Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:Y77 5.27407
2R:R:N88 5.5825429
3R:R:Y108 6.07333607
4R:R:F110 5.005406
5R:R:D116 6.918529
6R:R:L123 7.21407
7R:R:Y130 8.145405
8R:R:W135 8.83429718
9R:R:F137 9.456516
10R:R:F154 7.7925406
11R:R:W194 10.76439
12R:R:F223 5.26667606
13R:R:F243 4.68408
14R:R:I244 3.3475404
15R:R:I250 3.7775448
16R:R:Y254 7.715449
17R:R:W295 7.33667618
18R:R:W320 5.546504
19R:R:H321 7.45404
20R:R:Y328 12.005417
21R:R:N330 8.5925409
22R:R:Y338 5.16409
23R:R:F345 5.882508
24L:L:?1 7.507271110
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:H321 R:R:Y130 16.645315.24YesYes045
2R:R:H321 R:R:Y77 13.22526.53YesYes047
3R:R:I324 R:R:Y77 19.09666.04NoYes057
4R:R:H321 R:R:W320 12.9635.29YesYes044
5R:R:I324 R:R:W320 25.387.05NoYes054
6L:L:?1 R:R:I324 44.39639.75YesNo005
7L:L:?1 R:R:W295 1004.86YesYes108
8R:R:N330 R:R:W295 83.66527.91YesYes098
9R:R:N330 R:R:N334 60.875610.9YesNo099
10R:R:L160 R:R:N334 60.3194.12NoNo089
11R:R:L112 R:R:L160 47.89125.54NoNo098
12R:R:D116 R:R:L112 20.67549.5YesNo099
13R:R:D116 R:R:N88 13.48216.73YesYes299
14R:R:N88 R:R:T120 10.59734.39YesNo095
15R:R:L114 R:R:M92 24.56655.65NoNo077
16R:R:L114 R:R:W194 25.91524.56NoYes079
17R:R:N111 R:R:W194 31.24613.56NoYes099
18R:R:N111 R:R:T159 33.57428.77NoNo098
19R:R:L112 R:R:T159 34.48414.42NoNo098
20R:R:F110 R:R:M92 19.19298.71YesNo067
21R:R:N330 R:R:V290 27.72432.96YesNo097
22R:R:L337 R:R:V290 25.30514.47NoNo087
23R:R:L333 R:R:L337 21.83155.54NoNo068
24R:R:L333 R:R:V336 20.62732.98NoNo066
25R:R:F340 R:R:V336 19.45517.87NoNo066
26R:R:F340 R:R:F349 18.42227.5NoNo066
27R:R:F349 R:R:V94 17.63012.62NoNo067
28R:R:F345 R:R:V94 14.64892.62YesNo087
29R:R:N111 R:R:N190 18.43299.54NoNo097
30R:R:I107 R:R:N190 18.83434.25NoNo057
31R:R:L160 R:R:Y338 30.06324.69NoYes089
32R:R:M163 R:R:Y338 28.10965.99NoYes099
33R:R:M163 R:R:Y108 27.22655.99NoYes097
34R:R:N190 R:R:Y108 18.38479.3NoYes077
35L:L:?1 R:R:C219 36.12725.42YesNo109
36R:R:C219 R:R:W135 26.461110.45NoYes198
37R:R:V145 R:R:W135 13.23596.13NoYes158
38R:R:T122 R:R:V145 12.2034.76NoNo065
39R:R:I148 R:R:T122 10.82214.56NoNo056
40L:L:?1 R:R:Y150 58.0556.01YesNo004
41R:R:V204 R:R:Y150 57.07023.79NoNo054
42R:R:L234 R:R:V204 30.29332.98NoNo065
43R:R:F154 R:R:I200 11.384118.84YesNo065
44R:R:I157 R:R:W295 15.92277.05NoYes078
45R:R:I157 R:R:P246 14.54723.39NoNo078
46R:R:C161 R:R:P246 11.30383.77NoNo078
47R:R:C161 R:R:W158 10.24415.22NoNo075
48R:R:F291 R:R:W295 33.488512.03NoYes098
49R:R:F291 R:R:I250 32.61613.77NoYes098
50R:R:I250 R:R:S164 13.84074.64YesNo489
51R:R:C253 R:R:S164 19.06983.44NoNo089
52R:R:I250 R:R:Y254 19.80843.63YesYes489
53R:R:R167 R:R:Y254 21.82628.23NoYes099
54R:R:M257 R:R:R167 14.69714.96NoNo089
55R:R:C253 R:R:Y168 14.44559.41NoNo088
56R:R:M257 R:R:V171 13.12897.61NoNo088
57R:R:I107 R:R:P183 14.18861.69NoNo051
58R:R:P183 R:R:T182 11.84971.75NoNo017
59R:R:L221 R:R:V204 26.23642.98NoNo045
60R:R:F223 R:R:L221 23.91356.09YesNo064
61R:R:F223 R:R:M207 13.34832.49YesNo065
62R:R:F206 R:R:M207 10.6996.22NoNo045
63R:R:F223 R:R:L234 25.42826.09YesNo066
64R:R:F223 R:R:W230 23.83865.01YesNo061
65R:R:P226 R:R:W230 18.61492.7NoNo041
66R:R:P226 R:R:W228 15.98694.05NoNo041
67R:R:W228 R:R:Y229 10.6995.79NoNo011
68R:R:H299 R:R:W295 28.81076.35NoYes078
69R:R:F239 R:R:H299 11.68386.79NoNo067
70R:R:F243 R:R:H299 16.1854.53YesNo087
71R:R:V284 R:R:Y254 13.458.83NoYes089
72R:R:I258 R:R:V284 11.93534.61NoNo058
73R:R:W320 R:R:Y301 10.46894.82YesNo045
74L:L:?1 R:R:Y328 10.586610.01YesYes107
75R:R:R167 R:R:Y338 17.78536.17NoYes099
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
R:R:L123 R:R:Y77 4.69 0 Yes Yes 7 7 2 2
R:R:I324 R:R:Y77 6.04 0 No Yes 5 7 1 2
R:R:L123 R:R:Y328 16.41 0 Yes Yes 7 7 2 1
R:R:D149 R:R:Q126 7.83 1 No No 5 6 1 1
R:R:Q126 R:R:Y328 12.4 1 No Yes 6 7 1 1
L:L:?1 R:R:Q126 13.64 1 Yes No 0 6 0 1
R:R:C142 R:R:W135 5.22 1 No Yes 9 8 2 2
R:R:C219 R:R:W135 10.45 1 No Yes 9 8 1 2
R:R:C142 R:R:C219 7.28 1 No No 9 9 2 1
R:R:A208 R:R:I146 4.87 0 No No 5 4 2 1
L:L:?1 R:R:I146 6.1 1 Yes No 0 4 0 1
R:R:D149 R:R:Y328 9.2 1 No Yes 5 7 1 1
L:L:?1 R:R:D149 8.12 1 Yes No 0 5 0 1
R:R:V204 R:R:Y150 3.79 0 No No 5 4 2 1
L:L:?1 R:R:Y150 6.01 1 Yes No 0 4 0 1
R:R:M153 R:R:W295 5.82 1 No Yes 7 8 1 1
L:L:?1 R:R:M153 10.87 1 Yes No 0 7 0 1
R:R:I157 R:R:W295 7.05 0 No Yes 7 8 2 1
L:L:?1 R:R:C219 5.42 1 Yes No 0 9 0 1
R:R:F291 R:R:W295 12.03 0 No Yes 9 8 2 1
R:R:H299 R:R:W295 6.35 0 No Yes 7 8 2 1
R:R:N330 R:R:W295 7.91 0 Yes Yes 9 8 2 1
L:L:?1 R:R:W295 4.86 1 Yes Yes 0 8 0 1
R:R:C323 R:R:I298 4.91 0 No No 6 6 2 1
L:L:?1 R:R:I298 4.88 1 Yes No 0 6 0 1
R:R:I324 R:R:W320 7.05 0 No Yes 5 4 1 2
L:L:?1 R:R:I324 9.75 1 Yes No 0 5 0 1
L:L:?1 R:R:Y328 10.01 1 Yes Yes 0 7 0 1
L:L:?1 R:R:G327 2.92 1 Yes No 0 7 0 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 8EFB_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3.38
Number of Linked Nodes 264
Number of Links 278
Number of Hubs 24
Number of Links mediated by Hubs 104
Number of Communities 4
Number of Nodes involved in Communities 21
Number of Links involved in Communities 27
Path Summary
Number Of Nodes in MetaPath 76
Number Of Links MetaPath 75
Number of Shortest Paths 40562
Length Of Smallest Path 3
Average Path Length 12.3768
Length of Longest Path 29
Minimum Path Strength 1.31
Average Path Strength 5.97666
Maximum Path Strength 16.75
Minimum Path Correlation 0.7
Average Path Correlation 0.920259
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 3.84615
Average % Of Corr. Nodes 52.0375
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 32.3721
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function• molecular transducer activity   • G protein-coupled receptor activity   • transmembrane signaling receptor activity   • signaling receptor activity   • calcium channel activity   • monoatomic cation transmembrane transporter activity   • voltage-gated calcium channel activity   • gated channel activity   • monoatomic ion channel activity   • voltage-gated channel activity   • voltage-gated monoatomic ion channel activity   • voltage-gated monoatomic cation channel activity   • monoatomic cation channel activity   • passive transmembrane transporter activity   • calcium ion transmembrane transporter activity   • inorganic molecular entity transmembrane transporter activity   • channel activity   • inorganic cation transmembrane transporter activity   • monoatomic ion transmembrane transporter activity   • transporter activity   • metal ion transmembrane transporter activity   • transmembrane transporter activity   • protein binding   • binding   • G-protein beta-subunit binding   • neuropeptide binding   • peptide binding   • G-protein alpha-subunit binding   • peptide receptor activity   • beta-endorphin receptor activity   • G protein-coupled opioid receptor activity   • G protein-coupled peptide receptor activity   • melanocortin receptor activity   • neuropeptide receptor activity   • morphine receptor activity   • regulation of biosynthetic process   • regulation of nitric oxide biosynthetic process   • regulation of biological process   • regulation of cellular process   • biological regulation   • positive regulation of biological process   • reactive nitrogen species metabolic process   • positive regulation of nitric oxide metabolic process   • nitric oxide metabolic process   • positive regulation of metabolic process   • nitric oxide biosynthetic process   • biosynthetic process   • positive regulation of biosynthetic process   • cellular process
Gene OntologyBiological Process• regulation of biosynthetic process   • regulation of nitric oxide biosynthetic process   • regulation of biological process   • regulation of cellular process   • biological regulation   • positive regulation of biological process   • reactive nitrogen species metabolic process   • positive regulation of nitric oxide metabolic process   • nitric oxide metabolic process   • positive regulation of metabolic process   • nitric oxide biosynthetic process   • biosynthetic process   • positive regulation of biosynthetic process   • cellular process   • metabolic process   • regulation of nitric oxide metabolic process   • positive regulation of nitric oxide biosynthetic process   • regulation of metabolic process   • positive regulation of cellular process   • cellular response to stimulus   • response to stimulus   • signaling   • cell communication   • G protein-coupled receptor signaling pathway   • signal transduction   • neuropeptide signaling pathway   • positive regulation of cytosolic calcium ion concentration   • regulation of biological quality   • cellular response to nitrogen compound   • synaptic signaling   • cellular response to acetylcholine   • response to oxygen-containing compound   • cell-cell signaling   • response to nitrogen compound   • acetylcholine receptor signaling pathway   • postsynaptic signal transduction   • cellular response to oxygen-containing compound   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • cellular response to chemical stimulus   • G protein-coupled acetylcholine receptor signaling pathway   • response to chemical   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • response to acetylcholine   • adenylate cyclase-inhibiting G protein-coupled acetylcholine receptor signaling pathway   • positive regulation of cell communication   • positive regulation of signal transduction   • regulation of signal transduction   • intracellular signal transduction   • positive regulation of response to stimulus   • positive regulation of ERK1 and ERK2 cascade   • regulation of intracellular signal transduction   • intracellular signaling cassette   • regulation of signaling   • positive regulation of MAPK cascade   • positive regulation of intracellular signal transduction   • regulation of MAPK cascade   • regulation of response to stimulus   • MAPK cascade   • regulation of cell communication   • ERK1 and ERK2 cascade   • regulation of ERK1 and ERK2 cascade   • positive regulation of signaling   • regulation of localization   • transport   • regulation of signaling receptor activity   • regulation of transmembrane transporter activity   • regulation of transporter activity   • localization   • regulation of NMDA receptor activity   • regulation of monoatomic ion transmembrane transporter activity   • regulation of transport   • establishment of localization   • transmembrane transport   • regulation of molecular function   • regulation of transmembrane transport   • regulation of neurotransmitter receptor activity   • G protein-coupled opioid receptor signaling pathway   • cAMP-mediated signaling   • positive regulation of cAMP-mediated signaling   • regulation of cAMP-mediated signaling   • regulation of cellular response to stress   • cellular response to stress   • regulation of response to stress   • response to stress   • negative regulation of metabolic process   • negative regulation of biological process   • negative regulation of nitric oxide metabolic process   • negative regulation of nitric oxide biosynthetic process   • negative regulation of biosynthetic process   • negative regulation of cellular process   • multicellular organismal process   • system process   • sensory perception   • nervous system process   • behavior   • adult behavior   • response to alcohol   • behavioral response to ethanol   • response to ethanol   • negative regulation of cell population proliferation   • cell population proliferation   • regulation of cell population proliferation   • phospholipase C-activating G protein-coupled receptor signaling pathway   • negative regulation of cytosolic calcium ion concentration   • positive regulation of nervous system development   • regulation of developmental process   • cellular developmental process   • cell development   • regulation of cell differentiation   • regulation of neurogenesis   • regulation of cell development   • regulation of nervous system development   • positive regulation of developmental process   • multicellular organism development   • neurogenesis   • positive regulation of cell differentiation   • cell differentiation   • anatomical structure development   • positive regulation of neurogenesis   • regulation of multicellular organismal process   • system development   • developmental process   • regulation of multicellular organismal development   • positive regulation of cell development   • nervous system development   • positive regulation of multicellular organismal process   • negative regulation of signaling   • negative regulation of intracellular signal transduction   • negative regulation of cell communication   • negative regulation of response to stimulus   • negative regulation of signal transduction   • negative regulation of cAMP-mediated signaling   • sensory perception of pain   • protein localization   • negative regulation of protein transport   • establishment of protein localization   • nitrogen compound transport   • negative regulation of transport   • negative regulation of secretion   • cellular macromolecule localization   • negative regulation of secretion by cell   • establishment of protein localization to extracellular region   • negative regulation of establishment of protein localization   • protein secretion   • regulation of protein secretion   • regulation of secretion   • negative regulation of protein secretion   • cellular localization   • regulation of protein localization   • negative regulation of Wnt protein secretion   • protein localization to extracellular region   • secretion by cell   • regulation of secretion by cell   • signal release   • regulation of Wnt protein secretion   • negative regulation of protein localization   • secretion   • regulation of establishment of protein localization   • export from cell   • regulation of protein transport   • Wnt protein secretion   • protein transport   • regulation of cellular localization   • macromolecule localization   • G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger   • somatodendritic compartment   • cell body   • cellular anatomical structure   • perikaryon   • neuronal cell body   • cell periphery   • plasma membrane   • membrane   • cell projection   • dendrite   • dendritic tree   • neuron projection   • plasma membrane bounded cell projection   • membrane-bounded organelle
Gene OntologyCellular Component• somatodendritic compartment   • cell body   • cellular anatomical structure   • perikaryon   • neuronal cell body   • cell periphery   • plasma membrane   • membrane   • cell projection   • dendrite   • dendritic tree   • neuron projection   • plasma membrane bounded cell projection   • membrane-bounded organelle   • intracellular organelle   • intracellular anatomical structure   • Golgi apparatus   • organelle   • cytoplasm   • intracellular membrane-bounded organelle   • endomembrane system   • endosome   • intracellular vesicle   • cytoplasmic vesicle   • vesicle   • synapse   • cell junction   • axon   • endoplasmic reticulum   • D2 dopamine receptor binding   • protein binding   • binding   • signaling receptor binding   • G protein-coupled receptor binding   • dopamine receptor binding   • phosphorus-oxygen lyase activity   • enzyme regulator activity   • cyclase regulator activity   • molecular function regulator activity   • cyclase activity   • adenylate cyclase regulator activity   • lyase activity   • catalytic activity   • adenylate cyclase activity   • guanyl nucleotide binding   • GTP binding   • nucleotide binding   • guanyl ribonucleotide binding   • purine ribonucleotide binding   • purine ribonucleoside triphosphate binding   • nucleoside phosphate binding   • ion binding   • purine nucleotide binding   • anion binding   • heterocyclic compound binding   • carbohydrate derivative binding   • ribonucleotide binding   • small molecule binding   • cation binding   • magnesium ion binding   • metal ion binding   • GDP binding   • G protein-coupled serotonin receptor binding   • protein-containing complex binding   • G-protein beta/gamma-subunit complex binding   • pyrophosphatase activity   • GTPase activity   • G protein activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • cell communication   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction   • response to hormone   • response to chemical   • response to endogenous stimulus   • response to peptide hormone   • response to oxygen-containing compound   • response to nitrogen compound   • cell division   • leukocyte migration   • immune system process   • mononuclear cell migration   • lymphocyte migration   • cell migration   • T cell migration   • cell motility   • regulation of steroid biosynthetic process   • regulation of cholesterol biosynthetic process   • regulation of cholesterol metabolic process   • steroid metabolic process   • regulation of lipid metabolic process   • sterol metabolic process   • positive regulation of biological process   • cholesterol metabolic process   • lipid biosynthetic process   • alcohol metabolic process   • regulation of primary metabolic process   • positive regulation of metabolic process   • regulation of small molecule metabolic process   • positive regulation of biosynthetic process   • positive regulation of lipid metabolic process   • small molecule metabolic process   • steroid biosynthetic process   • positive regulation of cellular process   • regulation of biosynthetic process   • secondary alcohol biosynthetic process   • regulation of alcohol biosynthetic process   • small molecule biosynthetic process   • regulation of steroid metabolic process   • cholesterol biosynthetic process   • positive regulation of cholesterol biosynthetic process   • primary metabolic process   • secondary alcohol metabolic process   • positive regulation of steroid biosynthetic process   • biosynthetic process   • sterol biosynthetic process   • positive regulation of lipid biosynthetic process   • regulation of sterol biosynthetic process   • alcohol biosynthetic process   • positive regulation of cholesterol metabolic process   • positive regulation of steroid metabolic process   • metabolic process   • regulation of lipid biosynthetic process   • positive regulation of small molecule metabolic process   • regulation of metabolic process   • positive regulation of alcohol biosynthetic process   • positive regulation of sterol biosynthetic process   • lipid metabolic process   • regulation of cytoskeleton organization   • regulation of cellular component organization   • microtubule cytoskeleton organization   • regulation of mitotic spindle organization   • mitotic cell cycle   • cellular component organization   • cell cycle   • cellular component organization or biogenesis   • regulation of cell cycle   • microtubule cytoskeleton organization involved in mitosis   • spindle organization   • cell cycle process   • regulation of cell cycle process   • regulation of microtubule-based process   • regulation of spindle organization   • regulation of organelle organization   • mitotic spindle organization   • organelle organization   • mitotic cell cycle process   • microtubule-based process   • cytoskeleton organization   • regulation of microtubule cytoskeleton organization   • protein localization   • positive regulation of protein localization to cell periphery   • regulation of localization   • protein localization to cell periphery   • cellular localization   • regulation of protein localization   • positive regulation of protein localization to cell cortex   • regulation of protein localization to cell periphery   • localization   • regulation of cellular localization   • regulation of protein localization to cell cortex   • cellular macromolecule localization   • macromolecule localization   • positive regulation of protein localization   • protein localization to cell cortex   • response to ketone   • response to prostaglandin   • response to lipid   • response to alcohol   • response to prostaglandin E   • cellular response to forskolin   • cellular response to oxygen-containing compound   • cellular response to chemical stimulus   • cellular response to alcohol   • response to forskolin   • cellular response to lipid   • cellular response to ketone   • midbody   • nucleus   • membrane-enclosed lumen   • intracellular membraneless organelle   • nucleolus   • intracellular organelle lumen   • organelle lumen   • membraneless organelle   • nuclear lumen   • cell cortex   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cytoplasmic side of plasma membrane   • GTPase complex   • extrinsic component of membrane   • extrinsic component of cytoplasmic side of plasma membrane   • extracellular exosome   • extracellular vesicle   • extracellular organelle   • extracellular region   • extracellular space   • extracellular membrane-bounded organelle   • centrosome   • microtubule organizing center   • cytoskeleton   • microtubule cytoskeleton   • centriolar satellite   • cytosol   • nucleoplasm   • vacuolar membrane   • lytic vacuole   • vacuole   • lytic vacuole membrane   • bounding membrane of organelle   • lysosomal membrane   • organelle membrane   • lysosome   • cilium   • ciliary basal body   • cytoskeletal protein binding   • spectrin binding   • enzyme binding   • GTPase binding   • phosphoric ester hydrolase activity   • alkylglycerophosphoethanolamine phosphodiesterase activity   • hydrolase activity, acting on ester bonds   • phosphoric diester hydrolase activity   • signaling receptor complex adaptor activity   • protein-macromolecule adaptor activity   • molecular adaptor activity   • signaling adaptor activity   • positive regulation of cytosolic calcium ion concentration   • regulation of biological quality   • multicellular organismal process   • system process   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of taste   • developmental process   • sensory organ development   • eye development   • animal organ development   • retina development in camera-type eye   • visual system development   • multicellular organism development   • camera-type eye development   • anatomical structure development   • sensory system development   • system development   • response to decreased oxygen levels   • cellular response to oxygen levels   • cellular response to hypoxia   • cellular response to decreased oxygen levels   • cellular response to stress   • response to hypoxia   • response to stress   • response to oxygen levels   • response to abiotic stimulus   • cell population proliferation   • phospholipase C-activating G protein-coupled receptor signaling pathway   • muscle cell apoptotic process   • striated muscle cell apoptotic process   • apoptotic process   • cell death   • programmed cell death   • cardiac muscle cell apoptotic process   • photoreceptor inner segment   • non-motile cilium   • 9+0 non-motile cilium   • photoreceptor outer segment   • photoreceptor cell cilium   • ciliary membrane   • photoreceptor outer segment membrane   • plasma membrane region   • cell projection membrane   • G-protein beta-subunit binding   • cellular response to nitrogen compound   • response to dopamine   • cellular response to dopamine   • response to monoamine   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • G protein-coupled dopamine receptor signaling pathway   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cellular response to monoamine stimulus   • cellular response to prostaglandin stimulus   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to hormone stimulus
SCOP2Domain Identifier• Ras-like P-loop GTPases   • Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• Ras-like P-loop GTPases   • Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeWH2
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodeWH2
NameOliceridine
SynonymsOliceridine
Identifier
FormulaC22 H30 N2 O2 S
Molecular Weight386.551
SMILES
PubChem66553195
Formal Charge0
Total Atoms57
Total Chiral Atoms1
Total Bonds60
Total Aromatic Bonds11

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP35372
Sequence
>8EFB_nogp_Chain_R
TAITIMALY SIVCVVGLF GNFLVMYVI VRYTKMKTA TNIYIFNLA 
LADALATST LPFQSVNYL MGTWPFGTI LCKIVISID YYNMFTSIW 
TLCTMSVDR YIAVCHPVK ALDFRTPRN AKIINVCNW ILSSAIGLP 
VMFMATTKY RQGSIDCTL TFSHPTWYW ENLLKICVF IFAFIMPVL 
IITVCYGLM ILRLKSVRM LSGSKEKDR NLRRITRMV LVVVAVFIV 
CWTPIHIYV IIKALVTIP ETTFQTVSW HFCIALGYT NSCLNPVLY 
AFLDENFKR CFREF


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
9MQJAPeptideOpioidμHomo sapiensIsoquinuclidine--3.232025-02-1210.1101/2025.01.09.632033
9MQIAPeptideOpioidμHomo sapiensIsoquinuclidine--3.32025-02-1210.1101/2025.01.09.632033
9MQHAPeptideOpioidμHomo sapiens---3.92025-02-1210.1101/2025.01.09.632033
9BQJAPeptideOpioidμMus musculusRO76-Gi1/β1/γ23.32024-09-1110.1021/acscentsci.4c00525
9BQJ (No Gprot) APeptideOpioidμMus musculusRO76-3.32024-09-1110.1021/acscentsci.4c00525
9BJKAPeptideOpioidμMus musculusNaloxoneNAM-3.262024-07-1710.1038/s41586-024-07587-7
8K9LAPeptideOpioidμHomo sapiensDamgoVV9Gi3/β1/γ13.052024-05-2910.1038/s41467-024-47792-6
8K9L (No Gprot) APeptideOpioidμHomo sapiensDamgoVV93.052024-05-2910.1038/s41467-024-47792-6
8K9KAPeptideOpioidμHomo sapiensDamgo-Gi3/β1/γ12.982024-05-2910.1038/s41467-024-47792-6
8K9K (No Gprot) APeptideOpioidμHomo sapiensDamgo-2.982024-05-2910.1038/s41467-024-47792-6
8QOTAPeptideOpioidμMus musculusNanobody-E--3.22023-12-2710.1101/2023.12.06.570395
8E0GAPeptideOpioidμMus musculusBU72--2.12023-10-1810.1186/s12915-023-01689-w
8F7RAPeptideOpioidμHomo sapiensEndomorphin-Gi1/β1/γ23.282022-12-1410.1016/j.cell.2022.12.026
8F7R (No Gprot) APeptideOpioidμHomo sapiensEndomorphin-3.282022-12-1410.1016/j.cell.2022.12.026
8F7QAPeptideOpioidμHomo sapiensβ-Endorphin-Gi1/β1/γ23.222022-12-1410.1016/j.cell.2022.12.026
8F7Q (No Gprot) APeptideOpioidμHomo sapiensβ-Endorphin-3.222022-12-1410.1016/j.cell.2022.12.026
7T2HAPeptideOpioidμMus musculusLofentanil-Gi1/β1/γ22.52022-12-0710.1038/s41589-022-01208-y
7T2H (No Gprot) APeptideOpioidμMus musculusLofentanil-2.52022-12-0710.1038/s41589-022-01208-y
7T2GAPeptideOpioidμMus musculusMitragynine Pseudoindoxyl-Gi1/β1/γ22.52022-12-0710.1038/s41589-022-01208-y
7T2G (No Gprot) APeptideOpioidμMus musculusMitragynine Pseudoindoxyl-2.52022-12-0710.1038/s41589-022-01208-y
7U2KAPeptideOpioidμMus musculusC6-guano-Gi1/β1/γ23.32022-12-0710.1038/s41586-022-05588-y
7U2K (No Gprot) APeptideOpioidμMus musculusC6-guano-3.32022-12-0710.1038/s41586-022-05588-y
8EFQAPeptideOpioidμHomo sapiensDamgo-Gi1/β1/γ23.32022-11-0910.1016/j.cell.2022.09.041
8EFQ (No Gprot) APeptideOpioidμHomo sapiensDamgo-3.32022-11-0910.1016/j.cell.2022.09.041
8EFOAPeptideOpioidμHomo sapiensPZM21-Gi1/β1/γ22.82022-11-0910.1016/j.cell.2022.09.041
8EFO (No Gprot) APeptideOpioidμHomo sapiensPZM21-2.82022-11-0910.1016/j.cell.2022.09.041
8EFLAPeptideOpioidμHomo sapiensSR17018-Gi1/β1/γ23.22022-11-0910.1016/j.cell.2022.09.041
8EFL (No Gprot) APeptideOpioidμHomo sapiensSR17018-3.22022-11-0910.1016/j.cell.2022.09.041
8EFBAPeptideOpioidμHomo sapiensOliceridine-Gi1/β1/γ23.22022-11-0910.1016/j.cell.2022.09.041
8EFB (No Gprot) APeptideOpioidμHomo sapiensOliceridine-3.22022-11-0910.1016/j.cell.2022.09.041
8EF6APeptideOpioidμHomo sapiensMorphine-Gi1/β1/γ23.22022-11-0910.1016/j.cell.2022.09.041
8EF6 (No Gprot) APeptideOpioidμHomo sapiensMorphine-3.22022-11-0910.1016/j.cell.2022.09.041
8EF5APeptideOpioidμHomo sapiensFentanyl-Gi1/β1/γ23.32022-11-0910.1016/j.cell.2022.09.041
8EF5 (No Gprot) APeptideOpioidμHomo sapiensFentanyl-3.32022-11-0910.1016/j.cell.2022.09.041
7UL4APeptideOpioidμMus musculusAlvimopan--2.82022-06-2910.1038/s41594-022-00859-8
7U2LAPeptideOpioidμMus musculusPubChem 163201242-Gi1/β1/γ23.22022-05-0410.1038/s41586-022-05588-y
7U2L (No Gprot) APeptideOpioidμMus musculusPubChem 163201242-3.22022-05-0410.1038/s41586-022-05588-y
7SCGAPeptideOpioidμMus musculusFH210-Gi1/β1/γ232022-04-2010.1002/anie.202200269
7SCG (No Gprot) APeptideOpioidμMus musculusFH210-32022-04-2010.1002/anie.202200269
7SBFAPeptideOpioidμMus musculusPZM21-Gi1/β1/γ22.92022-04-2010.1002/anie.202200269
7SBF (No Gprot) APeptideOpioidμMus musculusPZM21-2.92022-04-2010.1002/anie.202200269
6DDFAPeptideOpioidμMus musculusDamgo-Gi1/β1/γ23.52018-06-1310.1038/s41586-018-0219-7
6DDF (No Gprot) APeptideOpioidμMus musculusDamgo-3.52018-06-1310.1038/s41586-018-0219-7
6DDEAPeptideOpioidμMus musculusDamgo-Gi1/β1/γ23.52018-06-1310.1038/s41586-018-0219-7
6DDE (No Gprot) APeptideOpioidμMus musculusDamgo-3.52018-06-1310.1038/s41586-018-0219-7
5C1MAPeptideOpioidμMus musculusBU72--2.072015-08-0510.1038/nature14886
4DKLAPeptideOpioidμMus musculusβ-Funaltrexamine--2.82012-03-2110.1038/nature10954




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Download 8EFB_nogp.zip



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