59NoYes056
6L:L:?1 R:R:W358 1003.8YesYes108
7R:R:F354 R:R:W358 70.79446.01YesYes198
8R:R:F354 R:R:L127 60.54913.65YesYes198
9R:R:L127 R:R:Y400 62.15268.21YesYes189
10R:R:R134 R:R:Y400 58.34936.17YesYes199
11R:R:R134 W:W:?1 64.86444.88YesYes090
12R:R:Y402 W:W:?1 20.89016.28YesYes060
13R:R:N392 R:R:W358 31.624814.69NoYes098
14R:R:N392 R:R:N396 31.861110.9NoYes099
15R:R:D82 R:R:N396 34.97818.08YesYes199
16R:R:D82 R:R:N54 24.52466.73YesNo099
17R:R:N54 R:R:P397 17.1886.52NoNo099
18R:R:P397 R:R:Y402 16.33284.17NoYes096
19R:R:L83 R:R:N54 13.93614.12NoNo089
20R:R:V57 R:R:Y402 12.29895.05NoYes096
21R:R:N404 W:W:?1 34.11724.6NoYes090
22R:R:F407 R:R:N404 17.649413.29YesNo289
23R:R:D406 R:R:N404 15.11210.77YesNo279
24R:R:D406 R:R:L67 10.93174.07YesYes278
25R:R:A410 R:R:L67 18.18953.15NoYes088
26R:R:A410 R:R:E64 15.18514.53NoNo087
27R:R:F407 R:R:L67 13.13728.53YesYes288
28R:R:F354 R:R:M211 46.03358.71YesYes199
29R:R:M211 R:R:M351 58.2485.78YesNo098
30R:R:M351 R:R:Y215 57.70794.79NoYes089
31R:R:I218 R:R:Y215 61.86563.63NoYes099
32R:R:I218 R:R:Y135 60.34093.63NoYes099
33R:R:W136 R:R:Y135 45.95483.86NoYes059
34R:R:R152 R:R:W136 42.9565NoNo075
35R:R:R148 R:R:R152 29.43063.2YesNo087
36R:R:R148 R:R:V70 15.072613.08YesNo087
37R:R:P150 R:R:V70 11.37051.77NoNo057
38R:R:L127 R:R:L78 30.47714.15YesYes189
39R:R:H126 R:R:L78 24.65965.14YesYes189
40R:R:D82 R:R:S393 25.86924.42YesNo099
41R:R:L83 R:R:V87 10.0092.98NoNo086
42L:L:?1 R:R:I189 46.996.67YesNo006
43R:R:I113 R:R:I189 16.86174.42NoNo076
44R:R:C187 R:R:I113 15.3373.27NoNo097
45R:R:C187 R:R:W102 11.96699.14NoYes499
46R:R:I189 R:R:Y195 31.03976.04NoYes068
47R:R:S190 R:R:Y195 19.74236.36NoYes068
48R:R:R176 R:R:S190 16.47913.95NoNo066
49R:R:R176 R:R:R181 13.204724.52NoNo064
50L:L:?1 R:R:S199 31.5637.02YesNo008
51R:R:S199 R:R:Y195 30.094515.26NoYes088
52L:L:?1 R:R:T121 15.0673.94YesYes008
53R:R:C128 R:R:M211 11.52814.86NoYes079
54R:R:D143 R:R:R152 13.221610.72NoNo067
55R:R:P171 R:R:Y195 19.742316.69NoYes078
56R:R:P170 R:R:P171 16.47915.84NoNo087
57R:R:D192 R:R:Y195 19.74232.3NoYes068
58R:R:D192 R:R:T177 13.20472.89NoNo065
59R:R:F201 R:R:Y205 23.17435.16NoYes057
60R:R:F201 R:R:I197 21.45273.77NoNo057
61R:R:F370 R:R:I197 19.71985.02NoNo057
62R:R:F370 R:R:T196 14.45373.89NoNo057
63R:R:P369 R:R:T196 12.675812.24NoNo077
64R:R:K191 R:R:P369 10.88673.35NoNo057
65R:R:F204 R:R:W358 14.77445.01YesYes188
66L:L:?1 R:R:F362 10.262210.57YesYes107
67R:R:F204 R:R:F362 13.446619.29YesYes187
68R:R:F204 R:R:L359 34.7086.09YesYes087
69R:R:L347 R:R:Y215 25.55984.69NoYes089
70R:R:F219 R:R:L347 23.78764.87YesNo068
71R:R:F219 R:R:T343 11.08923.89YesYes368
72R:R:I363 R:R:L359 13.83487.14NoYes077
73R:R:L359 R:R:P360 18.35833.28YesNo079
74R:R:I385 R:R:P360 16.10223.39YesNo069
75R:R:I363 R:R:V367 11.55621.54NoNo076
76R:R:S393 R:R:S86 14.48183.26NoNo098
77R:R:A50 R:R:S86 11.60683.42NoNo088
78R:R:F204 R:R:Y205 19.51736.19YesYes187
79R:R:F204 R:R:F354 33.49278.57YesYes189
80R:R:R134 R:R:Y215 33.23398.23YesYes099
81R:R:D82 R:R:L78 15.10078.14YesYes199
82R:R:L127 R:R:M211 16.4064.24YesYes189
83R:R:L127 R:R:N396 16.03476.87YesYes189
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:?1 R:R:D116 12.69 1 Yes No 0 8 0 1
L:L:?1 R:R:V117 9.95 1 Yes No 0 8 0 1
L:L:?1 R:R:C120 8.48 1 Yes No 0 7 0 1
L:L:?1 R:R:T121 3.94 1 Yes Yes 0 8 0 1
L:L:?1 R:R:I189 6.67 1 Yes No 0 6 0 1
L:L:?1 R:R:S199 7.02 1 Yes No 0 8 0 1
L:L:?1 R:R:T200 3.94 1 Yes Yes 0 7 0 1
L:L:?1 R:R:W358 3.8 1 Yes Yes 0 8 0 1
L:L:?1 R:R:F361 23.59 1 Yes Yes 0 8 0 1
L:L:?1 R:R:F362 10.57 1 Yes Yes 0 7 0 1
L:L:?1 R:R:N386 5.5 1 Yes No 0 7 0 1
L:L:?1 R:R:Y390 13.31 1 Yes Yes 0 8 0 1
R:R:L90 R:R:Y390 4.69 0 No Yes 8 8 2 1
R:R:A93 R:R:Y390 5.34 0 No Yes 7 8 2 1
R:R:I113 R:R:I189 4.42 0 No No 7 6 2 1
R:R:D116 R:R:Y390 10.34 1 No Yes 8 8 1 1
R:R:S168 R:R:V117 6.46 0 No No 8 8 2 1
R:R:C120 R:R:W358 5.22 1 No Yes 7 8 1 1
R:R:G164 R:R:T121 3.64 0 No Yes 8 8 2 1
R:R:I167 R:R:T121 6.08 0 No Yes 8 8 2 1
R:R:A203 R:R:T121 5.03 0 No Yes 8 8 2 1
R:R:F354 R:R:I124 3.77 1 Yes No 9 8 2 2
R:R:I124 R:R:W358 11.74 1 No Yes 8 8 2 1
R:R:I189 R:R:Y195 6.04 0 No Yes 6 8 1 2
R:R:S199 R:R:Y195 15.26 0 No Yes 8 8 1 2
R:R:T200 R:R:Y205 3.75 1 Yes Yes 7 7 1 2
R:R:F362 R:R:T200 3.89 1 Yes Yes 7 7 1 1
R:R:L366 R:R:T200 8.84 1 No Yes 7 7 2 1
R:R:F204 R:R:Y205 6.19 1 Yes Yes 8 7 2 2
R:R:F204 R:R:F354 8.57 1 Yes Yes 8 9 2 2
R:R:F204 R:R:W358 5.01 1 Yes Yes 8 8 2 1
R:R:F204 R:R:F362 19.29 1 Yes Yes 8 7 2 1
R:R:L366 R:R:Y205 7.03 1 No Yes 7 7 2 2
R:R:F354 R:R:W358 6.01 1 Yes Yes 9 8 2 1
R:R:F362 R:R:W358 6.01 1 Yes Yes 7 8 1 1
R:R:G389 R:R:W358 7.04 0 No Yes 8 8 2 1
R:R:N392 R:R:W358 14.69 0 No Yes 9 8 2 1
R:R:F361 R:R:F362 12.86 1 Yes Yes 8 7 1 1
R:R:A365 R:R:F361 4.16 0 No Yes 8 8 2 1
R:R:F361 R:R:N386 6.04 1 Yes No 8 7 1 1
R:R:W387 R:R:Y390 16.4 0 Yes Yes 8 8 2 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
R:R:G53 R:R:Y402 4.35 0 No Yes 9 6 2 1
R:R:V57 R:R:Y402 5.05 0 No Yes 9 6 2 1
R:R:I130 R:R:R134 5.01 1 No Yes 9 9 2 1
R:R:I130 R:R:Y400 4.84 1 No Yes 9 9 2 2
R:R:R134 R:R:Y215 8.23 1 Yes Yes 9 9 1 2
R:R:R134 R:R:Y400 6.17 1 Yes Yes 9 9 1 2
R:R:R134 W:W:?1 4.88 1 Yes Yes 9 0 1 0
R:R:K345 W:W:?1 13.22 0 No Yes 7 0 1 0
R:R:T346 W:W:?1 8.88 0 No Yes 8 0 1 0
R:R:I349 W:W:?1 5.73 0 No Yes 7 0 1 0
R:R:P397 R:R:Y402 4.17 0 No Yes 9 6 2 1
R:R:V398 W:W:?1 3.99 0 No Yes 6 0 1 0
R:R:F411 R:R:Y402 10.32 0 No Yes 8 6 2 1
R:R:Y402 W:W:?1 6.28 0 Yes Yes 6 0 1 0
R:R:F403 W:W:?1 26.09 0 No Yes 8 0 1 0
R:R:D406 R:R:N404 10.77 2 Yes No 7 9 2 1
R:R:F407 R:R:N404 13.29 2 Yes No 8 9 2 1
R:R:N404 W:W:?1 4.6 2 No Yes 9 0 1 0
R:R:K405 R:R:Q408 9.49 0 No No 6 9 2 1
R:R:D406 R:R:F407 5.97 2 Yes Yes 7 8 2 2
R:R:F407 R:R:F411 4.29 2 Yes No 8 8 2 2
R:R:Q408 W:W:?1 3.56 0 No Yes 9 0 1 0
R:R:K412 R:R:Q408 2.71 0 No No 6 9 2 1
R:R:K342 R:R:T346 1.5 0 No No 8 8 2 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 8FYE_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3.63
Number of Linked Nodes 274
Number of Links 304
Number of Hubs 38
Number of Links mediated by Hubs 152
Number of Communities 5
Number of Nodes involved in Communities 44
Number of Links involved in Communities 67
Path Summary
Number Of Nodes in MetaPath 84
Number Of Links MetaPath 83
Number of Shortest Paths 48803
Length Of Smallest Path 3
Average Path Length 11.3836
Length of Longest Path 27
Minimum Path Strength 1.41
Average Path Strength 6.26049
Maximum Path Strength 19.655
Minimum Path Correlation 0.7
Average Path Correlation 0.937503
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 5.88235
Average % Of Corr. Nodes 59.8617
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 51.2802
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function• cation binding   • binding   • ion binding   • serotonin binding   • amine binding   • heterocyclic compound binding   • small molecule binding   • G protein-coupled amine receptor activity   • G protein-coupled serotonin receptor activity   • molecular transducer activity   • G protein-coupled receptor activity   • transmembrane signaling receptor activity   • signaling receptor activity   • Gi/o-coupled serotonin receptor activity   • neurotransmitter receptor activity   • serotonin receptor activity   • protein binding   • signaling receptor binding   • receptor-receptor interaction   • tetrapyrrole binding   • heme binding   • electron transfer activity   • transition metal ion binding   • iron ion binding   • metal ion binding   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • cell communication   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction
Gene OntologyBiological Process• cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • cell communication   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction   • behavior   • multicellular organismal process   • exploration behavior   • regulation of amine metabolic process   • dopamine metabolic process   • primary metabolic process   • catechol-containing compound metabolic process   • regulation of primary metabolic process   • amine metabolic process   • catecholamine metabolic process   • phenol-containing compound metabolic process   • metabolic process   • regulation of catecholamine metabolic process   • regulation of metabolic process   • biogenic amine metabolic process   • regulation of dopamine metabolic process   • adult behavior   • regulation of tube diameter   • system process   • regulation of tube size   • regulation of system process   • circulatory system process   • regulation of blood circulation   • regulation of vasoconstriction   • vascular process in circulatory system   • regulation of multicellular organismal process   • blood vessel diameter maintenance   • regulation of biological quality   • blood circulation   • vasoconstriction   • regulation of anatomical structure size   • cell-cell signaling   • gamma-aminobutyric acid signaling pathway   • regulation of behavior   • serotonin metabolic process   • indole-containing compound metabolic process   • cellular response to nitrogen compound   • response to dopamine   • serotonin receptor signaling pathway   • cellular response to dopamine   • response to monoamine   • response to oxygen-containing compound   • response to nitrogen compound   • cellular response to oxygen-containing compound   • cellular response to chemical stimulus   • response to catecholamine   • cellular response to monoamine stimulus   • response to chemical   • cellular response to catecholamine stimulus   • cell population proliferation   • positive regulation of cell population proliferation   • regulation of cell population proliferation   • positive regulation of biological process   • positive regulation of cellular process   • regulation of localization   • regulation of hormone secretion   • transport   • hormone secretion   • localization   • regulation of secretion by cell   • secretion by cell   • signal release   • regulation of signaling   • regulation of transport   • secretion   • regulation of hormone levels   • export from cell   • establishment of localization   • regulation of secretion   • regulation of cell communication   • hormone transport   • monoamine transport   • nitrogen compound transport   • organic hydroxy compound transport   • monoatomic ion transport   • serotonin secretion   • regulation of monoatomic ion transport   • regulation of serotonin secretion   • serotonin transport   • trans-synaptic signaling   • synaptic signaling   • anterograde trans-synaptic signaling   • chemical synaptic transmission   • behavioral defense response   • fear response   • behavioral fear response   • defense response   • response to stress   • multicellular organismal response to stress   • G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger   • electron transport chain   • generation of precursor metabolites and energy   • cell periphery   • cellular anatomical structure   • plasma membrane   • membrane   • somatodendritic compartment   • cell projection   • dendrite   • dendritic tree   • neuron projection   • plasma membrane bounded cell projection   • synapse   • cell junction   • periplasmic space   • protein binding   • binding   • G-protein beta-subunit binding   • fibroblast proliferation   • adenylate cyclase-activating dopamine receptor signaling pathway   • G protein-coupled dopamine receptor signaling pathway   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • response to ketone   • response to prostaglandin   • response to lipid   • response to endogenous stimulus   • response to alcohol   • cellular response to prostaglandin stimulus   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to alcohol   • response to hormone   • cellular response to lipid   • response to prostaglandin E   • cellular response to ketone   • cellular response to hormone stimulus   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cytoplasmic side of plasma membrane   • GTPase complex   • extrinsic component of membrane   • extrinsic component of cytoplasmic side of plasma membrane   • extracellular exosome   • membrane-bounded organelle   • extracellular vesicle   • extracellular organelle   • extracellular region   • organelle   • extracellular space   • vesicle   • extracellular membrane-bounded organelle   • enzyme binding   • GTPase binding   • protein-containing complex binding   • pyrophosphatase activity   • GTPase activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • signaling receptor complex adaptor activity   • protein-macromolecule adaptor activity   • molecular adaptor activity   • signaling adaptor activity   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of taste   • developmental process   • sensory organ development   • eye development   • animal organ development   • retina development in camera-type eye   • visual system development   • multicellular organism development   • camera-type eye development   • anatomical structure development   • sensory system development   • system development   • small GTPase-mediated signal transduction   • Ras protein signal transduction   • intracellular signal transduction   • intracellular signaling cassette   • phospholipase C-activating G protein-coupled receptor signaling pathway   • cellular response to acetylcholine   • acetylcholine receptor signaling pathway   • postsynaptic signal transduction   • G protein-coupled acetylcholine receptor signaling pathway   • response to acetylcholine   • non-motile cilium   • 9+0 non-motile cilium   • cilium   • photoreceptor disc membrane   • photoreceptor outer segment   • photoreceptor cell cilium   • organelle membrane   • intracellular anatomical structure   • cytoplasm   • cytosol   • vacuolar membrane   • lytic vacuole   • vacuole   • intracellular membrane-bounded organelle   • intracellular organelle   • lytic vacuole membrane   • bounding membrane of organelle   • lysosomal membrane   • lysosome   • D2 dopamine receptor binding   • signaling receptor binding   • G protein-coupled receptor binding   • dopamine receptor binding   • enzyme regulator activity   • adenylate cyclase inhibitor activity   • cyclase regulator activity   • molecular function inhibitor activity   • cyclase inhibitor activity   • molecular function regulator activity   • enzyme inhibitor activity   • adenylate cyclase regulator activity   • guanyl nucleotide binding   • GTP binding   • nucleotide binding   • guanyl ribonucleotide binding   • purine ribonucleotide binding   • purine ribonucleoside triphosphate binding   • nucleoside phosphate binding   • ion binding   • purine nucleotide binding   • anion binding   • heterocyclic compound binding   • carbohydrate derivative binding   • ribonucleotide binding   • small molecule binding   • cation binding   • magnesium ion binding   • metal ion binding   • GDP binding   • G protein-coupled serotonin receptor binding   • G-protein beta/gamma-subunit complex binding   • G protein activity   • neuropeptide signaling pathway   • response to peptide hormone   • cell division   • leukocyte migration   • immune system process   • mononuclear cell migration   • lymphocyte migration   • cell migration   • T cell migration   • cell motility   • regulation of steroid biosynthetic process   • regulation of cholesterol biosynthetic process   • regulation of cholesterol metabolic process   • steroid metabolic process   • regulation of lipid metabolic process   • sterol metabolic process   • cholesterol metabolic process   • lipid biosynthetic process   • alcohol metabolic process   • positive regulation of metabolic process   • regulation of small molecule metabolic process   • positive regulation of biosynthetic process   • positive regulation of lipid metabolic process   • small molecule metabolic process   • steroid biosynthetic process   • regulation of biosynthetic process   • secondary alcohol biosynthetic process   • regulation of alcohol biosynthetic process   • small molecule biosynthetic process   • regulation of steroid metabolic process   • cholesterol biosynthetic process   • positive regulation of cholesterol biosynthetic process   • secondary alcohol metabolic process   • positive regulation of steroid biosynthetic process   • biosynthetic process   • sterol biosynthetic process   • positive regulation of lipid biosynthetic process   • regulation of sterol biosynthetic process   • alcohol biosynthetic process   • positive regulation of cholesterol metabolic process   • positive regulation of steroid metabolic process   • regulation of lipid biosynthetic process   • positive regulation of small molecule metabolic process   • positive regulation of alcohol biosynthetic process   • positive regulation of sterol biosynthetic process   • lipid metabolic process   • cell surface receptor signaling pathway   • response to cytokine   • response to chemokine   • cytokine-mediated signaling pathway   • cellular response to chemokine   • chemokine-mediated signaling pathway   • response to peptide   • cellular response to cytokine stimulus   • relaxation of smooth muscle   • regulation of muscle system process   • muscle system process   • relaxation of muscle   • positive regulation of relaxation of smooth muscle   • positive regulation of relaxation of muscle   • positive regulation of multicellular organismal process   • regulation of relaxation of smooth muscle   • regulation of relaxation of muscle   • negative regulation of protein transport   • establishment of protein localization   • negative regulation of biological process   • negative regulation of transport   • negative regulation of secretion   • negative regulation of hormone secretion   • negative regulation of secretion by cell   • intracellular protein localization   • regulation of peptide hormone secretion   • negative regulation of peptide hormone secretion   • establishment of protein localization to extracellular region   • negative regulation of establishment of protein localization   • protein secretion   • regulation of protein secretion   • negative regulation of protein secretion   • regulation of protein localization   • regulation of peptide secretion   • negative regulation of signaling   • negative regulation of cell communication   • protein localization to extracellular region   • negative regulation of peptide secretion   • peptide secretion   • negative regulation of cellular process   • negative regulation of protein localization   • regulation of peptide transport   • regulation of establishment of protein localization   • regulation of protein transport   • peptide transport   • negative regulation of insulin secretion   • protein transport   • regulation of insulin secretion   • peptide hormone secretion   • macromolecule localization   • insulin secretion   • regulation of cytoskeleton organization   • regulation of cellular component organization   • microtubule cytoskeleton organization   • regulation of mitotic spindle organization   • mitotic cell cycle   • cellular component organization   • cell cycle   • cellular component organization or biogenesis   • regulation of cell cycle   • microtubule cytoskeleton organization involved in mitosis   • spindle organization   • cell cycle process   • regulation of cell cycle process   • regulation of microtubule-based process   • regulation of spindle organization   • regulation of organelle organization   • mitotic spindle organization   • organelle organization   • mitotic cell cycle process   • microtubule-based process   • cytoskeleton organization   • regulation of microtubule cytoskeleton organization   • positive regulation of protein localization to cell periphery   • protein localization to cell periphery   • positive regulation of protein localization to cell cortex   • regulation of protein localization to cell periphery   • regulation of protein localization to cell cortex   • positive regulation of protein localization   • protein localization to cell cortex   • cellular response to forskolin   • response to forskolin   • midbody   • nucleus   • membrane-enclosed lumen   • intracellular membraneless organelle   • nucleolus   • intracellular organelle lumen   • organelle lumen   • membraneless organelle   • nuclear lumen   • cell cortex   • centrosome   • microtubule organizing center   • cytoskeleton   • microtubule cytoskeleton   • centriolar satellite   • sperm principal piece   • 9+2 motile cilium   • sperm flagellum   • motile cilium   • nucleoplasm   • Golgi apparatus   • endomembrane system   • ciliary basal body
Gene OntologyCellular Component
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain   • Ras-like P-loop GTPases
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain   • Ras-like P-loop GTPases
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeYGH
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodeYGH
Name4-fluoro-5-methoxy-3-[2-(pyrrolidin-1-yl)ethyl]-1H-indole
Synonyms
Identifier
FormulaC15 H19 F N2 O
Molecular Weight262.323
SMILES
PubChem10015574
Formal Charge0
Total Atoms38
Total Chiral Atoms0
Total Bonds40
Total Aromatic Bonds10

CodeJ40
PDB ResiduesW:W:?1
Environment DetailsOpen EMBL-EBI Page
CodeJ40
Name[(2R)-1-[oxidanyl-[(2R,3R,5S,6R)-2,3,5,6-tetrakis(oxidanyl)-4-phosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-3-tetradecanoyloxy-propan-2-yl] (5E,8E)-hexadeca-5,8,11,14-tetraenoate
Synonyms
Identifier
FormulaC39 H68 O16 P2
Molecular Weight854.895
SMILES
PubChem
Formal Charge0
Total Atoms125
Total Chiral Atoms5
Total Bonds125
Total Aromatic Bonds0

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP08908
Sequence
>8FYE_nogp_Chain_R
YQVITSLLL GTLIFCAVL GNACVVAAI ALERSLQNV ANYLIGSLA 
VTDLMVSVL VLPMAALYQ VLNKWTLGQ VTCDLFIAL DVLCCTSSI 
WHLCAIALD RYWAITDPI DYVNKRTPR RAAALISLT WLIGFLISI 
PPMLGWRTP EDRSDPDAC TISKDHGYT IYSTFGAFY IPLLLMLVL 
YGRIFRAAR FRIRKKNER NAEAKRKMA LARERKTVK TLGIIMGTF 
ILCWLPFFI VALVLPFCE SSCHMPTLL GAIINWLGY SNSLLNPVI 
YAYFNKDFQ NAFKKII


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
7E2XAAmine5-Hydroxytryptamine5-HT1AHomo sapiens-PtdIns4PGi1/β1/γ232021-04-14doi.org/10.1038/s41586-021-03376-8
7E2X (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiens-PtdIns4P32021-04-14doi.org/10.1038/s41586-021-03376-8
7E2YAAmine5-Hydroxytryptamine5-HT1AHomo sapiensSerotoninPtdIns4PGi1/β1/γ232021-04-14doi.org/10.1038/s41586-021-03376-8
7E2Y (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensSerotoninPtdIns4P32021-04-14doi.org/10.1038/s41586-021-03376-8
7E2ZAAmine5-Hydroxytryptamine5-HT1AHomo sapiensAripiprazolePtdIns4PGi1/β1/γ23.12021-04-14doi.org/10.1038/s41586-021-03376-8
7E2Z (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensAripiprazolePtdIns4P3.12021-04-14doi.org/10.1038/s41586-021-03376-8
8JSPAAmine5-Hydroxytryptamine5-HT1AHomo sapiensUlotaront-Gi1/β1/γ23.652023-11-15doi.org/10.1038/s41586-023-06804-z
8JSP (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensUlotaront-3.652023-11-15doi.org/10.1038/s41586-023-06804-z
8W8BAAmine5-Hydroxytryptamine5-HT1AHomo sapiensSEP-363856-Gi1/β1/γ232023-11-22doi.org/10.1038/s41586-023-06775-1
8W8B (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensSEP-363856-32023-11-22doi.org/10.1038/s41586-023-06775-1
8FY8AAmine5-Hydroxytryptamine5-HT1AHomo sapiens5-MeO-DMTPtdIns4PGi1/β1/γ12.792024-05-15doi.org/10.1038/s41586-024-07403-2
8FY8 (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiens5-MeO-DMTPtdIns4P2.792024-05-15doi.org/10.1038/s41586-024-07403-2
8FYEAAmine5-Hydroxytryptamine5-HT1AHomo sapiens4-F,5-MeO-PyrTPtdIns4PGi1/β1/γ12.852024-05-15doi.org/10.1038/s41586-024-07403-2
8FYE (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiens4-F,5-MeO-PyrTPtdIns4P2.852024-05-15doi.org/10.1038/s41586-024-07403-2
8FYLAAmine5-Hydroxytryptamine5-HT1AHomo sapiensVilazodonePtdIns4PGi1/β1/γ12.942024-05-15doi.org/10.1038/s41586-024-07403-2
8FYL (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensVilazodonePtdIns4P2.942024-05-15doi.org/10.1038/s41586-024-07403-2
8FYTAAmine5-Hydroxytryptamine5-HT1AHomo sapiensLSDPtdIns4PGi1/β1/γ12.642024-05-15doi.org/10.1038/s41586-024-07403-2
8FYT (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensLSDPtdIns4P2.642024-05-15doi.org/10.1038/s41586-024-07403-2
8FYXAAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspironePtdIns4PGi1/β1/γ12.722024-05-15doi.org/10.1038/s41586-024-07403-2
8FYX (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspironePtdIns4P2.722024-05-15doi.org/10.1038/s41586-024-07403-2
8PJKAAmine5-Hydroxytryptamine5-HT1AHomo sapiensST171-Gi1/β1/γ12.42024-05-29doi.org/10.1126/sciadv.adv9267
8PJK (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensST171-2.42024-05-29doi.org/10.1126/sciadv.adv9267
8PKMAAmine5-Hydroxytryptamine5-HT1AHomo sapiensBefiradol-Gi1/β1/γ12.92024-05-29doi.org/10.1126/sciadv.adv9267
8PKM (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBefiradol-2.92024-05-29doi.org/10.1126/sciadv.adv9267
8JT6AAmine5-Hydroxytryptamine5-HT1AHomo sapiens(R)-IHCH-7179PtdIns4PGi1/β1/γ232024-02-28doi.org/10.1016/j.cell.2024.02.034
8JT6 (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiens(R)-IHCH-7179PtdIns4P32024-02-28doi.org/10.1016/j.cell.2024.02.034
9GL2AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBefiradol-Gs/β1/γ23.22025-07-02doi.org/10.1126/sciadv.adv9267
9GL2 (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBefiradol-3.22025-07-02doi.org/10.1126/sciadv.adv9267
9DYDAAmine5-Hydroxytryptamine5-HT1AHomo sapiensAsenapinePtdIns4PGo/β1/γ22.962025-08-13doi.org/10.1126/sciadv.adu9851
9DYD (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensAsenapinePtdIns4P2.962025-08-13doi.org/10.1126/sciadv.adu9851
9DYEAAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspironePtdIns4PGo/β1/γ22.92025-08-13doi.org/10.1126/sciadv.adu9851
9DYE (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspironePtdIns4P2.92025-08-13doi.org/10.1126/sciadv.adu9851
9DYFAAmine5-Hydroxytryptamine5-HT1AHomo sapiensAsenapinePtdIns4PGi1/β1/γ22.742025-08-13doi.org/10.1126/sciadv.adu9851
9DYF (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensAsenapinePtdIns4P2.742025-08-13doi.org/10.1126/sciadv.adu9851
9MD1AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspironePtdIns4PGz/β1/γ23.032025-08-13doi.org/10.1126/sciadv.adu9851
9MD1 (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspironePtdIns4P3.032025-08-13doi.org/10.1126/sciadv.adu9851
9VJ5AAmine5-Hydroxytryptamine5-HT1AHomo sapiensGepirone-Go/β1/γ22.692025-11-12To be published
9VJ5 (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensGepirone-2.692025-11-12To be published
9VJ6AAmine5-Hydroxytryptamine5-HT1AHomo sapiensF-15599-Gi3/β1/γ22.622025-11-12To be published
9VJ6 (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensF-15599-2.622025-11-12To be published
9VJEAAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspirone-Go/β1/γ22.472025-11-12To be published
9VJE (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspirone-2.472025-11-12To be published
9VJFAAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspirone-Gi3/β1/γ22.72025-11-12To be published
9VJF (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspirone-2.72025-11-12To be published
9VJGAAmine5-Hydroxytryptamine5-HT1AHomo sapiens8-OH-DPAT-chim(NtGi2-Gz)/β1/γ22.672025-11-12To be published
9VJG (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiens8-OH-DPAT-2.672025-11-12To be published
9VMYAAmine5-Hydroxytryptamine5-HT1AHomo sapiensTMU4142-Go/β1/γ22.862025-11-12To be published
9VMY (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensTMU4142-2.862025-11-12To be published
9VNFAAmine5-Hydroxytryptamine5-HT1AHomo sapiensPindolol-Go/β1/γ22.742025-11-12To be published
9VNF (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensPindolol-2.742025-11-12To be published
9KVGAAmine5-Hydroxytryptamine5-HT1AHomo sapiens5-MeO-DMTPtdIns4PGi1/β1/γ22.632025-12-03To be published
9KVG (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiens5-MeO-DMTPtdIns4P2.632025-12-03To be published
9KVHAAmine5-Hydroxytryptamine5-HT1AHomo sapiensCinobufoteninePtdIns4PGi1/β1/γ22.592025-12-03To be published
9KVH (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensCinobufoteninePtdIns4P2.592025-12-03To be published
9KVIAAmine5-Hydroxytryptamine5-HT1AHomo sapiensBufoteninPtdIns4PGi1/β1/γ22.542025-12-03To be published
9KVI (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBufoteninPtdIns4P2.542025-12-03To be published
9HYIAAmine5-Hydroxytryptamine5-HT1AHomo sapiensDP81-Gi1/β1/γ22.32026-01-21To be published
9HYI (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensDP81-2.32026-01-21To be published




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Download 8FYE_nogp.zip



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