Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:?1 9.85778910
2R:R:V57 4.05429
3R:R:E64 5.1775447
4R:R:L67 4.368528
5R:R:V70 7.1725457
6R:R:N72 6.2825429
7R:R:L78 7.12619
8R:R:D82 6.652519
9R:R:W102 9.11619
10R:R:D116 11.1775418
11R:R:W125 11.8925417
12R:R:H126 7.92571718
13R:R:L127 6.7625418
14R:R:Y135 8.37509
15R:R:R148 11.8325458
16R:R:W161 8.992519
17R:R:P170 6.038538
18R:R:W175 5.9025436
19R:R:Y195 7.02333638
20R:R:Y198 5.8175435
21R:R:F204 11.026518
22R:R:P207 7.03419
23R:R:L208 5.51417
24R:R:Y215 5.87833609
25R:R:F219 3.815406
26R:R:F354 5.57619
27R:R:I355 4.72407
28R:R:W358 7.76718
29R:R:L359 6.5725407
30R:R:F361 9.254518
31R:R:F362 11.292517
32R:R:M377 4.238564
33R:R:W387 7.616518
34R:R:Y390 8.235618
35R:R:N396 9.16519
36R:R:I399 5.38408
37R:R:Y400 5.81714719
38R:R:Y402 4.846506
39R:R:F407 6.87143728
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:?1 R:R:Y390 25.131610.73YesYes108
2R:R:W387 R:R:Y390 23.30638.68YesYes188
3R:R:L43 R:R:W387 17.30917.08NoYes078
4R:R:L43 R:R:T39 14.87242.95NoNo075
5L:L:?1 R:R:C120 33.28575.19YesNo107
6R:R:C120 R:R:W358 39.44445.22NoYes178
7R:R:N392 R:R:W358 53.55149.04NoYes098
8R:R:N392 R:R:N396 52.735512.26NoYes099
9R:R:D82 R:R:N396 48.95798.08YesYes199
10R:R:D82 R:R:S393 13.22214.42YesNo099
11L:L:?1 R:R:F361 33.444716.72YesYes108
12R:R:F361 R:R:W358 33.79478.02YesYes188
13L:L:?1 R:R:F362 61.60327.96YesYes107
14R:R:F362 R:R:W358 33.78619.02YesYes178
15R:R:D82 R:R:N54 51.93566.73YesNo099
16R:R:N54 R:R:P397 48.92599.77NoNo099
17R:R:P397 R:R:Y402 47.91772.78NoYes096
18R:R:V57 R:R:Y402 23.57373.79YesYes096
19R:R:F407 R:R:V57 17.24613.93YesYes289
20R:R:F411 R:R:Y402 19.28969.28NoYes086
21R:R:F407 R:R:F411 17.18945.36YesNo088
22R:R:F407 R:R:L67 19.39936.09YesYes288
23R:R:A410 R:R:L67 12.98423.15NoYes088
24R:R:A410 R:R:E64 10.82614.53NoYes087
25R:R:F354 R:R:W358 47.33234.01YesYes198
26R:R:F354 R:R:M211 43.32926.22YesNo099
27R:R:M211 R:R:M351 41.87245.78NoNo098
28R:R:M351 R:R:Y215 52.59383.59NoYes089
29R:R:I218 R:R:Y215 54.16763.63NoYes099
30R:R:I218 R:R:Y135 52.70353.63NoYes099
31R:R:W136 R:R:Y135 37.89273.86NoYes059
32R:R:R152 R:R:W136 34.9686NoNo075
33R:R:R148 R:R:R152 23.01545.33YesNo087
34R:R:R148 R:R:V70 12.303915.69YesYes587
35R:R:F204 R:R:F362 28.35720.36YesYes187
36R:R:F204 R:R:F354 18.55019.65YesYes189
37R:R:F204 R:R:L208 11.42398.53YesYes187
38R:R:L208 R:R:L212 11.75914.15YesNo076
39R:R:L212 R:R:M351 11.43014.24NoNo068
40R:R:F354 R:R:L127 24.35634.87YesYes198
41R:R:L127 R:R:L78 11.04675.54YesYes189
42R:R:H126 R:R:L78 16.00387.71YesYes189
43R:R:L127 R:R:Y400 10.60317.03YesYes189
44R:R:N396 R:R:Y400 17.04893.49YesYes199
45L:L:?1 R:R:W102 1005.21YesYes109
46R:R:C109 R:R:W102 48.22959.14NoYes199
47R:R:C187 R:R:W102 48.259116.98NoYes199
48R:R:C109 R:R:I113 47.36313.27NoNo197
49R:R:C187 R:R:I113 47.39273.27NoNo197
50R:R:I113 R:R:I189 92.95274.42NoNo076
51R:R:I189 R:R:Y195 65.69383.63NoYes068
52R:R:S190 R:R:Y195 15.30742.54NoYes068
53R:R:R176 R:R:S190 13.4027.91NoNo066
54R:R:P170 R:R:Y195 24.57574.17YesYes388
55R:R:P170 R:R:Y198 17.05888.34YesYes385
56R:R:I167 R:R:Y198 15.13746.04NoYes085
57R:R:I167 R:R:T121 11.34017.6NoNo088
58R:R:W175 R:R:Y195 20.79327.72YesYes368
59R:R:W175 R:R:Y198 17.02687.72YesYes365
60R:R:R134 R:R:Y400 11.07396.17NoYes199
61R:R:D143 R:R:R152 10.807611.91NoNo067
62R:R:L166 R:R:Y198 15.20271.17NoYes055
63R:R:L162 R:R:L166 11.40545.54NoNo055
64R:R:I189 R:R:K191 26.69194.36NoNo065
65R:R:K191 R:R:P369 22.90825.02NoNo057
66R:R:P369 R:R:T196 21.012612.24NoNo077
67R:R:F370 R:R:T196 19.11463.89NoNo057
68R:R:F370 R:R:H193 15.311118.1NoNo054
69R:R:G194 R:R:H193 11.49781.59NoNo054
70R:R:L347 R:R:Y215 19.86764.69NoYes089
71R:R:I350 R:R:Y400 14.29194.84NoYes089
72R:R:F219 R:R:L347 15.29763.65YesNo068
73R:R:F219 R:R:R223 10.70537.48YesNo067
74R:R:I399 R:R:Y400 11.97367.25YesYes089
75R:R:D82 R:R:L78 16.68548.14YesYes199
76R:R:R134 R:R:Y215 14.43738.23NoYes099
77R:R:L78 R:R:Y400 10.59944.69YesYes199
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:?1 R:R:Y96 9.2 1 Yes No 0 6 0 1
L:L:?1 R:R:W102 5.21 1 Yes Yes 0 9 0 1
L:L:?1 R:R:D116 16.86 1 Yes Yes 0 8 0 1
L:L:?1 R:R:V117 8.77 1 Yes No 0 8 0 1
L:L:?1 R:R:C120 5.19 1 Yes No 0 7 0 1
L:L:?1 R:R:F361 16.72 1 Yes Yes 0 8 0 1
L:L:?1 R:R:F362 7.96 1 Yes Yes 0 7 0 1
L:L:?1 R:R:N386 8.08 1 Yes No 0 7 0 1
L:L:?1 R:R:Y390 10.73 1 Yes Yes 0 8 0 1
R:R:D116 R:R:V89 11.69 1 Yes No 8 8 1 2
R:R:V89 R:R:Y390 3.79 1 No Yes 8 8 2 1
R:R:L90 R:R:W387 4.56 1 No Yes 8 8 2 2
R:R:L90 R:R:Y390 9.38 1 No Yes 8 8 2 1
R:R:A93 R:R:Y390 5.34 0 No Yes 7 8 2 1
R:R:W102 R:R:Y96 5.79 1 Yes No 9 6 1 1
R:R:L104 R:R:W102 12.53 0 No Yes 7 9 2 1
R:R:C109 R:R:W102 9.14 1 No Yes 9 9 2 1
R:R:F112 R:R:W102 5.01 0 No Yes 6 9 2 1
R:R:C187 R:R:W102 16.98 1 No Yes 9 9 2 1
R:R:C109 R:R:C187 7.28 1 No No 9 9 2 2
R:R:C120 R:R:D116 4.67 1 No Yes 7 8 1 1
R:R:D116 R:R:Y390 11.49 1 Yes Yes 8 8 1 1
R:R:C120 R:R:W358 5.22 1 No Yes 7 8 1 2
R:R:F362 R:R:T200 5.19 1 Yes No 7 7 1 2
R:R:F204 R:R:F362 20.36 1 Yes Yes 8 7 2 1
R:R:F361 R:R:W358 8.02 1 Yes Yes 8 8 1 2
R:R:F362 R:R:W358 9.02 1 Yes Yes 7 8 1 2
R:R:F361 R:R:F362 13.93 1 Yes Yes 8 7 1 1
R:R:F361 R:R:N386 4.83 1 Yes No 8 7 1 1
R:R:W387 R:R:Y390 8.68 1 Yes Yes 8 8 2 1
R:R:S168 R:R:V117 3.23 0 No No 8 8 2 1
R:R:A365 R:R:F361 2.77 0 No Yes 8 8 2 1
R:R:A186 R:R:Y96 1.33 0 No No 4 6 2 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 8FYX_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3.27
Number of Linked Nodes 269
Number of Links 310
Number of Hubs 39
Number of Links mediated by Hubs 155
Number of Communities 6
Number of Nodes involved in Communities 58
Number of Links involved in Communities 86
Path Summary
Number Of Nodes in MetaPath 78
Number Of Links MetaPath 77
Number of Shortest Paths 151840
Length Of Smallest Path 3
Average Path Length 15.7266
Length of Longest Path 31
Minimum Path Strength 1.225
Average Path Strength 6.55253
Maximum Path Strength 19.355
Minimum Path Correlation 0.7
Average Path Correlation 0.939108
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 5
Average % Of Corr. Nodes 50.3675
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 47.6608
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function• D2 dopamine receptor binding   • protein binding   • binding   • signaling receptor binding   • G protein-coupled receptor binding   • dopamine receptor binding   • phosphorus-oxygen lyase activity   • enzyme regulator activity   • cyclase regulator activity   • molecular function regulator activity   • cyclase activity   • adenylate cyclase regulator activity   • lyase activity   • catalytic activity   • adenylate cyclase activity   • guanyl nucleotide binding   • GTP binding   • nucleotide binding   • guanyl ribonucleotide binding   • purine ribonucleotide binding   • purine ribonucleoside triphosphate binding   • nucleoside phosphate binding   • ion binding   • purine nucleotide binding   • anion binding   • heterocyclic compound binding   • carbohydrate derivative binding   • ribonucleotide binding   • small molecule binding   • cation binding   • magnesium ion binding   • metal ion binding   • GDP binding   • G protein-coupled serotonin receptor binding   • protein-containing complex binding   • G-protein beta/gamma-subunit complex binding   • pyrophosphatase activity   • GTPase activity   • G protein activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • cell communication   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction
Gene OntologyBiological Process• cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • cell communication   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction   • response to hormone   • response to chemical   • response to endogenous stimulus   • response to peptide hormone   • response to oxygen-containing compound   • response to nitrogen compound   • cell division   • leukocyte migration   • immune system process   • mononuclear cell migration   • lymphocyte migration   • cell migration   • T cell migration   • cell motility   • regulation of steroid biosynthetic process   • regulation of cholesterol biosynthetic process   • regulation of cholesterol metabolic process   • steroid metabolic process   • regulation of lipid metabolic process   • sterol metabolic process   • positive regulation of biological process   • cholesterol metabolic process   • lipid biosynthetic process   • alcohol metabolic process   • regulation of primary metabolic process   • positive regulation of metabolic process   • regulation of small molecule metabolic process   • positive regulation of biosynthetic process   • positive regulation of lipid metabolic process   • small molecule metabolic process   • steroid biosynthetic process   • positive regulation of cellular process   • regulation of biosynthetic process   • secondary alcohol biosynthetic process   • regulation of alcohol biosynthetic process   • small molecule biosynthetic process   • regulation of steroid metabolic process   • cholesterol biosynthetic process   • positive regulation of cholesterol biosynthetic process   • primary metabolic process   • secondary alcohol metabolic process   • positive regulation of steroid biosynthetic process   • biosynthetic process   • sterol biosynthetic process   • positive regulation of lipid biosynthetic process   • regulation of sterol biosynthetic process   • alcohol biosynthetic process   • positive regulation of cholesterol metabolic process   • positive regulation of steroid metabolic process   • metabolic process   • regulation of lipid biosynthetic process   • positive regulation of small molecule metabolic process   • regulation of metabolic process   • positive regulation of alcohol biosynthetic process   • positive regulation of sterol biosynthetic process   • lipid metabolic process   • regulation of cytoskeleton organization   • regulation of cellular component organization   • microtubule cytoskeleton organization   • regulation of mitotic spindle organization   • mitotic cell cycle   • cellular component organization   • cell cycle   • cellular component organization or biogenesis   • regulation of cell cycle   • microtubule cytoskeleton organization involved in mitosis   • spindle organization   • cell cycle process   • regulation of cell cycle process   • regulation of microtubule-based process   • regulation of spindle organization   • regulation of organelle organization   • mitotic spindle organization   • organelle organization   • mitotic cell cycle process   • microtubule-based process   • cytoskeleton organization   • regulation of microtubule cytoskeleton organization   • protein localization   • positive regulation of protein localization to cell periphery   • regulation of localization   • protein localization to cell periphery   • cellular localization   • regulation of protein localization   • positive regulation of protein localization to cell cortex   • regulation of protein localization to cell periphery   • localization   • regulation of cellular localization   • regulation of protein localization to cell cortex   • cellular macromolecule localization   • macromolecule localization   • positive regulation of protein localization   • protein localization to cell cortex   • response to ketone   • response to prostaglandin   • response to lipid   • response to alcohol   • response to prostaglandin E   • cellular response to forskolin   • cellular response to oxygen-containing compound   • cellular response to chemical stimulus   • cellular response to alcohol   • response to forskolin   • cellular response to lipid   • cellular response to ketone   • midbody   • cellular anatomical structure   • membrane-bounded organelle   • intracellular anatomical structure   • nucleus   • membrane-enclosed lumen   • intracellular membraneless organelle   • intracellular membrane-bounded organelle   • nucleolus   • intracellular organelle lumen   • intracellular organelle   • organelle lumen   • organelle   • membraneless organelle
Gene OntologyCellular Component• midbody   • cellular anatomical structure   • membrane-bounded organelle   • intracellular anatomical structure   • nucleus   • membrane-enclosed lumen   • intracellular membraneless organelle   • intracellular membrane-bounded organelle   • nucleolus   • intracellular organelle lumen   • intracellular organelle   • organelle lumen   • organelle   • membraneless organelle   • nuclear lumen   • cell periphery   • cell cortex   • cytoplasm   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • membrane   • plasma membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cytoplasmic side of plasma membrane   • GTPase complex   • extrinsic component of membrane   • extrinsic component of cytoplasmic side of plasma membrane   • extracellular exosome   • extracellular vesicle   • extracellular organelle   • extracellular region   • extracellular space   • vesicle   • extracellular membrane-bounded organelle   • centrosome   • microtubule organizing center   • cytoskeleton   • microtubule cytoskeleton   • centriolar satellite   • cytosol   • nucleoplasm   • vacuolar membrane   • lytic vacuole   • vacuole   • lytic vacuole membrane   • bounding membrane of organelle   • lysosomal membrane   • organelle membrane   • lysosome   • Golgi apparatus   • endomembrane system   • cilium   • plasma membrane bounded cell projection   • ciliary basal body   • cell projection   • protein binding   • binding   • enzyme binding   • GTPase binding   • protein-containing complex binding   • pyrophosphatase activity   • GTPase activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • signaling receptor complex adaptor activity   • protein-macromolecule adaptor activity   • molecular adaptor activity   • signaling adaptor activity   • multicellular organismal process   • system process   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of taste   • developmental process   • sensory organ development   • eye development   • animal organ development   • retina development in camera-type eye   • visual system development   • multicellular organism development   • camera-type eye development   • anatomical structure development   • sensory system development   • system development   • cell population proliferation   • cellular process   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • signal transduction   • cell communication   • response to ketone   • response to prostaglandin   • response to lipid   • response to endogenous stimulus   • response to alcohol   • cellular response to prostaglandin stimulus   • response to oxygen-containing compound   • cellular response to oxygen-containing compound   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to chemical stimulus   • cellular response to alcohol   • response to hormone   • response to chemical   • cellular response to lipid   • response to prostaglandin E   • cellular response to ketone   • cellular response to hormone stimulus   • small GTPase-mediated signal transduction   • Ras protein signal transduction   • intracellular signal transduction   • intracellular signaling cassette   • phospholipase C-activating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular response to nitrogen compound   • response to dopamine   • cellular response to dopamine   • response to monoamine   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • G protein-coupled dopamine receptor signaling pathway   • response to nitrogen compound   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cellular response to monoamine stimulus   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • synaptic signaling   • cellular response to acetylcholine   • cell-cell signaling   • acetylcholine receptor signaling pathway   • postsynaptic signal transduction   • G protein-coupled acetylcholine receptor signaling pathway   • response to acetylcholine   • non-motile cilium   • 9+0 non-motile cilium   • neuron projection   • photoreceptor disc membrane   • photoreceptor outer segment   • photoreceptor cell cilium   • synapse   • cell junction   • G-protein beta-subunit binding   • fibroblast proliferation   • tetrapyrrole binding   • heme binding   • electron transfer activity   • cation binding   • transition metal ion binding   • iron ion binding   • ion binding   • metal ion binding   • small molecule binding   • serotonin binding   • amine binding   • heterocyclic compound binding   • G protein-coupled amine receptor activity   • G protein-coupled serotonin receptor activity   • molecular transducer activity   • G protein-coupled receptor activity   • transmembrane signaling receptor activity   • signaling receptor activity   • Gi/o-coupled serotonin receptor activity   • neurotransmitter receptor activity   • serotonin receptor activity   • signaling receptor binding   • receptor-receptor interaction   • electron transport chain   • metabolic process   • generation of precursor metabolites and energy   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • behavior   • exploration behavior   • regulation of amine metabolic process   • dopamine metabolic process   • primary metabolic process   • catechol-containing compound metabolic process   • regulation of primary metabolic process   • amine metabolic process   • catecholamine metabolic process   • phenol-containing compound metabolic process   • regulation of catecholamine metabolic process   • regulation of metabolic process   • biogenic amine metabolic process   • regulation of dopamine metabolic process   • regulation of tube diameter   • regulation of tube size   • regulation of system process   • circulatory system process   • regulation of blood circulation   • regulation of vasoconstriction   • vascular process in circulatory system   • regulation of multicellular organismal process   • blood vessel diameter maintenance   • regulation of biological quality   • blood circulation   • vasoconstriction   • regulation of anatomical structure size   • gamma-aminobutyric acid signaling pathway   • regulation of behavior   • ammonium ion metabolic process   • serotonin metabolic process   • indole-containing compound metabolic process   • primary amino compound metabolic process   • serotonin receptor signaling pathway   • positive regulation of cell population proliferation   • regulation of cell population proliferation   • positive regulation of biological process   • positive regulation of cellular process   • regulation of localization   • regulation of hormone secretion   • transport   • hormone secretion   • localization   • regulation of secretion by cell   • secretion by cell   • signal release   • regulation of signaling   • regulation of transport   • secretion   • regulation of hormone levels   • export from cell   • establishment of localization   • regulation of secretion   • regulation of cell communication   • hormone transport   • monoamine transport   • nitrogen compound transport   • organic hydroxy compound transport   • monoatomic ion transport   • serotonin secretion   • regulation of monoatomic ion transport   • regulation of serotonin secretion   • serotonin transport   • trans-synaptic signaling   • anterograde trans-synaptic signaling   • chemical synaptic transmission   • behavioral defense response   • fear response   • behavioral fear response   • defense response   • response to stress   • multicellular organismal response to stress   • G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger   • periplasmic space   • somatodendritic compartment   • dendrite   • dendritic tree
SCOP2Domain Identifier• Ras-like P-loop GTPases   • Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• Ras-like P-loop GTPases   • Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeYLX
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodeYLX
NameBuspirone
SynonymsBuspironum
Identifier
FormulaC21 H31 N5 O2
Molecular Weight385.503
SMILES
PubChem2477
Formal Charge0
Total Atoms59
Total Chiral Atoms0
Total Bonds62
Total Aromatic Bonds6

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP08908
Sequence
>8FYX_nogp_Chain_R
YQVITSLLL GTLIFCAVL GNACVVAAI ALERSLQNV ANYLIGSLA 
VTDLMVSVL VLPMAALYQ VLNKWTLGQ VTCDLFIAL DVLCCTSSI 
WHLCAIALD RYWAITDPI DYVNKRTPR RAAALISLT WLIGFLISI 
PPMLGWRTP EDRSDPDAC TISKDHGYT IYSTFGAFY IPLLLMLVL 
YGRIFRAAR FRIRKKNER NAEAKRKMA LARERKTVK TLGIIMGTF 
ILCWLPFFI VALVLPFCE SSCHMPTLL GAIINWLGY SNSLLNPVI 
YAYFNKDFQ NAFKKII


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
8PKMAAmine5-Hydroxytryptamine5-HT1AHomo sapiensBefiradolt7mGi1/β1/γ12.92024-05-29To be published
8PKM (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBefiradolt7m2.92024-05-29To be published
8PJKAAmine5-Hydroxytryptamine5-HT1AHomo sapiensST171t7mGi1/β1/γ12.42024-05-29To be published
8PJK (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensST171t7m2.42024-05-29To be published
8FYXAAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspirone-Gi1/β1/γ12.722024-05-1510.1038/s41586-024-07403-2
8FYX (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspirone-2.722024-05-1510.1038/s41586-024-07403-2
8FYTAAmine5-Hydroxytryptamine5-HT1AHomo sapiensLSD-Gi1/β1/γ12.642024-05-1510.1038/s41586-024-07403-2
8FYT (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensLSD-2.642024-05-1510.1038/s41586-024-07403-2
8FYLAAmine5-Hydroxytryptamine5-HT1AHomo sapiensVilazodone-Gi1/β1/γ12.942024-05-1510.1038/s41586-024-07403-2
8FYL (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensVilazodone-2.942024-05-1510.1038/s41586-024-07403-2
8FYEAAmine5-Hydroxytryptamine5-HT1AHomo sapiens4-F,5-MeO-PyrT-Gi1/β1/γ12.852024-05-1510.1038/s41586-024-07403-2
8FYE (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiens4-F,5-MeO-PyrT-2.852024-05-1510.1038/s41586-024-07403-2
8FY8AAmine5-Hydroxytryptamine5-HT1AHomo sapiens5-MeO-DMT-Gi1/β1/γ12.792024-05-1510.1038/s41586-024-07403-2
8FY8 (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiens5-MeO-DMT-2.792024-05-1510.1038/s41586-024-07403-2
8JT6AAmine5-Hydroxytryptamine5-HT1AHomo sapiens(R)-IHCH-7179-Gi1/β1/γ232024-02-28To be published
8JT6 (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiens(R)-IHCH-7179-32024-02-28To be published
8W8BAAmine5-Hydroxytryptamine5-HT1AHomo sapiensSEP-363856-Gi1/β1/γ232023-11-2210.1038/s41586-023-06775-1
8W8B (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensSEP-363856-32023-11-2210.1038/s41586-023-06775-1
8JSPAAmine5-Hydroxytryptamine5-HT1AHomo sapiensUlotaront-Gi1/β1/γ23.652023-11-1510.1038/s41586-023-06804-z
8JSP (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensUlotaront-3.652023-11-1510.1038/s41586-023-06804-z
7E2ZAAmine5-Hydroxytryptamine5-HT1AHomo sapiensAripiprazole-Gi1/β1/γ23.12021-04-1410.1038/s41586-021-03376-8
7E2Z (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensAripiprazole-3.12021-04-1410.1038/s41586-021-03376-8
7E2YAAmine5-Hydroxytryptamine5-HT1AHomo sapiensSerotonin-Gi1/β1/γ232021-04-1410.1038/s41586-021-03376-8
7E2Y (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensSerotonin-32021-04-1410.1038/s41586-021-03376-8
7E2XAAmine5-Hydroxytryptamine5-HT1AHomo sapiens--Gi1/β1/γ232021-04-1410.1038/s41586-021-03376-8
7E2X (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiens--32021-04-1410.1038/s41586-021-03376-8




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 8FYX_nogp.zip



You can click to copy the link of this page to easily come back here later

or use this QR code to link and share this page.



You can also  read or  download a guide explaining the meaning of all files and numerical data.