Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:L43 4.2575407
2R:R:N54 5.34409
3R:R:L67 3.7925408
4R:R:L78 7.2419
5R:R:T81 6.515419
6R:R:D82 7.804519
7R:R:Y96 4.57416
8R:R:W102 8.274519
9R:R:D116 10.53418
10R:R:H126 7.54571718
11R:R:Y135 5.404509
12R:R:R148 7.5675428
13R:R:R152 8.4575427
14R:R:W161 8.328519
15R:R:W175 6.71667606
16R:R:C187 7.8525419
17R:R:F204 8.826508
18R:R:Y205 6.2325407
19R:R:P207 6.015409
20R:R:M211 4.648519
21R:R:Y215 4.72333619
22R:R:I226 3.0325406
23R:R:F354 5.066519
24R:R:W358 7.4925818
25R:R:F361 9.2275418
26R:R:F362 10.584517
27R:R:L368 2.655404
28R:R:F370 4.2525405
29R:R:W387 5.16418
30R:R:Y390 7.548518
31R:R:L394 2.2225407
32R:R:Y400 5.964509
33R:R:Y402 4.985406
34R:R:F407 4.86833608
35L:L:?1 7.998461310
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:L43 R:R:T39 11.10442.95YesNo075
2R:R:L43 R:R:W387 18.28027.97YesYes078
3R:R:A401 R:R:V57 11.55673.39NoNo089
4R:R:A401 R:R:P397 35.64991.87NoNo089
5R:R:N54 R:R:P397 36.99763.26YesNo099
6R:R:D82 R:R:N54 52.75.39YesYes099
7R:R:D82 R:R:S393 11.64718.83YesNo099
8R:R:S393 R:R:V85 11.18288.08NoNo098
9R:R:V85 R:R:V89 11.48433.21NoNo088
10R:R:D116 R:R:V89 12.91658.76YesNo088
11R:R:W387 R:R:Y390 23.30034.82YesYes188
12R:R:A50 R:R:S86 10.35973.42NoNo088
13R:R:N54 R:R:S86 11.8164.47YesNo098
14R:R:A401 R:R:F407 22.98974.16NoYes088
15R:R:C120 R:R:W358 29.27015.22NoYes178
16R:R:F354 R:R:W358 63.1354.01YesYes198
17R:R:F354 R:R:M211 92.55286.22YesYes199
18R:R:M211 R:R:Y215 1003.59YesYes199
19R:R:I218 R:R:Y215 53.07083.63NoYes099
20R:R:I218 R:R:Y135 51.18343.63NoYes099
21R:R:W136 R:R:Y135 45.73524.82NoYes059
22R:R:R152 R:R:W136 41.866911YesNo075
23R:R:D133 R:R:R152 20.13757.15NoYes297
24R:R:D133 R:R:L74 18.34054.07NoNo098
25R:R:A153 R:R:L74 12.28033.15NoNo078
26L:L:?1 R:R:Y390 24.587710.4YesYes108
27L:L:?1 R:R:C120 22.09735.03YesNo107
28L:L:?1 R:R:F361 22.163616.2YesYes108
29R:R:F361 R:R:W358 22.53754.01YesYes188
30L:L:?1 R:R:F362 52.37747.72YesYes107
31R:R:F362 R:R:W358 42.70817.02YesYes178
32R:R:F204 R:R:F362 30.448920.36YesYes087
33R:R:F204 R:R:F354 50.31816.43YesYes089
34R:R:S168 R:R:V117 11.6323.23NoNo088
35L:L:?1 R:R:V117 13.2188.49YesNo008
36R:R:D82 R:R:L78 23.26116.79YesYes199
37R:R:N392 R:R:W358 29.758513.56NoYes198
38R:R:N392 R:R:N396 29.016812.26NoNo199
39R:R:F354 R:R:L127 15.71443.65YesNo198
40R:R:L127 R:R:Y400 26.67118.21NoYes089
41L:L:?1 R:R:Y96 35.36055.2YesYes106
42R:R:W102 R:R:Y96 20.68027.72YesYes196
43R:R:L104 R:R:W102 26.33049.11NoYes079
44L:L:?1 R:R:C187 24.17167.04YesYes109
45R:R:C187 R:R:W102 20.559613.06YesYes199
46R:R:L104 R:R:T103 15.07821.47NoNo075
47R:R:A186 R:R:Y96 13.231.33NoYes046
48R:R:T108 R:R:W102 11.34863.64NoYes069
49R:R:I130 R:R:Y400 13.21497.25NoYes099
50R:R:R134 R:R:Y215 13.14266.17NoYes099
51R:R:R148 R:R:R152 14.09538.53YesYes287
52R:R:R148 R:R:Y144 10.248114.4YesNo088
53R:R:R176 R:R:W175 27.34959NoYes066
54R:R:H193 R:R:R176 28.81185.64NoNo046
55R:R:F370 R:R:H193 30.2684.53YesNo054
56R:R:F370 R:R:L366 47.70714.87YesNo057
57R:R:L366 R:R:T200 48.76538.84NoNo077
58R:R:F362 R:R:T200 41.92123.89YesNo077
59R:R:W175 R:R:Y198 10.866211.58YesNo065
60R:R:F370 R:R:T196 28.71532.59YesNo057
61R:R:P369 R:R:T196 27.25310.49NoNo077
62R:R:K191 R:R:P369 12.39485.02NoNo057
63R:R:F201 R:R:Y205 13.19386.19NoYes057
64R:R:T200 R:R:Y205 14.12258.74NoYes077
65R:R:F204 R:R:Y205 27.57265.16YesYes087
66R:R:F201 R:R:I197 11.96073.77NoNo057
67R:R:F370 R:R:I197 11.11655.02YesNo057
68R:R:L347 R:R:Y215 53.06784.69NoYes089
69R:R:F219 R:R:L347 10.24813.65NoNo068
70R:R:L347 R:R:T343 41.54432.95NoNo088
71R:R:I226 R:R:T343 37.80561.52YesNo068
72R:R:I226 R:R:R339 14.29436.26YesNo067
73R:R:E340 R:R:L337 10.24811.33NoNo085
74R:R:E340 R:R:I226 14.29432.73NoYes086
75R:R:M335 R:R:R339 12.27736.2NoNo047
76R:R:K332 R:R:M335 10.24514.32NoNo064
77R:R:L368 R:R:P369 13.8211.64YesNo047
78R:R:D82 R:R:N396 26.25212.12YesNo199
79R:R:L78 R:R:Y400 25.2484.69YesYes099
80R:R:I130 R:R:R134 11.8196.26NoNo099
81R:R:L127 R:R:M211 12.39184.24NoYes189
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
R:R:D116 R:R:V89 8.76 1 Yes No 8 8 1 2
R:R:L90 R:R:W387 4.56 1 No Yes 8 8 2 2
R:R:L90 R:R:Y390 7.03 1 No Yes 8 8 2 1
R:R:A93 R:R:Y390 4 1 No Yes 7 8 1 1
L:L:?1 R:R:A93 3.99 1 Yes No 0 7 0 1
R:R:W102 R:R:Y96 7.72 1 Yes Yes 9 6 2 1
R:R:C187 R:R:Y96 4.03 1 Yes Yes 9 6 1 1
L:L:?1 R:R:Y96 5.2 1 Yes Yes 0 6 0 1
R:R:C109 R:R:W102 7.84 1 No Yes 9 9 2 2
R:R:C187 R:R:W102 13.06 1 Yes Yes 9 9 1 2
R:R:C109 R:R:C187 7.28 1 No Yes 9 9 2 1
L:L:?1 R:R:I113 9.04 1 Yes No 0 7 0 1
R:R:C120 R:R:D116 4.67 1 No Yes 7 8 1 1
R:R:D116 R:R:Y390 11.49 1 Yes Yes 8 8 1 1
L:L:?1 R:R:D116 17.2 1 Yes Yes 0 8 0 1
R:R:S168 R:R:V117 3.23 0 No No 8 8 2 1
L:L:?1 R:R:V117 8.49 1 Yes No 0 8 0 1
R:R:C120 R:R:W358 5.22 1 No Yes 7 8 1 2
L:L:?1 R:R:C120 5.03 1 Yes No 0 7 0 1
R:R:A203 R:R:T121 3.36 0 No No 8 8 1 2
L:L:?1 R:R:C187 7.04 1 Yes Yes 0 9 0 1
L:L:?1 R:R:I189 6.33 1 Yes No 0 6 0 1
R:R:F362 R:R:T200 3.89 1 Yes No 7 7 1 2
R:R:F204 R:R:F362 20.36 0 Yes Yes 8 7 2 1
R:R:F361 R:R:W358 4.01 1 Yes Yes 8 8 1 2
R:R:F362 R:R:W358 7.02 1 Yes Yes 7 8 1 2
R:R:F361 R:R:F362 13.93 1 Yes Yes 8 7 1 1
L:L:?1 R:R:F361 16.2 1 Yes Yes 0 8 0 1
L:L:?1 R:R:F362 7.72 1 Yes Yes 0 7 0 1
L:L:?1 R:R:N386 4.35 1 Yes No 0 7 0 1
R:R:W387 R:R:Y390 4.82 1 Yes Yes 8 8 2 1
L:L:?1 R:R:Y390 10.4 1 Yes Yes 0 8 0 1
L:L:?1 R:R:A203 2.99 1 Yes No 0 8 0 1
R:R:A365 R:R:F361 2.77 0 No Yes 8 8 2 1
R:R:A186 R:R:Y96 1.33 0 No Yes 4 6 2 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 9GL2_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3.15
Number of Linked Nodes 271
Number of Links 301
Number of Hubs 35
Number of Links mediated by Hubs 142
Number of Communities 2
Number of Nodes involved in Communities 35
Number of Links involved in Communities 54
Path Summary
Number Of Nodes in MetaPath 82
Number Of Links MetaPath 81
Number of Shortest Paths 76139
Length Of Smallest Path 3
Average Path Length 13.2032
Length of Longest Path 28
Minimum Path Strength 1.23333
Average Path Strength 5.9037
Maximum Path Strength 21.435
Minimum Path Correlation 0.7
Average Path Correlation 0.941312
Maximum Path Correlation 1
Minimum % Of Corr. Nodes 5.88235
Average % Of Corr. Nodes 54.9724
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 48.0172
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function• binding   • guanyl nucleotide binding   • GTP binding   • nucleotide binding   • guanyl ribonucleotide binding   • purine ribonucleotide binding   • purine ribonucleoside triphosphate binding   • nucleoside phosphate binding   • ion binding   • purine nucleotide binding   • anion binding   • heterocyclic compound binding   • carbohydrate derivative binding   • ribonucleotide binding   • small molecule binding   • D1 dopamine receptor binding   • protein binding   • signaling receptor binding   • G protein-coupled receptor binding   • dopamine receptor binding   • protein-containing complex binding   • G-protein beta/gamma-subunit complex binding   • pyrophosphatase activity   • GTPase activity   • G protein activity   • ribonucleoside triphosphate phosphatase activity   • molecular function regulator activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • enzyme regulator activity   • cyclase regulator activity   • enzyme activator activity   • cyclase activator activity   • molecular function activator activity   • adenylate cyclase regulator activity   • adenylate cyclase activator activity   • cation binding   • metal ion binding   • developmental process   • multicellular organismal process   • epithelium development   • ectodermal placode morphogenesis   • epidermis development   • molting cycle process   • hair cycle   • animal organ development   • hair follicle placode formation   • tissue development   • ectodermal placode formation   • anatomical structure morphogenesis   • skin development   • skin epidermis development   • hair follicle development
Gene OntologyBiological Process• developmental process   • multicellular organismal process   • epithelium development   • ectodermal placode morphogenesis   • epidermis development   • molting cycle process   • hair cycle   • animal organ development   • hair follicle placode formation   • tissue development   • ectodermal placode formation   • anatomical structure morphogenesis   • skin development   • skin epidermis development   • hair follicle development   • molting cycle   • anatomical structure development   • anatomical structure formation involved in morphogenesis   • ectodermal placode development   • hair cycle process   • system process   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of smell   • cellular response to stimulus   • cellular response to nitrogen compound   • response to stimulus   • response to endogenous stimulus   • response to peptide hormone   • cellular response to peptide hormone stimulus   • response to oxygen-containing compound   • response to nitrogen compound   • response to glucagon   • cellular response to oxygen-containing compound   • cellular response to glucagon stimulus   • cellular response to endogenous stimulus   • cellular response to chemical stimulus   • response to hormone   • response to chemical   • cellular process   • cellular response to hormone stimulus   • multicellular organism development   • skeletal system development   • bone development   • system development   • regulation of body fluid levels   • wound healing   • homotypic cell-cell adhesion   • cell activation   • hemostasis   • biological regulation   • platelet aggregation   • blood coagulation   • cell adhesion   • cell-cell adhesion   • response to stress   • coagulation   • regulation of biological quality   • response to wounding   • platelet activation   • response to fluid shear stress   • vascular endothelial cell response to laminar fluid shear stress   • response to laminar fluid shear stress   • cellular response to stress   • cellular response to laminar fluid shear stress   • vascular endothelial cell response to fluid shear stress   • cellular response to fluid shear stress   • cognition   • developmental growth   • growth   • response to ketone   • response to prostaglandin   • response to lipid   • response to alcohol   • cellular response to prostaglandin stimulus   • cellular response to prostaglandin E stimulus   • cellular response to alcohol   • cellular response to lipid   • response to prostaglandin E   • cellular response to ketone   • regulation of biological process   • regulation of cellular process   • signaling   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cell communication   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • signal transduction   • homeostatic process   • positive regulation of biological process   • adaptive thermogenesis   • positive regulation of metabolic process   • multicellular organismal-level homeostasis   • regulation of cold-induced thermogenesis   • cold-induced thermogenesis   • temperature homeostasis   • positive regulation of cold-induced thermogenesis   • positive regulation of multicellular organismal process   • metabolic process   • regulation of multicellular organismal process   • regulation of metabolic process   • positive regulation of cellular process   • regulation of localization   • establishment of protein localization   • nitrogen compound transport   • regulation of hormone secretion   • regulation of protein localization   • regulation of peptide secretion   • transport   • hormone secretion   • protein localization to extracellular region   • localization   • peptide secretion   • regulation of secretion by cell   • secretion by cell   • amide transport   • signal release   • intracellular protein localization   • regulation of peptide hormone secretion   • regulation of signaling   • regulation of transport   • secretion   • regulation of hormone levels   • regulation of peptide transport   • regulation of establishment of protein localization   • establishment of protein localization to extracellular region   • export from cell   • cell-cell signaling   • regulation of protein transport   • protein secretion   • establishment of localization   • regulation of protein secretion   • regulation of secretion   • peptide transport   • protein transport   • regulation of insulin secretion   • peptide hormone secretion   • macromolecule localization   • hormone transport   • regulation of cell communication   • insulin secretion   • adenylate cyclase-activating adrenergic receptor signaling pathway   • adrenergic receptor signaling pathway   • cellular localization   • establishment of localization in cell   • intracellular transport   • regulation of defense response   • regulation of response to external stimulus   • negative regulation of inflammatory response   • negative regulation of biological process   • inflammatory response to antigenic stimulus   • regulation of response to stress   • regulation of immune system process   • negative regulation of inflammatory response to antigenic stimulus   • defense response   • immune response   • negative regulation of response to stimulus   • negative regulation of immune response   • regulation of inflammatory response to antigenic stimulus   • response to external stimulus   • regulation of inflammatory response   • regulation of response to stimulus   • negative regulation of immune system process   • immune system process   • negative regulation of response to external stimulus   • negative regulation of defense response   • regulation of immune response   • inflammatory response   • positive regulation of adenylate cyclase activity   • positive regulation of molecular function   • regulation of molecular function   • positive regulation of cyclase activity   • activation of adenylate cyclase activity   • regulation of adenylate cyclase activity   • regulation of catalytic activity   • positive regulation of catalytic activity   • positive regulation of lyase activity   • response to dopamine   • cellular response to dopamine   • response to monoamine   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • G protein-coupled dopamine receptor signaling pathway   • cellular response to monoamine stimulus   • renal system process   • chemical homeostasis   • multicellular organismal-level water homeostasis   • multicellular organismal-level chemical homeostasis   • renal water homeostasis   • cellular anatomical structure   • membrane   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • plasma membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cell periphery   • cytoplasmic side of plasma membrane   • GTPase complex
Gene OntologyCellular Component• cellular anatomical structure   • membrane   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • plasma membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cell periphery   • cytoplasmic side of plasma membrane   • GTPase complex   • extrinsic component of membrane   • extrinsic component of cytoplasmic side of plasma membrane   • extracellular exosome   • membrane-bounded organelle   • extracellular vesicle   • extracellular organelle   • extracellular region   • organelle   • extracellular space   • vesicle   • extracellular membrane-bounded organelle   • intracellular anatomical structure   • cytoplasm   • cytosol   • Golgi apparatus subcompartment   • Golgi apparatus   • organelle subcompartment   • trans-Golgi network membrane   • intracellular membrane-bounded organelle   • endomembrane system   • intracellular organelle   • trans-Golgi network   • organelle membrane   • protein binding   • binding   • enzyme binding   • GTPase binding   • protein-containing complex binding   • pyrophosphatase activity   • GTPase activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • signaling receptor complex adaptor activity   • protein-macromolecule adaptor activity   • molecular adaptor activity   • signaling adaptor activity   • multicellular organismal process   • system process   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of taste   • developmental process   • sensory organ development   • eye development   • animal organ development   • retina development in camera-type eye   • visual system development   • multicellular organism development   • camera-type eye development   • anatomical structure development   • sensory system development   • system development   • cell population proliferation   • cellular process   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • signal transduction   • cell communication   • response to ketone   • response to prostaglandin   • response to lipid   • response to endogenous stimulus   • response to alcohol   • cellular response to prostaglandin stimulus   • response to oxygen-containing compound   • cellular response to oxygen-containing compound   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to chemical stimulus   • cellular response to alcohol   • response to hormone   • response to chemical   • cellular response to lipid   • response to prostaglandin E   • cellular response to ketone   • cellular response to hormone stimulus   • small GTPase-mediated signal transduction   • Ras protein signal transduction   • intracellular signal transduction   • intracellular signaling cassette   • phospholipase C-activating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular response to nitrogen compound   • response to dopamine   • cellular response to dopamine   • response to monoamine   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • G protein-coupled dopamine receptor signaling pathway   • response to nitrogen compound   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cellular response to monoamine stimulus   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • synaptic signaling   • cellular response to acetylcholine   • cell-cell signaling   • acetylcholine receptor signaling pathway   • postsynaptic signal transduction   • G protein-coupled acetylcholine receptor signaling pathway   • response to acetylcholine   • non-motile cilium   • 9+0 non-motile cilium   • cilium   • neuron projection   • photoreceptor disc membrane   • photoreceptor outer segment   • plasma membrane bounded cell projection   • cell projection   • photoreceptor cell cilium   • vacuolar membrane   • lytic vacuole   • vacuole   • lytic vacuole membrane   • bounding membrane of organelle   • lysosomal membrane   • lysosome   • synapse   • cell junction   • cation binding   • ion binding   • serotonin binding   • amine binding   • heterocyclic compound binding   • small molecule binding   • G protein-coupled amine receptor activity   • G protein-coupled serotonin receptor activity   • molecular transducer activity   • G protein-coupled receptor activity   • transmembrane signaling receptor activity   • signaling receptor activity   • Gi/o-coupled serotonin receptor activity   • neurotransmitter receptor activity   • serotonin receptor activity   • signaling receptor binding   • receptor-receptor interaction   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • behavior   • exploration behavior   • regulation of amine metabolic process   • dopamine metabolic process   • primary metabolic process   • catechol-containing compound metabolic process   • regulation of primary metabolic process   • amine metabolic process   • catecholamine metabolic process   • phenol-containing compound metabolic process   • metabolic process   • regulation of catecholamine metabolic process   • regulation of metabolic process   • biogenic amine metabolic process   • regulation of dopamine metabolic process   • regulation of tube diameter   • regulation of tube size   • regulation of system process   • circulatory system process   • regulation of blood circulation   • regulation of vasoconstriction   • vascular process in circulatory system   • regulation of multicellular organismal process   • blood vessel diameter maintenance   • regulation of biological quality   • blood circulation   • vasoconstriction   • regulation of anatomical structure size   • gamma-aminobutyric acid signaling pathway   • regulation of behavior   • serotonin metabolic process   • indole-containing compound metabolic process   • serotonin receptor signaling pathway   • positive regulation of cell population proliferation   • regulation of cell population proliferation   • positive regulation of biological process   • positive regulation of cellular process   • regulation of localization   • regulation of hormone secretion   • transport   • hormone secretion   • localization   • regulation of secretion by cell   • secretion by cell   • signal release   • regulation of signaling   • regulation of transport   • secretion   • regulation of hormone levels   • export from cell   • establishment of localization   • regulation of secretion   • regulation of cell communication   • hormone transport   • monoamine transport   • nitrogen compound transport   • organic hydroxy compound transport   • monoatomic ion transport   • serotonin secretion   • regulation of monoatomic ion transport   • regulation of serotonin secretion   • serotonin transport   • trans-synaptic signaling   • anterograde trans-synaptic signaling   • chemical synaptic transmission   • behavioral defense response   • fear response   • behavioral fear response   • defense response   • response to stress   • multicellular organismal response to stress   • G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger   • somatodendritic compartment   • dendrite   • dendritic tree   • G-protein beta-subunit binding   • fibroblast proliferation
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeZKV
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodeZKV
NameBefiradol
Synonyms
  • (3-chloro-4-fluorophenyl)(4-fluoro-4-((((5-methylpyridin-2-yl)methyl)amino)methyl)piperidin-1-yl)methanone
  • Befiradol
  • (2E)-2-butenedioate
  • 4-piperidinemethanamine
Identifier
FormulaC20 H22 Cl F2 N3 O
Molecular Weight393.858
SMILES
PubChem9865384
Formal Charge0
Total Atoms49
Total Chiral Atoms0
Total Bonds51
Total Aromatic Bonds12

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP08908
Sequence
>9GL2_nogp_Chain_R
SYQVITSLL LGTLIFCAV LGNACVVAA IALERSLQN VANYLIGSL 
AVTDLMVSV LVLPMAALY QVLNKWTLG QVTCDLFIA LDVLCCTSS 
IHLCAIALD RYWAITDPI DYVNKRTPR RAAALISLT WLIGFLISI 
PPMLGWRTP EDRSDPDAC TISKDHGYT IYSTFGAFY IPLLLMLVL 
YGRIFRAAR FRIRKTVKK VNERNAEAK RKMALARER KTVKTLGII 
MGTFILCWL PFFIVALVL PFCESSCHM PTLLGAIIN WLGYSNSLL 
NPVIYAYFN KDFQNAFKK IIW


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
7E2XAAmine5-Hydroxytryptamine5-HT1AHomo sapiens--Gi1/β1/γ232021-04-14doi.org/10.1038/s41586-021-03376-8
7E2X (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiens--32021-04-14doi.org/10.1038/s41586-021-03376-8
7E2YAAmine5-Hydroxytryptamine5-HT1AHomo sapiensSerotonin-Gi1/β1/γ232021-04-14doi.org/10.1038/s41586-021-03376-8
7E2Y (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensSerotonin-32021-04-14doi.org/10.1038/s41586-021-03376-8
7E2ZAAmine5-Hydroxytryptamine5-HT1AHomo sapiensAripiprazole-Gi1/β1/γ23.12021-04-14doi.org/10.1038/s41586-021-03376-8
7E2Z (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensAripiprazole-3.12021-04-14doi.org/10.1038/s41586-021-03376-8
8W8BAAmine5-Hydroxytryptamine5-HT1AHomo sapiensSEP-363856-Gi1/β1/γ232023-11-22doi.org/10.1038/s41586-023-06775-1
8W8B (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensSEP-363856-32023-11-22doi.org/10.1038/s41586-023-06775-1
8JSPAAmine5-Hydroxytryptamine5-HT1AHomo sapiensUlotaront-Gi1/β1/γ23.652023-11-15doi.org/10.1038/s41586-023-06804-z
8JSP (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensUlotaront-3.652023-11-15doi.org/10.1038/s41586-023-06804-z
8FY8AAmine5-Hydroxytryptamine5-HT1AHomo sapiens5-MeO-DMT-Gi1/β1/γ12.792024-05-15doi.org/10.1038/s41586-024-07403-2
8FY8 (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiens5-MeO-DMT-2.792024-05-15doi.org/10.1038/s41586-024-07403-2
8FYEAAmine5-Hydroxytryptamine5-HT1AHomo sapiens4-F,5-MeO-PyrT-Gi1/β1/γ12.852024-05-15doi.org/10.1038/s41586-024-07403-2
8FYE (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiens4-F,5-MeO-PyrT-2.852024-05-15doi.org/10.1038/s41586-024-07403-2
8FYLAAmine5-Hydroxytryptamine5-HT1AHomo sapiensVilazodone-Gi1/β1/γ12.942024-05-15doi.org/10.1038/s41586-024-07403-2
8FYL (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensVilazodone-2.942024-05-15doi.org/10.1038/s41586-024-07403-2
8FYTAAmine5-Hydroxytryptamine5-HT1AHomo sapiensLSD-Gi1/β1/γ12.642024-05-15doi.org/10.1038/s41586-024-07403-2
8FYT (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensLSD-2.642024-05-15doi.org/10.1038/s41586-024-07403-2
8FYXAAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspirone-Gi1/β1/γ12.722024-05-15doi.org/10.1038/s41586-024-07403-2
8FYX (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspirone-2.722024-05-15doi.org/10.1038/s41586-024-07403-2
8JT6AAmine5-Hydroxytryptamine5-HT1AHomo sapiens(R)-IHCH-7179-Gi1/β1/γ232024-02-28doi.org/10.1016/j.cell.2024.02.034
8JT6 (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiens(R)-IHCH-7179-32024-02-28doi.org/10.1016/j.cell.2024.02.034
8PJKAAmine5-Hydroxytryptamine5-HT1AHomo sapiensST171-Gi1/β1/γ12.42024-05-29doi.org/10.1126/sciadv.adv9267
8PJK (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensST171-2.42024-05-29doi.org/10.1126/sciadv.adv9267
8PKMAAmine5-Hydroxytryptamine5-HT1AHomo sapiensBefiradol-Gi1/β1/γ12.92024-05-29doi.org/10.1126/sciadv.adv9267
8PKM (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBefiradol-2.92024-05-29doi.org/10.1126/sciadv.adv9267
9GL2AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBefiradol-Gs/β1/γ23.22025-07-02doi.org/10.1126/sciadv.adv9267
9GL2 (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBefiradol-3.22025-07-02doi.org/10.1126/sciadv.adv9267
9DYFAAmine5-Hydroxytryptamine5-HT1AHomo sapiensAsenapine-Gi1/β1/γ22.742025-08-13doi.org/10.1126/sciadv.adu9851
9DYF (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensAsenapine-2.742025-08-13doi.org/10.1126/sciadv.adu9851
9DYDAAmine5-Hydroxytryptamine5-HT1AHomo sapiensAsenapine-Go/β1/γ22.962025-08-13doi.org/10.1126/sciadv.adu9851
9DYD (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensAsenapine-2.962025-08-13doi.org/10.1126/sciadv.adu9851
9DYEAAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspirone-Go/β1/γ22.92025-08-13doi.org/10.1126/sciadv.adu9851
9DYE (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspirone-2.92025-08-13doi.org/10.1126/sciadv.adu9851
9MD1AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspirone-Gz/β1/γ23.032025-08-13doi.org/10.1126/sciadv.adu9851
9MD1 (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspirone-3.032025-08-13doi.org/10.1126/sciadv.adu9851




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Download 9GL2_nogp.zip



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