Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:N88 3.432509
2R:R:M101 4.365407
3R:R:Y108 4.798517
4R:R:T122 6.0025456
5R:R:W135 4.838528
6R:R:F137 6.865426
7R:R:Y151 3.8635
8R:R:F154 7.324506
9R:R:T155 4.18437
10R:R:T159 5.18408
11R:R:R167 6.04167619
12R:R:Y168 4.708578
13R:R:R181 5.21617
14R:R:T210 4.96424
15R:R:F223 7.565496
16R:R:C253 2.37408
17R:R:Y254 5.4775409
18R:R:F291 6.82569
19R:R:W295 5.808568
20R:R:Q316 4.122503
21R:R:W320 5.728504
22R:R:Y338 5.725409
23R:R:F345 5.9375408
24R:R:F349 3.6375406
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:C81 R:R:L123 21.83266.35NoNo067
2R:R:C81 R:R:L85 26.09921.59NoNo066
3R:R:L85 R:R:T120 27.5547.37NoNo065
4R:R:S331 R:R:T120 28.99793.2NoNo095
5R:R:D116 R:R:S331 30.4315.89NoNo099
6R:R:D116 R:R:N88 53.25152.69NoYes099
7R:R:G84 R:R:N88 11.2421.7NoYes089
8R:R:N88 R:R:P335 40.27796.52YesNo099
9R:R:P335 R:R:V91 33.3841.77NoNo099
10R:R:F349 R:R:V91 31.96722.62YesNo069
11R:R:F345 R:R:F349 24.92134.29YesYes086
12R:R:F345 R:R:V94 12.80532.62YesNo087
13R:R:M101 R:R:V94 11.2423.04YesNo077
14R:R:D116 R:R:N334 76.69635.39NoNo099
15R:R:N334 R:R:Y338 77.7064.65NoYes099
16R:R:I109 R:R:Y338 82.34189.67NoYes089
17R:R:I109 R:R:M163 83.29712.92NoNo089
18R:R:M163 R:R:Y108 65.05815.99NoYes097
19R:R:T162 R:R:Y108 71.69154.99NoYes177
20R:R:T159 R:R:T162 76.41953.14YesNo087
21R:R:N111 R:R:T159 77.14158.77NoYes098
22R:R:N111 R:R:N190 13.413314.98NoNo097
23R:R:I107 R:R:N190 11.7744.25NoNo057
24R:R:D166 R:R:R181 10.080313.1NoYes187
25R:R:D166 R:R:Y108 14.37418.05NoYes187
26R:R:M163 R:R:V284 23.39053.04NoNo098
27R:R:N111 R:R:W194 67.66379.04NoNo099
28R:R:L112 R:R:T159 1004.42NoYes098
29R:R:L112 R:R:S156 52.89873NoNo099
30R:R:L112 R:R:L160 48.42045.54NoNo098
31R:R:L123 R:R:Y328 15.77465.86NoNo077
32R:R:Q126 R:R:Y328 12.66965.64NoNo067
33R:R:N152 R:R:S156 22.41882.98NoNo089
34R:R:W194 R:R:Y151 62.20282.89NoYes395
35R:R:S147 R:R:Y151 51.63392.54NoYes065
36R:R:M205 R:R:S147 50.39636.13NoNo056
37R:R:K143 R:R:M205 50.206310.08NoNo065
38R:R:A208 R:R:K143 48.89263.21NoNo056
39R:R:A208 R:R:I146 38.12833.25NoNo054
40R:R:C219 R:R:I146 32.55351.64NoNo094
41R:R:C142 R:R:C219 31.19647.28NoNo099
42R:R:C142 R:R:W135 10.84036.53NoYes298
43R:R:C142 R:R:T210 18.8853.38NoYes294
44R:R:I217 R:R:T210 14.6513.04NoYes044
45R:R:N152 R:R:W295 20.61673.39NoYes088
46R:R:I298 R:R:W295 62.57192.35NoYes068
47R:R:I298 R:R:W320 56.99712.35NoYes064
48R:R:H321 R:R:W320 11.5086.35NoYes044
49R:R:F291 R:R:S156 31.29413.96YesNo099
50R:R:F291 R:R:W295 48.127213.03YesYes698
51R:R:F291 R:R:L160 39.4426.09YesNo098
52R:R:F291 R:R:I157 15.29153.77YesNo097
53R:R:I157 R:R:P246 13.32656.77NoNo078
54R:R:V284 R:R:Y254 22.31033.79NoYes089
55R:R:S164 R:R:Y254 25.12763.82NoYes099
56R:R:I250 R:R:S164 28.97084.64NoNo089
57R:R:I250 R:R:V288 29.01424.61NoNo088
58R:R:C253 R:R:S164 29.85023.44YesNo089
59R:R:C253 R:R:Y168 25.26872.69YesYes088
60R:R:C172 R:R:Y168 12.74029.41NoYes778
61R:R:C172 R:R:R260 11.64375.57NoNo075
62R:R:A208 R:R:L221 11.30171.58NoNo054
63R:R:V302 R:R:W320 14.62922.45NoYes054
64R:R:K235 R:R:V302 11.68173.04NoNo045
65R:R:I292 R:R:V288 20.13351.54NoNo068
66R:R:I292 R:R:V247 18.94471.54NoNo066
67R:R:F243 R:R:V247 16.55635.24NoNo086
68R:R:F243 R:R:I244 10.30293.77NoNo084
69R:R:F239 R:R:I244 14.8415.02NoNo064
70R:R:M245 R:R:P246 11.36683.35NoNo058
71R:R:R260 R:R:V264 10.4062.62NoNo056
72R:R:F291 R:R:N330 10.03697.25YesNo699
73R:R:K305 R:R:W320 26.175210.44NoYes034
74R:R:K305 R:R:Q316 23.52622.71NoYes033
75R:R:Q316 R:R:T313 11.93685.67YesNo033
76R:R:L160 R:R:V288 26.67462.98NoNo088
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


PDB Summary
PDB 9MQH
Class A
SubFamily Peptide
Type Opioid
SubType MOP
Species Homo Sapiens
Ligand -
Other Ligand(s) -
Protein Partners -
PDB Resolution 3.9
Date 2025-02-12
D.O.I. doi.org/10.1101/2025.01.09.632033
Net Summary
Imin 2.35
Number of Linked Nodes 251
Number of Links 268
Number of Hubs 24
Number of Links mediated by Hubs 104
Number of Communities 9
Number of Nodes involved in Communities 38
Number of Links involved in Communities 43
Path Summary
Number Of Nodes in MetaPath 77
Number Of Links MetaPath 76
Number of Shortest Paths 39034
Length Of Smallest Path 3
Average Path Length 15.6925
Length of Longest Path 35
Minimum Path Strength 1.305
Average Path Strength 4.87595
Maximum Path Strength 16.12
Minimum Path Correlation 0.7
Average Path Correlation 0.926224
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 3.84615
Average % Of Corr. Nodes 48.795
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 26.9577
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function• molecular transducer activity   • G protein-coupled receptor activity   • transmembrane signaling receptor activity   • signaling receptor activity   • calcium channel activity   • monoatomic cation transmembrane transporter activity   • voltage-gated calcium channel activity   • gated channel activity   • monoatomic ion channel activity   • voltage-gated channel activity   • voltage-gated monoatomic ion channel activity   • voltage-gated monoatomic cation channel activity   • monoatomic cation channel activity   • passive transmembrane transporter activity   • calcium ion transmembrane transporter activity   • channel activity   • monoatomic ion transmembrane transporter activity   • transporter activity   • metal ion transmembrane transporter activity   • transmembrane transporter activity   • protein binding   • binding   • G-protein beta-subunit binding   • neuropeptide binding   • peptide binding   • G-protein alpha-subunit binding   • peptide receptor activity   • beta-endorphin receptor activity   • G protein-coupled opioid receptor activity   • G protein-coupled peptide receptor activity   • melanocortin receptor activity   • neuropeptide receptor activity   • morphine receptor activity   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • cell communication   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction   • neuropeptide signaling pathway   • cellular response to nitrogen compound   • synaptic signaling   • cellular response to acetylcholine
Gene OntologyBiological Process• cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • cell communication   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction   • neuropeptide signaling pathway   • cellular response to nitrogen compound   • synaptic signaling   • cellular response to acetylcholine   • response to oxygen-containing compound   • cell-cell signaling   • response to nitrogen compound   • acetylcholine receptor signaling pathway   • postsynaptic signal transduction   • cellular response to oxygen-containing compound   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • cellular response to chemical stimulus   • G protein-coupled acetylcholine receptor signaling pathway   • response to chemical   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • response to acetylcholine   • adenylate cyclase-inhibiting G protein-coupled acetylcholine receptor signaling pathway   • positive regulation of cell communication   • positive regulation of signal transduction   • positive regulation of biological process   • regulation of signal transduction   • intracellular signal transduction   • positive regulation of response to stimulus   • positive regulation of ERK1 and ERK2 cascade   • regulation of intracellular signal transduction   • intracellular signaling cassette   • positive regulation of cellular process   • regulation of signaling   • positive regulation of MAPK cascade   • positive regulation of intracellular signal transduction   • regulation of MAPK cascade   • regulation of response to stimulus   • MAPK cascade   • regulation of cell communication   • ERK1 and ERK2 cascade   • regulation of ERK1 and ERK2 cascade   • positive regulation of signaling   • regulation of localization   • transport   • regulation of signaling receptor activity   • regulation of transmembrane transporter activity   • localization   • regulation of NMDA receptor activity   • regulation of transport   • establishment of localization   • transmembrane transport   • regulation of molecular function   • regulation of transmembrane transport   • regulation of neurotransmitter receptor activity   • G protein-coupled opioid receptor signaling pathway   • regulation of cellular response to stress   • cellular response to stress   • regulation of response to stress   • response to stress   • regulation of biosynthetic process   • regulation of nitric oxide biosynthetic process   • negative regulation of metabolic process   • negative regulation of biological process   • reactive nitrogen species metabolic process   • nitric oxide metabolic process   • nitric oxide biosynthetic process   • biosynthetic process   • negative regulation of nitric oxide biosynthetic process   • negative regulation of biosynthetic process   • negative regulation of cellular process   • metabolic process   • regulation of nitric oxide metabolic process   • regulation of metabolic process   • multicellular organismal process   • system process   • sensory perception   • nervous system process   • behavior   • adult behavior   • response to alcohol   • behavioral response to ethanol   • response to ethanol   • negative regulation of cell population proliferation   • cell population proliferation   • regulation of cell population proliferation   • phospholipase C-activating G protein-coupled receptor signaling pathway   • regulation of biological quality   • negative regulation of cytosolic calcium ion concentration   • positive regulation of nervous system development   • regulation of developmental process   • cellular developmental process   • cell development   • regulation of cell differentiation   • regulation of neurogenesis   • regulation of cell development   • regulation of nervous system development   • positive regulation of developmental process   • multicellular organism development   • neurogenesis   • positive regulation of cell differentiation   • cell differentiation   • anatomical structure development   • positive regulation of neurogenesis   • regulation of multicellular organismal process   • system development   • developmental process   • regulation of multicellular organismal development   • positive regulation of cell development   • nervous system development   • positive regulation of multicellular organismal process   • sensory perception of pain   • negative regulation of protein transport   • establishment of protein localization   • nitrogen compound transport   • regulation of protein localization   • negative regulation of signaling   • negative regulation of Wnt protein secretion   • negative regulation of transport   • negative regulation of cell communication   • protein localization to extracellular region   • secretion by cell   • regulation of secretion by cell   • negative regulation of secretion   • signal release   • negative regulation of secretion by cell   • intracellular protein localization   • regulation of Wnt protein secretion   • negative regulation of protein localization   • secretion   • establishment of protein localization to extracellular region   • regulation of establishment of protein localization   • export from cell   • negative regulation of establishment of protein localization   • regulation of protein transport   • Wnt protein secretion   • protein secretion   • regulation of protein secretion   • regulation of secretion   • negative regulation of protein secretion   • protein transport   • macromolecule localization   • G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger   • somatodendritic compartment   • cell body   • cellular anatomical structure   • perikaryon   • neuronal cell body   • cell periphery   • plasma membrane   • membrane   • cell projection   • dendrite   • dendritic tree   • neuron projection   • plasma membrane bounded cell projection   • membrane-bounded organelle
Gene OntologyCellular Component• somatodendritic compartment   • cell body   • cellular anatomical structure   • perikaryon   • neuronal cell body   • cell periphery   • plasma membrane   • membrane   • cell projection   • dendrite   • dendritic tree   • neuron projection   • plasma membrane bounded cell projection   • membrane-bounded organelle   • intracellular organelle   • intracellular anatomical structure   • Golgi apparatus   • organelle   • cytoplasm   • intracellular membrane-bounded organelle   • endomembrane system   • endosome   • intracellular vesicle   • cytoplasmic vesicle   • vesicle   • synapse   • cell junction   • axon   • endoplasmic reticulum
SCOP2Domain Identifier
SCOP2Family Identifier
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP35372
Sequence
>9MQH_Chain_R
TIMALYSIV CVVGLFGNF LVMYVIVRY TKMKTATNI YIFNLALAD 
ALATSTLPF QSVNYLMGT WPFGTILCK IVISIDYYN MFTSIFTLC 
TMSVDRYIA VCHPVKALD FRTPRNAKI INVCNWILS SAIGLPVMF 
MATTKYRQG SIDCTLTFS TWYWENLLK ICVFIFAFI MPVLIITVC 
YGLMILRLK SVRLSGSEK DRNLRRITR MVLVVVAVF IVCWTPIHI 
YVIIKALVT IPETTFQTV SWHFCIALG YTNSCLNPV LYAFLDENF 
KRCFREFCI LR


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
9BJKAPeptideOpioidμMus musculusNaloxoneNAM-3.262024-07-17doi.org/10.1038/s41586-024-07587-7
8K9LAPeptideOpioidμHomo sapiensDamgoBMS-986122Gi3/β1/γ13.052024-05-29doi.org/10.1038/s41467-024-47792-6
8K9L (No Gprot) APeptideOpioidμHomo sapiensDamgoBMS-9861223.052024-05-29doi.org/10.1038/s41467-024-47792-6
7SBFAPeptideOpioidμMus musculusPZM21-Gi1/β1/γ22.92022-04-20doi.org/10.1002/anie.202200269
7SBF (No Gprot) APeptideOpioidμMus musculusPZM21-2.92022-04-20doi.org/10.1002/anie.202200269
7SCGAPeptideOpioidμMus musculusFH210-Gi1/β1/γ232022-04-20doi.org/10.1002/anie.202200269
7SCG (No Gprot) APeptideOpioidμMus musculusFH210-32022-04-20doi.org/10.1002/anie.202200269
8EF5APeptideOpioidμHomo sapiensFentanyl-Gi1/β1/γ23.32022-11-09doi.org/10.1016/j.cell.2022.09.041
8EF5 (No Gprot) APeptideOpioidμHomo sapiensFentanyl-3.32022-11-09doi.org/10.1016/j.cell.2022.09.041
8EF6APeptideOpioidμHomo sapiensMorphine-Gi1/β1/γ23.22022-11-09doi.org/10.1016/j.cell.2022.09.041
8EF6 (No Gprot) APeptideOpioidμHomo sapiensMorphine-3.22022-11-09doi.org/10.1016/j.cell.2022.09.041
8EFBAPeptideOpioidμHomo sapiensOliceridine-Gi1/β1/γ23.22022-11-09doi.org/10.1016/j.cell.2022.09.041
8EFB (No Gprot) APeptideOpioidμHomo sapiensOliceridine-3.22022-11-09doi.org/10.1016/j.cell.2022.09.041
8EFLAPeptideOpioidμHomo sapiensSR17018-Gi1/β1/γ23.22022-11-09doi.org/10.1016/j.cell.2022.09.041
8EFL (No Gprot) APeptideOpioidμHomo sapiensSR17018-3.22022-11-09doi.org/10.1016/j.cell.2022.09.041
8EFOAPeptideOpioidμHomo sapiensPZM21-Gi1/β1/γ22.82022-11-09doi.org/10.1016/j.cell.2022.09.041
8EFO (No Gprot) APeptideOpioidμHomo sapiensPZM21-2.82022-11-09doi.org/10.1016/j.cell.2022.09.041
8EFQAPeptideOpioidμHomo sapiensDamgo-Gi1/β1/γ23.32022-11-09doi.org/10.1016/j.cell.2022.09.041
8EFQ (No Gprot) APeptideOpioidμHomo sapiensDamgo-3.32022-11-09doi.org/10.1016/j.cell.2022.09.041
8F7QAPeptideOpioidμHomo sapiensβ-Endorphin-Gi1/β1/γ23.222022-12-14doi.org/10.1016/j.cell.2022.12.026
8F7Q (No Gprot) APeptideOpioidμHomo sapiensβ-Endorphin-3.222022-12-14doi.org/10.1016/j.cell.2022.12.026
8F7RAPeptideOpioidμHomo sapiensEndomorphin-Gi1/β1/γ23.282022-12-14doi.org/10.1016/j.cell.2022.12.026
8F7R (No Gprot) APeptideOpioidμHomo sapiensEndomorphin-3.282022-12-14doi.org/10.1016/j.cell.2022.12.026
9BQJAPeptideOpioidμMus musculusRO76-Gi1/β1/γ23.32024-09-11doi.org/10.1021/acscentsci.4c00525
9BQJ (No Gprot) APeptideOpioidμMus musculusRO76-3.32024-09-11doi.org/10.1021/acscentsci.4c00525
4DKLAPeptideOpioidμMus musculusβ-Funaltrexamine--2.82012-03-21doi.org/10.1038/nature10954
5C1MAPeptideOpioidμMus musculusBU72--2.072015-08-05doi.org/10.1038/nature14886
8K9KAPeptideOpioidμHomo sapiensDamgo-Gi3/β1/γ12.982024-05-29doi.org/10.1038/s41467-024-47792-6
8K9K (No Gprot) APeptideOpioidμHomo sapiensDamgo-2.982024-05-29doi.org/10.1038/s41467-024-47792-6
6DDEAPeptideOpioidμMus musculusDamgo-Gi1/β1/γ23.52018-06-13doi.org/10.1038/s41586-018-0219-7
6DDE (No Gprot) APeptideOpioidμMus musculusDamgo-3.52018-06-13doi.org/10.1038/s41586-018-0219-7
6DDFAPeptideOpioidμMus musculusDamgo-Gi1/β1/γ23.52018-06-13doi.org/10.1038/s41586-018-0219-7
6DDF (No Gprot) APeptideOpioidμMus musculusDamgo-3.52018-06-13doi.org/10.1038/s41586-018-0219-7
7U2LAPeptideOpioidμMus musculusPubChem 163201242-Gi1/β1/γ23.22022-05-04doi.org/10.1038/s41586-022-05588-y
7U2L (No Gprot) APeptideOpioidμMus musculusPubChem 163201242-3.22022-05-04doi.org/10.1038/s41586-022-05588-y
7U2KAPeptideOpioidμMus musculusC6-guano-Gi1/β1/γ23.32022-12-07doi.org/10.1038/s41586-022-05588-y
7U2K (No Gprot) APeptideOpioidμMus musculusC6-guano-3.32022-12-07doi.org/10.1038/s41586-022-05588-y
7T2GAPeptideOpioidμMus musculusMitragynine Pseudoindoxyl-Gi1/β1/γ22.52022-12-07doi.org/10.1038/s41589-022-01208-y
7T2G (No Gprot) APeptideOpioidμMus musculusMitragynine Pseudoindoxyl-2.52022-12-07doi.org/10.1038/s41589-022-01208-y
7T2HAPeptideOpioidμMus musculusLofentanil-Gi1/β1/γ22.52022-12-07doi.org/10.1038/s41589-022-01208-y
7T2H (No Gprot) APeptideOpioidμMus musculusLofentanil-2.52022-12-07doi.org/10.1038/s41589-022-01208-y
7UL4APeptideOpioidμMus musculusAlvimopan--2.82022-06-29doi.org/10.1038/s41594-022-00859-8
8QOTAPeptideOpioidμMus musculusNanobody-E--3.22023-12-27doi.org/10.1101/2023.12.06.570395
9MQIAPeptideOpioidμHomo sapiensIsoquinuclidine--3.32025-02-12doi.org/10.1101/2025.01.09.632033
9MQJAPeptideOpioidμHomo sapiensIsoquinuclidine--3.232025-02-12doi.org/10.1101/2025.01.09.632033
8E0GAPeptideOpioidμMus musculusBU72--2.12023-10-18doi.org/10.1186/s12915-023-01689-w
8Y73APeptideOpioidμHomo sapiensPeptideMPAM-15Gi1/β1/γ22.842025-08-06To be published
8Y73 (No Gprot) APeptideOpioidμHomo sapiensPeptideMPAM-152.842025-08-06To be published
8Y72APeptideOpioidμHomo sapiensPeptideBMS-986122Gi1/β1/γ22.652025-08-06To be published
8Y72 (No Gprot) APeptideOpioidμHomo sapiensPeptideBMS-9861222.652025-08-06To be published




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 9MQH.zip



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You can also  read or  download a guide explaining the meaning of all files and numerical data.