Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:?1 9.20778910
2R:R:L67 4.29448
3R:R:D82 5.596539
4R:R:L83 2.5725408
5R:R:V98 3.01406
6R:R:W102 7.52519
7R:R:H126 7.8408
8R:R:R134 4.585429
9R:R:Y135 8.635409
10R:R:R148 6.414508
11R:R:W161 8.438559
12R:R:P170 6.1475408
13R:R:C187 5.96419
14R:R:Y195 7.244508
15R:R:F204 8.965408
16R:R:M211 4.1275409
17R:R:Y215 4.35667609
18R:R:F219 4.946506
19R:R:E340 8.4825478
20R:R:F354 4.1275409
21R:R:W358 6.55167618
22R:R:L359 4.84407
23R:R:F361 9.2225418
24R:R:F362 8.672517
25R:R:W387 7.495408
26R:R:Y390 8.765418
27R:R:N396 7.155439
28R:R:Y400 4.62429
29R:R:Y402 6.19426
30R:R:F407 9.4275448
31W:W:?1 10.65820
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:?1 R:R:W102 41.08514.47YesYes109
2R:R:L104 R:R:W102 35.34611.39NoYes079
3R:R:L104 R:R:T108 33.24587.37NoNo076
4R:R:F112 R:R:T108 31.1312.59NoNo066
5R:R:F112 R:R:M92 29.00177.46NoNo066
6R:R:L95 R:R:M92 26.85771.41NoNo066
7R:R:L95 R:R:L99 24.69924.15NoNo065
8L:L:?1 R:R:Y390 34.638711.5YesYes108
9R:R:W387 R:R:Y390 13.55659.65YesYes088
10R:R:L90 R:R:Y390 20.22175.86NoYes088
11R:R:L90 R:R:S86 11.44173NoNo088
12L:L:?1 R:R:F361 20.301915.93YesYes108
13R:R:F361 R:R:W358 22.19795.01YesYes188
14R:R:N392 R:R:W358 59.03899.04NoYes098
15R:R:N392 R:R:N396 54.481110.9NoYes099
16R:R:D82 R:R:N396 24.45856.73YesYes399
17L:L:?1 R:R:F362 88.13535.57YesYes107
18R:R:F362 R:R:W358 42.08425.01YesYes178
19R:R:D82 R:R:N54 14.25654.04YesNo099
20R:R:F204 R:R:F362 95.989218.22YesYes087
21R:R:F204 R:R:F354 91.13255.36YesYes089
22R:R:F354 R:R:M211 1003.73YesYes099
23R:R:M211 R:R:Y215 98.57073.59YesYes099
24R:R:R134 R:R:Y215 73.17875.14YesYes099
25R:R:R134 W:W:?1 67.71684.07YesYes290
26R:R:Y402 W:W:?1 21.330110.99YesYes260
27R:R:V57 R:R:Y402 13.82633.79NoYes096
28R:R:N404 W:W:?1 34.12095.52NoYes090
29R:R:F407 R:R:N404 32.348913.29YesNo089
30R:R:F407 R:R:L67 23.00748.53YesYes488
31R:R:A410 R:R:L67 11.89383.15NoYes088
32R:R:I218 R:R:Y215 60.3883.63NoYes099
33R:R:I218 R:R:Y135 58.84933.63NoYes099
34R:R:L214 R:R:Y135 47.67015.86NoYes079
35R:R:L132 R:R:L214 44.34484.15NoNo067
36R:R:L132 R:R:W136 42.660214.81NoNo065
37R:R:R152 R:R:W136 40.95385NoNo075
38R:R:R148 R:R:R152 26.94527.46YesNo087
39R:R:R148 R:R:V70 15.74427.85YesNo087
40R:R:P150 R:R:V70 11.89383.53NoNo057
41R:R:L78 R:R:N396 35.57944.12NoYes399
42R:R:H126 R:R:L78 34.66786.43YesNo089
43R:R:H126 R:R:T81 14.00865.48YesNo089
44R:R:H126 R:R:T160 14.008612.32YesNo088
45R:R:L99 R:R:T103 13.68771.47NoNo055
46R:R:K101 R:R:T103 11.44171.5NoNo055
47R:R:A203 R:R:F362 84.46732.77NoYes087
48R:R:A203 R:R:T121 83.24953.36NoNo088
49R:R:I167 R:R:T121 80.76286.08NoNo088
50R:R:I167 R:R:Y198 78.31263.63NoNo085
51R:R:P170 R:R:Y198 71.7135.56YesNo085
52R:R:P170 R:R:P171 33.61045.84YesNo087
53R:R:P171 R:R:Y195 32.064516.69NoYes078
54R:R:D192 R:R:Y195 44.64383.45NoYes068
55R:R:D192 R:R:T177 37.93484.34NoNo065
56R:R:D180 R:R:T177 27.7625.78NoNo045
57R:R:D180 R:R:R176 20.907217.87NoNo046
58R:R:R176 R:R:R181 13.9949.6NoNo064
59R:R:D110 R:R:R181 10.515610.72NoNo074
60R:R:P170 R:R:W175 35.38258.11YesNo086
61R:R:W175 R:R:Y195 32.29054.82NoYes068
62R:R:I124 R:R:W358 14.4689.4NoYes088
63R:R:L127 R:R:N396 33.24586.87NoYes089
64R:R:L127 R:R:Y400 32.31974.69NoYes089
65R:R:D143 R:R:R152 13.81910.72NoNo067
66R:R:I189 R:R:Y195 13.90653.63NoYes068
67R:R:F204 R:R:Y205 17.14436.19YesNo087
68R:R:F201 R:R:Y205 11.53658.25NoNo057
69R:R:I189 R:R:K191 10.51562.91NoNo065
70R:R:L347 R:R:Y215 24.93984.69NoYes089
71R:R:F219 R:R:L347 23.09493.65YesNo068
72R:R:F219 R:R:R223 13.651311.76YesNo067
73R:R:C357 R:R:N392 10.902111.02NoNo089
74L:L:?1 R:R:N386 24.58988.98YesNo007
75R:R:I385 R:R:N386 22.52612.83NoNo067
76R:R:I385 R:R:V364 18.13614.61NoNo066
77R:R:L368 R:R:V364 15.91924.47NoNo046
78R:R:F354 R:R:I124 11.00423.77YesNo098
79R:R:R134 R:R:Y400 27.98074.12YesYes299
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:?1 R:R:W102 4.47 1 Yes Yes 0 9 0 1
L:L:?1 R:R:D116 20.41 1 Yes No 0 8 0 1
L:L:?1 R:R:V117 8.77 1 Yes No 0 8 0 1
L:L:?1 R:R:C187 4.15 1 Yes Yes 0 9 0 1
L:L:?1 R:R:F361 15.93 1 Yes Yes 0 8 0 1
L:L:?1 R:R:F362 5.57 1 Yes Yes 0 7 0 1
L:L:?1 R:R:N386 8.98 1 Yes No 0 7 0 1
L:L:?1 R:R:Y390 11.5 1 Yes Yes 0 8 0 1
R:R:D116 R:R:V89 5.84 1 No No 8 8 1 2
R:R:L90 R:R:Y390 5.86 0 No Yes 8 8 2 1
R:R:W102 R:R:Y96 8.68 1 Yes No 9 6 1 2
R:R:L104 R:R:W102 11.39 0 No Yes 7 9 2 1
R:R:C109 R:R:W102 3.92 1 No Yes 9 9 2 1
R:R:C187 R:R:W102 9.14 1 Yes Yes 9 9 1 1
R:R:C109 R:R:C187 7.28 1 No Yes 9 9 2 1
R:R:D116 R:R:Y390 8.05 1 No Yes 8 8 1 1
R:R:F204 R:R:F362 18.22 0 Yes Yes 8 7 2 1
R:R:F361 R:R:W358 5.01 1 Yes Yes 8 8 1 2
R:R:F362 R:R:W358 5.01 1 Yes Yes 7 8 1 2
R:R:F361 R:R:F362 11.79 1 Yes Yes 8 7 1 1
R:R:A365 R:R:F361 4.16 0 No Yes 8 8 2 1
R:R:W387 R:R:Y390 9.65 0 Yes Yes 8 8 2 1
R:R:C109 R:R:I113 3.27 1 No No 9 7 2 2
R:R:C187 R:R:I113 3.27 1 Yes No 9 7 1 2
R:R:S168 R:R:V117 3.23 0 No No 8 8 2 1
L:L:?1 R:R:A93 3.09 1 Yes No 0 7 0 1
R:R:I385 R:R:N386 2.83 0 No No 6 7 2 1
R:R:A203 R:R:F362 2.77 0 No Yes 8 7 2 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
R:R:G53 W:W:?1 4.58 0 No Yes 9 0 1 0
R:R:V57 R:R:Y402 3.79 0 No Yes 9 6 2 1
R:R:I130 R:R:R134 5.01 2 No Yes 9 9 2 1
R:R:I130 R:R:Y400 6.04 2 No Yes 9 9 2 2
R:R:R134 R:R:Y215 5.14 2 Yes Yes 9 9 1 2
R:R:R134 R:R:Y400 4.12 2 Yes Yes 9 9 1 2
R:R:R134 W:W:?1 4.07 2 Yes Yes 9 0 1 0
R:R:I349 R:R:K345 5.82 0 No No 7 7 2 1
R:R:K345 W:W:?1 7.55 0 No Yes 7 0 1 0
R:R:T346 W:W:?1 5.92 0 No Yes 8 0 1 0
R:R:V398 R:R:Y402 3.79 2 No Yes 6 6 1 1
R:R:V398 W:W:?1 4.99 2 No Yes 6 0 1 0
R:R:F411 R:R:Y402 6.19 0 No Yes 8 6 2 1
R:R:Y402 W:W:?1 10.99 2 Yes Yes 6 0 1 0
R:R:F403 W:W:?1 41.58 0 No Yes 8 0 1 0
R:R:F407 R:R:N404 13.29 4 Yes No 8 9 2 1
R:R:N404 W:W:?1 5.52 0 No Yes 9 0 1 0
R:R:G53 R:R:L52 1.71 0 No No 9 4 1 2
R:R:K342 R:R:T346 1.5 0 No No 8 8 2 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 9DYE_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3.39
Number of Linked Nodes 263
Number of Links 274
Number of Hubs 31
Number of Links mediated by Hubs 123
Number of Communities 7
Number of Nodes involved in Communities 31
Number of Links involved in Communities 37
Path Summary
Number Of Nodes in MetaPath 80
Number Of Links MetaPath 79
Number of Shortest Paths 39135
Length Of Smallest Path 3
Average Path Length 13.1925
Length of Longest Path 32
Minimum Path Strength 1.355
Average Path Strength 6.20807
Maximum Path Strength 26.285
Minimum Path Correlation 0.7
Average Path Correlation 0.937342
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 5
Average % Of Corr. Nodes 55.4886
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 44.4995
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function• cation binding   • binding   • ion binding   • serotonin binding   • amine binding   • heterocyclic compound binding   • small molecule binding   • G protein-coupled amine receptor activity   • G protein-coupled serotonin receptor activity   • molecular transducer activity   • G protein-coupled receptor activity   • transmembrane signaling receptor activity   • signaling receptor activity   • Gi/o-coupled serotonin receptor activity   • neurotransmitter receptor activity   • serotonin receptor activity   • protein binding   • signaling receptor binding   • receptor-receptor interaction   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • cell communication   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction
Gene OntologyBiological Process• cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • cell communication   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction   • behavior   • multicellular organismal process   • exploration behavior   • regulation of amine metabolic process   • dopamine metabolic process   • primary metabolic process   • catechol-containing compound metabolic process   • regulation of primary metabolic process   • amine metabolic process   • catecholamine metabolic process   • phenol-containing compound metabolic process   • metabolic process   • regulation of catecholamine metabolic process   • regulation of metabolic process   • biogenic amine metabolic process   • regulation of dopamine metabolic process   • adult behavior   • regulation of tube diameter   • system process   • regulation of tube size   • regulation of system process   • circulatory system process   • regulation of blood circulation   • regulation of vasoconstriction   • vascular process in circulatory system   • regulation of multicellular organismal process   • blood vessel diameter maintenance   • regulation of biological quality   • blood circulation   • vasoconstriction   • regulation of anatomical structure size   • cell-cell signaling   • gamma-aminobutyric acid signaling pathway   • regulation of behavior   • serotonin metabolic process   • indole-containing compound metabolic process   • cellular response to nitrogen compound   • response to dopamine   • serotonin receptor signaling pathway   • cellular response to dopamine   • response to monoamine   • response to oxygen-containing compound   • response to nitrogen compound   • cellular response to oxygen-containing compound   • cellular response to chemical stimulus   • response to catecholamine   • cellular response to monoamine stimulus   • response to chemical   • cellular response to catecholamine stimulus   • cell population proliferation   • positive regulation of cell population proliferation   • regulation of cell population proliferation   • positive regulation of biological process   • positive regulation of cellular process   • regulation of localization   • regulation of hormone secretion   • transport   • hormone secretion   • localization   • regulation of secretion by cell   • secretion by cell   • signal release   • regulation of signaling   • regulation of transport   • secretion   • regulation of hormone levels   • export from cell   • establishment of localization   • regulation of secretion   • regulation of cell communication   • hormone transport   • monoamine transport   • nitrogen compound transport   • organic hydroxy compound transport   • monoatomic ion transport   • serotonin secretion   • regulation of monoatomic ion transport   • regulation of serotonin secretion   • serotonin transport   • trans-synaptic signaling   • synaptic signaling   • anterograde trans-synaptic signaling   • chemical synaptic transmission   • behavioral defense response   • fear response   • behavioral fear response   • defense response   • response to stress   • multicellular organismal response to stress   • G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger   • cell periphery   • cellular anatomical structure   • plasma membrane   • membrane   • somatodendritic compartment   • cell projection   • dendrite   • dendritic tree   • neuron projection   • plasma membrane bounded cell projection   • synapse   • cell junction   • protein binding   • binding   • G-protein beta-subunit binding   • fibroblast proliferation   • adenylate cyclase-activating dopamine receptor signaling pathway   • G protein-coupled dopamine receptor signaling pathway   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • response to ketone   • response to prostaglandin   • response to lipid   • response to endogenous stimulus   • response to alcohol   • cellular response to prostaglandin stimulus   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to alcohol   • response to hormone   • cellular response to lipid   • response to prostaglandin E   • cellular response to ketone   • cellular response to hormone stimulus   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cytoplasmic side of plasma membrane   • GTPase complex   • extrinsic component of membrane   • extrinsic component of cytoplasmic side of plasma membrane   • extracellular exosome   • membrane-bounded organelle   • extracellular vesicle   • extracellular organelle   • extracellular region   • organelle   • extracellular space   • vesicle   • extracellular membrane-bounded organelle   • enzyme binding   • GTPase binding   • protein-containing complex binding   • pyrophosphatase activity   • GTPase activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • signaling receptor complex adaptor activity   • protein-macromolecule adaptor activity   • molecular adaptor activity   • signaling adaptor activity   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of taste   • developmental process   • sensory organ development   • eye development   • animal organ development   • retina development in camera-type eye   • visual system development   • multicellular organism development   • camera-type eye development   • anatomical structure development   • sensory system development   • system development   • small GTPase-mediated signal transduction   • Ras protein signal transduction   • intracellular signal transduction   • intracellular signaling cassette   • phospholipase C-activating G protein-coupled receptor signaling pathway   • cellular response to acetylcholine   • acetylcholine receptor signaling pathway   • postsynaptic signal transduction   • G protein-coupled acetylcholine receptor signaling pathway   • response to acetylcholine   • non-motile cilium   • 9+0 non-motile cilium   • cilium   • photoreceptor disc membrane   • photoreceptor outer segment   • photoreceptor cell cilium   • organelle membrane   • intracellular anatomical structure   • cytoplasm   • cytosol   • vacuolar membrane   • lytic vacuole   • vacuole   • intracellular membrane-bounded organelle   • intracellular organelle   • lytic vacuole membrane   • bounding membrane of organelle   • lysosomal membrane   • lysosome   • mu-type opioid receptor binding   • signaling receptor binding   • G protein-coupled receptor binding   • opioid receptor binding   • guanyl nucleotide binding   • GTP binding   • nucleotide binding   • guanyl ribonucleotide binding   • purine ribonucleotide binding   • purine ribonucleoside triphosphate binding   • nucleoside phosphate binding   • ion binding   • purine nucleotide binding   • anion binding   • heterocyclic compound binding   • carbohydrate derivative binding   • ribonucleotide binding   • small molecule binding   • peptide hormone receptor binding   • corticotropin-releasing hormone receptor binding   • corticotropin-releasing hormone receptor 1 binding   • hormone receptor binding   • neuropeptide receptor binding   • G protein-coupled serotonin receptor binding   • G-protein beta/gamma-subunit complex binding   • G protein activity   • molecular function regulator activity   • cation binding   • metal ion binding   • heart process   • regulation of heart contraction   • heart contraction   • locomotory behavior   • membrane docking   • vesicle-mediated transport   • organelle localization by membrane tethering   • exocytosis   • organelle localization   • vesicle docking   • exocytic process   • vesicle docking involved in exocytosis   • negative regulation of protein transport   • establishment of protein localization   • negative regulation of biological process   • negative regulation of transport   • negative regulation of secretion   • negative regulation of hormone secretion   • negative regulation of secretion by cell   • intracellular protein localization   • regulation of peptide hormone secretion   • negative regulation of peptide hormone secretion   • establishment of protein localization to extracellular region   • negative regulation of establishment of protein localization   • protein secretion   • regulation of protein secretion   • negative regulation of protein secretion   • regulation of protein localization   • regulation of peptide secretion   • negative regulation of signaling   • negative regulation of cell communication   • protein localization to extracellular region   • negative regulation of peptide secretion   • peptide secretion   • negative regulation of cellular process   • negative regulation of protein localization   • regulation of peptide transport   • regulation of establishment of protein localization   • regulation of protein transport   • peptide transport   • negative regulation of insulin secretion   • protein transport   • regulation of insulin secretion   • peptide hormone secretion   • macromolecule localization   • insulin secretion   • modulation of chemical synaptic transmission   • regulation of trans-synaptic signaling   • postsynaptic modulation of chemical synaptic transmission   • muscle contraction   • muscle system process   • postsynapse   • postsynaptic membrane   • plasma membrane region   • synaptic membrane   • parallel fiber to Purkinje cell synapse   • excitatory synapse   • presynapse   • presynaptic membrane   • GABA-ergic synapse   • glutamatergic synapse   • cell body
Gene OntologyCellular Component
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeYLX
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodeYLX
NameBuspirone
SynonymsBuspironum
Identifier
FormulaC21 H31 N5 O2
Molecular Weight385.503
SMILES
PubChem2477
Formal Charge0
Total Atoms59
Total Chiral Atoms0
Total Bonds62
Total Aromatic Bonds6

CodeJ40
PDB ResiduesW:W:?1
Environment DetailsOpen EMBL-EBI Page
CodeJ40
Name[(2R)-1-[oxidanyl-[(2R,3R,5S,6R)-2,3,5,6-tetrakis(oxidanyl)-4-phosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-3-tetradecanoyloxy-propan-2-yl] (5E,8E)-hexadeca-5,8,11,14-tetraenoate
Synonyms
Identifier
FormulaC39 H68 O16 P2
Molecular Weight854.895
SMILES
PubChem
Formal Charge0
Total Atoms125
Total Chiral Atoms5
Total Bonds125
Total Aromatic Bonds0

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP08908
Sequence
>9DYE_nogp_Chain_R
YQVITSLLL GTLIFCAVL GNACVVAAI ALERSLQNV ANYLIGSLA 
VTDLMVSVL VLPMAALYQ VLNKWTLGQ VTCDLFIAL DVLCCTSSI 
HLCAIALDR YWAITDPID YVNKRTPRR AAALISLTW LIGFLISIP 
PMLGWRTPE DRSDPDACT ISKDHGYTI YSTFGAFYI PLLLMLVLY 
GRIFRAARF RIRKNERNA EAKRKMALA RERKTVKTL GIIMGTFIL 
CWLPFFIVA LVLPFCESS CHMPTLLGA IINWLGYSN SLLNPVIYA 
YFNKDFQNA FKKIIW


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
7E2XAAmine5-Hydroxytryptamine5-HT1AHomo sapiens-PtdIns4PGi1/β1/γ232021-04-14doi.org/10.1038/s41586-021-03376-8
7E2X (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiens-PtdIns4P32021-04-14doi.org/10.1038/s41586-021-03376-8
7E2YAAmine5-Hydroxytryptamine5-HT1AHomo sapiensSerotoninPtdIns4PGi1/β1/γ232021-04-14doi.org/10.1038/s41586-021-03376-8
7E2Y (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensSerotoninPtdIns4P32021-04-14doi.org/10.1038/s41586-021-03376-8
7E2ZAAmine5-Hydroxytryptamine5-HT1AHomo sapiensAripiprazolePtdIns4PGi1/β1/γ23.12021-04-14doi.org/10.1038/s41586-021-03376-8
7E2Z (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensAripiprazolePtdIns4P3.12021-04-14doi.org/10.1038/s41586-021-03376-8
8JSPAAmine5-Hydroxytryptamine5-HT1AHomo sapiensUlotaront-Gi1/β1/γ23.652023-11-15doi.org/10.1038/s41586-023-06804-z
8JSP (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensUlotaront-3.652023-11-15doi.org/10.1038/s41586-023-06804-z
8W8BAAmine5-Hydroxytryptamine5-HT1AHomo sapiensSEP-363856-Gi1/β1/γ232023-11-22doi.org/10.1038/s41586-023-06775-1
8W8B (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensSEP-363856-32023-11-22doi.org/10.1038/s41586-023-06775-1
8FY8AAmine5-Hydroxytryptamine5-HT1AHomo sapiens5-MeO-DMTPtdIns4PGi1/β1/γ12.792024-05-15doi.org/10.1038/s41586-024-07403-2
8FY8 (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiens5-MeO-DMTPtdIns4P2.792024-05-15doi.org/10.1038/s41586-024-07403-2
8FYEAAmine5-Hydroxytryptamine5-HT1AHomo sapiens4-F,5-MeO-PyrTPtdIns4PGi1/β1/γ12.852024-05-15doi.org/10.1038/s41586-024-07403-2
8FYE (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiens4-F,5-MeO-PyrTPtdIns4P2.852024-05-15doi.org/10.1038/s41586-024-07403-2
8FYLAAmine5-Hydroxytryptamine5-HT1AHomo sapiensVilazodonePtdIns4PGi1/β1/γ12.942024-05-15doi.org/10.1038/s41586-024-07403-2
8FYL (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensVilazodonePtdIns4P2.942024-05-15doi.org/10.1038/s41586-024-07403-2
8FYTAAmine5-Hydroxytryptamine5-HT1AHomo sapiensLSDPtdIns4PGi1/β1/γ12.642024-05-15doi.org/10.1038/s41586-024-07403-2
8FYT (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensLSDPtdIns4P2.642024-05-15doi.org/10.1038/s41586-024-07403-2
8FYXAAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspironePtdIns4PGi1/β1/γ12.722024-05-15doi.org/10.1038/s41586-024-07403-2
8FYX (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspironePtdIns4P2.722024-05-15doi.org/10.1038/s41586-024-07403-2
8PJKAAmine5-Hydroxytryptamine5-HT1AHomo sapiensST171-Gi1/β1/γ12.42024-05-29doi.org/10.1126/sciadv.adv9267
8PJK (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensST171-2.42024-05-29doi.org/10.1126/sciadv.adv9267
8PKMAAmine5-Hydroxytryptamine5-HT1AHomo sapiensBefiradol-Gi1/β1/γ12.92024-05-29doi.org/10.1126/sciadv.adv9267
8PKM (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBefiradol-2.92024-05-29doi.org/10.1126/sciadv.adv9267
8JT6AAmine5-Hydroxytryptamine5-HT1AHomo sapiens(R)-IHCH-7179PtdIns4PGi1/β1/γ232024-02-28doi.org/10.1016/j.cell.2024.02.034
8JT6 (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiens(R)-IHCH-7179PtdIns4P32024-02-28doi.org/10.1016/j.cell.2024.02.034
9GL2AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBefiradol-Gs/β1/γ23.22025-07-02doi.org/10.1126/sciadv.adv9267
9GL2 (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBefiradol-3.22025-07-02doi.org/10.1126/sciadv.adv9267
9DYDAAmine5-Hydroxytryptamine5-HT1AHomo sapiensAsenapinePtdIns4PGo/β1/γ22.962025-08-13doi.org/10.1126/sciadv.adu9851
9DYD (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensAsenapinePtdIns4P2.962025-08-13doi.org/10.1126/sciadv.adu9851
9DYEAAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspironePtdIns4PGo/β1/γ22.92025-08-13doi.org/10.1126/sciadv.adu9851
9DYE (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspironePtdIns4P2.92025-08-13doi.org/10.1126/sciadv.adu9851
9DYFAAmine5-Hydroxytryptamine5-HT1AHomo sapiensAsenapinePtdIns4PGi1/β1/γ22.742025-08-13doi.org/10.1126/sciadv.adu9851
9DYF (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensAsenapinePtdIns4P2.742025-08-13doi.org/10.1126/sciadv.adu9851
9MD1AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspironePtdIns4PGz/β1/γ23.032025-08-13doi.org/10.1126/sciadv.adu9851
9MD1 (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspironePtdIns4P3.032025-08-13doi.org/10.1126/sciadv.adu9851
9VJ5AAmine5-Hydroxytryptamine5-HT1AHomo sapiensGepirone-Go/β1/γ22.692025-11-12To be published
9VJ5 (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensGepirone-2.692025-11-12To be published
9VJ6AAmine5-Hydroxytryptamine5-HT1AHomo sapiensF-15599-Gi3/β1/γ22.622025-11-12To be published
9VJ6 (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensF-15599-2.622025-11-12To be published
9VJEAAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspirone-Go/β1/γ22.472025-11-12To be published
9VJE (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspirone-2.472025-11-12To be published
9VJFAAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspirone-Gi3/β1/γ22.72025-11-12To be published
9VJF (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspirone-2.72025-11-12To be published
9VJGAAmine5-Hydroxytryptamine5-HT1AHomo sapiens8-OH-DPAT-chim(NtGi2-Gz)/β1/γ22.672025-11-12To be published
9VJG (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiens8-OH-DPAT-2.672025-11-12To be published
9VMYAAmine5-Hydroxytryptamine5-HT1AHomo sapiensTMU4142-Go/β1/γ22.862025-11-12To be published
9VMY (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensTMU4142-2.862025-11-12To be published
9VNFAAmine5-Hydroxytryptamine5-HT1AHomo sapiensPindolol-Go/β1/γ22.742025-11-12To be published
9VNF (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensPindolol-2.742025-11-12To be published
9KVGAAmine5-Hydroxytryptamine5-HT1AHomo sapiens5-MeO-DMTPtdIns4PGi1/β1/γ22.632025-12-03To be published
9KVG (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiens5-MeO-DMTPtdIns4P2.632025-12-03To be published
9KVHAAmine5-Hydroxytryptamine5-HT1AHomo sapiensCinobufoteninePtdIns4PGi1/β1/γ22.592025-12-03To be published
9KVH (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensCinobufoteninePtdIns4P2.592025-12-03To be published
9KVIAAmine5-Hydroxytryptamine5-HT1AHomo sapiensBufoteninPtdIns4PGi1/β1/γ22.542025-12-03To be published
9KVI (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBufoteninPtdIns4P2.542025-12-03To be published
9HYIAAmine5-Hydroxytryptamine5-HT1AHomo sapiensDP81-Gi1/β1/γ22.32026-01-21To be published
9HYI (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensDP81-2.32026-01-21To be published




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 9DYE_nogp.zip



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