Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:?1 9.862141410
2R:R:E64 6.935407
3R:R:L67 6.495428
4R:R:V70 7.5447
5R:R:N72 7.265429
6R:R:L78 6.59519
7R:R:D82 6.676519
8R:R:L83 2.915438
9R:R:L90 4.262518
10R:R:L99 3.6455
11R:R:W102 6.97286719
12R:R:F112 7.5675416
13R:R:T121 4.84418
14R:R:H126 7.73143718
15R:R:L127 6.4525418
16R:R:D133 5.5175449
17R:R:R134 6.6775419
18R:R:Y135 7.87509
19R:R:W161 7.715619
20R:R:Y195 9.266508
21R:R:F204 10.808518
22R:R:L208 6.1175417
23R:R:Y215 5.836519
24R:R:F219 4.946506
25R:R:I350 4.3425418
26R:R:F354 5.18333619
27R:R:I355 4.365407
28R:R:W358 8.09429718
29R:R:F361 9.52518
30R:R:F362 11.38517
31R:R:I385 3.825406
32R:R:W387 8.618518
33R:R:Y390 9.1618
34R:R:N396 10.2325419
35R:R:Y400 5.63857719
36R:R:Y402 4.844506
37R:R:D406 6.2525427
38R:R:F407 7.835628
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:?1 R:R:Y390 51.49410.08YesYes108
2R:R:W387 R:R:Y390 32.756819.29YesYes188
3R:R:L43 R:R:W387 25.849514.81NoYes078
4R:R:L43 R:R:V98 22.06891.49NoNo076
5R:R:S40 R:R:V98 10.19466.46NoNo056
6R:R:L90 R:R:Y390 15.22264.69YesYes188
7R:R:L90 R:R:S86 10.16693YesNo088
8L:L:?1 R:R:C120 20.07874.96YesNo107
9R:R:C120 R:R:V85 20.84373.42NoNo078
10R:R:S393 R:R:V85 20.57766.46NoNo098
11R:R:D82 R:R:S393 20.69965.89YesNo099
12R:R:D82 R:R:N54 72.11046.73YesNo099
13R:R:L83 R:R:N54 10.90974.12YesNo089
14L:L:?1 R:R:W358 90.09924.45YesYes108
15R:R:N392 R:R:W358 46.260912.43NoYes098
16R:R:N392 R:R:N396 46.870712.26NoYes099
17R:R:D82 R:R:N396 30.8728.08YesYes199
18R:R:N54 R:R:P397 61.56666.52NoNo099
19R:R:P397 R:R:Y402 59.59862.78NoYes096
20R:R:V57 R:R:Y402 41.38815.05NoYes096
21R:R:A401 R:R:V57 30.88315.09NoNo089
22R:R:F411 R:R:Y402 11.27568.25NoYes086
23R:R:A401 R:R:F407 28.74886.93NoYes088
24R:R:F407 R:R:L67 15.5949.74YesYes288
25R:R:E64 R:R:L67 13.53185.3YesYes078
26R:R:F354 R:R:W358 65.90174.01YesYes198
27R:R:F354 R:R:L127 1003.65YesYes198
28R:R:L127 R:R:L78 35.20714.15YesYes189
29R:R:H126 R:R:L78 70.13697.71YesYes189
30R:R:H126 R:R:S77 51.37765.58YesNo189
31R:R:L74 R:R:S77 49.38743NoNo089
32R:R:D133 R:R:L74 42.9685.43YesNo098
33R:R:D133 R:R:V70 15.90444.38YesYes497
34R:R:P150 R:R:V70 11.69133.53NoYes057
35R:R:L78 R:R:N396 21.49239.61YesYes199
36R:R:D133 R:R:R148 22.72310.72YesNo498
37R:R:L127 R:R:Y400 59.82597.03YesYes189
38R:R:H126 R:R:W161 16.94665.29YesYes189
39L:L:?1 R:R:F112 19.29713.81YesYes106
40R:R:F112 R:R:W102 14.934310.02YesYes169
41R:R:L99 R:R:V98 10.19462.98YesNo056
42L:L:?1 R:R:S199 32.40764.7YesNo008
43R:R:S199 R:R:Y195 30.705712.72NoYes088
44R:R:S190 R:R:Y195 20.28386.36NoYes068
45R:R:D180 R:R:S190 18.30482.94NoNo046
46R:R:D180 R:R:R176 16.314715.48NoNo046
47R:R:R176 R:R:R181 12.26799.6NoNo664
48R:R:Q106 R:R:R181 10.27773.5NoNo044
49R:R:L118 R:R:W161 10.57155.69NoYes069
50L:L:?1 R:R:T121 12.00734.61YesYes108
51R:R:I124 R:R:P207 12.82223.39NoNo089
52R:R:R134 R:R:Y400 40.62317.2YesYes199
53R:R:R134 R:R:Y215 39.74728.23YesYes199
54R:R:I350 R:R:Y400 41.99793.63YesYes189
55R:R:I350 R:R:Y215 39.5928.46YesYes189
56R:R:I218 R:R:Y215 39.45343.63NoYes099
57R:R:I218 R:R:Y135 31.15473.63NoYes099
58R:R:R217 R:R:Y135 11.52512.35NoYes079
59R:R:R148 R:R:Y144 20.849312.35NoNo088
60R:R:V145 R:R:Y144 16.29251.26NoNo068
61R:R:N146 R:R:V145 13.99752.96NoNo056
62L:L:?1 R:R:F362 13.021810.47YesYes107
63R:R:F201 R:R:I197 16.48653.77NoNo057
64R:R:F370 R:R:I197 14.16385.02NoNo057
65R:R:F204 R:R:F362 21.098720.36YesYes187
66R:R:F204 R:R:Y205 16.91899.28YesNo187
67R:R:F201 R:R:Y205 14.09729.28NoNo157
68R:R:L347 R:R:Y215 36.70383.52NoYes089
69R:R:F219 R:R:L347 33.93763.65YesNo068
70R:R:F219 R:R:R223 19.940111.76YesNo067
71R:R:E340 R:R:R223 17.096317.45NoNo087
72R:R:E340 R:R:I226 11.50295.47NoNo086
73L:L:?1 R:R:F361 26.104620.95YesYes108
74R:R:F361 R:R:I385 46.90953.77YesYes086
75R:R:I385 R:R:V364 36.24924.61YesNo066
76R:R:L368 R:R:V364 32.67372.98NoNo046
77R:R:L368 R:R:M377 10.98735.65NoNo044
78R:R:C375 R:R:L368 18.26041.59NoNo044
79R:R:F362 R:R:W358 19.82378.02YesYes178
80R:R:D82 R:R:L78 28.65466.79YesYes199
81R:R:F204 R:R:F354 24.65778.57YesYes189
82R:R:F361 R:R:F362 27.939512.86YesYes187
83R:R:L78 R:R:Y400 30.97734.69YesYes199
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:?1 R:R:F112 3.81 1 Yes Yes 0 6 0 1
L:L:?1 R:R:I113 3.35 1 Yes No 0 7 0 1
L:L:?1 R:R:D116 30.77 1 Yes No 0 8 0 1
L:L:?1 R:R:V117 17.47 1 Yes No 0 8 0 1
L:L:?1 R:R:C120 4.96 1 Yes No 0 7 0 1
L:L:?1 R:R:T121 4.61 1 Yes Yes 0 8 0 1
L:L:?1 R:R:I189 8.93 1 Yes No 0 6 0 1
L:L:?1 R:R:S199 4.7 1 Yes No 0 8 0 1
L:L:?1 R:R:A203 4.93 1 Yes No 0 8 0 1
L:L:?1 R:R:W358 4.45 1 Yes Yes 0 8 0 1
L:L:?1 R:R:F361 20.95 1 Yes Yes 0 8 0 1
L:L:?1 R:R:F362 10.47 1 Yes Yes 0 7 0 1
L:L:?1 R:R:N386 8.59 1 Yes No 0 7 0 1
L:L:?1 R:R:Y390 10.08 1 Yes Yes 0 8 0 1
R:R:C120 R:R:V85 3.42 1 No No 7 8 1 2
R:R:F112 R:R:V89 5.24 1 Yes No 6 8 1 2
R:R:D116 R:R:V89 7.3 1 No No 8 8 1 2
R:R:V89 R:R:Y390 5.05 1 No Yes 8 8 2 1
R:R:L90 R:R:W387 3.42 1 Yes Yes 8 8 2 2
R:R:L90 R:R:Y390 4.69 1 Yes Yes 8 8 2 1
R:R:M92 R:R:W102 3.49 1 No Yes 6 9 2 2
R:R:F112 R:R:M92 11.2 1 Yes No 6 6 1 2
R:R:A93 R:R:Y390 4 0 No Yes 7 8 2 1
R:R:F112 R:R:W102 10.02 1 Yes Yes 6 9 1 2
R:R:D116 R:R:Y390 11.49 1 No Yes 8 8 1 1
R:R:C120 R:R:W358 5.22 1 No Yes 7 8 1 1
R:R:G164 R:R:T121 3.64 0 No Yes 8 8 2 1
R:R:I167 R:R:T121 6.08 0 No Yes 8 8 2 1
R:R:A203 R:R:T121 5.03 1 No Yes 8 8 1 1
R:R:F354 R:R:I124 5.02 1 Yes No 9 8 2 2
R:R:I124 R:R:W358 14.09 1 No Yes 8 8 2 1
R:R:S199 R:R:Y195 12.72 0 No Yes 8 8 1 2
R:R:F362 R:R:T200 5.19 1 Yes No 7 7 1 2
R:R:F204 R:R:F354 8.57 1 Yes Yes 8 9 2 2
R:R:F204 R:R:F362 20.36 1 Yes Yes 8 7 2 1
R:R:F354 R:R:W358 4.01 1 Yes Yes 9 8 2 1
R:R:F362 R:R:W358 8.02 1 Yes Yes 7 8 1 1
R:R:G389 R:R:W358 8.44 0 No Yes 8 8 2 1
R:R:N392 R:R:W358 12.43 0 No Yes 9 8 2 1
R:R:F361 R:R:F362 12.86 1 Yes Yes 8 7 1 1
R:R:F361 R:R:I385 3.77 1 Yes Yes 8 6 1 2
R:R:F361 R:R:N386 7.25 1 Yes No 8 7 1 1
R:R:W387 R:R:Y390 19.29 1 Yes Yes 8 8 2 1
R:R:A365 R:R:F361 2.77 0 No Yes 8 8 2 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 8FYT_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3.35
Number of Linked Nodes 269
Number of Links 305
Number of Hubs 38
Number of Links mediated by Hubs 152
Number of Communities 7
Number of Nodes involved in Communities 62
Number of Links involved in Communities 91
Path Summary
Number Of Nodes in MetaPath 84
Number Of Links MetaPath 83
Number of Shortest Paths 50525
Length Of Smallest Path 3
Average Path Length 11.9385
Length of Longest Path 27
Minimum Path Strength 1.41
Average Path Strength 6.6009
Maximum Path Strength 25.86
Minimum Path Correlation 0.7
Average Path Correlation 0.936966
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 5.88235
Average % Of Corr. Nodes 62.7275
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 51.8875
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function• binding   • tetrapyrrole binding   • heme binding   • electron transfer activity   • cation binding   • transition metal ion binding   • iron ion binding   • ion binding   • metal ion binding   • small molecule binding   • serotonin binding   • amine binding   • heterocyclic compound binding   • G protein-coupled amine receptor activity   • G protein-coupled serotonin receptor activity   • molecular transducer activity   • G protein-coupled receptor activity   • transmembrane signaling receptor activity   • signaling receptor activity   • Gi/o-coupled serotonin receptor activity   • neurotransmitter receptor activity   • serotonin receptor activity   • protein binding   • signaling receptor binding   • receptor-receptor interaction   • electron transport chain   • metabolic process   • cellular process   • generation of precursor metabolites and energy   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • cell communication   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway
Gene OntologyBiological Process• electron transport chain   • metabolic process   • cellular process   • generation of precursor metabolites and energy   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • cell communication   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • signal transduction   • behavior   • multicellular organismal process   • exploration behavior   • regulation of amine metabolic process   • dopamine metabolic process   • primary metabolic process   • catechol-containing compound metabolic process   • regulation of primary metabolic process   • amine metabolic process   • catecholamine metabolic process   • phenol-containing compound metabolic process   • regulation of catecholamine metabolic process   • regulation of metabolic process   • biogenic amine metabolic process   • regulation of dopamine metabolic process   • regulation of tube diameter   • system process   • regulation of tube size   • regulation of system process   • circulatory system process   • regulation of blood circulation   • regulation of vasoconstriction   • vascular process in circulatory system   • regulation of multicellular organismal process   • blood vessel diameter maintenance   • regulation of biological quality   • blood circulation   • vasoconstriction   • regulation of anatomical structure size   • cell-cell signaling   • gamma-aminobutyric acid signaling pathway   • regulation of behavior   • ammonium ion metabolic process   • serotonin metabolic process   • indole-containing compound metabolic process   • primary amino compound metabolic process   • cellular response to nitrogen compound   • response to dopamine   • serotonin receptor signaling pathway   • cellular response to dopamine   • response to monoamine   • response to oxygen-containing compound   • response to nitrogen compound   • cellular response to oxygen-containing compound   • cellular response to chemical stimulus   • response to catecholamine   • cellular response to monoamine stimulus   • response to chemical   • cellular response to catecholamine stimulus   • cell population proliferation   • positive regulation of cell population proliferation   • regulation of cell population proliferation   • positive regulation of biological process   • positive regulation of cellular process   • regulation of localization   • regulation of hormone secretion   • transport   • hormone secretion   • localization   • regulation of secretion by cell   • secretion by cell   • signal release   • regulation of signaling   • regulation of transport   • secretion   • regulation of hormone levels   • export from cell   • establishment of localization   • regulation of secretion   • regulation of cell communication   • hormone transport   • monoamine transport   • nitrogen compound transport   • organic hydroxy compound transport   • monoatomic ion transport   • serotonin secretion   • regulation of monoatomic ion transport   • regulation of serotonin secretion   • serotonin transport   • trans-synaptic signaling   • synaptic signaling   • anterograde trans-synaptic signaling   • chemical synaptic transmission   • behavioral defense response   • fear response   • behavioral fear response   • defense response   • response to stress   • multicellular organismal response to stress   • G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger   • cellular anatomical structure   • periplasmic space   • cell periphery   • plasma membrane   • membrane   • somatodendritic compartment   • cell projection   • dendrite   • dendritic tree   • neuron projection   • plasma membrane bounded cell projection   • synapse   • cell junction   • D2 dopamine receptor binding   • protein binding   • binding   • signaling receptor binding   • G protein-coupled receptor binding   • dopamine receptor binding   • phosphorus-oxygen lyase activity   • enzyme regulator activity   • cyclase regulator activity   • molecular function regulator activity   • cyclase activity   • adenylate cyclase regulator activity   • lyase activity   • catalytic activity   • adenylate cyclase activity   • guanyl nucleotide binding   • GTP binding   • nucleotide binding   • guanyl ribonucleotide binding   • purine ribonucleotide binding   • purine ribonucleoside triphosphate binding   • nucleoside phosphate binding   • ion binding   • purine nucleotide binding   • anion binding   • heterocyclic compound binding   • carbohydrate derivative binding   • ribonucleotide binding   • small molecule binding   • cation binding   • magnesium ion binding   • metal ion binding   • GDP binding   • G protein-coupled serotonin receptor binding   • protein-containing complex binding   • G-protein beta/gamma-subunit complex binding   • pyrophosphatase activity   • GTPase activity   • G protein activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • response to hormone   • response to endogenous stimulus   • response to peptide hormone   • cell division   • leukocyte migration   • immune system process   • mononuclear cell migration   • lymphocyte migration   • cell migration   • T cell migration   • cell motility   • regulation of steroid biosynthetic process   • regulation of cholesterol biosynthetic process   • regulation of cholesterol metabolic process   • steroid metabolic process   • regulation of lipid metabolic process   • sterol metabolic process   • cholesterol metabolic process   • lipid biosynthetic process   • alcohol metabolic process   • positive regulation of metabolic process   • regulation of small molecule metabolic process   • positive regulation of biosynthetic process   • positive regulation of lipid metabolic process   • small molecule metabolic process   • steroid biosynthetic process   • regulation of biosynthetic process   • secondary alcohol biosynthetic process   • regulation of alcohol biosynthetic process   • small molecule biosynthetic process   • regulation of steroid metabolic process   • cholesterol biosynthetic process   • positive regulation of cholesterol biosynthetic process   • secondary alcohol metabolic process   • positive regulation of steroid biosynthetic process   • biosynthetic process   • sterol biosynthetic process   • positive regulation of lipid biosynthetic process   • regulation of sterol biosynthetic process   • alcohol biosynthetic process   • positive regulation of cholesterol metabolic process   • positive regulation of steroid metabolic process   • regulation of lipid biosynthetic process   • positive regulation of small molecule metabolic process   • positive regulation of alcohol biosynthetic process   • positive regulation of sterol biosynthetic process   • lipid metabolic process   • regulation of cytoskeleton organization   • regulation of cellular component organization   • microtubule cytoskeleton organization   • regulation of mitotic spindle organization   • mitotic cell cycle   • cellular component organization   • cell cycle   • cellular component organization or biogenesis   • regulation of cell cycle   • microtubule cytoskeleton organization involved in mitosis   • spindle organization   • cell cycle process   • regulation of cell cycle process   • regulation of microtubule-based process   • regulation of spindle organization   • regulation of organelle organization   • mitotic spindle organization   • organelle organization   • mitotic cell cycle process   • microtubule-based process   • cytoskeleton organization   • regulation of microtubule cytoskeleton organization   • protein localization   • positive regulation of protein localization to cell periphery   • protein localization to cell periphery   • cellular localization   • regulation of protein localization   • positive regulation of protein localization to cell cortex   • regulation of protein localization to cell periphery   • regulation of cellular localization   • regulation of protein localization to cell cortex   • cellular macromolecule localization   • macromolecule localization   • positive regulation of protein localization   • protein localization to cell cortex   • response to ketone   • response to prostaglandin   • response to lipid   • response to alcohol   • response to prostaglandin E   • cellular response to forskolin   • cellular response to alcohol   • response to forskolin   • cellular response to lipid   • cellular response to ketone   • midbody   • membrane-bounded organelle   • intracellular anatomical structure   • nucleus   • membrane-enclosed lumen   • intracellular membraneless organelle   • intracellular membrane-bounded organelle   • nucleolus   • intracellular organelle lumen   • intracellular organelle   • organelle lumen   • organelle   • membraneless organelle   • nuclear lumen   • cell cortex   • cytoplasm   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cytoplasmic side of plasma membrane   • GTPase complex   • extrinsic component of membrane   • extrinsic component of cytoplasmic side of plasma membrane   • extracellular exosome   • extracellular vesicle   • extracellular organelle   • extracellular region   • extracellular space   • vesicle   • extracellular membrane-bounded organelle   • centrosome   • microtubule organizing center   • cytoskeleton   • microtubule cytoskeleton   • centriolar satellite   • cytosol   • nucleoplasm   • vacuolar membrane   • lytic vacuole   • vacuole   • lytic vacuole membrane   • bounding membrane of organelle   • lysosomal membrane   • organelle membrane   • lysosome   • Golgi apparatus   • endomembrane system   • cilium   • ciliary basal body   • enzyme binding   • GTPase binding   • signaling receptor complex adaptor activity   • protein-macromolecule adaptor activity   • molecular adaptor activity   • signaling adaptor activity   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of taste   • developmental process   • sensory organ development   • eye development   • animal organ development   • retina development in camera-type eye   • visual system development   • multicellular organism development   • camera-type eye development   • anatomical structure development   • sensory system development   • system development   • cellular response to prostaglandin stimulus   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to hormone stimulus   • small GTPase-mediated signal transduction   • Ras protein signal transduction   • intracellular signal transduction   • intracellular signaling cassette   • phospholipase C-activating G protein-coupled receptor signaling pathway   • adenylate cyclase-activating dopamine receptor signaling pathway   • G protein-coupled dopamine receptor signaling pathway   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cellular response to acetylcholine   • acetylcholine receptor signaling pathway   • postsynaptic signal transduction   • G protein-coupled acetylcholine receptor signaling pathway   • response to acetylcholine   • non-motile cilium   • 9+0 non-motile cilium   • photoreceptor disc membrane   • photoreceptor outer segment   • photoreceptor cell cilium   • G-protein beta-subunit binding   • fibroblast proliferation
Gene OntologyCellular Component
SCOP2Domain Identifier• Ras-like P-loop GTPases   • Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• Ras-like P-loop GTPases   • Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
Code7LD
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
Code7LD
NameLysergic acid diethylamide
SynonymsN,N-diethyllysergamide
Identifier
FormulaC20 H25 N3 O
Molecular Weight323.432
SMILES
PubChem5761
Formal Charge0
Total Atoms49
Total Chiral Atoms2
Total Bonds52
Total Aromatic Bonds10

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP08908
Sequence
>8FYT_nogp_Chain_R
YQVITSLLL GTLIFCAVL GNACVVAAI ALERSLQNV ANYLIGSLA 
VTDLMVSVL VLPMAALYQ VLNKWTLGQ VTCDLFIAL DVLCCTSSI 
WHLCAIALD RYWAITDPI DYVNKRTPR RAAALISLT WLIGFLISI 
PPMLGWRTP EDRSDPDAC TISKDHGYT IYSTFGAFY IPLLLMLVL 
YGRIFRAAR FRIRKKNER NAEAKRKMA LARERKTVK TLGIIMGTF 
ILCWLPFFI VALVLPFCE SSCHMPTLL GAIINWLGY SNSLLNPVI 
YAYFNKDFQ NAFKKII


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
8PKMAAmine5-Hydroxytryptamine5-HT1AHomo sapiensBefiradolt7mGi1/β1/γ12.92024-05-29To be published
8PKM (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBefiradolt7m2.92024-05-29To be published
8PJKAAmine5-Hydroxytryptamine5-HT1AHomo sapiensST171t7mGi1/β1/γ12.42024-05-29To be published
8PJK (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensST171t7m2.42024-05-29To be published
8FYXAAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspirone-Gi1/β1/γ12.722024-05-1510.1038/s41586-024-07403-2
8FYX (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspirone-2.722024-05-1510.1038/s41586-024-07403-2
8FYTAAmine5-Hydroxytryptamine5-HT1AHomo sapiensLSD-Gi1/β1/γ12.642024-05-1510.1038/s41586-024-07403-2
8FYT (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensLSD-2.642024-05-1510.1038/s41586-024-07403-2
8FYLAAmine5-Hydroxytryptamine5-HT1AHomo sapiensVilazodone-Gi1/β1/γ12.942024-05-1510.1038/s41586-024-07403-2
8FYL (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensVilazodone-2.942024-05-1510.1038/s41586-024-07403-2
8FYEAAmine5-Hydroxytryptamine5-HT1AHomo sapiens4-F,5-MeO-PyrT-Gi1/β1/γ12.852024-05-1510.1038/s41586-024-07403-2
8FYE (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiens4-F,5-MeO-PyrT-2.852024-05-1510.1038/s41586-024-07403-2
8FY8AAmine5-Hydroxytryptamine5-HT1AHomo sapiens5-MeO-DMT-Gi1/β1/γ12.792024-05-1510.1038/s41586-024-07403-2
8FY8 (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiens5-MeO-DMT-2.792024-05-1510.1038/s41586-024-07403-2
8JT6AAmine5-Hydroxytryptamine5-HT1AHomo sapiens(R)-IHCH-7179-Gi1/β1/γ232024-02-28To be published
8JT6 (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiens(R)-IHCH-7179-32024-02-28To be published
8W8BAAmine5-Hydroxytryptamine5-HT1AHomo sapiensSEP-363856-Gi1/β1/γ232023-11-2210.1038/s41586-023-06775-1
8W8B (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensSEP-363856-32023-11-2210.1038/s41586-023-06775-1
8JSPAAmine5-Hydroxytryptamine5-HT1AHomo sapiensUlotaront-Gi1/β1/γ23.652023-11-1510.1038/s41586-023-06804-z
8JSP (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensUlotaront-3.652023-11-1510.1038/s41586-023-06804-z
7E2ZAAmine5-Hydroxytryptamine5-HT1AHomo sapiensAripiprazole-Gi1/β1/γ23.12021-04-1410.1038/s41586-021-03376-8
7E2Z (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensAripiprazole-3.12021-04-1410.1038/s41586-021-03376-8
7E2YAAmine5-Hydroxytryptamine5-HT1AHomo sapiensSerotonin-Gi1/β1/γ232021-04-1410.1038/s41586-021-03376-8
7E2Y (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensSerotonin-32021-04-1410.1038/s41586-021-03376-8
7E2XAAmine5-Hydroxytryptamine5-HT1AHomo sapiens--Gi1/β1/γ232021-04-1410.1038/s41586-021-03376-8
7E2X (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiens--32021-04-1410.1038/s41586-021-03376-8




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