Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:?1 7.98751220
2R:R:L67 4.086518
3R:R:N72 5.874519
4R:R:D82 5.572519
5R:R:L90 3.695408
6R:R:V98 3.7725446
7R:R:W102 8.26659
8R:R:C109 5.0475459
9R:R:S122 8.0775438
10R:R:I124 5.8375428
11R:R:H126 8.228538
12R:R:R134 5.72419
13R:R:Y135 8.2875409
14R:R:R148 10.4975408
15R:R:W161 8.21539
16R:R:I189 3.7825406
17R:R:Y195 8.4275408
18R:R:F204 8.975408
19R:R:Y205 8.5125467
20R:R:M211 4.1275419
21R:R:Y215 5.49833619
22R:R:F219 5.9175406
23R:R:F354 5.07409
24R:R:W358 7.55833628
25R:R:L359 4.84407
26R:R:F361 6.672528
27R:R:F362 12.4075427
28R:R:W387 6.9575408
29R:R:Y390 6.196528
30R:R:N396 7.8375419
31R:R:Y400 6.0025419
32R:R:Y402 5.4675406
33R:R:D406 6.925417
34R:R:F407 6.81286718
35R:R:F411 4.625408
36W:W:?1 9.23714710
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:?1 R:R:I189 72.26514.2YesYes006
2R:R:I113 R:R:I189 64.37892.94NoYes076
3R:R:C109 R:R:I113 40.06553.27YesNo597
4R:R:C109 R:R:W102 23.8026.53YesYes599
5R:R:L104 R:R:W102 32.17417.97NoYes079
6R:R:L104 R:R:L95 27.3362.77NoNo076
7R:R:L95 R:R:L99 19.92024.15NoNo465
8R:R:L99 R:R:V98 17.53692.98NoYes456
9R:R:Q36 R:R:V98 10.05985.73NoYes446
10R:R:C187 R:R:I113 23.52073.27NoNo597
11R:R:C187 R:R:W102 22.436516.98NoYes599
12L:L:?1 R:R:Y390 21.96083.45YesYes208
13R:R:L90 R:R:Y390 11.46635.86YesYes088
14L:L:?1 R:R:I124 78.62224.2YesYes208
15R:R:F354 R:R:I124 85.57777.54YesYes098
16R:R:F354 R:R:M211 1003.73YesYes099
17R:R:M211 R:R:Y215 77.67093.59YesYes199
18R:R:R134 R:R:Y215 66.70597.2YesYes199
19R:R:R134 W:W:?1 70.97633.25YesYes190
20R:R:Y402 W:W:?1 25.62276.28YesYes060
21L:L:?1 R:R:W358 13.696110.89YesYes208
22R:R:N392 R:R:W358 22.50816.78NoYes098
23R:R:N392 R:R:N396 21.34212.26NoYes099
24R:R:V57 R:R:Y402 10.84235.05NoYes096
25R:R:N404 W:W:?1 33.14074.6NoYes190
26R:R:F407 R:R:N404 18.155812.08YesNo189
27R:R:D406 R:R:N404 13.593813.46YesNo179
28R:R:C128 R:R:M211 48.93884.86NoYes079
29R:R:C128 R:R:L210 47.71133.17NoNo077
30R:R:L210 R:R:L214 46.47375.54NoNo077
31R:R:L132 R:R:L214 29.45334.15NoNo067
32R:R:L132 R:R:W136 28.072411.39NoNo065
33R:R:R152 R:R:W136 26.67627NoNo075
34R:R:R148 R:R:R152 22.5494.26YesNo087
35R:R:R148 R:R:V70 12.310115.69YesNo087
36L:L:?1 R:R:V117 32.77258.77YesNo008
37R:R:S168 R:R:V117 31.63714.85NoNo088
38R:R:L118 R:R:S168 27.81673NoNo068
39R:R:L118 R:R:W161 25.21865.69NoYes069
40R:R:L78 R:R:Y400 11.22593.52NoYes199
41R:R:C109 R:R:D110 18.03823.11YesNo097
42R:R:D110 R:R:R181 16.81584.76NoNo074
43L:L:?1 R:R:T121 11.43565.42YesNo008
44R:R:L214 R:R:Y135 18.22234.69NoYes079
45R:R:I189 R:R:Y195 11.41513.63YesYes068
46L:L:?1 R:R:S199 10.32076.63YesNo008
47R:R:D192 R:R:Y195 10.18262.3NoYes068
48R:R:R176 R:R:R181 15.583310.66NoNo064
49R:R:D180 R:R:R176 13.08758.34NoNo046
50L:L:?1 R:R:F362 13.772812.54YesYes207
51R:R:F204 R:R:F362 21.275519.29YesYes087
52R:R:F204 R:R:Y205 19.64925.16YesYes087
53R:R:F201 R:R:Y205 15.578214.44NoYes657
54R:R:F201 R:R:I197 14.31493.77NoNo057
55R:R:F370 R:R:I197 12.9295.02NoNo057
56R:R:L347 R:R:Y215 18.26834.69NoYes089
57R:R:F219 R:R:L347 16.783.65YesNo068
58L:L:?1 R:R:F361 11.04188.96YesYes208
59R:R:F361 R:R:N386 21.54664.83YesNo087
60R:R:I385 R:R:N386 18.49842.83NoNo067
61R:R:F361 R:R:W358 10.71965.01YesYes288
62R:R:R134 R:R:Y400 15.16396.17YesYes199
63R:R:F204 R:R:F354 17.0465.36YesYes089
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:?1 R:R:D116 17.97 2 Yes No 0 8 0 1
L:L:?1 R:R:V117 8.77 2 Yes No 0 8 0 1
L:L:?1 R:R:C120 9.34 2 Yes No 0 7 0 1
L:L:?1 R:R:T121 5.42 2 Yes No 0 8 0 1
L:L:?1 R:R:I124 4.2 2 Yes Yes 0 8 0 1
L:L:?1 R:R:I189 4.2 2 Yes Yes 0 6 0 1
L:L:?1 R:R:S199 6.63 2 Yes No 0 8 0 1
L:L:?1 R:R:A203 3.48 2 Yes No 0 8 0 1
L:L:?1 R:R:W358 10.89 2 Yes Yes 0 8 0 1
L:L:?1 R:R:F361 8.96 2 Yes Yes 0 8 0 1
L:L:?1 R:R:F362 12.54 2 Yes Yes 0 7 0 1
L:L:?1 R:R:Y390 3.45 2 Yes Yes 0 8 0 1
R:R:C120 R:R:V85 3.42 0 No No 7 8 1 2
R:R:D116 R:R:V89 4.38 2 No No 8 8 1 2
R:R:V89 R:R:Y390 3.79 2 No Yes 8 8 2 1
R:R:L90 R:R:Y390 5.86 0 Yes Yes 8 8 2 1
R:R:D116 R:R:Y390 9.2 2 No Yes 8 8 1 1
R:R:S168 R:R:V117 4.85 0 No No 8 8 2 1
R:R:G164 R:R:T121 3.64 0 No No 8 8 2 1
R:R:I167 R:R:T121 4.56 0 No No 8 8 2 1
R:R:I124 R:R:P207 3.39 2 Yes No 8 9 1 2
R:R:F354 R:R:I124 7.54 0 Yes Yes 9 8 2 1
R:R:I124 R:R:W358 8.22 2 Yes Yes 8 8 1 1
R:R:I189 R:R:K191 4.36 0 Yes No 6 5 1 2
R:R:I189 R:R:Y195 3.63 0 Yes Yes 6 8 1 2
R:R:S199 R:R:Y195 15.26 0 No Yes 8 8 1 2
R:R:F204 R:R:F354 5.36 0 Yes Yes 8 9 2 2
R:R:F204 R:R:F362 19.29 0 Yes Yes 8 7 2 1
R:R:F361 R:R:W358 5.01 2 Yes Yes 8 8 1 1
R:R:F362 R:R:W358 6.01 2 Yes Yes 7 8 1 1
R:R:G389 R:R:W358 8.44 0 No Yes 8 8 2 1
R:R:N392 R:R:W358 6.78 0 No Yes 9 8 2 1
R:R:F361 R:R:F362 11.79 2 Yes Yes 8 7 1 1
R:R:F361 R:R:N386 4.83 2 Yes No 8 7 1 2
R:R:W387 R:R:Y390 8.68 0 Yes Yes 8 8 2 1
R:R:I113 R:R:I189 2.94 5 No Yes 7 6 2 1
R:R:A365 R:R:F361 2.77 0 No Yes 8 8 2 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
R:R:G53 R:R:Y402 4.35 0 No Yes 9 6 2 1
R:R:V57 R:R:Y402 5.05 0 No Yes 9 6 2 1
R:R:I130 R:R:R134 6.26 1 No Yes 9 9 2 1
R:R:I130 R:R:Y400 8.46 1 No Yes 9 9 2 2
R:R:R134 R:R:Y215 7.2 1 Yes Yes 9 9 1 2
R:R:R134 R:R:Y400 6.17 1 Yes Yes 9 9 1 2
R:R:R134 W:W:?1 3.25 1 Yes Yes 9 0 1 0
R:R:I349 R:R:K345 4.36 1 No No 7 7 1 1
R:R:K345 W:W:?1 3.78 1 No Yes 7 0 1 0
R:R:T346 W:W:?1 10.85 0 No Yes 8 0 1 0
R:R:I349 R:R:I399 4.42 1 No No 7 8 1 2
R:R:I349 W:W:?1 5.73 1 No Yes 7 0 1 0
R:R:F403 R:R:V398 5.24 0 No No 8 6 1 2
R:R:F411 R:R:Y402 6.19 0 Yes Yes 8 6 2 1
R:R:Y402 W:W:?1 6.28 0 Yes Yes 6 0 1 0
R:R:F403 W:W:?1 30.17 0 No Yes 8 0 1 0
R:R:D406 R:R:N404 13.46 1 Yes No 7 9 2 1
R:R:F407 R:R:N404 12.08 1 Yes No 8 9 2 1
R:R:N404 W:W:?1 4.6 1 No Yes 9 0 1 0
R:R:D406 R:R:F407 4.78 1 Yes Yes 7 8 2 2
R:R:F407 R:R:F411 5.36 1 Yes Yes 8 8 2 2
R:R:K342 R:R:T346 1.5 0 No No 8 8 2 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 9DYD_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3.15
Number of Linked Nodes 266
Number of Links 291
Number of Hubs 36
Number of Links mediated by Hubs 135
Number of Communities 7
Number of Nodes involved in Communities 51
Number of Links involved in Communities 71
Path Summary
Number Of Nodes in MetaPath 64
Number Of Links MetaPath 63
Number of Shortest Paths 43283
Length Of Smallest Path 3
Average Path Length 12.3108
Length of Longest Path 28
Minimum Path Strength 1.17
Average Path Strength 5.78044
Maximum Path Strength 20.51
Minimum Path Correlation 0.7
Average Path Correlation 0.937044
Maximum Path Correlation 1
Minimum % Of Corr. Nodes 5.88235
Average % Of Corr. Nodes 55.9984
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 49.1286
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function• cation binding   • binding   • ion binding   • serotonin binding   • amine binding   • heterocyclic compound binding   • small molecule binding   • G protein-coupled amine receptor activity   • G protein-coupled serotonin receptor activity   • molecular transducer activity   • G protein-coupled receptor activity   • transmembrane signaling receptor activity   • signaling receptor activity   • Gi/o-coupled serotonin receptor activity   • neurotransmitter receptor activity   • serotonin receptor activity   • protein binding   • signaling receptor binding   • receptor-receptor interaction   • tetrapyrrole binding   • heme binding   • electron transfer activity   • transition metal ion binding   • iron ion binding   • metal ion binding   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • cell communication   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction
Gene OntologyBiological Process• cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • cell communication   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction   • behavior   • multicellular organismal process   • exploration behavior   • regulation of amine metabolic process   • dopamine metabolic process   • primary metabolic process   • catechol-containing compound metabolic process   • regulation of primary metabolic process   • amine metabolic process   • catecholamine metabolic process   • phenol-containing compound metabolic process   • metabolic process   • regulation of catecholamine metabolic process   • regulation of metabolic process   • biogenic amine metabolic process   • regulation of dopamine metabolic process   • adult behavior   • regulation of tube diameter   • system process   • regulation of tube size   • regulation of system process   • circulatory system process   • regulation of blood circulation   • regulation of vasoconstriction   • vascular process in circulatory system   • regulation of multicellular organismal process   • blood vessel diameter maintenance   • regulation of biological quality   • blood circulation   • vasoconstriction   • regulation of anatomical structure size   • cell-cell signaling   • gamma-aminobutyric acid signaling pathway   • regulation of behavior   • serotonin metabolic process   • indole-containing compound metabolic process   • cellular response to nitrogen compound   • response to dopamine   • serotonin receptor signaling pathway   • cellular response to dopamine   • response to monoamine   • response to oxygen-containing compound   • response to nitrogen compound   • cellular response to oxygen-containing compound   • cellular response to chemical stimulus   • response to catecholamine   • cellular response to monoamine stimulus   • response to chemical   • cellular response to catecholamine stimulus   • cell population proliferation   • positive regulation of cell population proliferation   • regulation of cell population proliferation   • positive regulation of biological process   • positive regulation of cellular process   • regulation of localization   • regulation of hormone secretion   • transport   • hormone secretion   • localization   • regulation of secretion by cell   • secretion by cell   • signal release   • regulation of signaling   • regulation of transport   • secretion   • regulation of hormone levels   • export from cell   • establishment of localization   • regulation of secretion   • regulation of cell communication   • hormone transport   • monoamine transport   • nitrogen compound transport   • organic hydroxy compound transport   • monoatomic ion transport   • serotonin secretion   • regulation of monoatomic ion transport   • regulation of serotonin secretion   • serotonin transport   • trans-synaptic signaling   • synaptic signaling   • anterograde trans-synaptic signaling   • chemical synaptic transmission   • behavioral defense response   • fear response   • behavioral fear response   • defense response   • response to stress   • multicellular organismal response to stress   • G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger   • electron transport chain   • generation of precursor metabolites and energy   • cell periphery   • cellular anatomical structure   • plasma membrane   • membrane   • somatodendritic compartment   • cell projection   • dendrite   • dendritic tree   • neuron projection   • plasma membrane bounded cell projection   • synapse   • cell junction   • periplasmic space   • protein binding   • binding   • G-protein beta-subunit binding   • fibroblast proliferation   • adenylate cyclase-activating dopamine receptor signaling pathway   • G protein-coupled dopamine receptor signaling pathway   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • response to ketone   • response to prostaglandin   • response to lipid   • response to endogenous stimulus   • response to alcohol   • cellular response to prostaglandin stimulus   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to alcohol   • response to hormone   • cellular response to lipid   • response to prostaglandin E   • cellular response to ketone   • cellular response to hormone stimulus   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cytoplasmic side of plasma membrane   • GTPase complex   • extrinsic component of membrane   • extrinsic component of cytoplasmic side of plasma membrane   • extracellular exosome   • membrane-bounded organelle   • extracellular vesicle   • extracellular organelle   • extracellular region   • organelle   • extracellular space   • vesicle   • extracellular membrane-bounded organelle   • enzyme binding   • GTPase binding   • protein-containing complex binding   • pyrophosphatase activity   • GTPase activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • signaling receptor complex adaptor activity   • protein-macromolecule adaptor activity   • molecular adaptor activity   • signaling adaptor activity   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of taste   • developmental process   • sensory organ development   • eye development   • animal organ development   • retina development in camera-type eye   • visual system development   • multicellular organism development   • camera-type eye development   • anatomical structure development   • sensory system development   • system development   • small GTPase-mediated signal transduction   • Ras protein signal transduction   • intracellular signal transduction   • intracellular signaling cassette   • phospholipase C-activating G protein-coupled receptor signaling pathway   • cellular response to acetylcholine   • acetylcholine receptor signaling pathway   • postsynaptic signal transduction   • G protein-coupled acetylcholine receptor signaling pathway   • response to acetylcholine   • non-motile cilium   • 9+0 non-motile cilium   • cilium   • photoreceptor disc membrane   • photoreceptor outer segment   • photoreceptor cell cilium   • organelle membrane   • intracellular anatomical structure   • cytoplasm   • cytosol   • vacuolar membrane   • lytic vacuole   • vacuole   • intracellular membrane-bounded organelle   • intracellular organelle   • lytic vacuole membrane   • bounding membrane of organelle   • lysosomal membrane   • lysosome   • mu-type opioid receptor binding   • signaling receptor binding   • G protein-coupled receptor binding   • opioid receptor binding   • guanyl nucleotide binding   • GTP binding   • nucleotide binding   • guanyl ribonucleotide binding   • purine ribonucleotide binding   • purine ribonucleoside triphosphate binding   • nucleoside phosphate binding   • ion binding   • purine nucleotide binding   • anion binding   • heterocyclic compound binding   • carbohydrate derivative binding   • ribonucleotide binding   • small molecule binding   • peptide hormone receptor binding   • corticotropin-releasing hormone receptor binding   • corticotropin-releasing hormone receptor 1 binding   • hormone receptor binding   • neuropeptide receptor binding   • G protein-coupled serotonin receptor binding   • G-protein beta/gamma-subunit complex binding   • G protein activity   • molecular function regulator activity   • cation binding   • metal ion binding   • heart process   • regulation of heart contraction   • heart contraction   • locomotory behavior   • membrane docking   • vesicle-mediated transport   • organelle localization by membrane tethering   • exocytosis   • organelle localization   • vesicle docking   • exocytic process   • vesicle docking involved in exocytosis   • negative regulation of protein transport   • establishment of protein localization   • negative regulation of biological process   • negative regulation of transport   • negative regulation of secretion   • negative regulation of hormone secretion   • negative regulation of secretion by cell   • intracellular protein localization   • regulation of peptide hormone secretion   • negative regulation of peptide hormone secretion   • establishment of protein localization to extracellular region   • negative regulation of establishment of protein localization   • protein secretion   • regulation of protein secretion   • negative regulation of protein secretion   • regulation of protein localization   • regulation of peptide secretion   • negative regulation of signaling   • negative regulation of cell communication   • protein localization to extracellular region   • negative regulation of peptide secretion   • peptide secretion   • negative regulation of cellular process   • negative regulation of protein localization   • regulation of peptide transport   • regulation of establishment of protein localization   • regulation of protein transport   • peptide transport   • negative regulation of insulin secretion   • protein transport   • regulation of insulin secretion   • peptide hormone secretion   • macromolecule localization   • insulin secretion   • modulation of chemical synaptic transmission   • regulation of trans-synaptic signaling   • postsynaptic modulation of chemical synaptic transmission   • muscle contraction   • muscle system process   • postsynapse   • postsynaptic membrane   • plasma membrane region   • synaptic membrane   • parallel fiber to Purkinje cell synapse   • excitatory synapse   • presynapse   • presynaptic membrane   • GABA-ergic synapse   • glutamatergic synapse   • cell body
Gene OntologyCellular Component
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
Code_L_
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
Code_L_
Name
Synonyms
Identifier
Formula
Molecular Weight
SMILES
PubChem
Formal Charge
Total Atoms
Total Chiral Atoms
Total Bonds
Total Aromatic Bonds

CodeJ40
PDB ResiduesW:W:?1
Environment DetailsOpen EMBL-EBI Page
CodeJ40
Name[(2R)-1-[oxidanyl-[(2R,3R,5S,6R)-2,3,5,6-tetrakis(oxidanyl)-4-phosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-3-tetradecanoyloxy-propan-2-yl] (5E,8E)-hexadeca-5,8,11,14-tetraenoate
Synonyms
Identifier
FormulaC39 H68 O16 P2
Molecular Weight854.895
SMILES
PubChem
Formal Charge0
Total Atoms125
Total Chiral Atoms5
Total Bonds125
Total Aromatic Bonds0

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP08908
Sequence
>9DYD_nogp_Chain_R
YQVITSLLL GTLIFCAVL GNACVVAAI ALERSLQNV ANYLIGSLA 
VTDLMVSVL VLPMAALYQ VLNKWTLGQ VTCDLFIAL DVLCCTSSI 
HLCAIALDR YWAITDPID YVNKRTPRR AAALISLTW LIGFLISIP 
PMLGWRTPE DRSDPDACT ISKDHGYTI YSTFGAFYI PLLLMLVLY 
GRIFRAARF RIRKKNERN AEAKRKMAL ARERKTVKT LGIIMGTFI 
LCWLPFFIV ALVLPFCES SCHMPTLLG AIINWLGYS NSLLNPVIY 
AYFNKDFQN AFKKIIW


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
7E2XAAmine5-Hydroxytryptamine5-HT1AHomo sapiens-PtdIns4PGi1/β1/γ232021-04-14doi.org/10.1038/s41586-021-03376-8
7E2X (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiens-PtdIns4P32021-04-14doi.org/10.1038/s41586-021-03376-8
7E2YAAmine5-Hydroxytryptamine5-HT1AHomo sapiensSerotoninPtdIns4PGi1/β1/γ232021-04-14doi.org/10.1038/s41586-021-03376-8
7E2Y (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensSerotoninPtdIns4P32021-04-14doi.org/10.1038/s41586-021-03376-8
7E2ZAAmine5-Hydroxytryptamine5-HT1AHomo sapiensAripiprazolePtdIns4PGi1/β1/γ23.12021-04-14doi.org/10.1038/s41586-021-03376-8
7E2Z (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensAripiprazolePtdIns4P3.12021-04-14doi.org/10.1038/s41586-021-03376-8
8JSPAAmine5-Hydroxytryptamine5-HT1AHomo sapiensUlotaront-Gi1/β1/γ23.652023-11-15doi.org/10.1038/s41586-023-06804-z
8JSP (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensUlotaront-3.652023-11-15doi.org/10.1038/s41586-023-06804-z
8W8BAAmine5-Hydroxytryptamine5-HT1AHomo sapiensSEP-363856-Gi1/β1/γ232023-11-22doi.org/10.1038/s41586-023-06775-1
8W8B (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensSEP-363856-32023-11-22doi.org/10.1038/s41586-023-06775-1
8FY8AAmine5-Hydroxytryptamine5-HT1AHomo sapiens5-MeO-DMTPtdIns4PGi1/β1/γ12.792024-05-15doi.org/10.1038/s41586-024-07403-2
8FY8 (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiens5-MeO-DMTPtdIns4P2.792024-05-15doi.org/10.1038/s41586-024-07403-2
8FYEAAmine5-Hydroxytryptamine5-HT1AHomo sapiens4-F,5-MeO-PyrTPtdIns4PGi1/β1/γ12.852024-05-15doi.org/10.1038/s41586-024-07403-2
8FYE (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiens4-F,5-MeO-PyrTPtdIns4P2.852024-05-15doi.org/10.1038/s41586-024-07403-2
8FYLAAmine5-Hydroxytryptamine5-HT1AHomo sapiensVilazodonePtdIns4PGi1/β1/γ12.942024-05-15doi.org/10.1038/s41586-024-07403-2
8FYL (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensVilazodonePtdIns4P2.942024-05-15doi.org/10.1038/s41586-024-07403-2
8FYTAAmine5-Hydroxytryptamine5-HT1AHomo sapiensLSDPtdIns4PGi1/β1/γ12.642024-05-15doi.org/10.1038/s41586-024-07403-2
8FYT (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensLSDPtdIns4P2.642024-05-15doi.org/10.1038/s41586-024-07403-2
8FYXAAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspironePtdIns4PGi1/β1/γ12.722024-05-15doi.org/10.1038/s41586-024-07403-2
8FYX (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspironePtdIns4P2.722024-05-15doi.org/10.1038/s41586-024-07403-2
8PJKAAmine5-Hydroxytryptamine5-HT1AHomo sapiensST171-Gi1/β1/γ12.42024-05-29doi.org/10.1126/sciadv.adv9267
8PJK (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensST171-2.42024-05-29doi.org/10.1126/sciadv.adv9267
8PKMAAmine5-Hydroxytryptamine5-HT1AHomo sapiensBefiradol-Gi1/β1/γ12.92024-05-29doi.org/10.1126/sciadv.adv9267
8PKM (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBefiradol-2.92024-05-29doi.org/10.1126/sciadv.adv9267
8JT6AAmine5-Hydroxytryptamine5-HT1AHomo sapiens(R)-IHCH-7179PtdIns4PGi1/β1/γ232024-02-28doi.org/10.1016/j.cell.2024.02.034
8JT6 (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiens(R)-IHCH-7179PtdIns4P32024-02-28doi.org/10.1016/j.cell.2024.02.034
9GL2AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBefiradol-Gs/β1/γ23.22025-07-02doi.org/10.1126/sciadv.adv9267
9GL2 (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBefiradol-3.22025-07-02doi.org/10.1126/sciadv.adv9267
9DYDAAmine5-Hydroxytryptamine5-HT1AHomo sapiensAsenapinePtdIns4PGo/β1/γ22.962025-08-13doi.org/10.1126/sciadv.adu9851
9DYD (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensAsenapinePtdIns4P2.962025-08-13doi.org/10.1126/sciadv.adu9851
9DYEAAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspironePtdIns4PGo/β1/γ22.92025-08-13doi.org/10.1126/sciadv.adu9851
9DYE (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspironePtdIns4P2.92025-08-13doi.org/10.1126/sciadv.adu9851
9DYFAAmine5-Hydroxytryptamine5-HT1AHomo sapiensAsenapinePtdIns4PGi1/β1/γ22.742025-08-13doi.org/10.1126/sciadv.adu9851
9DYF (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensAsenapinePtdIns4P2.742025-08-13doi.org/10.1126/sciadv.adu9851
9MD1AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspironePtdIns4PGz/β1/γ23.032025-08-13doi.org/10.1126/sciadv.adu9851
9MD1 (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspironePtdIns4P3.032025-08-13doi.org/10.1126/sciadv.adu9851
9VJ5AAmine5-Hydroxytryptamine5-HT1AHomo sapiensGepirone-Go/β1/γ22.692025-11-12To be published
9VJ5 (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensGepirone-2.692025-11-12To be published
9VJ6AAmine5-Hydroxytryptamine5-HT1AHomo sapiensF-15599-Gi3/β1/γ22.622025-11-12To be published
9VJ6 (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensF-15599-2.622025-11-12To be published
9VJEAAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspirone-Go/β1/γ22.472025-11-12To be published
9VJE (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspirone-2.472025-11-12To be published
9VJFAAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspirone-Gi3/β1/γ22.72025-11-12To be published
9VJF (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspirone-2.72025-11-12To be published
9VJGAAmine5-Hydroxytryptamine5-HT1AHomo sapiens8-OH-DPAT-chim(NtGi2-Gz)/β1/γ22.672025-11-12To be published
9VJG (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiens8-OH-DPAT-2.672025-11-12To be published
9VMYAAmine5-Hydroxytryptamine5-HT1AHomo sapiensTMU4142-Go/β1/γ22.862025-11-12To be published
9VMY (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensTMU4142-2.862025-11-12To be published
9VNFAAmine5-Hydroxytryptamine5-HT1AHomo sapiensPindolol-Go/β1/γ22.742025-11-12To be published
9VNF (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensPindolol-2.742025-11-12To be published
9KVGAAmine5-Hydroxytryptamine5-HT1AHomo sapiens5-MeO-DMTPtdIns4PGi1/β1/γ22.632025-12-03To be published
9KVG (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiens5-MeO-DMTPtdIns4P2.632025-12-03To be published
9KVHAAmine5-Hydroxytryptamine5-HT1AHomo sapiensCinobufoteninePtdIns4PGi1/β1/γ22.592025-12-03To be published
9KVH (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensCinobufoteninePtdIns4P2.592025-12-03To be published
9KVIAAmine5-Hydroxytryptamine5-HT1AHomo sapiensBufoteninPtdIns4PGi1/β1/γ22.542025-12-03To be published
9KVI (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBufoteninPtdIns4P2.542025-12-03To be published
9HYIAAmine5-Hydroxytryptamine5-HT1AHomo sapiensDP81-Gi1/β1/γ22.32026-01-21To be published
9HYI (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensDP81-2.32026-01-21To be published




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 9DYD_nogp.zip



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