Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:Y77 7.54407
2R:R:V91 3.985409
3R:R:Y108 6.524507
4R:R:F110 5.96406
5R:R:D116 7.015409
6R:R:L123 4.865407
7R:R:F125 6.6426
8R:R:W135 9.38429728
9R:R:F137 9.622526
10R:R:C142 5.115429
11R:R:D149 7.0825465
12R:R:Y151 5.47535
13R:R:N152 5.07408
14R:R:F154 6.736506
15R:R:T155 7.95437
16R:R:Y168 6.8575408
17R:R:W194 7.7525439
18R:R:F223 3.94667606
19R:R:W230 3.7625401
20R:R:F239 6.5225416
21R:R:F243 6.204518
22R:R:Y254 7.186519
23R:R:F291 5.475419
24R:R:W295 7.515618
25R:R:Q316 4.3975403
26R:R:W320 6.606504
27R:R:H321 9.5075444
28R:R:N330 7.42419
29R:R:N334 6.205419
30R:R:Y338 4.988519
31R:R:F340 3.95406
32R:R:F345 6.638558
33L:L:?1 8.31857700
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:H321 R:R:W320 15.08626.35YesYes044
2R:R:C81 R:R:L123 12.50374.76NoYes067
3R:R:N88 R:R:P335 23.64514.89NoNo099
4R:R:D116 R:R:N88 26.40536.73YesNo099
5R:R:D116 R:R:N334 30.45678.08YesYes099
6R:R:N330 R:R:N334 90.57636.81YesYes199
7R:R:N330 R:R:W295 70.905610.17YesYes198
8R:R:M153 R:R:W295 1005.82NoYes078
9L:L:?1 R:R:M153 97.944710.19YesNo007
10L:L:?1 R:R:W320 32.73114.56YesYes004
11R:R:F340 R:R:V91 16.53733.93YesYes069
12R:R:P335 R:R:V91 20.83753.53NoYes099
13R:R:F110 R:R:M92 17.98267.46YesNo067
14R:R:L114 R:R:M92 19.4165.65NoNo077
15R:R:L114 R:R:W194 21.76753.42NoYes079
16R:R:N111 R:R:W194 40.73923.39NoYes099
17R:R:N111 R:R:N190 41.97129.54NoNo097
18R:R:N190 R:R:Y108 47.953610.47NoYes077
19R:R:M163 R:R:Y108 63.99933.59NoYes097
20R:R:M163 R:R:Y338 64.87594.79NoYes099
21R:R:N334 R:R:Y338 73.70735.81YesYes199
22R:R:F340 R:R:F349 10.6324.29YesNo066
23R:R:F110 R:R:I95 13.61137.54YesNo067
24R:R:F345 R:R:I95 12.11875.02YesNo087
25R:R:D166 R:R:Y108 15.06846.9NoYes087
26R:R:W194 R:R:Y151 14.56499.65YesYes395
27R:R:D149 R:R:T122 42.07784.34YesNo056
28L:L:?1 R:R:D149 55.090910.87YesYes005
29R:R:T122 R:R:V145 40.86954.76NoNo065
30R:R:L123 R:R:Y328 15.7917.03YesNo077
31R:R:V145 R:R:W135 30.21384.9NoYes258
32R:R:C142 R:R:W135 14.44656.53YesYes298
33L:L:?1 R:R:Y150 44.968315.02YesNo004
34R:R:L221 R:R:Y150 42.74713.52NoNo044
35R:R:F291 R:R:W295 27.09837.02YesYes198
36R:R:F291 R:R:I250 45.95156.28YesNo198
37R:R:I250 R:R:S164 14.65384.64NoNo189
38R:R:C253 R:R:S164 15.63113.44NoNo089
39R:R:I250 R:R:Y254 30.19013.63NoYes189
40R:R:R167 R:R:Y254 24.46258.23NoYes099
41R:R:M257 R:R:R167 23.22454.96NoNo089
42R:R:C253 R:R:Y168 12.59856.72NoYes088
43R:R:M257 R:R:V171 21.83857.61NoNo088
44R:R:L261 R:R:V171 20.43484.47NoNo088
45R:R:F223 R:R:L221 34.13493.65YesNo064
46R:R:F223 R:R:W230 19.47523.01YesYes061
47R:R:H299 R:R:W295 26.26318.46NoYes178
48R:R:F243 R:R:H299 18.02410.18YesNo187
49R:R:L233 R:R:W230 10.73272.28NoYes031
50R:R:F243 R:R:T296 12.50377.78YesNo085
51R:R:I280 R:R:L261 10.35951.43NoNo088
52R:R:V287 R:R:Y338 10.77423.79NoYes089
53R:R:W320 R:R:Y301 12.43265.79YesNo045
54R:R:D149 R:R:Y328 16.9469.2YesNo657
55R:R:F291 R:R:N330 20.81384.83YesYes199
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
R:R:D149 R:R:T122 4.34 6 Yes No 5 6 1 2
R:R:D149 R:R:Q126 3.92 6 Yes No 5 6 1 2
R:R:Q126 R:R:Y328 5.64 6 No No 6 7 2 2
R:R:D149 R:R:Y328 9.2 6 Yes No 5 7 1 2
L:L:?1 R:R:D149 10.87 0 Yes Yes 0 5 0 1
R:R:V204 R:R:Y150 6.31 0 No No 5 4 2 1
R:R:L221 R:R:Y150 3.52 0 No No 4 4 2 1
L:L:?1 R:R:Y150 15.02 0 Yes No 0 4 0 1
R:R:F154 R:R:M153 3.73 0 Yes No 6 7 2 1
R:R:M153 R:R:W295 5.82 0 No Yes 7 8 1 2
L:L:?1 R:R:M153 10.19 0 Yes No 0 7 0 1
R:R:F154 R:R:V238 7.87 0 Yes No 6 5 2 1
L:L:?1 R:R:V238 4.77 0 Yes No 0 5 0 1
L:L:?1 R:R:I298 6.86 0 Yes No 0 6 0 1
R:R:W320 R:R:Y301 5.79 0 Yes No 4 5 1 2
L:L:?1 R:R:V302 5.96 0 Yes No 0 5 0 1
R:R:K305 R:R:W320 9.28 0 No Yes 3 4 2 1
R:R:H321 R:R:W320 6.35 4 Yes Yes 4 4 2 1
R:R:I324 R:R:W320 7.05 0 No Yes 5 4 2 1
L:L:?1 R:R:W320 4.56 0 Yes Yes 0 4 0 1
R:R:C323 R:R:I298 3.27 0 No No 6 6 2 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 8EF6_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3.39
Number of Linked Nodes 267
Number of Links 279
Number of Hubs 33
Number of Links mediated by Hubs 129
Number of Communities 6
Number of Nodes involved in Communities 35
Number of Links involved in Communities 45
Path Summary
Number Of Nodes in MetaPath 56
Number Of Links MetaPath 55
Number of Shortest Paths 34361
Length Of Smallest Path 3
Average Path Length 12.8779
Length of Longest Path 30
Minimum Path Strength 1.43
Average Path Strength 6.19716
Maximum Path Strength 20.465
Minimum Path Correlation 0.7
Average Path Correlation 0.920653
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 4.34783
Average % Of Corr. Nodes 51.7928
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 43.6396
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain   • Ras-like P-loop GTPases
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain   • Ras-like P-loop GTPases
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeMOI
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodeMOI
NameMorphine
SynonymsMorphine
Identifier
FormulaC17 H19 N O3
Molecular Weight285.338
SMILES
PubChem5288826
Formal Charge0
Total Atoms40
Total Chiral Atoms5
Total Bonds44
Total Aromatic Bonds6

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP35372
Sequence
>8EF6_nogp_Chain_R
SMITAITIM ALYSIVCVV GLFGNFLVM YVIVRYTKM KTATNIYIF 
NLALADALA TSTLPFQSV NYLMGTWPF GTILCKIVI SIDYYNMFT 
SIFTLCTMS VDRYIAVCH PVKALDFRT PRNAKIINV CNWILSSAI 
GLPVMFMAT TKYRQGSID CTLTFSHPT WYWENLLKI CVFIFAFIM 
PVLIITVCY GLMILRLKS VRMLSGSKE KDRNLRRIT RMVLVVVAV 
FIVCWTPIH IYVIIKALV TIPETTFQT VSWHFCIAL GYTNSCLNP 
VLYAFLDEN FKRCFREF


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
4DKLAPeptideOpioidμMus musculusβ-Funaltrexamine--2.82012-03-21doi.org/10.1038/nature10954
5C1MAPeptideOpioidμMus musculusBU72--2.072015-08-05doi.org/10.1038/nature14886
6DDEAPeptideOpioidμMus musculusDAMGO-Gi1/β1/γ23.52018-06-13doi.org/10.1038/s41586-018-0219-7
6DDE (No Gprot) APeptideOpioidμMus musculusDAMGO-3.52018-06-13doi.org/10.1038/s41586-018-0219-7
6DDFAPeptideOpioidμMus musculusDAMGO-Gi1/β1/γ23.52018-06-13doi.org/10.1038/s41586-018-0219-7
6DDF (No Gprot) APeptideOpioidμMus musculusDAMGO-3.52018-06-13doi.org/10.1038/s41586-018-0219-7
7SBFAPeptideOpioidμMus musculusPZM21-Gi1/β1/γ22.92022-04-20doi.org/10.1002/anie.202200269
7SBF (No Gprot) APeptideOpioidμMus musculusPZM21-2.92022-04-20doi.org/10.1002/anie.202200269
7SCGAPeptideOpioidμMus musculusFH210-Gi1/β1/γ232022-04-20doi.org/10.1002/anie.202200269
7SCG (No Gprot) APeptideOpioidμMus musculusFH210-32022-04-20doi.org/10.1002/anie.202200269
7U2LAPeptideOpioidμMus musculusC5-guano-Gi1/β1/γ23.22022-05-04doi.org/10.1038/s41586-022-05588-y
7U2L (No Gprot) APeptideOpioidμMus musculusC5-guano-3.22022-05-04doi.org/10.1038/s41586-022-05588-y
7UL4APeptideOpioidμMus musculusAlvimopan--2.82022-06-29doi.org/10.1038/s41594-022-00859-8
8EF5APeptideOpioidμHomo sapiensFentanyl-Gi1/β1/γ23.32022-11-09doi.org/10.1016/j.cell.2022.09.041
8EF5 (No Gprot) APeptideOpioidμHomo sapiensFentanyl-3.32022-11-09doi.org/10.1016/j.cell.2022.09.041
8EF6APeptideOpioidμHomo sapiensMorphine-Gi1/β1/γ23.22022-11-09doi.org/10.1016/j.cell.2022.09.041
8EF6 (No Gprot) APeptideOpioidμHomo sapiensMorphine-3.22022-11-09doi.org/10.1016/j.cell.2022.09.041
8EFBAPeptideOpioidμHomo sapiensOliceridine-Gi1/β1/γ23.22022-11-09doi.org/10.1016/j.cell.2022.09.041
8EFB (No Gprot) APeptideOpioidμHomo sapiensOliceridine-3.22022-11-09doi.org/10.1016/j.cell.2022.09.041
8EFLAPeptideOpioidμHomo sapiensSR17018-Gi1/β1/γ23.22022-11-09doi.org/10.1016/j.cell.2022.09.041
8EFL (No Gprot) APeptideOpioidμHomo sapiensSR17018-3.22022-11-09doi.org/10.1016/j.cell.2022.09.041
8EFOAPeptideOpioidμHomo sapiensPZM21-Gi1/β1/γ22.82022-11-09doi.org/10.1016/j.cell.2022.09.041
8EFO (No Gprot) APeptideOpioidμHomo sapiensPZM21-2.82022-11-09doi.org/10.1016/j.cell.2022.09.041
8EFQAPeptideOpioidμHomo sapiensDAMGO-Gi1/β1/γ23.32022-11-09doi.org/10.1016/j.cell.2022.09.041
8EFQ (No Gprot) APeptideOpioidμHomo sapiensDAMGO-3.32022-11-09doi.org/10.1016/j.cell.2022.09.041
7T2GAPeptideOpioidμMus musculusMitragynine Pseudoindoxyl-Gi1/β1/γ22.52022-12-07doi.org/10.1038/s41589-022-01208-y
7T2G (No Gprot) APeptideOpioidμMus musculusMitragynine Pseudoindoxyl-2.52022-12-07doi.org/10.1038/s41589-022-01208-y
7T2HAPeptideOpioidμMus musculusLofentanil-Gi1/β1/γ22.52022-12-07doi.org/10.1038/s41589-022-01208-y
7T2H (No Gprot) APeptideOpioidμMus musculusLofentanil-2.52022-12-07doi.org/10.1038/s41589-022-01208-y
7U2KAPeptideOpioidμMus musculusC6-guano-Gi1/β1/γ23.32022-12-07doi.org/10.1038/s41586-022-05588-y
7U2K (No Gprot) APeptideOpioidμMus musculusC6-guano-3.32022-12-07doi.org/10.1038/s41586-022-05588-y
8F7QAPeptideOpioidμHomo sapiensβ-Endorphin-Gi1/β1/γ23.222022-12-14doi.org/10.1016/j.cell.2022.12.026
8F7Q (No Gprot) APeptideOpioidμHomo sapiensβ-Endorphin-3.222022-12-14doi.org/10.1016/j.cell.2022.12.026
8F7RAPeptideOpioidμHomo sapiensEndomorphin-Gi1/β1/γ23.282022-12-14doi.org/10.1016/j.cell.2022.12.026
8F7R (No Gprot) APeptideOpioidμHomo sapiensEndomorphin-3.282022-12-14doi.org/10.1016/j.cell.2022.12.026
8K9KAPeptideOpioidμHomo sapiensDAMGO-Gi3/β1/γ12.982024-05-29doi.org/10.1038/s41467-024-47792-6
8K9K (No Gprot) APeptideOpioidμHomo sapiensDAMGO-2.982024-05-29doi.org/10.1038/s41467-024-47792-6
8K9LAPeptideOpioidμHomo sapiensDAMGOBMS-986122Gi3/β1/γ13.052024-05-29doi.org/10.1038/s41467-024-47792-6
8K9L (No Gprot) APeptideOpioidμHomo sapiensDAMGOBMS-9861223.052024-05-29doi.org/10.1038/s41467-024-47792-6
9BJKAPeptideOpioidμMus musculusNaloxonePubChem 171642066-3.262024-07-17doi.org/10.1038/s41586-024-07587-7
9BQJAPeptideOpioidμMus musculusRO76-Gi1/β1/γ23.32024-09-11doi.org/10.1021/acscentsci.4c00525
9BQJ (No Gprot) APeptideOpioidμMus musculusRO76-3.32024-09-11doi.org/10.1021/acscentsci.4c00525
9MQHAPeptideOpioidμHomo sapiens---3.92025-02-12doi.org/10.1101/2025.01.09.632033
9MQIAPeptideOpioidμHomo sapiensIsoquinuclidine--3.32025-02-12doi.org/10.1101/2025.01.09.632033
9MQJAPeptideOpioidμHomo sapiensIsoquinuclidine--3.232025-02-12doi.org/10.1101/2025.01.09.632033
9WSTAPeptideOpioidμHomo sapiensDAMGO-chim(NtGi1-Gz)/β1/γ22.82025-11-2610.1038/s41422-025-01191-8
9WST (No Gprot) APeptideOpioidμHomo sapiensDAMGO-2.82025-11-2610.1038/s41422-025-01191-8
9WSVAPeptideOpioidμHomo sapiensDAMGO-Arrestin22.82025-11-2610.1038/s41422-025-01191-8
9WSV (No Gprot) APeptideOpioidμHomo sapiensDAMGO-2.82025-11-2610.1038/s41422-025-01191-8
9WSWAPeptideOpioidμHomo sapiensEndomorphin-chim(NtGi1-Gz)/β1/γ22.82025-11-2610.1038/s41422-025-01191-8
9WSW (No Gprot) APeptideOpioidμHomo sapiensEndomorphin-2.82025-11-2610.1038/s41422-025-01191-8
9WSXAPeptideOpioidμHomo sapiensEndomorphin-Arrestin22.82025-11-2610.1038/s41422-025-01191-8
9WSX (No Gprot) APeptideOpioidμHomo sapiensEndomorphin-2.82025-11-2610.1038/s41422-025-01191-8
8E0GAPeptideOpioidμMus musculusBU72--2.12023-10-18doi.org/10.1186/s12915-023-01689-w
8QOTAPeptideOpioidμMus musculusNanobody-E--3.22023-12-27doi.org/10.1101/2023.12.06.570395
8Y72APeptideOpioidμHomo sapiensPeptideBMS-986122Gi1/β1/γ22.652025-08-06To be published
8Y72 (No Gprot) APeptideOpioidμHomo sapiensPeptideBMS-9861222.652025-08-06To be published
8Y73APeptideOpioidμHomo sapiensPeptideMPAM-15Gi1/β1/γ22.842025-08-06To be published
8Y73 (No Gprot) APeptideOpioidμHomo sapiensPeptideMPAM-152.842025-08-06To be published
9PXUAPeptideOpioidμHomo sapiensNaloxoneNa-3.42025-11-1210.1038/s41586-025-09677-6
9PXVAPeptideOpioidμHomo sapiensNaloxone-Gi1/β1/γ23.022025-11-1210.1038/s41586-025-09677-6
9PXV (No Gprot) APeptideOpioidμHomo sapiensNaloxone-3.022025-11-1210.1038/s41586-025-09677-6
9PXWAPeptideOpioidμHomo sapiensNaloxoneGDPβSGi1/β1/γ23.82025-11-1210.1038/s41586-025-09677-6
9PXW (No Gprot) APeptideOpioidμHomo sapiensNaloxoneGDPβS3.82025-11-1210.1038/s41586-025-09677-6
9PXXAPeptideOpioidμHomo sapiensNaloxoneGDPβSGi1/β1/γ23.12025-11-1210.1038/s41586-025-09677-6
9PXX (No Gprot) APeptideOpioidμHomo sapiensNaloxoneGDPβS3.12025-11-1210.1038/s41586-025-09677-6
9PXYAPeptideOpioidμHomo sapiensNaloxoneGDPβSGi1/β1/γ232025-11-1210.1038/s41586-025-09677-6
9PXY (No Gprot) APeptideOpioidμHomo sapiensNaloxoneGDPβS32025-11-1210.1038/s41586-025-09677-6
9PY2APeptideOpioidμHomo sapiensLoperamideGDPβSGi1/β1/γ23.162025-11-1210.1038/s41586-025-09677-6
9PY2 (No Gprot) APeptideOpioidμHomo sapiensLoperamideGDPβS3.162025-11-1210.1038/s41586-025-09677-6
9PY3APeptideOpioidμHomo sapiensLoperamideGDPβSGi1/β1/γ23.22025-11-12To be published
9PY3 (No Gprot) APeptideOpioidμHomo sapiensLoperamideGDPβS3.22025-11-12To be published
9PY4APeptideOpioidμHomo sapiensLoperamideGDPβSGi1/β1/γ22.782025-11-1210.1038/s41586-025-09677-6
9PY4 (No Gprot) APeptideOpioidμHomo sapiensLoperamideGDPβS2.782025-11-1210.1038/s41586-025-09677-6
9ODJAPeptideOpioidμMus musculusMitragynine PseudoindoxylGTP; MgGi1/β1/γ232026-01-0710.1038/s41586-025-10056-4
9ODJ (No Gprot) APeptideOpioidμMus musculusMitragynine PseudoindoxylGTP; Mg32026-01-0710.1038/s41586-025-10056-4
9ODKAPeptideOpioidμMus musculus-GTP; MgGi1/β1/γ23.92026-01-0710.1038/s41586-025-10056-4
9ODK (No Gprot) APeptideOpioidμMus musculus-GTP; Mg3.92026-01-0710.1038/s41586-025-10056-4
9ODLAPeptideOpioidμMus musculusMitragynine PseudoindoxylGTP; MgGi1/β1/γ23.62026-01-0710.1038/s41586-025-10056-4
9ODL (No Gprot) APeptideOpioidμMus musculusMitragynine PseudoindoxylGTP; Mg3.62026-01-0710.1038/s41586-025-10056-4




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