Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:?1 7.31833600
2L:L:K2 3.9425400
3L:L:?4 7.14143710
4L:L:?6 8.28571700
5R:R:I43 4.125405
6R:R:F44 5.6125457
7R:R:W74 5.56167607
8R:R:F75 5.9675408
9R:R:L78 4.06479
10R:R:W102 5.86418
11R:R:L118 3.6625405
12R:R:N119 3.865409
13R:R:F135 6.555408
14R:R:C144 2.215425
15R:R:R148 4.655427
16R:R:W161 3.9925409
17R:R:R175 4.582515
18R:R:P214 3.1725409
19R:R:Y222 6.79408
20R:R:K239 2.6225407
21R:R:F254 4.26448
22R:R:Y258 5.9375407
23R:R:T261 3.3125404
24R:R:Y290 5.986557
25R:R:N296 4.2275479
26R:R:F307 6.2575469
27R:R:R310 5.04564
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:?1 L:L:K2 55.56096.1YesYes000
2L:L:K2 R:R:V190 33.57593.04YesNo005
3L:L:K2 R:R:F275 15.6154.96YesNo003
4L:L:?1 L:L:P3 31.47075.68YesNo000
5L:L:?4 L:L:P3 32.46924.63YesNo100
6L:L:?1 R:R:G189 38.35192.96YesNo004
7L:L:?4 R:R:G189 32.16843.21YesNo104
8L:L:?4 L:L:?5 41.870725.53YesNo000
9L:L:?4 R:R:L92 85.93682.6YesNo006
10L:L:?5 L:L:?6 50.141419.78NoYes000
11L:L:?5 R:R:I116 15.15193.65NoNo006
12L:L:?6 R:R:Y258 45.154911.22YesYes007
13R:R:F44 R:R:L92 85.87073.65YesNo076
14R:R:F44 R:R:S287 42.8097.93YesNo074
15R:R:A40 R:R:S287 15.56091.71NoNo064
16R:R:A40 R:R:S283 13.64813.42NoNo064
17R:R:I96 R:R:S283 11.72333.1NoNo054
18R:R:I43 R:R:S287 26.85717.74YesNo054
19R:R:I291 R:R:I43 11.79552.94NoYes055
20R:R:F44 R:R:L89 76.55343.65YesNo577
21R:R:I116 R:R:Y290 14.83913.63NoYes067
22R:R:F48 R:R:L89 82.59858.53NoNo067
23R:R:F48 R:R:V52 81.66013.93NoNo065
24R:R:R175 R:R:S171 32.64363.95YesNo055
25R:R:S114 R:R:S171 31.35643.26NoNo055
26R:R:S114 R:R:T168 25.76243.2NoNo856
27R:R:L118 R:R:T168 24.73987.37YesNo056
28R:R:L118 R:R:N119 20.62562.75YesYes059
29R:R:N119 R:R:S85 16.4034.47YesNo096
30R:R:C86 R:R:S85 14.97141.72NoNo056
31R:R:C86 R:R:G51 13.52781.96NoNo058
32R:R:G51 R:R:V50 12.07221.84NoNo086
33R:R:F83 R:R:V52 81.2092.62NoNo085
34R:R:F83 R:R:N55 80.34296.04NoNo089
35R:R:D82 R:R:N55 79.91585.39NoNo099
36R:R:D82 R:R:N296 79.27824.04NoYes099
37R:R:L78 R:R:N296 77.47975.49YesYes799
38R:R:F75 R:R:L78 1002.44YesYes089
39R:R:F75 R:R:Y300 37.076716.5YesNo089
40R:R:R310 R:R:Y300 28.4092.06YesNo049
41R:R:F75 R:R:I130 77.37142.51YesNo088
42R:R:I130 R:R:W74 47.04363.52NoYes087
43R:R:D133 R:R:W74 27.224113.4NoYes087
44R:R:D133 R:R:R148 14.3945.96NoYes287
45R:R:C157 R:R:W74 10.06322.61NoYes067
46R:R:W255 R:R:Y258 36.35492.89NoYes097
47R:R:I124 R:R:W255 35.2125.87NoNo089
48R:R:I124 R:R:P214 34.05713.39NoYes089
49R:R:P214 R:R:W213 31.67525.4YesNo095
50R:R:L125 R:R:W213 30.44812.28NoNo065
51R:R:A160 R:R:L125 29.2091.58NoNo066
52R:R:A160 R:R:L126 29.02861.58NoNo067
53R:R:C188 R:R:R175 21.88874.18NoYes195
54R:R:C188 R:R:W102 14.610510.45NoYes198
55R:R:I130 R:R:R134 38.50233.76NoNo089
56R:R:R134 R:R:Y222 37.1973.09NoYes098
57R:R:S131 R:R:Y222 27.260212.72NoYes098
58R:R:C221 R:R:S131 24.21653.44NoNo069
59R:R:D133 R:R:L137 11.32032.71NoNo288
60R:R:C221 R:R:F135 22.67679.78NoYes068
61R:R:C144 R:R:W143 13.08271.31YesNo055
62R:R:V190 R:R:Y192 31.04965.05NoNo055
63R:R:Y174 R:R:Y192 15.771416.88NoNo045
64R:R:E199 R:R:Y192 12.962421.32NoNo045
65R:R:Q259 R:R:Y258 29.95495.64NoYes087
66R:R:L207 R:R:Q259 18.03912.66NoNo058
67R:R:I263 R:R:L207 16.28877.14NoNo055
68R:R:F267 R:R:I263 14.52635.02NoNo045
69R:R:F211 R:R:Q259 10.965411.71NoNo088
70R:R:G304 R:R:R310 11.54891.5NoYes084
71R:R:F275 R:R:L268 10.60453.65NoNo032
72L:L:?4 R:R:R175 47.13994.57YesYes105
73R:R:L126 R:R:L78 28.87825.54NoYes079
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:?1 R:R:R178 12.61 0 Yes No 0 2 0 1
L:L:?1 R:R:L187 5.99 0 Yes No 0 4 0 1
L:L:?1 R:R:G189 2.96 0 Yes No 0 4 0 1
L:L:?1 R:R:D191 10.57 0 Yes No 0 4 0 1
L:L:K2 R:R:V190 3.04 0 Yes No 0 5 0 1
L:L:K2 R:R:F275 4.96 0 Yes No 0 3 0 1
L:L:P3 R:R:K279 10.04 1 No No 0 4 0 1
L:L:?4 R:R:L92 2.6 1 Yes No 0 6 0 1
L:L:?4 R:R:S95 2.82 1 Yes No 0 4 0 1
L:L:?4 R:R:R175 4.57 1 Yes Yes 0 5 0 1
L:L:?4 R:R:G189 3.21 1 Yes No 0 4 0 1
L:L:?4 R:R:K279 6.63 1 Yes No 0 4 0 1
L:L:?5 R:R:I116 3.65 0 No No 0 6 0 1
L:L:?6 R:R:L117 3.31 0 Yes No 0 4 0 1
L:L:?6 R:R:R206 3.88 0 Yes No 0 6 0 1
L:L:?6 R:R:Y258 11.22 0 Yes Yes 0 7 0 1
L:L:?6 R:R:G262 5.46 0 Yes No 0 5 0 1
L:L:?6 R:R:M265 6.77 0 Yes No 0 4 0 1
L:L:?6 R:R:D282 7.58 0 Yes No 0 4 0 1
R:R:F44 R:R:L92 3.65 5 Yes No 7 6 2 1
R:R:F44 R:R:Y290 7.22 5 Yes Yes 7 7 2 2
R:R:H100 R:R:L187 2.57 0 No No 4 4 2 1
R:R:P113 R:R:R175 7.21 0 No Yes 6 5 2 1
R:R:I116 R:R:Y290 3.63 0 No Yes 6 7 1 2
R:R:L117 R:R:Y121 4.69 0 No No 4 7 1 2
R:R:L167 R:R:Y121 8.21 3 No No 4 7 2 2
R:R:R206 R:R:Y121 4.12 3 No No 6 7 1 2
R:R:L167 R:R:R206 4.86 3 No No 4 6 2 1
R:R:R175 R:R:S171 3.95 1 Yes No 5 5 1 2
R:R:C188 R:R:R175 4.18 1 No Yes 9 5 2 1
R:R:G189 R:R:R175 3 1 No Yes 4 5 1 1
R:R:D191 R:R:V176 2.92 0 No No 4 4 1 2
R:R:V190 R:R:Y192 5.05 0 No No 5 5 1 2
R:R:W255 R:R:Y258 2.89 0 No Yes 9 7 2 1
R:R:Q259 R:R:Y258 5.64 0 No Yes 8 7 2 1
R:R:A289 R:R:Y258 4 0 No Yes 8 7 2 1
R:R:G262 R:R:T261 3.64 0 No Yes 5 4 1 2
R:R:L278 R:R:T261 2.95 0 No Yes 4 4 2 2
R:R:L278 R:R:M265 2.83 0 No No 4 4 2 1
R:R:F275 R:R:L268 3.65 0 No No 3 2 1 2
R:R:E269 R:R:P270 6.29 0 No No 3 3 2 1
L:L:K2 R:R:P270 1.67 0 Yes No 0 3 0 1
R:R:A88 R:R:I116 1.62 0 No No 6 6 2 1
R:R:F275 R:R:L276 1.22 0 No No 3 3 1 2

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 9UMR_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 2.44
Number of Linked Nodes 265
Number of Links 278
Number of Hubs 27
Number of Links mediated by Hubs 112
Number of Communities 10
Number of Nodes involved in Communities 36
Number of Links involved in Communities 39
Path Summary
Number Of Nodes in MetaPath 74
Number Of Links MetaPath 73
Number of Shortest Paths 38840
Length Of Smallest Path 3
Average Path Length 14.9185
Length of Longest Path 35
Minimum Path Strength 1.275
Average Path Strength 5.57368
Maximum Path Strength 22.655
Minimum Path Correlation 0.7
Average Path Correlation 0.931601
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 3.22581
Average % Of Corr. Nodes 50.2896
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 34.1623
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function• mu-type opioid receptor binding   • protein binding   • binding   • signaling receptor binding   • G protein-coupled receptor binding   • opioid receptor binding   • guanyl nucleotide binding   • GTP binding   • nucleotide binding   • guanyl ribonucleotide binding   • purine ribonucleotide binding   • purine ribonucleoside triphosphate binding   • nucleoside phosphate binding   • ion binding   • purine nucleotide binding   • anion binding   • heterocyclic compound binding   • carbohydrate derivative binding   • ribonucleotide binding   • small molecule binding   • peptide hormone receptor binding   • corticotropin-releasing hormone receptor binding   • corticotropin-releasing hormone receptor 1 binding   • hormone receptor binding   • neuropeptide receptor binding   • G protein-coupled serotonin receptor binding   • protein-containing complex binding   • G-protein beta/gamma-subunit complex binding   • pyrophosphatase activity   • GTPase activity   • G protein activity   • ribonucleoside triphosphate phosphatase activity   • molecular function regulator activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • cation binding   • metal ion binding   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • cell communication   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction
Gene OntologyBiological Process• cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • cell communication   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction   • heart process   • multicellular organismal process   • system process   • regulation of heart contraction   • regulation of system process   • circulatory system process   • regulation of blood circulation   • regulation of multicellular organismal process   • heart contraction   • blood circulation   • behavior   • locomotory behavior   • transport   • secretion   • export from cell   • membrane docking   • establishment of localization   • vesicle-mediated transport   • localization   • organelle localization by membrane tethering   • secretion by cell   • exocytosis   • organelle localization   • vesicle docking   • exocytic process   • vesicle docking involved in exocytosis   • cellular response to nitrogen compound   • response to dopamine   • cellular response to dopamine   • response to monoamine   • response to catecholamine   • cellular response to catecholamine stimulus   • G protein-coupled dopamine receptor signaling pathway   • response to oxygen-containing compound   • response to nitrogen compound   • cellular response to oxygen-containing compound   • cellular response to chemical stimulus   • cellular response to monoamine stimulus   • response to chemical   • negative regulation of protein transport   • regulation of localization   • establishment of protein localization   • nitrogen compound transport   • negative regulation of biological process   • negative regulation of transport   • negative regulation of secretion   • negative regulation of hormone secretion   • negative regulation of secretion by cell   • intracellular protein localization   • regulation of biological quality   • regulation of peptide hormone secretion   • negative regulation of peptide hormone secretion   • regulation of hormone levels   • establishment of protein localization to extracellular region   • negative regulation of establishment of protein localization   • protein secretion   • regulation of protein secretion   • regulation of secretion   • negative regulation of protein secretion   • regulation of hormone secretion   • regulation of protein localization   • regulation of peptide secretion   • negative regulation of signaling   • hormone secretion   • negative regulation of cell communication   • protein localization to extracellular region   • negative regulation of peptide secretion   • peptide secretion   • regulation of secretion by cell   • signal release   • negative regulation of cellular process   • negative regulation of protein localization   • regulation of signaling   • regulation of transport   • regulation of peptide transport   • regulation of establishment of protein localization   • cell-cell signaling   • regulation of protein transport   • peptide transport   • negative regulation of insulin secretion   • protein transport   • regulation of insulin secretion   • peptide hormone secretion   • macromolecule localization   • hormone transport   • regulation of cell communication   • insulin secretion   • trans-synaptic signaling   • modulation of chemical synaptic transmission   • chemical synaptic transmission   • synaptic signaling   • regulation of trans-synaptic signaling   • anterograde trans-synaptic signaling   • postsynaptic modulation of chemical synaptic transmission   • muscle contraction   • muscle system process   • cell periphery   • postsynapse   • cellular anatomical structure   • postsynaptic membrane   • synapse   • cell junction   • membrane   • plasma membrane   • plasma membrane region   • synaptic membrane   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex
Gene OntologyCellular Component• cell periphery   • postsynapse   • cellular anatomical structure   • postsynaptic membrane   • synapse   • cell junction   • membrane   • plasma membrane   • plasma membrane region   • synaptic membrane   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cytoplasmic side of plasma membrane   • GTPase complex   • extrinsic component of membrane   • extrinsic component of cytoplasmic side of plasma membrane   • parallel fiber to Purkinje cell synapse   • excitatory synapse   • presynapse   • presynaptic membrane   • somatodendritic compartment   • cell projection   • dendrite   • dendritic tree   • neuron projection   • plasma membrane bounded cell projection   • intracellular anatomical structure   • cytoplasm   • GABA-ergic synapse   • glutamatergic synapse   • cell body   • protein binding   • binding   • enzyme binding   • GTPase binding   • protein-containing complex binding   • pyrophosphatase activity   • GTPase activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • signaling receptor complex adaptor activity   • protein-macromolecule adaptor activity   • molecular adaptor activity   • signaling adaptor activity   • multicellular organismal process   • system process   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of taste   • developmental process   • sensory organ development   • eye development   • animal organ development   • retina development in camera-type eye   • visual system development   • multicellular organism development   • camera-type eye development   • anatomical structure development   • sensory system development   • system development   • cell population proliferation   • cellular process   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • signal transduction   • cell communication   • response to ketone   • response to prostaglandin   • response to lipid   • response to endogenous stimulus   • response to alcohol   • cellular response to prostaglandin stimulus   • response to oxygen-containing compound   • cellular response to oxygen-containing compound   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to chemical stimulus   • cellular response to alcohol   • response to hormone   • response to chemical   • cellular response to lipid   • response to prostaglandin E   • cellular response to ketone   • cellular response to hormone stimulus   • small GTPase-mediated signal transduction   • Ras protein signal transduction   • intracellular signal transduction   • intracellular signaling cassette   • phospholipase C-activating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular response to nitrogen compound   • response to dopamine   • cellular response to dopamine   • response to monoamine   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • G protein-coupled dopamine receptor signaling pathway   • response to nitrogen compound   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cellular response to monoamine stimulus   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • synaptic signaling   • cellular response to acetylcholine   • cell-cell signaling   • acetylcholine receptor signaling pathway   • postsynaptic signal transduction   • G protein-coupled acetylcholine receptor signaling pathway   • response to acetylcholine   • extracellular exosome   • membrane-bounded organelle   • extracellular vesicle   • extracellular organelle   • extracellular region   • organelle   • extracellular space   • vesicle   • extracellular membrane-bounded organelle   • non-motile cilium   • 9+0 non-motile cilium   • cilium   • photoreceptor disc membrane   • photoreceptor outer segment   • photoreceptor cell cilium   • organelle membrane   • cytosol   • vacuolar membrane   • lytic vacuole   • vacuole   • intracellular membrane-bounded organelle   • intracellular organelle   • lytic vacuole membrane   • bounding membrane of organelle   • lysosomal membrane   • lysosome   • G-protein beta-subunit binding   • fibroblast proliferation   • neurotransmitter receptor activity   • G protein-coupled amine receptor activity   • G protein-coupled acetylcholine receptor activity   • postsynaptic neurotransmitter receptor activity   • molecular transducer activity   • G protein-coupled receptor activity   • signaling receptor activity   • transmembrane signaling receptor activity   • G protein-coupled neurotransmitter receptor activity   • acetylcholine receptor activity   • opsonin receptor activity   • complement receptor activity   • complement component C5a receptor activity   • immune receptor activity   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • adenylate cyclase-inhibiting G protein-coupled acetylcholine receptor signaling pathway   • cell surface receptor signaling pathway   • trans-synaptic signaling   • anterograde trans-synaptic signaling   • chemical synaptic transmission   • regulation of locomotion   • locomotion   • G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger   • positive regulation of cytosolic calcium ion concentration   • regulation of biological quality   • positive regulation of cell communication   • positive regulation of signal transduction   • positive regulation of biological process   • regulation of signal transduction   • positive regulation of response to stimulus   • positive regulation of ERK1 and ERK2 cascade   • regulation of intracellular signal transduction   • positive regulation of cellular process   • regulation of signaling   • positive regulation of MAPK cascade   • positive regulation of intracellular signal transduction   • regulation of MAPK cascade   • regulation of response to stimulus   • MAPK cascade   • regulation of cell communication   • ERK1 and ERK2 cascade   • regulation of ERK1 and ERK2 cascade   • positive regulation of signaling   • positive regulation of macromolecule biosynthetic process   • positive regulation of metabolic process   • positive regulation of biosynthetic process   • regulation of cytokine production   • cytokine production   • regulation of multicellular organismal process   • positive regulation of macromolecule metabolic process   • regulation of vascular endothelial growth factor production   • regulation of biosynthetic process   • regulation of macromolecule metabolic process   • gene expression   • macromolecule biosynthetic process   • regulation of gene expression   • vascular endothelial growth factor production   • biosynthetic process   • positive regulation of gene expression   • positive regulation of multicellular organismal process   • positive regulation of vascular endothelial growth factor production   • regulation of macromolecule biosynthetic process   • metabolic process   • macromolecule metabolic process   • positive regulation of cytokine production   • regulation of metabolic process   • cellular component organization   • cell junction organization   • presynapse organization   • synapse organization   • cellular component organization or biogenesis   • immune response   • immune system process   • immune response-regulating cell surface receptor signaling pathway   • complement receptor mediated signaling pathway   • immune response-activating signaling pathway   • immune response-regulating signaling pathway   • positive regulation of immune response   • regulation of immune system process   • positive regulation of immune system process   • immune response-activating cell surface receptor signaling pathway   • regulation of immune response   • activation of immune response   • amyloid-beta clearance   • cell chemotaxis   • chemotaxis   • neutrophil chemotaxis   • response to external stimulus   • neutrophil migration   • granulocyte migration   • leukocyte migration   • taxis   • granulocyte chemotaxis   • myeloid leukocyte migration   • cell migration   • cell motility   • leukocyte chemotaxis   • cognition   • positive regulation of cell population proliferation   • positive regulation of epithelial cell proliferation   • regulation of cell population proliferation   • regulation of epithelial cell proliferation   • epithelial cell proliferation   • positive regulation of locomotion   • regulation of cell motility   • positive regulation of chemotaxis   • positive regulation of cell migration   • positive regulation of neutrophil chemotaxis   • regulation of leukocyte chemotaxis   • regulation of leukocyte migration   • positive regulation of leukocyte chemotaxis   • positive regulation of granulocyte chemotaxis   • regulation of neutrophil chemotaxis   • regulation of neutrophil migration   • regulation of response to external stimulus   • regulation of granulocyte chemotaxis   • positive regulation of response to external stimulus   • positive regulation of cell motility   • regulation of cell migration   • positive regulation of leukocyte migration   • positive regulation of neutrophil migration   • regulation of chemotaxis   • macrophage migration   • regulation of mononuclear cell migration   • positive regulation of macrophage migration   • macrophage chemotaxis   • regulation of macrophage migration   • positive regulation of mononuclear cell migration   • regulation of macrophage chemotaxis   • mononuclear cell migration   • positive regulation of macrophage chemotaxis   • cellular developmental process   • astrocyte differentiation   • cell development   • astrocyte activation   • glial cell development   • neurogenesis   • astrocyte development   • gliogenesis   • cell differentiation   • response to stress   • defense response   • cell activation   • nervous system development   • central nervous system development   • glial cell differentiation   • glial cell activation   • inflammatory response   • neuroinflammatory response   • regulation of developmental process   • angiogenesis   • regulation of vasculature development   • positive regulation of developmental process   • tube morphogenesis   • regulation of anatomical structure morphogenesis   • blood vessel development   • regulation of multicellular organismal development   • blood vessel morphogenesis   • tube development   • positive regulation of angiogenesis   • vasculature development   • circulatory system development   • anatomical structure morphogenesis   • positive regulation of vasculature development   • regulation of angiogenesis   • anatomical structure formation involved in morphogenesis   • complement component C5a signaling pathway   • mRNA transcription by RNA polymerase II   • RNA metabolic process   • primary metabolic process   • nucleobase-containing compound biosynthetic process   • mRNA transcription   • mRNA metabolic process   • nucleic acid metabolic process   • nucleobase-containing compound metabolic process   • RNA biosynthetic process   • DNA-templated transcription   • nucleic acid biosynthetic process   • transcription by RNA polymerase II   • cellular defense response   • biological process involved in interspecies interaction between organisms   • response to other organism   • response to biotic stimulus   • response to bacterium   • response to external biotic stimulus   • response to molecule of bacterial origin   • response to peptidoglycan   • myeloid leukocyte activation   • leukocyte activation   • macrophage activation   • leukocyte activation involved in inflammatory response   • microglial cell activation   • defense response to Gram-positive bacterium   • defense response to bacterium   • apical part of cell   • basal part of cell   • basal plasma membrane   • basolateral plasma membrane   • intracellular vesicle   • endomembrane system   • cytoplasmic vesicle membrane   • vesicle membrane   • cytoplasmic vesicle   • secretory granule   • secretory vesicle   • secretory granule membrane
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain   • G protein-coupled receptor-like
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain   • G protein-coupled receptor-like
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeMEA
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodeMEA
NameN-METHYLPHENYLALANINE
Synonyms
Identifier
FormulaC10 H13 N O2
Molecular Weight179.216
SMILES
PubChem6951135
Formal Charge0
Total Atoms26
Total Chiral Atoms1
Total Bonds26
Total Aromatic Bonds6

CodeZAL
PDB ResiduesL:L:?4
Environment DetailsOpen EMBL-EBI Page
CodeZAL
Name3-cyclohexyl-D-alanine
Synonyms
Identifier
FormulaC9 H17 N O2
Molecular Weight171.237
SMILES
PubChem736026
Formal Charge0
Total Atoms29
Total Chiral Atoms1
Total Bonds29
Total Aromatic Bonds0

CodeALC
PDB ResiduesL:L:?5
Environment DetailsOpen EMBL-EBI Page
CodeALC
Name3-Cyclohexyl-L-alanine
Synonyms
  • 3-Cyclohexyl-L-alanine
  • beta-Cyclohexyl-alanine
  • beta-Cyclohexyl-L-alanine
  • β-Cyclohexyl-alanine
Identifier
FormulaC9 H17 N O2
Molecular Weight171.237
SMILES
PubChem712421
Formal Charge0
Total Atoms29
Total Chiral Atoms1
Total Bonds29
Total Aromatic Bonds0

CodeDAR
PDB ResiduesL:L:?6
Environment DetailsOpen EMBL-EBI Page
CodeDAR
NameD-arginine
Synonyms(2R)-2-amino-5-guanidinopentanoic acid
Identifier
FormulaC6 H15 N4 O2
Molecular Weight175.209
SMILES
PubChem17753939
Formal Charge1
Total Atoms27
Total Chiral Atoms1
Total Bonds26
Total Aromatic Bonds0

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP21730
Sequence
>9UMR_nogp_Chain_R
TLRVPDILA LVIFAVVFL VGVLGNALV VWVTAFEAK RTINAIWFL 
NLAVADFLS CLALPILFT SIVQHHHWP FGGAACSIL PSLILLNMY 
ASILLLATI SADRFLLVF KPIWCQNFR GAGLAWIAC AVAWGLALL 
LTIPSFLYR VVREEYFPP KVLCGVDYS HDKRRERAV AIVRLVLGF 
LWPLLTLTI CYTFILLRT WSRRATRST KTLKVVVAV VASFFIFWL 
PYQVTGIMM SFLEPSSPT FLLLKKLDS LCVSFAYIN CCINPIIYV 
VAGQGFQGR LRKS


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
5O9HAPeptideComplement PeptideC5a1Homo sapiens-NDT9513727-2.72018-01-10doi.org/10.1038/nature25025
6C1QAPeptideComplement PeptideC5a1Homo sapiensPMX53NDT9513727-2.92018-05-30doi.org/10.1038/s41594-018-0067-z
6C1RAPeptideComplement PeptideC5a1Homo sapiensPMX53Avacopan; Na-2.22018-05-30doi.org/10.1038/s41594-018-0067-z
7Y64APeptideComplement PeptideC5a1Homo sapiensC5a-Gi1/β1/γ22.92023-03-01doi.org/10.1038/s41422-023-00779-2
7Y64 (No Gprot) APeptideComplement PeptideC5a1Homo sapiensC5a-2.92023-03-01doi.org/10.1038/s41422-023-00779-2
7Y65APeptideComplement PeptideC5a1Homo sapiensC5a (C-terminal peptide)-Gi1/β1/γ23.22023-03-01doi.org/10.1038/s41422-023-00779-2
7Y65 (No Gprot) APeptideComplement PeptideC5a1Homo sapiensC5a (C-terminal peptide)-3.22023-03-01doi.org/10.1038/s41422-023-00779-2
7Y66APeptideComplement PeptideC5a1Homo sapiensBM213-Gi1/β1/γ22.92023-03-01doi.org/10.1038/s41422-023-00779-2
7Y66 (No Gprot) APeptideComplement PeptideC5a1Homo sapiensBM213-2.92023-03-01doi.org/10.1038/s41422-023-00779-2
7Y67APeptideComplement PeptideC5a1Homo sapiensC089 peptide-Gi1/β1/γ22.82023-03-01doi.org/10.1038/s41422-023-00779-2
7Y67 (No Gprot) APeptideComplement PeptideC5a1Homo sapiensC089 peptide-2.82023-03-01doi.org/10.1038/s41422-023-00779-2
8HK5APeptideComplement PeptideC5a1Homo sapiensC5a-Gi1/β1/γ232023-05-10doi.org/10.1038/s41589-023-01339-w
8HK5 (No Gprot) APeptideComplement PeptideC5a1Homo sapiensC5a-32023-05-10doi.org/10.1038/s41589-023-01339-w
8HPTAPeptideComplement PeptideC5a1Mus musculusC5a (C-terminal peptide)-Go/β1/γ23.392023-10-18doi.org/10.1016/j.cell.2023.09.020
8HPT (No Gprot) APeptideComplement PeptideC5a1Mus musculusC5a (C-terminal peptide)-3.392023-10-18doi.org/10.1016/j.cell.2023.09.020
8HQCAPeptideComplement PeptideC5a1Mus musculusC5a-Go/β1/γ23.892023-10-18doi.org/10.1016/j.cell.2023.09.020
8HQC (No Gprot) APeptideComplement PeptideC5a1Mus musculusC5a-3.892023-10-18doi.org/10.1016/j.cell.2023.09.020
8IA2APeptideComplement PeptideC5a1Homo sapiensC5a-Go/β1/γ23.212023-10-18doi.org/10.1016/j.cell.2023.09.020
8IA2 (No Gprot) APeptideComplement PeptideC5a1Homo sapiensC5a-3.212023-10-18doi.org/10.1016/j.cell.2023.09.020
8JZZAPeptideComplement PeptideC5a1Homo sapiensC5a-des-Arg-Go/β1/γ23.312023-10-18doi.org/10.1016/j.cell.2023.09.020
8JZZ (No Gprot) APeptideComplement PeptideC5a1Homo sapiensC5a-des-Arg-3.312023-10-18doi.org/10.1016/j.cell.2023.09.020
9KWGAPeptideComplement PeptideC5a1Mus musculusC5a-Go/β1/γ23.152025-11-2610.1101/2025.05.26.656101
9KWG (No Gprot) APeptideComplement PeptideC5a1Mus musculusC5a-3.152025-11-2610.1101/2025.05.26.656101
9KWXAPeptideComplement PeptideC5a1Mus musculusC5a-des-Arg-Go/β1/γ23.132025-11-2610.1101/2025.05.26.656101
9KWX (No Gprot) APeptideComplement PeptideC5a1Mus musculusC5a-des-Arg-3.132025-11-2610.1101/2025.05.26.656101
9KX6APeptideComplement PeptideC5a1Mus musculusC5a-des-Arg-Go/β1/γ23.112025-11-2610.1101/2025.05.26.656101
9KX6 (No Gprot) APeptideComplement PeptideC5a1Mus musculusC5a-des-Arg-3.112025-11-2610.1101/2025.05.26.656101
9KXSAPeptideComplement PeptideC5a1Mus musculusEP67-Go/β1/γ23.312025-11-2610.1101/2025.05.26.656101
9KXS (No Gprot) APeptideComplement PeptideC5a1Mus musculusEP67-3.312025-11-2610.1101/2025.05.26.656101
9UMRAPeptideComplement PeptideC5a1Homo sapiensC5a-pep-Go/β1/γ23.152025-11-2610.1101/2025.05.26.656101
9UMR (No Gprot) APeptideComplement PeptideC5a1Homo sapiensC5a-pep-3.152025-11-2610.1101/2025.05.26.656101
9UMXAPeptideComplement PeptideC5a1Homo sapiensEP54-Go/β1/γ23.22025-11-2610.1101/2025.05.26.656101
9UMX (No Gprot) APeptideComplement PeptideC5a1Homo sapiensEP54-3.22025-11-2610.1101/2025.05.26.656101
8JZPAPeptideComplement PeptideC5a1Homo sapiensC5a-Go/β1/γ23.542025-01-15To be published
8JZP (No Gprot) APeptideComplement PeptideC5a1Homo sapiensC5a-3.542025-01-15To be published
9KUGAPeptideComplement PeptideC5a1Homo sapiensEP67-Go/β1/γ23.072025-11-2610.1101/2025.05.26.656101
9KUG (No Gprot) APeptideComplement PeptideC5a1Homo sapiensEP67-3.072025-11-2610.1101/2025.05.26.656101




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 9UMR_nogp.zip



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