Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:?1 9.355451110
2R:R:E64 6.19427
3R:R:L67 5.13167628
4R:R:N72 8.21429
5R:R:L78 6.235619
6R:R:D82 6.652519
7R:R:V89 3.27418
8R:R:L90 3.882518
9R:R:W102 8.64833639
10R:R:T121 4.65418
11R:R:S122 8.0775418
12R:R:H126 7.17571718
13R:R:L127 6.16418
14R:R:Y135 7.672509
15R:R:W161 8.318519
16R:R:I167 3.8575408
17R:R:R176 8.3075406
18R:R:C187 5.9425439
19R:R:Y195 8.71508
20R:R:F204 9.96518
21R:R:Y205 5.5775417
22R:R:Y215 5.885609
23R:R:E340 10.1325448
24R:R:F354 5.03667619
25R:R:W358 8.23857718
26R:R:L359 5.1975407
27R:R:F361 8.918518
28R:R:F362 10.01617
29R:R:M377 4.844564
30R:R:W387 9.16518
31R:R:Y390 8.34333618
32R:R:N396 9.5525419
33R:R:I399 3.4675408
34R:R:Y400 4.98619
35R:R:Y402 4.544506
36R:R:D406 7.1875427
37R:R:F407 7.17429728
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:?1 R:R:Y390 83.706411.96YesYes108
2R:R:W387 R:R:Y390 73.64616.4YesYes188
3R:R:L43 R:R:W387 65.273817.08NoYes078
4R:R:L43 R:R:T39 60.91212.95NoNo075
5R:R:T39 R:R:V98 54.10593.17NoNo056
6R:R:L90 R:R:Y390 22.97765.86YesYes188
7R:R:L90 R:R:S86 15.48394.5YesNo088
8R:R:A50 R:R:S86 12.94023.42NoNo088
9R:R:A50 R:R:L394 10.38123.15NoNo087
10R:R:C119 R:R:V89 33.32823.42NoYes078
11R:R:C119 R:R:M84 24.95613.24NoNo077
12R:R:L88 R:R:M84 10.25135.65NoNo067
13R:R:V89 R:R:Y390 29.84493.79YesYes188
14L:L:?1 R:R:C120 31.57134.63YesNo107
15R:R:C120 R:R:V85 34.54283.42NoNo078
16R:R:C119 R:R:V85 20.78533.42NoNo078
17R:R:S393 R:R:V85 40.29494.85NoNo098
18R:R:D82 R:R:S393 40.3564.42YesNo099
19R:R:D82 R:R:N54 1006.73YesNo099
20R:R:L83 R:R:N54 13.3684.12NoNo089
21L:L:?1 R:R:W358 97.56324.15YesYes108
22R:R:N392 R:R:W358 49.02613.56NoYes098
23R:R:N392 R:R:N396 47.28449.54NoYes099
24R:R:D82 R:R:N396 44.51158.08YesYes199
25R:R:N54 R:R:P397 85.79186.52NoNo099
26R:R:P397 R:R:Y402 82.13282.78NoYes096
27R:R:F411 R:R:Y402 20.65549.28NoYes086
28R:R:C56 R:R:F411 12.4362.79NoNo088
29R:R:V57 R:R:Y402 84.21055.05NoYes096
30R:R:A79 R:R:V57 16.55343.39NoNo099
31R:R:A401 R:R:V57 64.76975.09NoNo089
32R:R:A401 R:R:F407 60.83572.77NoYes088
33R:R:F407 R:R:L67 28.59988.53YesYes288
34R:R:E64 R:R:L67 16.55345.3YesYes278
35R:R:F407 R:R:N72 12.25279.67YesYes289
36R:R:F354 R:R:W358 66.22874.01YesYes198
37R:R:F354 R:R:L127 65.7783.65YesYes198
38R:R:L127 R:R:L78 31.22764.15YesYes189
39R:R:H126 R:R:L78 63.44057.71YesYes189
40R:R:H126 R:R:S77 47.65875.58YesNo189
41R:R:L74 R:R:S77 44.69483NoNo089
42R:R:D133 R:R:L74 35.36785.43NoNo098
43R:R:D133 R:R:R148 32.228211.91NoNo098
44R:R:R148 R:R:V70 22.717914.38NoNo087
45R:R:P150 R:R:V70 16.30133.53NoNo057
46R:R:L78 R:R:N396 13.03199.61YesYes199
47R:R:I130 R:R:L78 14.46034.28NoYes199
48R:R:L127 R:R:Y400 25.07835.86YesYes189
49R:R:M84 R:R:W161 19.76934.65NoYes079
50R:R:L99 R:R:V98 49.4922.98NoNo056
51R:R:L95 R:R:L99 32.45745.54NoNo065
52R:R:L104 R:R:L95 30.04354.15NoNo076
53R:R:L104 R:R:W102 25.215821.64NoYes079
54R:R:L99 R:R:T103 15.07914.42NoNo055
55R:R:K101 R:R:T103 12.55064.5NoNo055
56R:R:D185 R:R:K101 10.09859.68NoNo045
57L:L:?1 R:R:S199 50.28658.75YesNo008
58R:R:S199 R:R:Y195 47.971913.99NoYes088
59R:R:S190 R:R:Y195 20.32693.82NoYes068
60R:R:R176 R:R:S190 17.8295.27YesNo066
61L:L:?1 R:R:V117 16.003411.94YesNo008
62R:R:I167 R:R:V117 11.35893.07YesNo088
63L:L:?1 R:R:T121 16.01865.37YesYes108
64R:R:I167 R:R:T121 11.34374.56YesYes088
65R:R:I124 R:R:W358 13.131215.27NoYes188
66R:R:I124 R:R:P207 25.07073.39NoNo089
67R:R:P207 R:R:W125 20.609616.21NoNo097
68R:R:R134 R:R:Y400 25.82697.2NoYes199
69R:R:F354 R:R:M211 57.57397.46YesNo099
70R:R:M211 R:R:Y215 55.0765.99NoYes099
71R:R:R134 R:R:Y215 37.39977.2NoYes099
72R:R:I218 R:R:Y215 57.81073.63NoYes099
73R:R:I218 R:R:Y135 55.164.84NoYes099
74R:R:W136 R:R:Y135 29.69223.86NoYes059
75R:R:R152 R:R:W136 24.92557NoNo075
76R:R:D143 R:R:R152 21.961710.72NoNo067
77R:R:I163 R:R:W125 11.664515.27NoNo057
78R:R:I167 R:R:Y198 15.45346.04YesNo085
79R:R:D192 R:R:Y195 15.39232.3NoYes068
80R:R:D192 R:R:T177 10.32011.45NoNo065
81L:L:?1 R:R:F362 19.417911.54YesYes107
82R:R:F362 R:R:Y205 11.67983.09YesYes177
83R:R:F201 R:R:Y205 23.33667.22NoYes057
84R:R:F201 R:R:I197 20.47215.02NoNo057
85R:R:F370 R:R:I197 17.59225.02NoNo057
86R:R:F204 R:R:F362 20.487419.29YesYes187
87R:R:F204 R:R:L359 27.11026.09YesYes087
88R:R:L347 R:R:Y215 52.39484.69NoYes089
89R:R:I350 R:R:Y400 29.57763.63NoYes089
90R:R:I350 R:R:Y215 28.61518.46NoYes089
91R:R:F219 R:R:L347 43.98443.65NoNo068
92R:R:F219 R:R:R223 38.30119.62NoNo067
93R:R:E340 R:R:R223 32.465119.77YesNo487
94R:R:E340 R:R:I226 15.04855.47YesNo086
95R:R:E340 R:R:L337 15.07911.33YesNo085
96R:R:I399 R:R:Y400 43.31223.63YesYes089
97R:R:I363 R:R:L359 16.44647.14NoYes077
98L:L:?1 R:R:F361 23.978316.87YesYes108
99R:R:F361 R:R:I385 31.16643.77YesNo086
100R:R:G382 R:R:I385 26.75881.76NoNo046
101R:R:G382 R:R:M377 22.3361.75NoYes044
102R:R:I363 R:R:V367 13.74231.54NoNo076
103R:R:C371 R:R:V367 11.02281.71NoNo056
104R:R:F403 R:R:I399 32.96161.26NoYes088
105R:R:F403 R:R:V398 30.92962.62NoNo086
106R:R:H126 R:R:W161 17.10344.23YesYes189
107R:R:F362 R:R:W358 20.79297.02YesYes178
108R:R:D82 R:R:L78 26.92698.14YesYes199
109R:R:F204 R:R:F354 41.00536.43YesYes189
110R:R:V398 R:R:Y402 29.08871.26NoYes066
111R:R:F361 R:R:F362 20.311713.93YesYes187
112R:R:L127 R:R:N396 11.435310.98YesYes189
113R:R:L78 R:R:Y400 27.04153.52YesYes199
114R:R:F354 R:R:I124 14.62075.02YesNo198
115R:R:I130 R:R:R134 12.22985.01NoNo199
116R:R:F204 R:R:Y205 15.88888.25YesYes187
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:?1 R:R:D116 13.85 1 Yes No 0 8 0 1
L:L:?1 R:R:V117 11.94 1 Yes No 0 8 0 1
L:L:?1 R:R:C120 4.63 1 Yes No 0 7 0 1
L:L:?1 R:R:T121 5.37 1 Yes Yes 0 8 0 1
L:L:?1 R:R:I189 10.4 1 Yes No 0 6 0 1
L:L:?1 R:R:S199 8.75 1 Yes No 0 8 0 1
L:L:?1 R:R:A203 3.45 1 Yes No 0 8 0 1
L:L:?1 R:R:W358 4.15 1 Yes Yes 0 8 0 1
L:L:?1 R:R:F361 16.87 1 Yes Yes 0 8 0 1
L:L:?1 R:R:F362 11.54 1 Yes Yes 0 7 0 1
L:L:?1 R:R:Y390 11.96 1 Yes Yes 0 8 0 1
R:R:C120 R:R:V85 3.42 1 No No 7 8 1 2
R:R:D116 R:R:V89 4.38 1 No Yes 8 8 1 2
R:R:V89 R:R:Y390 3.79 1 Yes Yes 8 8 2 1
R:R:L90 R:R:W387 4.56 1 Yes Yes 8 8 2 2
R:R:L90 R:R:Y390 5.86 1 Yes Yes 8 8 2 1
R:R:A93 R:R:Y390 4 0 No Yes 7 8 2 1
R:R:D116 R:R:Y390 8.05 1 No Yes 8 8 1 1
R:R:I167 R:R:V117 3.07 0 Yes No 8 8 2 1
R:R:S168 R:R:V117 4.85 0 No No 8 8 2 1
R:R:C120 R:R:W358 5.22 1 No Yes 7 8 1 1
R:R:G164 R:R:T121 3.64 0 No Yes 8 8 2 1
R:R:I167 R:R:T121 4.56 0 Yes Yes 8 8 2 1
R:R:A203 R:R:T121 5.03 1 No Yes 8 8 1 1
R:R:F354 R:R:I124 5.02 1 Yes No 9 8 2 2
R:R:I124 R:R:W358 15.27 1 No Yes 8 8 2 1
R:R:S199 R:R:Y195 13.99 0 No Yes 8 8 1 2
R:R:T200 R:R:Y205 3.75 1 No Yes 7 7 2 2
R:R:F362 R:R:T200 5.19 1 Yes No 7 7 1 2
R:R:F204 R:R:Y205 8.25 1 Yes Yes 8 7 2 2
R:R:F204 R:R:F354 6.43 1 Yes Yes 8 9 2 2
R:R:F204 R:R:F362 19.29 1 Yes Yes 8 7 2 1
R:R:F362 R:R:Y205 3.09 1 Yes Yes 7 7 1 2
R:R:F354 R:R:W358 4.01 1 Yes Yes 9 8 2 1
R:R:F362 R:R:W358 7.02 1 Yes Yes 7 8 1 1
R:R:G389 R:R:W358 8.44 0 No Yes 8 8 2 1
R:R:N392 R:R:W358 13.56 0 No Yes 9 8 2 1
R:R:F361 R:R:F362 13.93 1 Yes Yes 8 7 1 1
R:R:F361 R:R:I385 3.77 1 Yes No 8 6 1 2
R:R:F361 R:R:N386 7.25 1 Yes No 8 7 1 2
R:R:W387 R:R:Y390 16.4 1 Yes Yes 8 8 2 1
R:R:A365 R:R:F361 2.77 0 No Yes 8 8 2 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 8FY8_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3.04
Number of Linked Nodes 263
Number of Links 307
Number of Hubs 37
Number of Links mediated by Hubs 151
Number of Communities 6
Number of Nodes involved in Communities 53
Number of Links involved in Communities 80
Path Summary
Number Of Nodes in MetaPath 117
Number Of Links MetaPath 116
Number of Shortest Paths 53248
Length Of Smallest Path 3
Average Path Length 11.9752
Length of Longest Path 26
Minimum Path Strength 1.27
Average Path Strength 6.41461
Maximum Path Strength 16.74
Minimum Path Correlation 0.7
Average Path Correlation 0.936267
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 6.66667
Average % Of Corr. Nodes 62.598
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 43.2484
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function• cation binding   • binding   • ion binding   • serotonin binding   • amine binding   • heterocyclic compound binding   • small molecule binding   • G protein-coupled amine receptor activity   • G protein-coupled serotonin receptor activity   • molecular transducer activity   • G protein-coupled receptor activity   • transmembrane signaling receptor activity   • signaling receptor activity   • Gi/o-coupled serotonin receptor activity   • neurotransmitter receptor activity   • serotonin receptor activity   • protein binding   • signaling receptor binding   • receptor-receptor interaction   • tetrapyrrole binding   • heme binding   • electron transfer activity   • transition metal ion binding   • iron ion binding   • metal ion binding   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • cell communication   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction
Gene OntologyBiological Process• cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • cell communication   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction   • behavior   • multicellular organismal process   • exploration behavior   • regulation of amine metabolic process   • dopamine metabolic process   • primary metabolic process   • catechol-containing compound metabolic process   • regulation of primary metabolic process   • amine metabolic process   • catecholamine metabolic process   • phenol-containing compound metabolic process   • metabolic process   • regulation of catecholamine metabolic process   • regulation of metabolic process   • biogenic amine metabolic process   • regulation of dopamine metabolic process   • regulation of tube diameter   • system process   • regulation of tube size   • regulation of system process   • circulatory system process   • regulation of blood circulation   • regulation of vasoconstriction   • vascular process in circulatory system   • regulation of multicellular organismal process   • blood vessel diameter maintenance   • regulation of biological quality   • blood circulation   • vasoconstriction   • regulation of anatomical structure size   • cell-cell signaling   • gamma-aminobutyric acid signaling pathway   • regulation of behavior   • serotonin metabolic process   • indole-containing compound metabolic process   • cellular response to nitrogen compound   • response to dopamine   • serotonin receptor signaling pathway   • cellular response to dopamine   • response to monoamine   • response to oxygen-containing compound   • response to nitrogen compound   • cellular response to oxygen-containing compound   • cellular response to chemical stimulus   • response to catecholamine   • cellular response to monoamine stimulus   • response to chemical   • cellular response to catecholamine stimulus   • cell population proliferation   • positive regulation of cell population proliferation   • regulation of cell population proliferation   • positive regulation of biological process   • positive regulation of cellular process   • regulation of localization   • regulation of hormone secretion   • transport   • hormone secretion   • localization   • regulation of secretion by cell   • secretion by cell   • signal release   • regulation of signaling   • regulation of transport   • secretion   • regulation of hormone levels   • export from cell   • establishment of localization   • regulation of secretion   • regulation of cell communication   • hormone transport   • monoamine transport   • nitrogen compound transport   • organic hydroxy compound transport   • monoatomic ion transport   • serotonin secretion   • regulation of monoatomic ion transport   • regulation of serotonin secretion   • serotonin transport   • trans-synaptic signaling   • synaptic signaling   • anterograde trans-synaptic signaling   • chemical synaptic transmission   • behavioral defense response   • fear response   • behavioral fear response   • defense response   • response to stress   • multicellular organismal response to stress   • G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger   • electron transport chain   • generation of precursor metabolites and energy   • cell periphery   • cellular anatomical structure   • plasma membrane   • membrane   • somatodendritic compartment   • cell projection   • dendrite   • dendritic tree   • neuron projection   • plasma membrane bounded cell projection   • synapse   • cell junction   • periplasmic space   • protein binding   • binding   • G-protein beta-subunit binding   • fibroblast proliferation   • adenylate cyclase-activating dopamine receptor signaling pathway   • G protein-coupled dopamine receptor signaling pathway   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • response to ketone   • response to prostaglandin   • response to lipid   • response to endogenous stimulus   • response to alcohol   • cellular response to prostaglandin stimulus   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to alcohol   • response to hormone   • cellular response to lipid   • response to prostaglandin E   • cellular response to ketone   • cellular response to hormone stimulus   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cytoplasmic side of plasma membrane   • GTPase complex   • extrinsic component of membrane   • extrinsic component of cytoplasmic side of plasma membrane   • extracellular exosome   • membrane-bounded organelle   • extracellular vesicle   • extracellular organelle   • extracellular region   • organelle   • extracellular space   • vesicle   • extracellular membrane-bounded organelle   • enzyme binding   • GTPase binding   • protein-containing complex binding   • pyrophosphatase activity   • GTPase activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • signaling receptor complex adaptor activity   • protein-macromolecule adaptor activity   • molecular adaptor activity   • signaling adaptor activity   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of taste   • developmental process   • sensory organ development   • eye development   • animal organ development   • retina development in camera-type eye   • visual system development   • multicellular organism development   • camera-type eye development   • anatomical structure development   • sensory system development   • system development   • small GTPase-mediated signal transduction   • Ras protein signal transduction   • intracellular signal transduction   • intracellular signaling cassette   • phospholipase C-activating G protein-coupled receptor signaling pathway   • cellular response to acetylcholine   • acetylcholine receptor signaling pathway   • postsynaptic signal transduction   • G protein-coupled acetylcholine receptor signaling pathway   • response to acetylcholine   • non-motile cilium   • 9+0 non-motile cilium   • cilium   • photoreceptor disc membrane   • photoreceptor outer segment   • photoreceptor cell cilium   • organelle membrane   • intracellular anatomical structure   • cytoplasm   • cytosol   • vacuolar membrane   • lytic vacuole   • vacuole   • intracellular membrane-bounded organelle   • intracellular organelle   • lytic vacuole membrane   • bounding membrane of organelle   • lysosomal membrane   • lysosome   • D2 dopamine receptor binding   • signaling receptor binding   • G protein-coupled receptor binding   • dopamine receptor binding   • enzyme regulator activity   • adenylate cyclase inhibitor activity   • cyclase regulator activity   • molecular function inhibitor activity   • cyclase inhibitor activity   • molecular function regulator activity   • enzyme inhibitor activity   • adenylate cyclase regulator activity   • guanyl nucleotide binding   • GTP binding   • nucleotide binding   • guanyl ribonucleotide binding   • purine ribonucleotide binding   • purine ribonucleoside triphosphate binding   • nucleoside phosphate binding   • ion binding   • purine nucleotide binding   • anion binding   • heterocyclic compound binding   • carbohydrate derivative binding   • ribonucleotide binding   • small molecule binding   • cation binding   • magnesium ion binding   • metal ion binding   • GDP binding   • G protein-coupled serotonin receptor binding   • G-protein beta/gamma-subunit complex binding   • G protein activity   • response to peptide hormone   • cell division   • leukocyte migration   • immune system process   • mononuclear cell migration   • lymphocyte migration   • cell migration   • T cell migration   • cell motility   • regulation of steroid biosynthetic process   • regulation of cholesterol biosynthetic process   • regulation of cholesterol metabolic process   • steroid metabolic process   • regulation of lipid metabolic process   • sterol metabolic process   • cholesterol metabolic process   • lipid biosynthetic process   • alcohol metabolic process   • positive regulation of metabolic process   • regulation of small molecule metabolic process   • positive regulation of biosynthetic process   • positive regulation of lipid metabolic process   • small molecule metabolic process   • steroid biosynthetic process   • regulation of biosynthetic process   • secondary alcohol biosynthetic process   • regulation of alcohol biosynthetic process   • small molecule biosynthetic process   • regulation of steroid metabolic process   • cholesterol biosynthetic process   • positive regulation of cholesterol biosynthetic process   • secondary alcohol metabolic process   • positive regulation of steroid biosynthetic process   • biosynthetic process   • sterol biosynthetic process   • positive regulation of lipid biosynthetic process   • regulation of sterol biosynthetic process   • alcohol biosynthetic process   • positive regulation of cholesterol metabolic process   • positive regulation of steroid metabolic process   • regulation of lipid biosynthetic process   • positive regulation of small molecule metabolic process   • positive regulation of alcohol biosynthetic process   • positive regulation of sterol biosynthetic process   • lipid metabolic process   • negative regulation of protein transport   • establishment of protein localization   • negative regulation of biological process   • negative regulation of transport   • negative regulation of secretion   • negative regulation of hormone secretion   • negative regulation of secretion by cell   • intracellular protein localization   • regulation of peptide hormone secretion   • negative regulation of peptide hormone secretion   • establishment of protein localization to extracellular region   • negative regulation of establishment of protein localization   • protein secretion   • regulation of protein secretion   • negative regulation of protein secretion   • regulation of protein localization   • regulation of peptide secretion   • negative regulation of signaling   • negative regulation of cell communication   • protein localization to extracellular region   • negative regulation of peptide secretion   • peptide secretion   • amide transport   • negative regulation of cellular process   • negative regulation of protein localization   • regulation of peptide transport   • regulation of establishment of protein localization   • regulation of protein transport   • peptide transport   • negative regulation of insulin secretion   • protein transport   • regulation of insulin secretion   • peptide hormone secretion   • macromolecule localization   • insulin secretion   • regulation of cytoskeleton organization   • regulation of cellular component organization   • microtubule cytoskeleton organization   • regulation of mitotic spindle organization   • mitotic cell cycle   • cellular component organization   • cell cycle   • cellular component organization or biogenesis   • regulation of cell cycle   • microtubule cytoskeleton organization involved in mitosis   • spindle organization   • cell cycle process   • regulation of cell cycle process   • regulation of microtubule-based process   • regulation of spindle organization   • regulation of organelle organization   • mitotic spindle organization   • organelle organization   • mitotic cell cycle process   • microtubule-based process   • cytoskeleton organization   • regulation of microtubule cytoskeleton organization   • positive regulation of protein localization to cell periphery   • protein localization to cell periphery   • positive regulation of protein localization to cell cortex   • regulation of protein localization to cell periphery   • regulation of protein localization to cell cortex   • positive regulation of protein localization   • protein localization to cell cortex   • cellular response to forskolin   • response to forskolin   • midbody   • nucleus   • membrane-enclosed lumen   • intracellular membraneless organelle   • nucleolus   • intracellular organelle lumen   • organelle lumen   • membraneless organelle   • nuclear lumen   • cell cortex   • centrosome   • microtubule organizing center   • cytoskeleton   • microtubule cytoskeleton   • centriolar satellite   • nucleoplasm   • Golgi apparatus   • endomembrane system   • ciliary basal body
Gene OntologyCellular Component
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain   • Ras-like P-loop GTPases
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain   • Ras-like P-loop GTPases
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeYFW
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodeYFW
Name5-methoxy-N,N-dimethyltryptamine
Synonyms5-MeO-DMT
Identifier
FormulaC13 H18 N2 O
Molecular Weight218.295
SMILES
PubChem1832
Formal Charge0
Total Atoms34
Total Chiral Atoms0
Total Bonds35
Total Aromatic Bonds10

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP08908
Sequence
>8FY8_nogp_Chain_R
YQVITSLLL GTLIFCAVL GNACVVAAI ALERSLQNV ANYLIGSLA 
VTDLMVSVL VLPMAALYQ VLNKWTLGQ VTCDLFIAL DVLCCTSSI 
WHLCAIALD RYWAITDPI DYVNKRTPR RAAALISLT WLIGFLISI 
PPMLGWRTP EDRSDPDAC TISKDHGYT IYSTFGAFY IPLLLMLVL 
YGRIFRAAR FRIRKKNER NAEAKRKMA LARERKTVK TLGIIMGTF 
ILCWLPFFI VALVLPFCE SSCHMPTLL GAIINWLGY SNSLLNPVI 
YAYFNKDFQ NAFKKII


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
7E2XAAmine5-Hydroxytryptamine5-HT1AHomo sapiens--Gi1/β1/γ232021-04-14doi.org/10.1038/s41586-021-03376-8
7E2X (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiens--32021-04-14doi.org/10.1038/s41586-021-03376-8
7E2YAAmine5-Hydroxytryptamine5-HT1AHomo sapiensSerotonin-Gi1/β1/γ232021-04-14doi.org/10.1038/s41586-021-03376-8
7E2Y (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensSerotonin-32021-04-14doi.org/10.1038/s41586-021-03376-8
7E2ZAAmine5-Hydroxytryptamine5-HT1AHomo sapiensAripiprazole-Gi1/β1/γ23.12021-04-14doi.org/10.1038/s41586-021-03376-8
7E2Z (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensAripiprazole-3.12021-04-14doi.org/10.1038/s41586-021-03376-8
8W8BAAmine5-Hydroxytryptamine5-HT1AHomo sapiensSEP-363856-Gi1/β1/γ232023-11-22doi.org/10.1038/s41586-023-06775-1
8W8B (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensSEP-363856-32023-11-22doi.org/10.1038/s41586-023-06775-1
8JSPAAmine5-Hydroxytryptamine5-HT1AHomo sapiensUlotaront-Gi1/β1/γ23.652023-11-15doi.org/10.1038/s41586-023-06804-z
8JSP (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensUlotaront-3.652023-11-15doi.org/10.1038/s41586-023-06804-z
8FY8AAmine5-Hydroxytryptamine5-HT1AHomo sapiens5-MeO-DMT-Gi1/β1/γ12.792024-05-15doi.org/10.1038/s41586-024-07403-2
8FY8 (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiens5-MeO-DMT-2.792024-05-15doi.org/10.1038/s41586-024-07403-2
8FYEAAmine5-Hydroxytryptamine5-HT1AHomo sapiens4-F,5-MeO-PyrT-Gi1/β1/γ12.852024-05-15doi.org/10.1038/s41586-024-07403-2
8FYE (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiens4-F,5-MeO-PyrT-2.852024-05-15doi.org/10.1038/s41586-024-07403-2
8FYLAAmine5-Hydroxytryptamine5-HT1AHomo sapiensVilazodone-Gi1/β1/γ12.942024-05-15doi.org/10.1038/s41586-024-07403-2
8FYL (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensVilazodone-2.942024-05-15doi.org/10.1038/s41586-024-07403-2
8FYTAAmine5-Hydroxytryptamine5-HT1AHomo sapiensLSD-Gi1/β1/γ12.642024-05-15doi.org/10.1038/s41586-024-07403-2
8FYT (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensLSD-2.642024-05-15doi.org/10.1038/s41586-024-07403-2
8FYXAAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspirone-Gi1/β1/γ12.722024-05-15doi.org/10.1038/s41586-024-07403-2
8FYX (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspirone-2.722024-05-15doi.org/10.1038/s41586-024-07403-2
8JT6AAmine5-Hydroxytryptamine5-HT1AHomo sapiens(R)-IHCH-7179-Gi1/β1/γ232024-02-28doi.org/10.1016/j.cell.2024.02.034
8JT6 (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiens(R)-IHCH-7179-32024-02-28doi.org/10.1016/j.cell.2024.02.034
8PJKAAmine5-Hydroxytryptamine5-HT1AHomo sapiensST171-Gi1/β1/γ12.42024-05-29doi.org/10.1126/sciadv.adv9267
8PJK (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensST171-2.42024-05-29doi.org/10.1126/sciadv.adv9267
8PKMAAmine5-Hydroxytryptamine5-HT1AHomo sapiensBefiradol-Gi1/β1/γ12.92024-05-29doi.org/10.1126/sciadv.adv9267
8PKM (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBefiradol-2.92024-05-29doi.org/10.1126/sciadv.adv9267
9GL2AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBefiradol-Gs/β1/γ23.22025-07-02doi.org/10.1126/sciadv.adv9267
9GL2 (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBefiradol-3.22025-07-02doi.org/10.1126/sciadv.adv9267
9DYFAAmine5-Hydroxytryptamine5-HT1AHomo sapiensAsenapine-Gi1/β1/γ22.742025-08-13doi.org/10.1126/sciadv.adu9851
9DYF (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensAsenapine-2.742025-08-13doi.org/10.1126/sciadv.adu9851
9DYDAAmine5-Hydroxytryptamine5-HT1AHomo sapiensAsenapine-Go/β1/γ22.962025-08-13doi.org/10.1126/sciadv.adu9851
9DYD (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensAsenapine-2.962025-08-13doi.org/10.1126/sciadv.adu9851
9DYEAAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspirone-Go/β1/γ22.92025-08-13doi.org/10.1126/sciadv.adu9851
9DYE (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspirone-2.92025-08-13doi.org/10.1126/sciadv.adu9851
9MD1AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspirone-Gz/β1/γ23.032025-08-13doi.org/10.1126/sciadv.adu9851
9MD1 (No Gprot) AAmine5-Hydroxytryptamine5-HT1AHomo sapiensBuspirone-3.032025-08-13doi.org/10.1126/sciadv.adu9851




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