Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:F3 6.604550
2L:L:M6 3.6575410
3L:L:P7 4.2125410
4L:L:?9 8.69833610
5L:L:R10 5.14444910
6R:R:F44 5.3925407
7R:R:N55 4.4475409
8R:R:W74 5.55607
9R:R:N77 3.675409
10R:R:L78 3.865449
11R:R:D82 5.58833649
12R:R:W102 4.82528
13R:R:P103 2.95423
14R:R:F104 2.8725427
15R:R:L118 3.4825405
16R:R:F135 5.51488
17R:R:F139 6.605487
18R:R:W161 4.344509
19R:R:V190 4.1025415
20R:R:F211 4.8125418
21R:R:Y222 8.365478
22R:R:F251 4.0475419
23R:R:I253 1.35435
24R:R:F254 4.218538
25R:R:W255 4.49429719
26R:R:Y258 4.798517
27R:R:T261 3.3725404
28R:R:M265 6.7075414
29R:R:E269 3.38403
30R:R:D282 6.6575414
31R:R:S287 4.1475404
32R:R:Y290 4.248517
33R:R:I291 3.04435
34R:R:Y300 5.955409
35R:R:F307 3.5825409
36R:R:R310 5.31404
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:E180 R:R:R178 10.94364.65NoNo012
2R:R:E180 R:R:F182 12.255611.66NoNo913
3R:R:F182 R:R:P183 14.9472.89NoNo034
4R:R:P183 R:R:P184 16.26611.95NoNo045
5R:R:E179 R:R:P184 17.48921.57NoNo025
6R:R:E179 R:R:V186 18.70875.7NoNo026
7R:R:H101 R:R:V186 20.01352.77NoNo046
8R:R:H101 R:R:P103 21.24723.05NoYes243
9R:R:P103 R:R:W102 23.6722.7YesYes238
10L:L:?8 R:R:W102 34.95345.03NoYes008
11L:L:?8 L:L:P7 20.28024.35NoYes000
12L:L:P7 R:R:D282 14.84394.83YesYes104
13R:R:D282 R:R:M265 19.536.93YesYes144
14R:R:F275 R:R:M265 18.29989.95NoYes134
15R:R:F275 R:R:L268 33.39612.44NoNo032
16R:R:L268 R:R:T274 30.39547.37NoNo021
17R:R:P273 R:R:T274 27.38751.75NoNo021
18R:R:P273 R:R:S272 24.37251.78NoNo024
19R:R:E269 R:R:S272 21.35042.87YesNo034
20R:R:D282 R:R:K279 19.5624.15YesNo144
21R:R:F275 R:R:K279 18.08652.48NoNo134
22L:L:M6 L:L:P7 24.77423.35YesYes100
23L:L:M6 L:L:R10 77.13152.48YesYes100
24L:L:R10 R:R:D282 25.535110.72YesYes104
25L:L:M6 R:R:V190 1003.04YesYes105
26L:L:?9 L:L:R10 36.52147.41YesYes100
27L:L:?9 R:R:L92 19.81447.04YesNo006
28L:L:?9 R:R:Y290 22.81527.15YesYes107
29L:L:R10 R:R:V286 15.78252.62YesNo005
30R:R:V286 R:R:Y290 15.15683.79NoYes057
31L:L:R10 R:R:Y258 36.23698.23YesYes107
32R:R:F44 R:R:L92 19.09627.31YesNo076
33R:R:F44 R:R:S287 42.86432.64YesYes074
34R:R:A40 R:R:S287 33.17931.71NoYes064
35R:R:A40 R:R:S283 31.00331.71NoNo064
36R:R:D37 R:R:S283 28.82034.42NoNo044
37R:R:D37 R:R:V35 13.348.76NoNo043
38R:R:F44 R:R:Y290 36.13743.09YesYes077
39R:R:D37 R:R:I96 13.54269.8NoNo045
40R:R:W255 R:R:Y258 25.32533.86YesYes197
41R:R:F44 R:R:L89 11.24948.53YesNo077
42R:R:R175 R:R:V190 98.35036.54NoYes055
43R:R:P113 R:R:R175 97.85965.76NoNo065
44R:R:P113 R:R:S171 97.44361.78NoNo065
45R:R:S114 R:R:S171 97.04196.52NoNo055
46R:R:S114 R:R:T168 94.14073.2NoNo056
47R:R:L118 R:R:T168 93.63222.95YesNo056
48R:R:L118 R:R:W161 90.98346.83YesYes059
49R:R:N77 R:R:W161 87.57022.26YesYes099
50R:R:L126 R:R:N77 53.24972.75NoYes079
51R:R:L126 R:R:L78 52.32884.15NoYes079
52R:R:D82 R:R:L78 49.36365.43YesYes499
53R:R:D82 R:R:N55 40.59234.04YesYes099
54R:R:A79 R:R:N55 36.6281.56NoYes089
55R:R:A79 R:R:V59 35.58633.39NoNo087
56R:R:T62 R:R:V59 33.48153.17NoNo067
57R:R:T62 R:R:Y300 30.2462.5NoYes069
58R:R:R310 R:R:Y300 27.01774.12YesYes049
59R:R:F307 R:R:R310 12.26625.34YesYes094
60R:R:C157 R:R:N77 44.48556.3NoYes069
61R:R:C157 R:R:W74 43.50072.61NoYes067
62R:R:D133 R:R:W74 18.018913.4NoYes087
63R:R:I130 R:R:W74 23.51565.87NoYes087
64R:R:L117 R:R:Y121 11.57295.86NoNo047
65R:R:I124 R:R:W255 14.76214.7NoYes189
66R:R:I124 R:R:P214 14.21823.39NoNo089
67R:R:I130 R:R:R134 22.43483.76NoNo089
68R:R:R134 R:R:Y222 21.35756.17NoYes098
69R:R:D133 R:R:L137 10.94012.71NoNo688
70R:R:P214 R:R:W213 11.90714.05NoNo095
71R:R:T217 R:R:W213 10.7414.85NoNo055
72R:R:Q259 R:R:Y258 10.02635.64NoYes087
73R:R:V244 R:R:Y222 16.877611.36NoYes078
74R:R:T240 R:R:V244 14.66611.59NoNo077
75R:R:L226 R:R:T240 12.28762.95NoNo057
76R:R:K313 R:R:R310 11.00762.48NoYes044
77L:L:?8 L:L:?9 16.276824.87NoYes000
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:Y1 R:R:P270 4.17 0 No No 0 3 0 1
L:L:S2 R:R:D191 5.89 0 No No 0 4 0 1
L:L:F3 R:R:R178 12.83 5 Yes No 0 2 0 1
L:L:F3 R:R:L187 7.31 5 Yes No 0 4 0 1
L:L:F3 R:R:G189 4.52 5 Yes No 0 4 0 1
L:L:F3 R:R:D191 5.97 5 Yes No 0 4 0 1
L:L:K4 R:R:V190 3.04 1 No Yes 0 5 0 1
L:L:K4 R:R:E199 5.4 1 No No 0 4 0 1
L:L:D5 R:R:L187 6.79 5 No No 0 4 0 1
L:L:M6 R:R:V190 3.04 1 Yes Yes 0 5 0 1
L:L:P7 R:R:D282 4.83 1 Yes Yes 0 4 0 1
L:L:?8 R:R:W102 5.03 0 No Yes 0 8 0 1
L:L:?9 R:R:L92 7.04 1 Yes No 0 6 0 1
L:L:?9 R:R:I116 2.9 1 Yes No 0 6 0 1
L:L:?9 R:R:L117 2.82 1 Yes No 0 4 0 1
L:L:?9 R:R:Y290 7.15 1 Yes Yes 0 7 0 1
L:L:R10 R:R:L117 3.64 1 Yes No 0 4 0 1
L:L:R10 R:R:Y258 8.23 1 Yes Yes 0 7 0 1
L:L:R10 R:R:T261 3.88 1 Yes Yes 0 4 0 1
L:L:R10 R:R:G262 3 1 Yes No 0 5 0 1
L:L:R10 R:R:D282 10.72 1 Yes Yes 0 4 0 1
L:L:R10 R:R:V286 2.62 1 Yes No 0 5 0 1
R:R:F44 R:R:L92 7.31 0 Yes No 7 6 2 1
R:R:F44 R:R:Y290 3.09 0 Yes Yes 7 7 2 1
R:R:A88 R:R:I116 3.25 0 No No 6 6 2 1
R:R:P103 R:R:W102 2.7 2 Yes Yes 3 8 2 1
R:R:F104 R:R:W102 2 2 Yes Yes 7 8 2 1
R:R:C109 R:R:W102 6.53 2 No Yes 9 8 2 1
R:R:C188 R:R:W102 7.84 2 No Yes 9 8 2 1
R:R:F104 R:R:P103 2.89 2 Yes Yes 7 3 2 2
R:R:C109 R:R:C188 5.46 2 No No 9 9 2 2
R:R:I116 R:R:Y290 2.42 1 No Yes 6 7 1 1
R:R:L117 R:R:Y121 5.86 1 No No 4 7 1 2
R:R:M120 R:R:W255 2.33 1 No Yes 7 9 2 2
R:R:M120 R:R:Y258 3.59 1 No Yes 7 7 2 1
R:R:M120 R:R:Y290 4.79 1 No Yes 7 7 2 1
R:R:R175 R:R:V190 6.54 0 No Yes 5 5 2 1
R:R:D191 R:R:V176 5.84 0 No No 4 4 1 2
R:R:E180 R:R:R178 4.65 9 No No 1 2 2 1
R:R:V190 R:R:Y192 3.79 1 Yes No 5 5 1 2
R:R:E199 R:R:Y192 20.2 0 No No 4 5 1 2
R:R:W255 R:R:Y258 3.86 1 Yes Yes 9 7 2 1
R:R:A289 R:R:W255 3.89 1 No Yes 8 9 2 2
R:R:Q259 R:R:Y258 5.64 0 No Yes 8 7 2 1
R:R:A289 R:R:Y258 2.67 1 No Yes 8 7 2 1
R:R:L278 R:R:T261 2.95 0 No Yes 4 4 2 1
R:R:C285 R:R:T261 5.07 0 No Yes 6 4 2 1
R:R:L278 R:R:M265 7.07 0 No Yes 4 4 2 2
R:R:K279 R:R:M265 2.88 1 No Yes 4 4 2 2
R:R:D282 R:R:M265 6.93 1 Yes Yes 4 4 1 2
R:R:E269 R:R:P270 7.86 0 Yes No 3 3 2 1
R:R:D282 R:R:K279 4.15 1 Yes No 4 4 1 2
R:R:V286 R:R:Y290 3.79 0 No Yes 5 7 1 1
R:R:T261 R:R:V260 1.59 0 Yes No 4 6 1 2

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 9KUG_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 1.78
Number of Linked Nodes 267
Number of Links 295
Number of Hubs 36
Number of Links mediated by Hubs 135
Number of Communities 9
Number of Nodes involved in Communities 52
Number of Links involved in Communities 68
Path Summary
Number Of Nodes in MetaPath 78
Number Of Links MetaPath 77
Number of Shortest Paths 52809
Length Of Smallest Path 3
Average Path Length 17.7366
Length of Longest Path 43
Minimum Path Strength 1.18
Average Path Strength 4.61075
Maximum Path Strength 16.14
Minimum Path Correlation 0.7
Average Path Correlation 0.933639
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 2.7027
Average % Of Corr. Nodes 47.0215
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 41.5856
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain   • G protein-coupled receptor-like
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain   • G protein-coupled receptor-like
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeMLE
PDB ResiduesL:L:?8
Environment DetailsOpen EMBL-EBI Page
CodeMLE
NameN-METHYLLEUCINE
Synonyms
Identifier
FormulaC7 H15 N O2
Molecular Weight145.199
SMILES
PubChem2777993
Formal Charge0
Total Atoms25
Total Chiral Atoms1
Total Bonds24
Total Aromatic Bonds0

CodeDAL
PDB ResiduesL:L:?9
Environment DetailsOpen EMBL-EBI Page
CodeDAL
NameD-Alanine
SynonymsD-Alanine
Identifier
FormulaC3 H7 N O2
Molecular Weight89.093
SMILES
PubChem71080
Formal Charge0
Total Atoms13
Total Chiral Atoms1
Total Bonds12
Total Aromatic Bonds0

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP21730
Sequence
>9KUG_nogp_Chain_R
TLRVPDILA LVIFAVVFL VGVLGNALV VWVTAFEAK RTINAIWFL 
NLAVADFLS CLALPILFT SIVQHHHWP FGGAACSIL PSLILLNMY 
ASILLLATI SADRFLLVF KPIWCQNFR GAGLAWIAC AVAWGLALL 
LTIPSFLYR VVREEYFPP KVLCGVDYS HDKRRERAV AIVRLVLGF 
LWPLLTLTI CYTFILLRT WSRRATRST KTLKVVVAV VASFFIFWL 
PYQVTGIMM SFLEPSSPT FLLLKKLDS LCVSFAYIN CCINPIIYV 
VAGQGFQGR LRKSL


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
5O9HAPeptideComplement PeptideC5a1Homo sapiens-NDT9513727-2.72018-01-10doi.org/10.1038/nature25025
6C1QAPeptideComplement PeptideC5a1Homo sapiensPMX53NDT9513727-2.92018-05-30doi.org/10.1038/s41594-018-0067-z
6C1RAPeptideComplement PeptideC5a1Homo sapiensPMX53Avacopan; Na-2.22018-05-30doi.org/10.1038/s41594-018-0067-z
7Y64APeptideComplement PeptideC5a1Homo sapiensC5a-Gi1/β1/γ22.92023-03-01doi.org/10.1038/s41422-023-00779-2
7Y64 (No Gprot) APeptideComplement PeptideC5a1Homo sapiensC5a-2.92023-03-01doi.org/10.1038/s41422-023-00779-2
7Y65APeptideComplement PeptideC5a1Homo sapiensC5a (C-terminal peptide)-Gi1/β1/γ23.22023-03-01doi.org/10.1038/s41422-023-00779-2
7Y65 (No Gprot) APeptideComplement PeptideC5a1Homo sapiensC5a (C-terminal peptide)-3.22023-03-01doi.org/10.1038/s41422-023-00779-2
7Y66APeptideComplement PeptideC5a1Homo sapiensBM213-Gi1/β1/γ22.92023-03-01doi.org/10.1038/s41422-023-00779-2
7Y66 (No Gprot) APeptideComplement PeptideC5a1Homo sapiensBM213-2.92023-03-01doi.org/10.1038/s41422-023-00779-2
7Y67APeptideComplement PeptideC5a1Homo sapiensC089 peptide-Gi1/β1/γ22.82023-03-01doi.org/10.1038/s41422-023-00779-2
7Y67 (No Gprot) APeptideComplement PeptideC5a1Homo sapiensC089 peptide-2.82023-03-01doi.org/10.1038/s41422-023-00779-2
8HK5APeptideComplement PeptideC5a1Homo sapiensC5a-Gi1/β1/γ232023-05-10doi.org/10.1038/s41589-023-01339-w
8HK5 (No Gprot) APeptideComplement PeptideC5a1Homo sapiensC5a-32023-05-10doi.org/10.1038/s41589-023-01339-w
8HPTAPeptideComplement PeptideC5a1Mus musculusC5a (C-terminal peptide)-Go/β1/γ23.392023-10-18doi.org/10.1016/j.cell.2023.09.020
8HPT (No Gprot) APeptideComplement PeptideC5a1Mus musculusC5a (C-terminal peptide)-3.392023-10-18doi.org/10.1016/j.cell.2023.09.020
8HQCAPeptideComplement PeptideC5a1Mus musculusC5a-Go/β1/γ23.892023-10-18doi.org/10.1016/j.cell.2023.09.020
8HQC (No Gprot) APeptideComplement PeptideC5a1Mus musculusC5a-3.892023-10-18doi.org/10.1016/j.cell.2023.09.020
8IA2APeptideComplement PeptideC5a1Homo sapiensC5a-Go/β1/γ23.212023-10-18doi.org/10.1016/j.cell.2023.09.020
8IA2 (No Gprot) APeptideComplement PeptideC5a1Homo sapiensC5a-3.212023-10-18doi.org/10.1016/j.cell.2023.09.020
8JZZAPeptideComplement PeptideC5a1Homo sapiensC5a-des-Arg-Go/β1/γ23.312023-10-18doi.org/10.1016/j.cell.2023.09.020
8JZZ (No Gprot) APeptideComplement PeptideC5a1Homo sapiensC5a-des-Arg-3.312023-10-18doi.org/10.1016/j.cell.2023.09.020
9KWGAPeptideComplement PeptideC5a1Mus musculusC5a-Go/β1/γ23.152025-11-2610.1101/2025.05.26.656101
9KWG (No Gprot) APeptideComplement PeptideC5a1Mus musculusC5a-3.152025-11-2610.1101/2025.05.26.656101
9KWXAPeptideComplement PeptideC5a1Mus musculusC5a-des-Arg-Go/β1/γ23.132025-11-2610.1101/2025.05.26.656101
9KWX (No Gprot) APeptideComplement PeptideC5a1Mus musculusC5a-des-Arg-3.132025-11-2610.1101/2025.05.26.656101
9KX6APeptideComplement PeptideC5a1Mus musculusC5a-des-Arg-Go/β1/γ23.112025-11-2610.1101/2025.05.26.656101
9KX6 (No Gprot) APeptideComplement PeptideC5a1Mus musculusC5a-des-Arg-3.112025-11-2610.1101/2025.05.26.656101
9KXSAPeptideComplement PeptideC5a1Mus musculusEP67-Go/β1/γ23.312025-11-2610.1101/2025.05.26.656101
9KXS (No Gprot) APeptideComplement PeptideC5a1Mus musculusEP67-3.312025-11-2610.1101/2025.05.26.656101
9UMRAPeptideComplement PeptideC5a1Homo sapiensC5a-pep-Go/β1/γ23.152025-11-2610.1101/2025.05.26.656101
9UMR (No Gprot) APeptideComplement PeptideC5a1Homo sapiensC5a-pep-3.152025-11-2610.1101/2025.05.26.656101
9UMXAPeptideComplement PeptideC5a1Homo sapiensEP54-Go/β1/γ23.22025-11-2610.1101/2025.05.26.656101
9UMX (No Gprot) APeptideComplement PeptideC5a1Homo sapiensEP54-3.22025-11-2610.1101/2025.05.26.656101
8JZPAPeptideComplement PeptideC5a1Homo sapiensC5a-Go/β1/γ23.542025-01-15To be published
8JZP (No Gprot) APeptideComplement PeptideC5a1Homo sapiensC5a-3.542025-01-15To be published
9KUGAPeptideComplement PeptideC5a1Homo sapiensEP67-Go/β1/γ23.072025-11-2610.1101/2025.05.26.656101
9KUG (No Gprot) APeptideComplement PeptideC5a1Homo sapiensEP67-3.072025-11-2610.1101/2025.05.26.656101




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