Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:?1 9.404541120
2R:R:E64 8.2525407
3R:R:L67 3.186538
4R:R:N72 7.5425439
5R:R:L74 3.555408
6R:R:D82 5.844519
7R:R:W102 9.828549
8R:R:F112 5.09446
9R:R:T121 3.79408
10R:R:I124 4.3075428
11R:R:H126 7.334518
12R:R:R134 5.1469
13R:R:Y135 8.295409
14R:R:W161 7.8425419
15R:R:C187 7.6275449
16R:R:Y195 7.22608
17R:R:F204 9.4425408
18R:R:Y215 5.622509
19R:R:L347 3.25408
20R:R:W358 7.475628
21R:R:L359 4.535407
22R:R:F361 6.27167628
23R:R:F362 12.52427
24R:R:M377 4.2475404
25R:R:W387 5.1175408
26R:R:Y390 6.3625428
27R:R:N396 7.4925419
28R:R:F407 7.166538
29W:W:?1 7.765391300
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:?1 R:R:Y390 38.29156.9YesYes208
2R:R:W387 R:R:Y390 31.81615.79YesYes088
3R:R:L43 R:R:W387 24.73389.11NoYes078
4R:R:L43 R:R:T39 21.87682.95NoNo075
5L:L:?1 R:R:W358 64.113111.73YesYes208
6R:R:N392 R:R:W358 1006.78NoYes098
7R:R:N392 R:R:N396 99.530512.26NoYes099
8R:R:D82 R:R:N396 12.61886.73YesYes199
9R:R:L127 R:R:N396 96.76515.49NoYes089
10R:R:L127 R:R:Y400 96.12394.69NoNo089
11R:R:R134 R:R:Y400 93.1814.12YesNo699
12R:R:R134 W:W:?1 61.07874.07YesYes090
13R:R:Y402 W:W:?1 15.11517.85NoYes060
14R:R:N404 W:W:?1 22.449313.79NoYes090
15R:R:F407 R:R:N404 21.08110.87YesNo089
16R:R:F407 R:R:L67 12.59023.65YesYes388
17R:R:L78 R:R:N396 27.36175.49NoYes199
18R:R:H126 R:R:L78 27.76823.86YesNo189
19R:R:H126 R:R:I157 19.71265.3YesNo188
20R:R:I157 R:R:L74 18.4532.85NoYes088
21R:R:D133 R:R:L74 14.36514.07NoYes098
22R:R:D133 R:R:R148 12.97959.53NoNo098
23L:L:?1 R:R:V117 10.35739.86YesNo008
24R:R:L118 R:R:W161 10.63214.56NoYes069
25L:L:?1 R:R:I189 35.74957.35YesNo006
26R:R:I189 R:R:Y195 34.73613.63NoYes068
27R:R:P171 R:R:Y195 42.808913.91NoYes078
28R:R:P171 R:R:R176 39.79734.32NoNo076
29R:R:I113 R:R:R176 25.16326.26NoNo076
30R:R:C187 R:R:I113 22.68413.27YesNo097
31L:L:?1 R:R:S199 35.82395.52YesNo008
32R:R:S199 R:R:Y195 34.741812.72NoYes088
33R:R:C187 R:R:W102 10.162614.37YesYes499
34R:R:T39 R:R:V98 14.31923.17NoNo056
35R:R:D180 R:R:R176 12.790613.1NoNo046
36R:R:D180 R:R:R181 10.25425.96NoNo044
37L:L:?1 R:R:I124 12.24674.2YesYes208
38R:R:I124 R:R:P207 13.06543.39YesNo089
39R:R:F354 R:R:I124 14.2623.77NoYes098
40R:R:F354 R:R:L208 12.38413.65NoNo097
41R:R:R134 R:R:Y215 50.70997.2YesYes099
42R:R:I218 R:R:Y215 27.20144.84NoYes099
43R:R:I218 R:R:Y135 25.78154.84NoYes099
44R:R:L214 R:R:Y135 17.02167.03NoYes079
45R:R:L132 R:R:L214 15.52165.54NoNo067
46R:R:L132 R:R:W136 14.01019.11NoNo065
47R:R:R152 R:R:W136 12.48143NoNo075
48R:R:D143 R:R:R152 11.058.34NoNo067
49R:R:S190 R:R:Y195 13.96433.82NoYes068
50R:R:S190 R:R:T177 11.19324.8NoNo065
51L:L:?1 R:R:F362 19.1416.13YesYes207
52R:R:F204 R:R:F362 38.623617.15YesYes087
53R:R:F204 R:R:Y205 34.7598.25YesNo087
54R:R:F201 R:R:Y205 30.5683.09NoNo057
55R:R:F201 R:R:I197 29.14813.77NoNo057
56R:R:F370 R:R:I197 27.71675.02NoNo057
57R:R:F370 R:R:T196 24.81973.89NoNo057
58R:R:P369 R:R:T196 23.35396.99NoNo077
59R:R:L347 R:R:Y215 22.90744.69YesYes089
60R:R:F219 R:R:L347 17.02163.65NoYes068
61R:R:F219 R:R:R223 14.01013.21NoNo067
62R:R:R223 R:R:R227 12.487119.19NoNo076
63R:R:E340 R:R:R227 10.9473.49NoNo086
64R:R:L368 R:R:P369 14.31921.64NoNo047
65R:R:I124 R:R:W358 12.82495.87YesYes288
66R:R:F362 R:R:W358 19.97025.01YesYes278
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:?1 R:R:D116 15.97 2 Yes No 0 8 0 1
L:L:?1 R:R:V117 9.86 2 Yes No 0 8 0 1
L:L:?1 R:R:C120 10.51 2 Yes No 0 7 0 1
L:L:?1 R:R:T121 5.42 2 Yes Yes 0 8 0 1
L:L:?1 R:R:I124 4.2 2 Yes Yes 0 8 0 1
L:L:?1 R:R:I189 7.35 2 Yes No 0 6 0 1
L:L:?1 R:R:S199 5.52 2 Yes No 0 8 0 1
L:L:?1 R:R:W358 11.73 2 Yes Yes 0 8 0 1
L:L:?1 R:R:F361 9.86 2 Yes Yes 0 8 0 1
L:L:?1 R:R:F362 16.13 2 Yes Yes 0 7 0 1
L:L:?1 R:R:Y390 6.9 2 Yes Yes 0 8 0 1
R:R:D116 R:R:V89 5.84 2 No No 8 8 1 2
R:R:L90 R:R:Y390 5.86 0 No Yes 8 8 2 1
R:R:D116 R:R:Y390 6.9 2 No Yes 8 8 1 1
R:R:S168 R:R:V117 4.85 0 No No 8 8 2 1
R:R:I167 R:R:T121 4.56 0 No Yes 8 8 2 1
R:R:A203 R:R:T121 3.36 0 No Yes 8 8 2 1
R:R:I124 R:R:P207 3.39 2 Yes No 8 9 1 2
R:R:F354 R:R:I124 3.77 0 No Yes 9 8 2 1
R:R:I124 R:R:W358 5.87 2 Yes Yes 8 8 1 1
R:R:I189 R:R:Y195 3.63 0 No Yes 6 8 1 2
R:R:S199 R:R:Y195 12.72 0 No Yes 8 8 1 2
R:R:F204 R:R:F354 7.5 0 Yes No 8 9 2 2
R:R:F204 R:R:F362 17.15 0 Yes Yes 8 7 2 1
R:R:F361 R:R:W358 7.02 2 Yes Yes 8 8 1 1
R:R:F362 R:R:W358 5.01 2 Yes Yes 7 8 1 1
R:R:G389 R:R:W358 8.44 0 No Yes 8 8 2 1
R:R:N392 R:R:W358 6.78 0 No Yes 9 8 2 1
R:R:F361 R:R:F362 11.79 2 Yes Yes 8 7 1 1
R:R:F361 R:R:I385 3.77 2 Yes No 8 6 1 2
R:R:W387 R:R:Y390 5.79 0 Yes Yes 8 8 2 1
R:R:A365 R:R:F361 2.77 0 No Yes 8 8 2 1
R:R:F361 R:R:N386 2.42 2 Yes No 8 7 1 2
R:R:G164 R:R:T121 1.82 0 No Yes 8 8 2 1
R:R:C120 R:R:V85 1.71 0 No No 7 8 1 2

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
R:R:V57 R:R:Y402 3.79 0 No No 9 6 2 1
R:R:I130 R:R:R134 5.01 6 No Yes 9 9 2 1
R:R:I130 R:R:Y400 4.84 6 No No 9 9 2 2
R:R:R134 R:R:Y215 7.2 6 Yes Yes 9 9 1 2
R:R:R134 R:R:Y400 4.12 6 Yes No 9 9 1 2
R:R:R134 W:W:?1 4.07 6 Yes Yes 9 0 1 0
R:R:K345 W:W:?1 6.61 0 No Yes 7 0 1 0
R:R:T346 W:W:?1 6.91 0 No Yes 8 0 1 0
R:R:I349 R:R:I399 4.42 0 No No 7 8 1 2
R:R:I349 W:W:?1 5.73 0 No Yes 7 0 1 0
R:R:V398 W:W:?1 4.99 0 No Yes 6 0 1 0
R:R:F411 R:R:Y402 4.13 0 No No 8 6 2 1
R:R:Y402 W:W:?1 7.85 0 No Yes 6 0 1 0
R:R:F403 W:W:?1 37.5 0 No Yes 8 0 1 0
R:R:F407 R:R:N404 10.87 3 Yes No 8 9 2 1
R:R:N404 W:W:?1 13.79 0 No Yes 9 0 1 0
R:R:K405 R:R:Q408 5.42 0 No No 6 9 1 2
R:R:K405 R:R:N409 4.2 0 No No 6 6 1 2
R:R:K405 W:W:?1 3.78 0 No Yes 6 0 1 0
R:R:C49 W:W:?1 3.19 0 No Yes 5 0 1 0
R:R:K342 W:W:?1 2.83 0 No Yes 8 0 1 0
R:R:F48 R:R:L52 2.44 0 No No 4 4 2 1
R:R:L52 W:W:?1 1.85 0 No Yes 4 0 1 0
R:R:L394 W:W:?1 1.85 0 No Yes 7 0 1 0
R:R:G53 R:R:L52 1.71 0 No No 9 4 2 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 9DYF_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3.21
Number of Linked Nodes 265
Number of Links 281
Number of Hubs 29
Number of Links mediated by Hubs 120
Number of Communities 7
Number of Nodes involved in Communities 34
Number of Links involved in Communities 42
Path Summary
Number Of Nodes in MetaPath 67
Number Of Links MetaPath 66
Number of Shortest Paths 38285
Length Of Smallest Path 3
Average Path Length 12.5898
Length of Longest Path 30
Minimum Path Strength 1.17
Average Path Strength 6.37092
Maximum Path Strength 25.645
Minimum Path Correlation 0.7
Average Path Correlation 0.940468
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 4.7619
Average % Of Corr. Nodes 59.5461
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 39.0889
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function• cation binding   • binding   • ion binding   • serotonin binding   • amine binding   • heterocyclic compound binding   • small molecule binding   • G protein-coupled amine receptor activity   • G protein-coupled serotonin receptor activity   • molecular transducer activity   • G protein-coupled receptor activity   • transmembrane signaling receptor activity   • signaling receptor activity   • Gi/o-coupled serotonin receptor activity   • neurotransmitter receptor activity   • serotonin receptor activity   • protein binding   • signaling receptor binding   • receptor-receptor interaction   • tetrapyrrole binding   • heme binding   • electron transfer activity   • transition metal ion binding   • iron ion binding   • metal ion binding   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • cell communication   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction
Gene OntologyBiological Process• cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • cell communication   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction   • behavior   • multicellular organismal process   • exploration behavior   • regulation of amine metabolic process   • dopamine metabolic process   • primary metabolic process   • catechol-containing compound metabolic process   • regulation of primary metabolic process   • amine metabolic process   • catecholamine metabolic process   • phenol-containing compound metabolic process   • metabolic process   • regulation of catecholamine metabolic process   • regulation of metabolic process   • biogenic amine metabolic process   • regulation of dopamine metabolic process   • adult behavior   • regulation of tube diameter   • system process   • regulation of tube size   • regulation of system process   • circulatory system process   • regulation of blood circulation   • regulation of vasoconstriction   • vascular process in circulatory system   • regulation of multicellular organismal process   • blood vessel diameter maintenance   • regulation of biological quality   • blood circulation   • vasoconstriction   • regulation of anatomical structure size   • cell-cell signaling   • gamma-aminobutyric acid signaling pathway   • regulation of behavior   • serotonin metabolic process   • indole-containing compound metabolic process   • cellular response to nitrogen compound   • response to dopamine   • serotonin receptor signaling pathway   • cellular response to dopamine   • response to monoamine   • response to oxygen-containing compound   • response to nitrogen compound   • cellular response to oxygen-containing compound   • cellular response to chemical stimulus   • response to catecholamine   • cellular response to monoamine stimulus   • response to chemical   • cellular response to catecholamine stimulus   • cell population proliferation   • positive regulation of cell population proliferation   • regulation of cell population proliferation   • positive regulation of biological process   • positive regulation of cellular process   • regulation of localization   • regulation of hormone secretion   • transport   • hormone secretion   • localization   • regulation of secretion by cell   • secretion by cell   • signal release   • regulation of signaling   • regulation of transport   • secretion   • regulation of hormone levels   • export from cell   • establishment of localization   • regulation of secretion   • regulation of cell communication   • hormone transport   • monoamine transport   • nitrogen compound transport   • organic hydroxy compound transport   • monoatomic ion transport   • serotonin secretion   • regulation of monoatomic ion transport   • regulation of serotonin secretion   • serotonin transport   • trans-synaptic signaling   • synaptic signaling   • anterograde trans-synaptic signaling   • chemical synaptic transmission   • behavioral defense response   • fear response   • behavioral fear response   • defense response   • response to stress   • multicellular organismal response to stress   • G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger   • electron transport chain   • generation of precursor metabolites and energy   • cell periphery   • cellular anatomical structure   • plasma membrane   • membrane   • somatodendritic compartment   • cell projection   • dendrite   • dendritic tree   • neuron projection   • plasma membrane bounded cell projection   • synapse   • cell junction   • periplasmic space   • protein binding   • binding   • G-protein beta-subunit binding   • fibroblast proliferation   • adenylate cyclase-activating dopamine receptor signaling pathway   • G protein-coupled dopamine receptor signaling pathway   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • response to ketone   • response to prostaglandin   • response to lipid   • response to endogenous stimulus   • response to alcohol   • cellular response to prostaglandin stimulus   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to alcohol   • response to hormone   • cellular response to lipid   • response to prostaglandin E   • cellular response to ketone   • cellular response to hormone stimulus   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cytoplasmic side of plasma membrane   • GTPase complex   • extrinsic component of membrane   • extrinsic component of cytoplasmic side of plasma membrane   • extracellular exosome   • membrane-bounded organelle   • extracellular vesicle   • extracellular organelle   • extracellular region   • organelle   • extracellular space   • vesicle   • extracellular membrane-bounded organelle   • enzyme binding   • GTPase binding   • protein-containing complex binding   • pyrophosphatase activity   • GTPase activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • signaling receptor complex adaptor activity   • protein-macromolecule adaptor activity   • molecular adaptor activity   • signaling adaptor activity   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of taste   • developmental process   • sensory organ development   • eye development   • animal organ development   • retina development in camera-type eye   • visual system development   • multicellular organism development   • camera-type eye development   • anatomical structure development   • sensory system development   • system development   • small GTPase-mediated signal transduction   • Ras protein signal transduction   • intracellular signal transduction   • intracellular signaling cassette   • phospholipase C-activating G protein-coupled receptor signaling pathway   • cellular response to acetylcholine   • acetylcholine receptor signaling pathway   • postsynaptic signal transduction   • G protein-coupled acetylcholine receptor signaling pathway   • response to acetylcholine   • non-motile cilium   • 9+0 non-motile cilium   • cilium   • photoreceptor disc membrane   • photoreceptor outer segment   • photoreceptor cell cilium   • organelle membrane   • intracellular anatomical structure   • cytoplasm   • cytosol   • vacuolar membrane   • lytic vacuole   • vacuole   • intracellular membrane-bounded organelle   • intracellular organelle   • lytic vacuole membrane   • bounding membrane of organelle   • lysosomal membrane   • lysosome   • D2 dopamine receptor binding   • signaling receptor binding   • G protein-coupled receptor binding   • dopamine receptor binding   • enzyme regulator activity   • adenylate cyclase inhibitor activity   • cyclase regulator activity   • molecular function inhibitor activity   • cyclase inhibitor activity   • molecular function regulator activity   • enzyme inhibitor activity   • adenylate cyclase regulator activity   • guanyl nucleotide binding   • GTP binding   • nucleotide binding   • guanyl ribonucleotide binding   • purine ribonucleotide binding   • purine ribonucleoside triphosphate binding   • nucleoside phosphate binding   • ion binding   • purine nucleotide binding   • anion binding   • heterocyclic compound binding   • carbohydrate derivative binding   • ribonucleotide binding   • small molecule binding   • cation binding   • magnesium ion binding   • metal ion binding   • GDP binding   • G protein-coupled serotonin receptor binding   • G-protein beta/gamma-subunit complex binding   • G protein activity   • neuropeptide signaling pathway   • response to peptide hormone   • cell division   • leukocyte migration   • immune system process   • mononuclear cell migration   • lymphocyte migration   • cell migration   • T cell migration   • cell motility   • regulation of steroid biosynthetic process   • regulation of cholesterol biosynthetic process   • regulation of cholesterol metabolic process   • steroid metabolic process   • regulation of lipid metabolic process   • sterol metabolic process   • cholesterol metabolic process   • lipid biosynthetic process   • alcohol metabolic process   • positive regulation of metabolic process   • regulation of small molecule metabolic process   • positive regulation of biosynthetic process   • positive regulation of lipid metabolic process   • small molecule metabolic process   • steroid biosynthetic process   • regulation of biosynthetic process   • secondary alcohol biosynthetic process   • regulation of alcohol biosynthetic process   • small molecule biosynthetic process   • regulation of steroid metabolic process   • cholesterol biosynthetic process   • positive regulation of cholesterol biosynthetic process   • secondary alcohol metabolic process   • positive regulation of steroid biosynthetic process   • biosynthetic process   • sterol biosynthetic process   • positive regulation of lipid biosynthetic process   • regulation of sterol biosynthetic process   • alcohol biosynthetic process   • positive regulation of cholesterol metabolic process   • positive regulation of steroid metabolic process   • regulation of lipid biosynthetic process   • positive regulation of small molecule metabolic process   • positive regulation of alcohol biosynthetic process   • positive regulation of sterol biosynthetic process   • lipid metabolic process   • cell surface receptor signaling pathway   • response to cytokine   • response to chemokine   • cytokine-mediated signaling pathway   • cellular response to chemokine   • chemokine-mediated signaling pathway   • response to peptide   • cellular response to cytokine stimulus   • relaxation of smooth muscle   • regulation of muscle system process   • muscle system process   • relaxation of muscle   • positive regulation of relaxation of smooth muscle   • positive regulation of relaxation of muscle   • positive regulation of multicellular organismal process   • regulation of relaxation of smooth muscle   • regulation of relaxation of muscle   • negative regulation of protein transport   • establishment of protein localization   • negative regulation of biological process   • negative regulation of transport   • negative regulation of secretion   • negative regulation of hormone secretion   • negative regulation of secretion by cell   • intracellular protein localization   • regulation of peptide hormone secretion   • negative regulation of peptide hormone secretion   • establishment of protein localization to extracellular region   • negative regulation of establishment of protein localization   • protein secretion   • regulation of protein secretion   • negative regulation of protein secretion   • regulation of protein localization   • regulation of peptide secretion   • negative regulation of signaling   • negative regulation of cell communication   • protein localization to extracellular region   • negative regulation of peptide secretion   • peptide secretion   • negative regulation of cellular process   • negative regulation of protein localization   • regulation of peptide transport   • regulation of establishment of protein localization   • regulation of protein transport   • peptide transport   • negative regulation of insulin secretion   • protein transport   • regulation of insulin secretion   • peptide hormone secretion   • macromolecule localization   • insulin secretion   • regulation of cytoskeleton organization   • regulation of cellular component organization   • microtubule cytoskeleton organization   • regulation of mitotic spindle organization   • mitotic cell cycle   • cellular component organization   • cell cycle   • cellular component organization or biogenesis   • regulation of cell cycle   • microtubule cytoskeleton organization involved in mitosis   • spindle organization   • cell cycle process   • regulation of cell cycle process   • regulation of microtubule-based process   • regulation of spindle organization   • regulation of organelle organization   • mitotic spindle organization   • organelle organization   • mitotic cell cycle process   • microtubule-based process   • cytoskeleton organization   • regulation of microtubule cytoskeleton organization   • positive regulation of protein localization to cell periphery   • protein localization to cell periphery   • positive regulation of protein localization to cell cortex   • regulation of protein localization to cell periphery   • regulation of protein localization to cell cortex   • positive regulation of protein localization   • protein localization to cell cortex   • cellular response to forskolin   • response to forskolin   • midbody   • nucleus   • membrane-enclosed lumen   • intracellular membraneless organelle   • nucleolus   • intracellular organelle lumen   • organelle lumen   • membraneless organelle   • nuclear lumen   • cell cortex   • centrosome   • microtubule organizing center   • cytoskeleton   • microtubule cytoskeleton   • centriolar satellite   • sperm principal piece   • 9+2 motile cilium   • sperm flagellum   • motile cilium   • nucleoplasm   • Golgi apparatus   • endomembrane system   • ciliary basal body
Gene OntologyCellular Component
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain   • Ras-like P-loop GTPases
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain   • Ras-like P-loop GTPases
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
Code_L_
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
Code_L_
Name
Synonyms
Identifier
Formula
Molecular Weight
SMILES
PubChem
Formal Charge
Total Atoms
Total Chiral Atoms
Total Bonds
Total Aromatic Bonds

CodeJ40
PDB ResiduesW:W:?1
Environment DetailsOpen EMBL-EBI Page
CodeJ40
Name[(2R)-1-[oxidanyl-[(2R,3R,5S,6R)-2,3,5,6-tetrakis(oxidanyl)-4-phosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-3-tetradecanoyloxy-propan-2-yl] (5E,8E)-hexadeca-5,8,11,14-tetraenoate
Synonyms
Identifier
FormulaC39 H68 O16 P2
Molecular Weight854.895
SMILES
PubChem
Formal Charge0
Total Atoms125
Total Chiral Atoms5
Total Bonds125
Total Aromatic Bonds0

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP08908
Sequence
>9DYF_nogp_Chain_R
YQVITSLLL GTLIFCAVL GNACVVAAI ALERSLQNV ANYLIGSLA 
VTDLMVSVL VLPMAALYQ VLNKWTLGQ VTCDLFIAL DVLCCTSSI 
HLCAIALDR YWAITDPID YVNKRTPRR AAALISLTW LIGFLISIP 
PMLGWRTPE DRSDPDACT ISKDHGYTI YSTFGAFYI PLLLMLVLY 
GRIFRAARF RIRKKNERN AEAKRKMAL ARERKTVKT LGIIMGTFI 
LCWLPFFIV ALVLPFCES SCHMPTLLG AIINWLGYS NSLLNPVIY 
AYFNKDFQN AFKKIIKCW


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
7E2XAAmine5-Hydroxytryptamine5-HT1AHomo sapiens-PtdIns4PGi1/β1/γ232021-04-14doi.org/10.1038/s41586-021-03376-8
7E2X (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiens-PtdIns4P32021-04-14doi.org/10.1038/s41586-021-03376-8
7E2YAAmine5-Hydroxytryptamine5-HT1AHomo sapiensSerotoninPtdIns4PGi1/β1/γ232021-04-14doi.org/10.1038/s41586-021-03376-8
7E2Y (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensSerotoninPtdIns4P32021-04-14doi.org/10.1038/s41586-021-03376-8
7E2ZAAmine5-Hydroxytryptamine5-HT1AHomo sapiensAripiprazolePtdIns4PGi1/β1/γ23.12021-04-14doi.org/10.1038/s41586-021-03376-8
7E2Z (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensAripiprazolePtdIns4P3.12021-04-14doi.org/10.1038/s41586-021-03376-8
8JSPAAmine5-Hydroxytryptamine5-HT1AHomo sapiensUlotaront-Gi1/β1/γ23.652023-11-15doi.org/10.1038/s41586-023-06804-z
8JSP (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensUlotaront-3.652023-11-15doi.org/10.1038/s41586-023-06804-z
8W8BAAmine5-Hydroxytryptamine5-HT1AHomo sapiensSEP-363856-Gi1/β1/γ232023-11-22doi.org/10.1038/s41586-023-06775-1
8W8B (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensSEP-363856-32023-11-22doi.org/10.1038/s41586-023-06775-1
8FY8AAmine5-Hydroxytryptamine5-HT1AHomo sapiens5-MeO-DMTPtdIns4PGi1/β1/γ12.792024-05-15doi.org/10.1038/s41586-024-07403-2
8FY8 (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiens5-MeO-DMTPtdIns4P2.792024-05-15doi.org/10.1038/s41586-024-07403-2
8FYEAAmine5-Hydroxytryptamine5-HT1AHomo sapiens4-F,5-MeO-PyrTPtdIns4PGi1/β1/γ12.852024-05-15doi.org/10.1038/s41586-024-07403-2
8FYE (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiens4-F,5-MeO-PyrTPtdIns4P2.852024-05-15doi.org/10.1038/s41586-024-07403-2
8FYLAAmine5-Hydroxytryptamine5-HT1AHomo sapiensVilazodonePtdIns4PGi1/β1/γ12.942024-05-15doi.org/10.1038/s41586-024-07403-2
8FYL (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensVilazodonePtdIns4P2.942024-05-15doi.org/10.1038/s41586-024-07403-2
8FYTAAmine5-Hydroxytryptamine5-HT1AHomo sapiensLSDPtdIns4PGi1/β1/γ12.642024-05-15doi.org/10.1038/s41586-024-07403-2
8FYT (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensLSDPtdIns4P2.642024-05-15doi.org/10.1038/s41586-024-07403-2
8FYXAAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspironePtdIns4PGi1/β1/γ12.722024-05-15doi.org/10.1038/s41586-024-07403-2
8FYX (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspironePtdIns4P2.722024-05-15doi.org/10.1038/s41586-024-07403-2
8PJKAAmine5-Hydroxytryptamine5-HT1AHomo sapiensST171-Gi1/β1/γ12.42024-05-29doi.org/10.1126/sciadv.adv9267
8PJK (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensST171-2.42024-05-29doi.org/10.1126/sciadv.adv9267
8PKMAAmine5-Hydroxytryptamine5-HT1AHomo sapiensBefiradol-Gi1/β1/γ12.92024-05-29doi.org/10.1126/sciadv.adv9267
8PKM (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBefiradol-2.92024-05-29doi.org/10.1126/sciadv.adv9267
8JT6AAmine5-Hydroxytryptamine5-HT1AHomo sapiens(R)-IHCH-7179PtdIns4PGi1/β1/γ232024-02-28doi.org/10.1016/j.cell.2024.02.034
8JT6 (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiens(R)-IHCH-7179PtdIns4P32024-02-28doi.org/10.1016/j.cell.2024.02.034
9GL2AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBefiradol-Gs/β1/γ23.22025-07-02doi.org/10.1126/sciadv.adv9267
9GL2 (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBefiradol-3.22025-07-02doi.org/10.1126/sciadv.adv9267
9DYDAAmine5-Hydroxytryptamine5-HT1AHomo sapiensAsenapinePtdIns4PGo/β1/γ22.962025-08-13doi.org/10.1126/sciadv.adu9851
9DYD (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensAsenapinePtdIns4P2.962025-08-13doi.org/10.1126/sciadv.adu9851
9DYEAAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspironePtdIns4PGo/β1/γ22.92025-08-13doi.org/10.1126/sciadv.adu9851
9DYE (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspironePtdIns4P2.92025-08-13doi.org/10.1126/sciadv.adu9851
9DYFAAmine5-Hydroxytryptamine5-HT1AHomo sapiensAsenapinePtdIns4PGi1/β1/γ22.742025-08-13doi.org/10.1126/sciadv.adu9851
9DYF (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensAsenapinePtdIns4P2.742025-08-13doi.org/10.1126/sciadv.adu9851
9MD1AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspironePtdIns4PGz/β1/γ23.032025-08-13doi.org/10.1126/sciadv.adu9851
9MD1 (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspironePtdIns4P3.032025-08-13doi.org/10.1126/sciadv.adu9851
9VJ5AAmine5-Hydroxytryptamine5-HT1AHomo sapiensGepirone-Go/β1/γ22.692025-11-12To be published
9VJ5 (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensGepirone-2.692025-11-12To be published
9VJ6AAmine5-Hydroxytryptamine5-HT1AHomo sapiensF-15599-Gi3/β1/γ22.622025-11-12To be published
9VJ6 (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensF-15599-2.622025-11-12To be published
9VJEAAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspirone-Go/β1/γ22.472025-11-12To be published
9VJE (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspirone-2.472025-11-12To be published
9VJFAAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspirone-Gi3/β1/γ22.72025-11-12To be published
9VJF (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspirone-2.72025-11-12To be published
9VJGAAmine5-Hydroxytryptamine5-HT1AHomo sapiens8-OH-DPAT-chim(NtGi2-Gz)/β1/γ22.672025-11-12To be published
9VJG (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiens8-OH-DPAT-2.672025-11-12To be published
9VMYAAmine5-Hydroxytryptamine5-HT1AHomo sapiensTMU4142-Go/β1/γ22.862025-11-12To be published
9VMY (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensTMU4142-2.862025-11-12To be published
9VNFAAmine5-Hydroxytryptamine5-HT1AHomo sapiensPindolol-Go/β1/γ22.742025-11-12To be published
9VNF (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensPindolol-2.742025-11-12To be published
9KVGAAmine5-Hydroxytryptamine5-HT1AHomo sapiens5-MeO-DMTPtdIns4PGi1/β1/γ22.632025-12-03To be published
9KVG (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiens5-MeO-DMTPtdIns4P2.632025-12-03To be published
9KVHAAmine5-Hydroxytryptamine5-HT1AHomo sapiensCinobufoteninePtdIns4PGi1/β1/γ22.592025-12-03To be published
9KVH (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensCinobufoteninePtdIns4P2.592025-12-03To be published
9KVIAAmine5-Hydroxytryptamine5-HT1AHomo sapiensBufoteninPtdIns4PGi1/β1/γ22.542025-12-03To be published
9KVI (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBufoteninPtdIns4P2.542025-12-03To be published
9HYIAAmine5-Hydroxytryptamine5-HT1AHomo sapiensDP81-Gi1/β1/γ22.32026-01-21To be published
9HYI (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensDP81-2.32026-01-21To be published




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