Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:Y77 7.18407
2R:R:N88 4.8075409
3R:R:V91 3.345409
4R:R:Y108 6.722507
5R:R:D116 7.015409
6R:R:W135 9.48667618
7R:R:F137 7.812506
8R:R:D149 8.6925415
9R:R:Y151 5.036535
10R:R:N152 6.15408
11R:R:F154 4.8525406
12R:R:T155 7.6225437
13R:R:Y168 7.42448
14R:R:H173 3.4475446
15R:R:W194 9.4075439
16R:R:I217 4.0675404
17R:R:C219 7.95419
18R:R:F223 5.57667606
19R:R:F239 6.21416
20R:R:F243 5.072518
21R:R:I244 2.61414
22R:R:Y254 7.715419
23R:R:L261 3.5725458
24R:R:F291 5.5025419
25R:R:W295 7.268518
26R:R:T296 5.045405
27R:R:H299 5.55517
28R:R:Q316 5.7225403
29R:R:W320 7.145404
30R:R:H321 10.72424
31R:R:Y328 6.2075417
32R:R:N330 7.4775419
33R:R:N334 7.525419
34R:R:L337 4.4175408
35R:R:Y338 5.522519
36R:R:F345 4.3408
37L:L:?1 8.4841010
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:H321 R:R:Y77 24.768913.07YesYes047
2R:R:L123 R:R:Y77 46.3535.86NoYes077
3R:R:I324 R:R:Y77 16.45127.25NoYes057
4R:R:I324 R:R:W320 15.07678.22NoYes054
5R:R:H321 R:R:W320 15.43455.29YesYes044
6R:R:N88 R:R:T120 13.19572.92YesNo095
7R:R:D116 R:R:N88 54.08626.73YesYes099
8R:R:D116 R:R:N334 58.88988.08YesYes099
9R:R:N330 R:R:N334 1008.17YesYes199
10R:R:N330 R:R:W295 93.25529.04YesYes198
11R:R:M153 R:R:W295 59.6555.82NoYes078
12L:L:?1 R:R:M153 58.790610.13YesNo007
13L:L:?1 R:R:Y328 53.12984.2YesYes107
14R:R:L123 R:R:Y328 52.62324.69NoYes077
15R:R:H299 R:R:W295 64.7887.41YesYes178
16L:L:?1 R:R:H299 66.09515.76YesYes107
17R:R:N88 R:R:P335 40.29194.89YesNo099
18R:R:L337 R:R:V290 11.44572.98YesNo087
19R:R:L337 R:R:Y338 16.82315.86YesYes089
20R:R:N334 R:R:Y338 63.83866.98YesYes199
21R:R:I95 R:R:V91 32.40643.07NoYes079
22R:R:P335 R:R:V91 36.3813.53NoYes099
23R:R:N106 R:R:T99 11.75745.85NoNo086
24R:R:F345 R:R:N106 16.04384.83YesNo088
25R:R:F345 R:R:I95 21.48855.02YesNo087
26R:R:F110 R:R:I95 10.31213.77NoNo067
27R:R:M163 R:R:Y108 48.96745.99NoYes097
28R:R:M163 R:R:Y338 49.97344.79NoYes099
29R:R:D166 R:R:Y108 12.66075.75NoYes087
30R:R:N190 R:R:Y108 31.690811.63NoYes077
31R:R:N111 R:R:N190 30.39079.54NoNo097
32R:R:N111 R:R:W194 29.08365.65NoYes099
33R:R:W194 R:R:Y151 18.140911.58YesYes395
34R:R:F137 R:R:W135 19.189518.04YesYes068
35R:R:N129 R:R:W135 21.65159.04NoYes048
36L:L:?1 R:R:N129 22.74266.15YesNo004
37R:R:C219 R:R:W135 21.534616.98YesYes198
38L:L:?1 R:R:C219 35.95594.27YesYes109
39R:R:S216 R:R:T134 11.23313.2NoNo015
40R:R:I217 R:R:T134 14.02464.56YesNo045
41R:R:I217 R:R:W135 19.64653.52YesYes048
42L:L:?1 R:R:Y150 26.788111.55YesNo004
43R:R:L221 R:R:Y150 24.2413.52NoNo044
44R:R:F291 R:R:I250 31.04967.54YesNo198
45R:R:F291 R:R:W295 27.59227.02YesYes198
46R:R:I250 R:R:S164 11.10914.64NoNo189
47R:R:C253 R:R:S164 14.79683.44NoNo089
48R:R:I250 R:R:Y254 19.13643.63NoYes189
49R:R:R167 R:R:Y254 12.04798.23NoYes099
50R:R:R167 R:R:Y338 12.21444.12NoYes099
51R:R:C253 R:R:Y168 12.32428.06NoYes088
52R:R:L261 R:R:L267 10.76914.15YesNo081
53R:R:L267 R:R:L277 17.49979.69NoNo016
54R:R:L277 R:R:T281 18.63332.95NoNo066
55R:R:I258 R:R:T281 21.26896.08NoNo056
56R:R:I258 R:R:V284 23.87264.61NoNo058
57R:R:V284 R:R:Y254 24.97438.83NoYes089
58R:R:F223 R:R:L221 22.97643.65YesNo064
59R:R:F223 R:R:W230 11.77872YesNo061
60R:R:F243 R:R:H299 11.53074.53YesYes187
61R:R:Q316 R:R:Y301 19.73864.51YesNo035
62R:R:W320 R:R:Y301 25.21525.79YesNo045
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
R:R:D149 R:R:T122 5.78 1 Yes No 5 6 1 2
R:R:L123 R:R:Y328 4.69 0 No Yes 7 7 2 1
R:R:D149 R:R:Q126 3.92 1 Yes No 5 6 1 1
R:R:Q126 R:R:Y328 7.89 1 No Yes 6 7 1 1
L:L:?1 R:R:Q126 16.7 1 Yes No 0 6 0 1
R:R:N129 R:R:W135 9.04 0 No Yes 4 8 1 2
L:L:?1 R:R:N129 6.15 1 Yes No 0 4 0 1
R:R:C142 R:R:W135 6.53 1 No Yes 9 8 2 2
R:R:C219 R:R:W135 16.98 1 Yes Yes 9 8 1 2
R:R:C142 R:R:C219 7.28 1 No Yes 9 9 2 1
R:R:C219 R:R:I146 3.27 1 Yes No 9 4 1 2
R:R:D149 R:R:Y328 8.05 1 Yes Yes 5 7 1 1
L:L:?1 R:R:D149 17.02 1 Yes Yes 0 5 0 1
R:R:V204 R:R:Y150 3.79 0 No No 5 4 2 1
R:R:L221 R:R:Y150 3.52 0 No No 4 4 2 1
L:L:?1 R:R:Y150 11.55 1 Yes No 0 4 0 1
R:R:F154 R:R:M153 3.73 0 Yes No 6 7 2 1
R:R:M153 R:R:W295 5.82 0 No Yes 7 8 1 2
L:L:?1 R:R:M153 10.13 1 Yes No 0 7 0 1
R:R:A242 R:R:F154 4.16 0 No Yes 5 6 2 2
L:L:?1 R:R:C219 4.27 1 Yes Yes 0 9 0 1
R:R:F239 R:R:F243 5.36 1 Yes Yes 6 8 2 2
R:R:F239 R:R:H299 5.66 1 Yes Yes 6 7 2 1
R:R:A242 R:R:H299 4.39 0 No Yes 5 7 2 1
R:R:F243 R:R:H299 4.53 1 Yes Yes 8 7 2 1
R:R:H299 R:R:W295 7.41 1 Yes Yes 7 8 1 2
R:R:C323 R:R:I298 3.27 0 No No 6 6 2 1
L:L:?1 R:R:I298 6.39 1 Yes No 0 6 0 1
L:L:?1 R:R:H299 5.76 1 Yes Yes 0 7 0 1
L:L:?1 R:R:Y328 4.2 1 Yes Yes 0 7 0 1
L:L:?1 R:R:V302 2.67 1 Yes No 0 5 0 1
R:R:G327 R:R:I298 1.76 0 No No 7 6 2 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 8EFL_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3.07
Number of Linked Nodes 268
Number of Links 286
Number of Hubs 37
Number of Links mediated by Hubs 135
Number of Communities 5
Number of Nodes involved in Communities 36
Number of Links involved in Communities 46
Path Summary
Number Of Nodes in MetaPath 63
Number Of Links MetaPath 62
Number of Shortest Paths 56745
Length Of Smallest Path 3
Average Path Length 13.401
Length of Longest Path 27
Minimum Path Strength 1.36
Average Path Strength 6.26806
Maximum Path Strength 17.51
Minimum Path Correlation 0.7
Average Path Correlation 0.922427
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 4.34783
Average % Of Corr. Nodes 48.506
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 52.155
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function• molecular transducer activity   • G protein-coupled receptor activity   • transmembrane signaling receptor activity   • signaling receptor activity   • calcium channel activity   • monoatomic cation transmembrane transporter activity   • voltage-gated calcium channel activity   • gated channel activity   • monoatomic ion channel activity   • voltage-gated channel activity   • voltage-gated monoatomic ion channel activity   • voltage-gated monoatomic cation channel activity   • monoatomic cation channel activity   • passive transmembrane transporter activity   • calcium ion transmembrane transporter activity   • channel activity   • monoatomic ion transmembrane transporter activity   • transporter activity   • metal ion transmembrane transporter activity   • transmembrane transporter activity   • protein binding   • binding   • G-protein beta-subunit binding   • neuropeptide binding   • peptide binding   • G-protein alpha-subunit binding   • peptide receptor activity   • beta-endorphin receptor activity   • G protein-coupled opioid receptor activity   • G protein-coupled peptide receptor activity   • melanocortin receptor activity   • neuropeptide receptor activity   • morphine receptor activity   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • cell communication   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction   • neuropeptide signaling pathway   • cellular response to nitrogen compound   • synaptic signaling   • cellular response to acetylcholine
Gene OntologyBiological Process• cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • cell communication   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction   • neuropeptide signaling pathway   • cellular response to nitrogen compound   • synaptic signaling   • cellular response to acetylcholine   • response to oxygen-containing compound   • cell-cell signaling   • response to nitrogen compound   • acetylcholine receptor signaling pathway   • postsynaptic signal transduction   • cellular response to oxygen-containing compound   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • cellular response to chemical stimulus   • G protein-coupled acetylcholine receptor signaling pathway   • response to chemical   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • response to acetylcholine   • adenylate cyclase-inhibiting G protein-coupled acetylcholine receptor signaling pathway   • positive regulation of cell communication   • positive regulation of signal transduction   • positive regulation of biological process   • regulation of signal transduction   • intracellular signal transduction   • positive regulation of response to stimulus   • positive regulation of ERK1 and ERK2 cascade   • regulation of intracellular signal transduction   • intracellular signaling cassette   • positive regulation of cellular process   • regulation of signaling   • positive regulation of MAPK cascade   • positive regulation of intracellular signal transduction   • regulation of MAPK cascade   • regulation of response to stimulus   • MAPK cascade   • regulation of cell communication   • ERK1 and ERK2 cascade   • regulation of ERK1 and ERK2 cascade   • positive regulation of signaling   • regulation of localization   • transport   • regulation of signaling receptor activity   • regulation of transmembrane transporter activity   • localization   • regulation of NMDA receptor activity   • regulation of transport   • establishment of localization   • transmembrane transport   • regulation of molecular function   • regulation of transmembrane transport   • regulation of neurotransmitter receptor activity   • G protein-coupled opioid receptor signaling pathway   • regulation of cellular response to stress   • cellular response to stress   • regulation of response to stress   • response to stress   • regulation of biosynthetic process   • regulation of nitric oxide biosynthetic process   • negative regulation of metabolic process   • negative regulation of biological process   • reactive nitrogen species metabolic process   • nitric oxide metabolic process   • nitric oxide biosynthetic process   • biosynthetic process   • negative regulation of nitric oxide biosynthetic process   • negative regulation of biosynthetic process   • negative regulation of cellular process   • metabolic process   • regulation of nitric oxide metabolic process   • regulation of metabolic process   • multicellular organismal process   • system process   • sensory perception   • nervous system process   • behavior   • adult behavior   • response to alcohol   • behavioral response to ethanol   • response to ethanol   • negative regulation of cell population proliferation   • cell population proliferation   • regulation of cell population proliferation   • phospholipase C-activating G protein-coupled receptor signaling pathway   • regulation of biological quality   • negative regulation of cytosolic calcium ion concentration   • positive regulation of nervous system development   • regulation of developmental process   • cellular developmental process   • cell development   • regulation of cell differentiation   • regulation of neurogenesis   • regulation of cell development   • regulation of nervous system development   • positive regulation of developmental process   • multicellular organism development   • neurogenesis   • positive regulation of cell differentiation   • cell differentiation   • anatomical structure development   • positive regulation of neurogenesis   • regulation of multicellular organismal process   • system development   • developmental process   • regulation of multicellular organismal development   • positive regulation of cell development   • nervous system development   • positive regulation of multicellular organismal process   • sensory perception of pain   • negative regulation of protein transport   • establishment of protein localization   • nitrogen compound transport   • regulation of protein localization   • negative regulation of signaling   • negative regulation of Wnt protein secretion   • negative regulation of transport   • negative regulation of cell communication   • protein localization to extracellular region   • secretion by cell   • regulation of secretion by cell   • negative regulation of secretion   • signal release   • negative regulation of secretion by cell   • intracellular protein localization   • regulation of Wnt protein secretion   • negative regulation of protein localization   • secretion   • establishment of protein localization to extracellular region   • regulation of establishment of protein localization   • export from cell   • negative regulation of establishment of protein localization   • regulation of protein transport   • Wnt protein secretion   • protein secretion   • regulation of protein secretion   • regulation of secretion   • negative regulation of protein secretion   • protein transport   • macromolecule localization   • G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger   • somatodendritic compartment   • cell body   • cellular anatomical structure   • perikaryon   • neuronal cell body   • cell periphery   • plasma membrane   • membrane   • cell projection   • dendrite   • dendritic tree   • neuron projection   • plasma membrane bounded cell projection   • membrane-bounded organelle
Gene OntologyCellular Component• somatodendritic compartment   • cell body   • cellular anatomical structure   • perikaryon   • neuronal cell body   • cell periphery   • plasma membrane   • membrane   • cell projection   • dendrite   • dendritic tree   • neuron projection   • plasma membrane bounded cell projection   • membrane-bounded organelle   • intracellular organelle   • intracellular anatomical structure   • Golgi apparatus   • organelle   • cytoplasm   • intracellular membrane-bounded organelle   • endomembrane system   • endosome   • intracellular vesicle   • cytoplasmic vesicle   • vesicle   • synapse   • cell junction   • axon   • endoplasmic reticulum   • D2 dopamine receptor binding   • protein binding   • binding   • signaling receptor binding   • G protein-coupled receptor binding   • dopamine receptor binding   • enzyme regulator activity   • adenylate cyclase inhibitor activity   • cyclase regulator activity   • molecular function inhibitor activity   • cyclase inhibitor activity   • molecular function regulator activity   • enzyme inhibitor activity   • adenylate cyclase regulator activity   • guanyl nucleotide binding   • GTP binding   • nucleotide binding   • guanyl ribonucleotide binding   • purine ribonucleotide binding   • purine ribonucleoside triphosphate binding   • nucleoside phosphate binding   • ion binding   • purine nucleotide binding   • anion binding   • heterocyclic compound binding   • carbohydrate derivative binding   • ribonucleotide binding   • small molecule binding   • cation binding   • magnesium ion binding   • metal ion binding   • GDP binding   • G protein-coupled serotonin receptor binding   • protein-containing complex binding   • G-protein beta/gamma-subunit complex binding   • pyrophosphatase activity   • GTPase activity   • G protein activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • cell communication   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction   • response to hormone   • response to chemical   • response to endogenous stimulus   • response to peptide hormone   • response to oxygen-containing compound   • response to nitrogen compound   • cell division   • leukocyte migration   • immune system process   • mononuclear cell migration   • lymphocyte migration   • cell migration   • T cell migration   • cell motility   • regulation of steroid biosynthetic process   • regulation of cholesterol biosynthetic process   • regulation of cholesterol metabolic process   • steroid metabolic process   • regulation of lipid metabolic process   • sterol metabolic process   • positive regulation of biological process   • cholesterol metabolic process   • lipid biosynthetic process   • alcohol metabolic process   • regulation of primary metabolic process   • positive regulation of metabolic process   • regulation of small molecule metabolic process   • positive regulation of biosynthetic process   • positive regulation of lipid metabolic process   • small molecule metabolic process   • steroid biosynthetic process   • positive regulation of cellular process   • regulation of biosynthetic process   • secondary alcohol biosynthetic process   • regulation of alcohol biosynthetic process   • small molecule biosynthetic process   • regulation of steroid metabolic process   • cholesterol biosynthetic process   • positive regulation of cholesterol biosynthetic process   • primary metabolic process   • secondary alcohol metabolic process   • positive regulation of steroid biosynthetic process   • biosynthetic process   • sterol biosynthetic process   • positive regulation of lipid biosynthetic process   • regulation of sterol biosynthetic process   • alcohol biosynthetic process   • positive regulation of cholesterol metabolic process   • positive regulation of steroid metabolic process   • metabolic process   • regulation of lipid biosynthetic process   • positive regulation of small molecule metabolic process   • regulation of metabolic process   • positive regulation of alcohol biosynthetic process   • positive regulation of sterol biosynthetic process   • lipid metabolic process   • negative regulation of protein transport   • regulation of localization   • establishment of protein localization   • nitrogen compound transport   • negative regulation of biological process   • negative regulation of transport   • localization   • negative regulation of secretion   • negative regulation of hormone secretion   • negative regulation of secretion by cell   • intracellular protein localization   • regulation of biological quality   • regulation of peptide hormone secretion   • negative regulation of peptide hormone secretion   • regulation of hormone levels   • establishment of protein localization to extracellular region   • negative regulation of establishment of protein localization   • protein secretion   • establishment of localization   • regulation of protein secretion   • regulation of secretion   • negative regulation of protein secretion   • regulation of hormone secretion   • regulation of protein localization   • regulation of peptide secretion   • transport   • negative regulation of signaling   • hormone secretion   • negative regulation of cell communication   • protein localization to extracellular region   • negative regulation of peptide secretion   • peptide secretion   • regulation of secretion by cell   • secretion by cell   • amide transport   • signal release   • negative regulation of cellular process   • negative regulation of protein localization   • regulation of signaling   • regulation of transport   • secretion   • regulation of peptide transport   • regulation of establishment of protein localization   • export from cell   • cell-cell signaling   • regulation of protein transport   • peptide transport   • negative regulation of insulin secretion   • protein transport   • regulation of insulin secretion   • peptide hormone secretion   • macromolecule localization   • hormone transport   • regulation of cell communication   • insulin secretion   • regulation of cytoskeleton organization   • regulation of cellular component organization   • microtubule cytoskeleton organization   • regulation of mitotic spindle organization   • mitotic cell cycle   • cellular component organization   • cell cycle   • cellular component organization or biogenesis   • regulation of cell cycle   • microtubule cytoskeleton organization involved in mitosis   • spindle organization   • cell cycle process   • regulation of cell cycle process   • regulation of microtubule-based process   • regulation of spindle organization   • regulation of organelle organization   • mitotic spindle organization   • organelle organization   • mitotic cell cycle process   • microtubule-based process   • cytoskeleton organization   • regulation of microtubule cytoskeleton organization   • positive regulation of protein localization to cell periphery   • protein localization to cell periphery   • positive regulation of protein localization to cell cortex   • regulation of protein localization to cell periphery   • regulation of protein localization to cell cortex   • positive regulation of protein localization   • protein localization to cell cortex   • response to ketone   • response to prostaglandin   • response to lipid   • response to alcohol   • response to prostaglandin E   • cellular response to forskolin   • cellular response to oxygen-containing compound   • cellular response to chemical stimulus   • cellular response to alcohol   • response to forskolin   • cellular response to lipid   • cellular response to ketone   • midbody   • nucleus   • membrane-enclosed lumen   • intracellular membraneless organelle   • nucleolus   • intracellular organelle lumen   • organelle lumen   • membraneless organelle   • nuclear lumen   • cell cortex   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cytoplasmic side of plasma membrane   • GTPase complex   • extrinsic component of membrane   • extrinsic component of cytoplasmic side of plasma membrane   • extracellular exosome   • extracellular vesicle   • extracellular organelle   • extracellular region   • extracellular space   • extracellular membrane-bounded organelle   • centrosome   • microtubule organizing center   • cytoskeleton   • microtubule cytoskeleton   • centriolar satellite   • cytosol   • nucleoplasm   • vacuolar membrane   • lytic vacuole   • vacuole   • lytic vacuole membrane   • bounding membrane of organelle   • lysosomal membrane   • organelle membrane   • lysosome   • cilium   • ciliary basal body   • cytoskeletal protein binding   • spectrin binding   • enzyme binding   • GTPase binding   • phosphoric ester hydrolase activity   • alkylglycerophosphoethanolamine phosphodiesterase activity   • hydrolase activity, acting on ester bonds   • phosphoric diester hydrolase activity   • signaling receptor complex adaptor activity   • protein-macromolecule adaptor activity   • molecular adaptor activity   • signaling adaptor activity   • positive regulation of cytosolic calcium ion concentration   • multicellular organismal process   • system process   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of taste   • developmental process   • sensory organ development   • eye development   • animal organ development   • retina development in camera-type eye   • visual system development   • multicellular organism development   • camera-type eye development   • anatomical structure development   • sensory system development   • system development   • response to decreased oxygen levels   • cellular response to oxygen levels   • cellular response to hypoxia   • cellular response to decreased oxygen levels   • cellular response to stress   • response to hypoxia   • response to stress   • response to oxygen levels   • response to abiotic stimulus   • cell population proliferation   • phospholipase C-activating G protein-coupled receptor signaling pathway   • muscle cell apoptotic process   • striated muscle cell apoptotic process   • apoptotic process   • cell death   • programmed cell death   • cardiac muscle cell apoptotic process   • photoreceptor inner segment   • non-motile cilium   • 9+0 non-motile cilium   • photoreceptor outer segment   • photoreceptor cell cilium   • ciliary membrane   • photoreceptor outer segment membrane   • plasma membrane region   • cell projection membrane   • G-protein beta-subunit binding   • fibroblast proliferation   • cellular response to nitrogen compound   • response to dopamine   • cellular response to dopamine   • response to monoamine   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • G protein-coupled dopamine receptor signaling pathway   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cellular response to monoamine stimulus   • cellular response to prostaglandin stimulus   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to hormone stimulus
SCOP2Domain Identifier• Ras-like P-loop GTPases   • Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• Ras-like P-loop GTPases   • Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeWH9
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodeWH9
Name5,6-dichloro-1-{1-[(4-chlorophenyl)methyl]piperidin-4-yl}-1,3-dihydro-2H-benzimidazol-2-one
Synonyms
Identifier
FormulaC19 H18 Cl3 N3 O
Molecular Weight410.725
SMILES
PubChem130431397
Formal Charge0
Total Atoms44
Total Chiral Atoms0
Total Bonds47
Total Aromatic Bonds12

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP35372
Sequence
>8EFL_nogp_Chain_R
SMITAITIM ALYSIVCVV GLFGNFLVM YVIVRYTKM KTATNIYIF 
NLALADALA TSTLPFQSV NYLMGTWPF GTILCKIVI SIDYYNMFT 
SIFTLCTMS VDRYIAVCH PVKALDFRT PRNAKIINV CNWILSSAI 
GLPVMFMAT TKYRQGSID CTLTFSHPT WYWENLLKI CVFIFAFIM 
PVLIITVCY GLMILRLKS VRMLSGSKE KDRNLRRIT RMVLVVVAV 
FIVCWTPIH IYVIIKALV TIPETTFQT VSWHFCIAL GYTNSCLNP 
VLYAFLDEN FKRCFREF


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
9BJKAPeptideOpioidμMus musculusNaloxoneNAM-3.262024-07-17doi.org/10.1038/s41586-024-07587-7
8K9LAPeptideOpioidμHomo sapiensDamgoBMS-986122Gi3/β1/γ13.052024-05-29doi.org/10.1038/s41467-024-47792-6
8K9L (No Gprot) APeptideOpioidμHomo sapiensDamgoBMS-9861223.052024-05-29doi.org/10.1038/s41467-024-47792-6
7SBFAPeptideOpioidμMus musculusPZM21-Gi1/β1/γ22.92022-04-20doi.org/10.1002/anie.202200269
7SBF (No Gprot) APeptideOpioidμMus musculusPZM21-2.92022-04-20doi.org/10.1002/anie.202200269
7SCGAPeptideOpioidμMus musculusFH210-Gi1/β1/γ232022-04-20doi.org/10.1002/anie.202200269
7SCG (No Gprot) APeptideOpioidμMus musculusFH210-32022-04-20doi.org/10.1002/anie.202200269
8EF5APeptideOpioidμHomo sapiensFentanyl-Gi1/β1/γ23.32022-11-09doi.org/10.1016/j.cell.2022.09.041
8EF5 (No Gprot) APeptideOpioidμHomo sapiensFentanyl-3.32022-11-09doi.org/10.1016/j.cell.2022.09.041
8EF6APeptideOpioidμHomo sapiensMorphine-Gi1/β1/γ23.22022-11-09doi.org/10.1016/j.cell.2022.09.041
8EF6 (No Gprot) APeptideOpioidμHomo sapiensMorphine-3.22022-11-09doi.org/10.1016/j.cell.2022.09.041
8EFBAPeptideOpioidμHomo sapiensOliceridine-Gi1/β1/γ23.22022-11-09doi.org/10.1016/j.cell.2022.09.041
8EFB (No Gprot) APeptideOpioidμHomo sapiensOliceridine-3.22022-11-09doi.org/10.1016/j.cell.2022.09.041
8EFLAPeptideOpioidμHomo sapiensSR17018-Gi1/β1/γ23.22022-11-09doi.org/10.1016/j.cell.2022.09.041
8EFL (No Gprot) APeptideOpioidμHomo sapiensSR17018-3.22022-11-09doi.org/10.1016/j.cell.2022.09.041
8EFOAPeptideOpioidμHomo sapiensPZM21-Gi1/β1/γ22.82022-11-09doi.org/10.1016/j.cell.2022.09.041
8EFO (No Gprot) APeptideOpioidμHomo sapiensPZM21-2.82022-11-09doi.org/10.1016/j.cell.2022.09.041
8EFQAPeptideOpioidμHomo sapiensDamgo-Gi1/β1/γ23.32022-11-09doi.org/10.1016/j.cell.2022.09.041
8EFQ (No Gprot) APeptideOpioidμHomo sapiensDamgo-3.32022-11-09doi.org/10.1016/j.cell.2022.09.041
8F7QAPeptideOpioidμHomo sapiensβ-Endorphin-Gi1/β1/γ23.222022-12-14doi.org/10.1016/j.cell.2022.12.026
8F7Q (No Gprot) APeptideOpioidμHomo sapiensβ-Endorphin-3.222022-12-14doi.org/10.1016/j.cell.2022.12.026
8F7RAPeptideOpioidμHomo sapiensEndomorphin-Gi1/β1/γ23.282022-12-14doi.org/10.1016/j.cell.2022.12.026
8F7R (No Gprot) APeptideOpioidμHomo sapiensEndomorphin-3.282022-12-14doi.org/10.1016/j.cell.2022.12.026
9BQJAPeptideOpioidμMus musculusRO76-Gi1/β1/γ23.32024-09-11doi.org/10.1021/acscentsci.4c00525
9BQJ (No Gprot) APeptideOpioidμMus musculusRO76-3.32024-09-11doi.org/10.1021/acscentsci.4c00525
4DKLAPeptideOpioidμMus musculusβ-Funaltrexamine--2.82012-03-21doi.org/10.1038/nature10954
5C1MAPeptideOpioidμMus musculusBU72--2.072015-08-05doi.org/10.1038/nature14886
8K9KAPeptideOpioidμHomo sapiensDamgo-Gi3/β1/γ12.982024-05-29doi.org/10.1038/s41467-024-47792-6
8K9K (No Gprot) APeptideOpioidμHomo sapiensDamgo-2.982024-05-29doi.org/10.1038/s41467-024-47792-6
6DDEAPeptideOpioidμMus musculusDamgo-Gi1/β1/γ23.52018-06-13doi.org/10.1038/s41586-018-0219-7
6DDE (No Gprot) APeptideOpioidμMus musculusDamgo-3.52018-06-13doi.org/10.1038/s41586-018-0219-7
6DDFAPeptideOpioidμMus musculusDamgo-Gi1/β1/γ23.52018-06-13doi.org/10.1038/s41586-018-0219-7
6DDF (No Gprot) APeptideOpioidμMus musculusDamgo-3.52018-06-13doi.org/10.1038/s41586-018-0219-7
7U2LAPeptideOpioidμMus musculusPubChem 163201242-Gi1/β1/γ23.22022-05-04doi.org/10.1038/s41586-022-05588-y
7U2L (No Gprot) APeptideOpioidμMus musculusPubChem 163201242-3.22022-05-04doi.org/10.1038/s41586-022-05588-y
7U2KAPeptideOpioidμMus musculusC6-guano-Gi1/β1/γ23.32022-12-07doi.org/10.1038/s41586-022-05588-y
7U2K (No Gprot) APeptideOpioidμMus musculusC6-guano-3.32022-12-07doi.org/10.1038/s41586-022-05588-y
7T2GAPeptideOpioidμMus musculusMitragynine Pseudoindoxyl-Gi1/β1/γ22.52022-12-07doi.org/10.1038/s41589-022-01208-y
7T2G (No Gprot) APeptideOpioidμMus musculusMitragynine Pseudoindoxyl-2.52022-12-07doi.org/10.1038/s41589-022-01208-y
7T2HAPeptideOpioidμMus musculusLofentanil-Gi1/β1/γ22.52022-12-07doi.org/10.1038/s41589-022-01208-y
7T2H (No Gprot) APeptideOpioidμMus musculusLofentanil-2.52022-12-07doi.org/10.1038/s41589-022-01208-y
7UL4APeptideOpioidμMus musculusAlvimopan--2.82022-06-29doi.org/10.1038/s41594-022-00859-8
8QOTAPeptideOpioidμMus musculusNanobody-E--3.22023-12-27doi.org/10.1101/2023.12.06.570395
9MQHAPeptideOpioidμHomo sapiens---3.92025-02-12doi.org/10.1101/2025.01.09.632033
9MQIAPeptideOpioidμHomo sapiensIsoquinuclidine--3.32025-02-12doi.org/10.1101/2025.01.09.632033
9MQJAPeptideOpioidμHomo sapiensIsoquinuclidine--3.232025-02-12doi.org/10.1101/2025.01.09.632033
8E0GAPeptideOpioidμMus musculusBU72--2.12023-10-18doi.org/10.1186/s12915-023-01689-w
8Y73APeptideOpioidμHomo sapiensPeptideMPAM-15Gi1/β1/γ22.842025-08-06To be published
8Y73 (No Gprot) APeptideOpioidμHomo sapiensPeptideMPAM-152.842025-08-06To be published
8Y72APeptideOpioidμHomo sapiensPeptideBMS-986122Gi1/β1/γ22.652025-08-06To be published
8Y72 (No Gprot) APeptideOpioidμHomo sapiensPeptideBMS-9861222.652025-08-06To be published




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 8EFL_nogp.zip



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