Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:V57 4.038529
2R:R:E64 4.136527
3R:R:L67 4.045428
4R:R:L74 3.555408
5R:R:L78 5.0075419
6R:R:D82 5.6175409
7R:R:S86 3.635408
8R:R:L90 4.124508
9R:R:W102 7.23667639
10R:R:C109 5.1425439
11R:R:D116 8.3275418
12R:R:T121 3.8775408
13R:R:W125 4.96407
14R:R:H126 6.78518
15R:R:L127 4.63518
16R:R:Y135 9.5725409
17R:R:R148 8.1775408
18R:R:T160 4.1825408
19R:R:W161 8.4575419
20R:R:I167 4.5725408
21R:R:C187 4.9675439
22R:R:Y195 5.93408
23R:R:F204 7.64833618
24R:R:Y205 5.8075417
25R:R:Y215 4.688519
26R:R:T343 1.935408
27R:R:L347 2.675408
28R:R:F354 5.4675419
29R:R:W358 7.44167618
30R:R:L359 4.125407
31R:R:F362 7.53517
32R:R:F370 5.855445
33R:R:I385 3.4825406
34R:R:Y390 6.60833618
35R:R:N392 9.34409
36R:R:L394 2.57407
37R:R:Y400 6.32419
38R:R:Y402 4.5925406
39R:R:F407 5.07857728
40R:R:F411 6.2428
41L:L:?1 7.21714710
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:W387 R:R:Y390 17.00199.65NoYes088
2R:R:A93 R:R:Y390 82.71484NoYes078
3R:R:A93 R:R:F112 80.69792.77NoNo076
4R:R:F112 R:R:M92 32.37034.98NoNo066
5R:R:M92 R:R:W102 30.16454.65NoYes069
6R:R:L104 R:R:W102 32.898111.39NoYes379
7R:R:L104 R:R:T103 28.29762.95NoNo075
8R:R:L99 R:R:T103 23.60821.47NoNo055
9R:R:L99 R:R:V98 14.1962.98NoNo056
10R:R:C187 R:R:F112 46.23852.79YesNo096
11R:R:C187 R:R:W102 30.27566.53YesYes399
12R:R:L90 R:R:Y390 45.29955.86YesYes088
13R:R:L90 R:R:S86 45.73293YesYes088
14R:R:F411 R:R:Y402 37.97099.28YesYes086
15R:R:P397 R:R:Y402 80.74792.78NoYes096
16R:R:N54 R:R:P397 82.38144.89NoNo099
17R:R:D82 R:R:N54 67.71866.73YesNo099
18R:R:D82 R:R:S393 29.53664.42YesNo099
19R:R:S393 R:R:S86 28.84774.89NoYes098
20R:R:L83 R:R:N54 24.71395.49NoNo089
21R:R:L83 R:R:V51 20.04114.47NoNo087
22R:R:S86 R:R:V51 20.46343.23YesNo087
23R:R:V57 R:R:Y402 37.97093.79YesYes096
24R:R:F407 R:R:V57 26.8536.55YesYes289
25R:R:F407 R:R:F411 27.07528.57YesYes288
26R:R:D82 R:R:L78 60.75675.43YesYes099
27R:R:H126 R:R:L78 44.59947.71YesYes189
28R:R:H126 R:R:T81 15.49626.85YesNo189
29R:R:T81 R:R:W161 13.81827.28NoYes199
30R:R:M84 R:R:W161 10.392.33NoYes079
31R:R:H126 R:R:S122 15.44064.18YesNo188
32R:R:S122 R:R:W161 13.762618.53NoYes189
33R:R:E64 R:R:L67 27.21976.63YesYes278
34R:R:F407 R:R:L67 42.59363.65YesYes288
35R:R:E64 R:R:L63 11.74575.3YesNo076
36L:L:?1 R:R:Y390 75.14723.99YesYes108
37L:L:?1 R:R:F362 88.45988.29YesYes107
38R:R:F204 R:R:F362 65.401720.36YesYes187
39R:R:F204 R:R:F354 53.94496.43YesYes189
40R:R:F354 R:R:L127 1003.65YesYes198
41R:R:L127 R:R:Y400 45.99967.03YesYes189
42R:R:I130 R:R:Y400 34.47056.04NoYes199
43R:R:I130 R:R:L74 32.62032.85NoYes098
44R:R:A153 R:R:L74 14.61833.15NoYes078
45R:R:A153 R:R:Y73 12.56251.33NoNo076
46R:R:F362 R:R:W358 37.28753.01YesYes178
47R:R:F354 R:R:W358 34.37058.02YesYes198
48R:R:D133 R:R:L74 14.61834.07NoYes098
49R:R:D133 R:R:R148 10.49563.57NoYes098
50R:R:T160 R:R:W125 17.91312.43YesYes087
51R:R:T121 R:R:W125 19.11322.43YesYes087
52R:R:I167 R:R:T121 16.85196.08YesYes088
53R:R:I167 R:R:S199 14.90723.1YesNo088
54L:L:?1 R:R:S199 32.35917.66YesNo008
55R:R:A203 R:R:T121 17.2133.36NoYes088
56R:R:A203 R:R:F362 19.15212.77NoYes087
57R:R:W102 R:R:Y96 14.1969.65YesNo096
58R:R:L118 R:R:W161 13.90715.69NoYes069
59R:R:L127 R:R:M211 79.89782.83YesNo189
60R:R:A131 R:R:Y215 56.68416.67NoYes099
61R:R:M211 R:R:Y215 76.93638.38NoYes199
62R:R:M351 R:R:Y215 24.2363.59NoYes189
63R:R:L212 R:R:M351 25.2254.24NoNo068
64R:R:L208 R:R:L212 25.1752.77NoNo076
65R:R:F204 R:R:L208 26.26964.87YesNo087
66R:R:L132 R:R:L214 23.74714.15NoNo067
67R:R:A131 R:R:L214 54.21711.58NoNo097
68R:R:L132 R:R:W136 21.135717.08NoNo065
69R:R:L214 R:R:Y135 29.08665.86NoYes079
70R:R:R217 R:R:Y135 10.72911.32NoYes079
71R:R:R152 R:R:W136 18.50767NoNo075
72R:R:D140 R:R:D143 10.7299.31NoNo076
73R:R:D143 R:R:R152 16.0245.96NoNo067
74R:R:I167 R:R:Y198 11.29576.04YesNo085
75R:R:S199 R:R:Y195 19.19662.54NoYes088
76R:R:F370 R:R:L366 10.69562.44YesNo057
77R:R:L366 R:R:Y205 12.44035.86NoYes077
78R:R:F204 R:R:Y205 19.30774.13YesYes187
79R:R:F204 R:R:L359 28.35326.09YesYes087
80R:R:F219 R:R:L347 18.51874.87NoYes068
81R:R:L347 R:R:Y215 39.04321.17YesYes089
82R:R:F219 R:R:R223 13.24049.62NoNo067
83R:R:R223 R:R:R227 10.584511.73NoNo076
84R:R:L347 R:R:T343 15.88512.95YesYes088
85R:R:F354 R:R:I355 16.69633.77YesNo097
86R:R:I355 R:R:L359 14.00712.85NoYes077
87R:R:L359 R:R:P360 25.34173.28YesNo079
88R:R:I363 R:R:L359 12.8574.28NoYes077
89R:R:I385 R:R:P360 22.8473.39YesNo069
90R:R:I363 R:R:V367 10.30671.54NoNo076
91R:R:I385 R:R:L381 10.30675.71YesNo066
92R:R:L127 R:R:L78 63.35152.77YesYes189
93R:R:H126 R:R:T160 18.54659.58YesYes088
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
R:R:D116 R:R:V89 10.22 1 Yes No 8 8 1 2
R:R:L90 R:R:Y390 5.86 0 Yes Yes 8 8 2 1
R:R:A93 R:R:Y390 4 0 No Yes 7 8 2 1
R:R:C120 R:R:D116 4.67 1 No Yes 7 8 1 1
R:R:D116 R:R:Y390 10.34 1 Yes Yes 8 8 1 1
L:L:?1 R:R:D116 8.08 1 Yes Yes 0 8 0 1
L:L:?1 R:R:C120 10.8 1 Yes No 0 7 0 1
R:R:I167 R:R:S199 3.1 0 Yes No 8 8 2 1
L:L:?1 R:R:S199 7.66 1 Yes No 0 8 0 1
R:R:A203 R:R:F362 2.77 0 No Yes 8 7 2 1
R:R:F204 R:R:W358 4.01 1 Yes Yes 8 8 2 2
R:R:F204 R:R:F362 20.36 1 Yes Yes 8 7 2 1
R:R:F362 R:R:W358 3.01 1 Yes Yes 7 8 1 2
R:R:F361 R:R:F362 3.22 1 No Yes 8 7 1 1
R:R:F361 R:R:N386 7.25 1 No No 8 7 1 2
L:L:?1 R:R:F361 10.36 1 Yes No 0 8 0 1
L:L:?1 R:R:F362 8.29 1 Yes Yes 0 7 0 1
R:R:N386 R:R:Y390 5.81 0 No Yes 7 8 2 1
R:R:W387 R:R:Y390 9.65 0 No Yes 8 8 2 1
L:L:?1 R:R:Y390 3.99 1 Yes Yes 0 8 0 1
R:R:S199 R:R:Y195 2.54 0 No Yes 8 8 1 2
L:L:?1 R:R:A365 1.34 1 Yes No 0 8 0 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 7E2Y_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 2.77
Number of Linked Nodes 254
Number of Links 279
Number of Hubs 41
Number of Links mediated by Hubs 151
Number of Communities 4
Number of Nodes involved in Communities 43
Number of Links involved in Communities 58
Path Summary
Number Of Nodes in MetaPath 94
Number Of Links MetaPath 93
Number of Shortest Paths 56046
Length Of Smallest Path 3
Average Path Length 12.6425
Length of Longest Path 27
Minimum Path Strength 1.155
Average Path Strength 5.40275
Maximum Path Strength 14.4
Minimum Path Correlation 0.7
Average Path Correlation 0.938306
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 5
Average % Of Corr. Nodes 57.1088
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 51.7001
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function• D2 dopamine receptor binding   • protein binding   • binding   • signaling receptor binding   • G protein-coupled receptor binding   • dopamine receptor binding   • phosphorus-oxygen lyase activity   • enzyme regulator activity   • cyclase regulator activity   • molecular function regulator activity   • cyclase activity   • adenylate cyclase regulator activity   • lyase activity   • catalytic activity   • adenylate cyclase activity   • guanyl nucleotide binding   • GTP binding   • nucleotide binding   • guanyl ribonucleotide binding   • purine ribonucleotide binding   • purine ribonucleoside triphosphate binding   • nucleoside phosphate binding   • ion binding   • purine nucleotide binding   • anion binding   • heterocyclic compound binding   • carbohydrate derivative binding   • ribonucleotide binding   • small molecule binding   • cation binding   • magnesium ion binding   • metal ion binding   • GDP binding   • G protein-coupled serotonin receptor binding   • protein-containing complex binding   • G-protein beta/gamma-subunit complex binding   • pyrophosphatase activity   • GTPase activity   • G protein activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • cell communication   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction
Gene OntologyBiological Process• cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • cell communication   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction   • response to hormone   • response to chemical   • response to endogenous stimulus   • response to peptide hormone   • response to oxygen-containing compound   • response to nitrogen compound   • cell division   • leukocyte migration   • immune system process   • mononuclear cell migration   • lymphocyte migration   • cell migration   • T cell migration   • cell motility   • regulation of steroid biosynthetic process   • regulation of cholesterol biosynthetic process   • regulation of cholesterol metabolic process   • steroid metabolic process   • regulation of lipid metabolic process   • sterol metabolic process   • positive regulation of biological process   • cholesterol metabolic process   • lipid biosynthetic process   • alcohol metabolic process   • regulation of primary metabolic process   • positive regulation of metabolic process   • regulation of small molecule metabolic process   • positive regulation of biosynthetic process   • positive regulation of lipid metabolic process   • small molecule metabolic process   • steroid biosynthetic process   • positive regulation of cellular process   • regulation of biosynthetic process   • secondary alcohol biosynthetic process   • regulation of alcohol biosynthetic process   • small molecule biosynthetic process   • regulation of steroid metabolic process   • cholesterol biosynthetic process   • positive regulation of cholesterol biosynthetic process   • primary metabolic process   • secondary alcohol metabolic process   • positive regulation of steroid biosynthetic process   • biosynthetic process   • sterol biosynthetic process   • positive regulation of lipid biosynthetic process   • regulation of sterol biosynthetic process   • alcohol biosynthetic process   • positive regulation of cholesterol metabolic process   • positive regulation of steroid metabolic process   • metabolic process   • regulation of lipid biosynthetic process   • positive regulation of small molecule metabolic process   • regulation of metabolic process   • positive regulation of alcohol biosynthetic process   • positive regulation of sterol biosynthetic process   • lipid metabolic process   • regulation of cytoskeleton organization   • regulation of cellular component organization   • microtubule cytoskeleton organization   • regulation of mitotic spindle organization   • mitotic cell cycle   • cellular component organization   • cell cycle   • cellular component organization or biogenesis   • regulation of cell cycle   • microtubule cytoskeleton organization involved in mitosis   • spindle organization   • cell cycle process   • regulation of cell cycle process   • regulation of microtubule-based process   • regulation of spindle organization   • regulation of organelle organization   • mitotic spindle organization   • organelle organization   • mitotic cell cycle process   • microtubule-based process   • cytoskeleton organization   • regulation of microtubule cytoskeleton organization   • protein localization   • positive regulation of protein localization to cell periphery   • regulation of localization   • protein localization to cell periphery   • cellular localization   • regulation of protein localization   • positive regulation of protein localization to cell cortex   • regulation of protein localization to cell periphery   • localization   • regulation of cellular localization   • regulation of protein localization to cell cortex   • cellular macromolecule localization   • macromolecule localization   • positive regulation of protein localization   • protein localization to cell cortex   • response to ketone   • response to prostaglandin   • response to lipid   • response to alcohol   • response to prostaglandin E   • cellular response to forskolin   • cellular response to oxygen-containing compound   • cellular response to chemical stimulus   • cellular response to alcohol   • response to forskolin   • cellular response to lipid   • cellular response to ketone   • midbody   • cellular anatomical structure   • membrane-bounded organelle   • intracellular anatomical structure   • nucleus   • membrane-enclosed lumen   • intracellular membraneless organelle   • intracellular membrane-bounded organelle   • nucleolus   • intracellular organelle lumen   • intracellular organelle   • organelle lumen   • organelle   • membraneless organelle
Gene OntologyCellular Component• midbody   • cellular anatomical structure   • membrane-bounded organelle   • intracellular anatomical structure   • nucleus   • membrane-enclosed lumen   • intracellular membraneless organelle   • intracellular membrane-bounded organelle   • nucleolus   • intracellular organelle lumen   • intracellular organelle   • organelle lumen   • organelle   • membraneless organelle   • nuclear lumen   • cell periphery   • cell cortex   • cytoplasm   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • membrane   • plasma membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cytoplasmic side of plasma membrane   • GTPase complex   • extrinsic component of membrane   • extrinsic component of cytoplasmic side of plasma membrane   • extracellular exosome   • extracellular vesicle   • extracellular organelle   • extracellular region   • extracellular space   • vesicle   • extracellular membrane-bounded organelle   • centrosome   • microtubule organizing center   • cytoskeleton   • microtubule cytoskeleton   • centriolar satellite   • cytosol   • nucleoplasm   • vacuolar membrane   • lytic vacuole   • vacuole   • lytic vacuole membrane   • bounding membrane of organelle   • lysosomal membrane   • organelle membrane   • lysosome   • Golgi apparatus   • endomembrane system   • cilium   • plasma membrane bounded cell projection   • ciliary basal body   • cell projection   • protein binding   • binding   • enzyme binding   • GTPase binding   • protein-containing complex binding   • pyrophosphatase activity   • GTPase activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • signaling receptor complex adaptor activity   • protein-macromolecule adaptor activity   • molecular adaptor activity   • signaling adaptor activity   • multicellular organismal process   • system process   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of taste   • developmental process   • sensory organ development   • eye development   • animal organ development   • retina development in camera-type eye   • visual system development   • multicellular organism development   • camera-type eye development   • anatomical structure development   • sensory system development   • system development   • cell population proliferation   • cellular process   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • signal transduction   • cell communication   • response to ketone   • response to prostaglandin   • response to lipid   • response to endogenous stimulus   • response to alcohol   • cellular response to prostaglandin stimulus   • response to oxygen-containing compound   • cellular response to oxygen-containing compound   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to chemical stimulus   • cellular response to alcohol   • response to hormone   • response to chemical   • cellular response to lipid   • response to prostaglandin E   • cellular response to ketone   • cellular response to hormone stimulus   • small GTPase-mediated signal transduction   • Ras protein signal transduction   • intracellular signal transduction   • intracellular signaling cassette   • phospholipase C-activating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular response to nitrogen compound   • response to dopamine   • cellular response to dopamine   • response to monoamine   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • G protein-coupled dopamine receptor signaling pathway   • response to nitrogen compound   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cellular response to monoamine stimulus   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • synaptic signaling   • cellular response to acetylcholine   • cell-cell signaling   • acetylcholine receptor signaling pathway   • postsynaptic signal transduction   • G protein-coupled acetylcholine receptor signaling pathway   • response to acetylcholine   • non-motile cilium   • 9+0 non-motile cilium   • neuron projection   • photoreceptor disc membrane   • photoreceptor outer segment   • photoreceptor cell cilium   • synapse   • cell junction   • G-protein beta-subunit binding   • fibroblast proliferation   • tetrapyrrole binding   • heme binding   • electron transfer activity   • cation binding   • transition metal ion binding   • iron ion binding   • ion binding   • metal ion binding   • small molecule binding   • serotonin binding   • amine binding   • heterocyclic compound binding   • G protein-coupled amine receptor activity   • G protein-coupled serotonin receptor activity   • molecular transducer activity   • G protein-coupled receptor activity   • transmembrane signaling receptor activity   • signaling receptor activity   • Gi/o-coupled serotonin receptor activity   • neurotransmitter receptor activity   • serotonin receptor activity   • signaling receptor binding   • receptor-receptor interaction   • electron transport chain   • metabolic process   • generation of precursor metabolites and energy   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • behavior   • exploration behavior   • regulation of amine metabolic process   • dopamine metabolic process   • primary metabolic process   • catechol-containing compound metabolic process   • regulation of primary metabolic process   • amine metabolic process   • catecholamine metabolic process   • phenol-containing compound metabolic process   • regulation of catecholamine metabolic process   • regulation of metabolic process   • biogenic amine metabolic process   • regulation of dopamine metabolic process   • regulation of tube diameter   • regulation of tube size   • regulation of system process   • circulatory system process   • regulation of blood circulation   • regulation of vasoconstriction   • vascular process in circulatory system   • regulation of multicellular organismal process   • blood vessel diameter maintenance   • regulation of biological quality   • blood circulation   • vasoconstriction   • regulation of anatomical structure size   • gamma-aminobutyric acid signaling pathway   • regulation of behavior   • ammonium ion metabolic process   • serotonin metabolic process   • indole-containing compound metabolic process   • primary amino compound metabolic process   • serotonin receptor signaling pathway   • positive regulation of cell population proliferation   • regulation of cell population proliferation   • positive regulation of biological process   • positive regulation of cellular process   • regulation of localization   • regulation of hormone secretion   • transport   • hormone secretion   • localization   • regulation of secretion by cell   • secretion by cell   • signal release   • regulation of signaling   • regulation of transport   • secretion   • regulation of hormone levels   • export from cell   • establishment of localization   • regulation of secretion   • regulation of cell communication   • hormone transport   • monoamine transport   • nitrogen compound transport   • organic hydroxy compound transport   • monoatomic ion transport   • serotonin secretion   • regulation of monoatomic ion transport   • regulation of serotonin secretion   • serotonin transport   • trans-synaptic signaling   • anterograde trans-synaptic signaling   • chemical synaptic transmission   • behavioral defense response   • fear response   • behavioral fear response   • defense response   • response to stress   • multicellular organismal response to stress   • G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger   • periplasmic space   • somatodendritic compartment   • dendrite   • dendritic tree
SCOP2Domain Identifier• Ras-like P-loop GTPases
SCOP2Family Identifier• Ras-like P-loop GTPases
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeSRO
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodeSRO
NameSerotonin
SynonymsSerotonin
Identifier
FormulaC10 H12 N2 O
Molecular Weight176.215
SMILES
PubChem5202
Formal Charge0
Total Atoms25
Total Chiral Atoms0
Total Bonds26
Total Aromatic Bonds10

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP08908
Sequence
>7E2Y_nogp_Chain_R
YQVITSLLL GTLIFCAVL GNACVVAAI ALERSLQNV ANYLIGSLA 
VTDLMVSVL VLPMAALYQ VLNKWTLGQ VTCDLFIAL DVLCCTSSI 
WHLCAIALD RYWAITDPI DYVNKRTPR RAAALISLT WLIGFLISI 
PPMLGDACT ISKDHGYTI YSTFGAFYI PLLLMLVLY GRIFRAARF 
RIRKKNERN AEAKRKMAL ARERKTVKT LGIIMGTFI LCWLPFFIV 
ALVLPFCES SCHMPTLLG AIINWLGYS NSLLNPVIY AYFNKDFQN 
AFKKII


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
8PKMAAmine5-Hydroxytryptamine5-HT1AHomo sapiensBefiradolt7mGi1/β1/γ12.92024-05-29To be published
8PKM (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBefiradolt7m2.92024-05-29To be published
8PJKAAmine5-Hydroxytryptamine5-HT1AHomo sapiensST171t7mGi1/β1/γ12.42024-05-29To be published
8PJK (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensST171t7m2.42024-05-29To be published
8FYXAAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspirone-Gi1/β1/γ12.722024-05-1510.1038/s41586-024-07403-2
8FYX (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspirone-2.722024-05-1510.1038/s41586-024-07403-2
8FYTAAmine5-Hydroxytryptamine5-HT1AHomo sapiensLSD-Gi1/β1/γ12.642024-05-1510.1038/s41586-024-07403-2
8FYT (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensLSD-2.642024-05-1510.1038/s41586-024-07403-2
8FYLAAmine5-Hydroxytryptamine5-HT1AHomo sapiensVilazodone-Gi1/β1/γ12.942024-05-1510.1038/s41586-024-07403-2
8FYL (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensVilazodone-2.942024-05-1510.1038/s41586-024-07403-2
8FYEAAmine5-Hydroxytryptamine5-HT1AHomo sapiens4-F,5-MeO-PyrT-Gi1/β1/γ12.852024-05-1510.1038/s41586-024-07403-2
8FYE (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiens4-F,5-MeO-PyrT-2.852024-05-1510.1038/s41586-024-07403-2
8FY8AAmine5-Hydroxytryptamine5-HT1AHomo sapiens5-MeO-DMT-Gi1/β1/γ12.792024-05-1510.1038/s41586-024-07403-2
8FY8 (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiens5-MeO-DMT-2.792024-05-1510.1038/s41586-024-07403-2
8JT6AAmine5-Hydroxytryptamine5-HT1AHomo sapiens(R)-IHCH-7179-Gi1/β1/γ232024-02-28To be published
8JT6 (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiens(R)-IHCH-7179-32024-02-28To be published
8W8BAAmine5-Hydroxytryptamine5-HT1AHomo sapiensSEP-363856-Gi1/β1/γ232023-11-2210.1038/s41586-023-06775-1
8W8B (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensSEP-363856-32023-11-2210.1038/s41586-023-06775-1
8JSPAAmine5-Hydroxytryptamine5-HT1AHomo sapiensUlotaront-Gi1/β1/γ23.652023-11-1510.1038/s41586-023-06804-z
8JSP (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensUlotaront-3.652023-11-1510.1038/s41586-023-06804-z
7E2ZAAmine5-Hydroxytryptamine5-HT1AHomo sapiensAripiprazole-Gi1/β1/γ23.12021-04-1410.1038/s41586-021-03376-8
7E2Z (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensAripiprazole-3.12021-04-1410.1038/s41586-021-03376-8
7E2YAAmine5-Hydroxytryptamine5-HT1AHomo sapiensSerotonin-Gi1/β1/γ232021-04-1410.1038/s41586-021-03376-8
7E2Y (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensSerotonin-32021-04-1410.1038/s41586-021-03376-8
7E2XAAmine5-Hydroxytryptamine5-HT1AHomo sapiens--Gi1/β1/γ232021-04-1410.1038/s41586-021-03376-8
7E2X (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiens--32021-04-1410.1038/s41586-021-03376-8




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