Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:?1 8.1031020
2R:R:Y75 7.39407
3R:R:V89 3.1375409
4R:R:I105 3.334506
5R:R:Y106 3.91607
6R:R:D114 6.97549
7R:R:L121 5.515407
8R:R:W133 8.69286718
9R:R:F135 7.794517
10R:R:Y149 5.826564
11R:R:N150 3.584568
12R:R:M151 3.0675407
13R:R:Y166 6.5425408
14R:R:W192 8.062569
15R:R:T208 5.4825415
16R:R:I215 5.425414
17R:R:F221 4.15405
18R:R:Y252 6.6175409
19R:R:L259 2.855408
20R:R:W293 4.658508
21R:R:H297 4.325408
22R:R:Y299 5.3875484
23R:R:H319 9.3825434
24R:R:N332 7.4925449
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:?1 R:R:Y75 16.20978.06YesYes007
2L:L:?1 R:R:Y326 19.295612.45YesNo207
3R:R:L121 R:R:Y326 17.78328.21YesNo077
4L:L:?1 R:R:M151 54.97543.53YesYes007
5R:R:M151 R:R:W293 56.4053.49YesYes078
6R:R:N328 R:R:W293 1009.04NoYes098
7R:R:N328 R:R:N332 84.988912.26NoYes099
8R:R:D114 R:R:N332 31.15986.73YesYes499
9L:L:?1 R:R:H297 58.81534.02YesYes008
10R:R:H297 R:R:W293 62.29794.23YesYes088
11R:R:D114 R:R:N86 31.15986.73YesNo099
12R:R:N86 R:R:P333 27.15864.89NoNo099
13R:R:P333 R:R:V89 25.80743.53NoYes099
14R:R:A337 R:R:V89 21.70163.39NoYes079
15R:R:L110 R:R:N332 38.77875.49NoYes499
16R:R:L110 R:R:T157 42.91945.9NoNo097
17R:R:N109 R:R:T157 41.84724.39NoNo097
18R:R:N109 R:R:N188 22.582113.62NoNo097
19R:R:I105 R:R:N188 19.86232.83YesNo067
20R:R:A337 R:R:F343 16.10512.77NoNo079
21R:R:F343 R:R:T97 10.36926.49NoNo096
22R:R:I105 R:R:P181 10.36921.69YesNo061
23R:R:L158 R:R:N332 17.61325.49NoYes089
24R:R:L158 R:R:Y336 16.46254.69NoNo089
25R:R:M161 R:R:Y336 14.43147.18NoNo089
26R:R:M161 R:R:Y106 13.41154.79NoYes087
27R:R:N109 R:R:W192 22.381611.3NoYes099
28L:L:?1 R:R:Q124 58.3018.32YesNo006
29R:R:N127 R:R:Q124 56.97166.6NoNo066
30R:R:N127 R:R:W133 55.63357.91NoYes068
31R:R:F135 R:R:W133 25.310617.04YesYes178
32R:R:F123 R:R:F135 20.84739.65NoYes167
33R:R:F123 R:R:V143 19.34793.93NoNo065
34R:R:T208 R:R:W133 17.54353.64YesYes158
35R:R:N137 R:R:T208 16.25337.31NoYes015
36R:R:K141 R:R:N137 14.66688.39NoNo061
37R:R:I144 R:R:V143 17.78323.07NoNo055
38R:R:I144 R:R:L219 14.58832.85NoNo755
39R:R:F289 R:R:W293 43.43373.01NoYes098
40R:R:F289 R:R:I248 37.46243.77NoNo098
41R:R:I248 R:R:S162 36.2423.1NoNo089
42R:R:C251 R:R:S162 19.58333.44NoNo079
43R:R:S162 R:R:Y252 16.889710.17NoYes099
44R:R:C251 R:R:Y166 16.88976.72NoYes078
45R:R:M255 R:R:Y252 10.00313.59NoYes089
46R:R:F221 R:R:L219 13.03677.31YesNo055
47R:R:K141 R:R:T207 13.07151.5NoNo065
48R:R:T207 R:R:T220 11.46767.85NoNo054
49R:R:F241 R:R:H297 11.64635.66NoYes088
50R:R:C292 R:R:N328 27.4556.3NoNo089
51R:R:C292 R:R:V288 26.16481.71NoNo086
52R:R:L335 R:R:V288 23.55844.47NoNo086
53R:R:L335 R:R:V334 22.24211.49NoNo086
54R:R:L339 R:R:V334 20.91711.49NoNo066
55R:R:L339 R:R:M281 18.24091.41NoNo068
56R:R:M281 R:R:R277 16.88972.48NoNo087
57R:R:N274 R:R:R277 14.16124.82NoNo057
58R:R:E270 R:R:N274 12.78395.26NoNo025
59L:L:?1 R:R:I322 20.9047.14YesNo005
60R:R:I322 R:R:W318 19.34799.4NoNo055
61R:R:K303 R:R:W318 12.9325.8NoNo845
62R:R:I308 R:R:K303 11.4372.91NoNo014
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:?1 R:R:Y75 8.06 2 Yes Yes 0 7 0 1
L:L:?1 R:R:Q124 8.32 2 Yes No 0 6 0 1
L:L:?1 R:R:D147 16.96 2 Yes No 0 6 0 1
L:L:?1 R:R:Y148 12.45 2 Yes No 0 4 0 1
L:L:?1 R:R:M151 3.53 2 Yes Yes 0 7 0 1
L:L:?1 R:R:I296 6.24 2 Yes No 0 6 0 1
L:L:?1 R:R:H297 4.02 2 Yes Yes 0 8 0 1
L:L:?1 R:R:I322 7.14 2 Yes No 0 5 0 1
L:L:?1 R:R:Y326 12.45 2 Yes No 0 7 0 1
R:R:S125 R:R:Y75 5.09 0 No Yes 6 7 2 1
R:R:H319 R:R:Y75 15.24 3 Yes Yes 4 7 2 1
R:R:L121 R:R:Y326 8.21 0 Yes No 7 7 2 1
R:R:N127 R:R:Q124 6.6 0 No No 6 6 2 1
R:R:D147 R:R:Y326 5.75 2 No No 6 7 1 1
R:R:F152 R:R:M151 3.73 0 No Yes 7 7 2 1
R:R:M151 R:R:W293 3.49 0 Yes Yes 7 8 1 2
R:R:K233 R:R:V300 4.55 0 No No 4 5 2 1
R:R:F237 R:R:H297 3.39 0 No Yes 5 8 2 1
R:R:F241 R:R:H297 5.66 0 No Yes 8 8 2 1
R:R:H297 R:R:W293 4.23 0 Yes Yes 8 8 1 2
R:R:I322 R:R:W318 9.4 0 No No 5 5 1 2
R:R:V202 R:R:Y148 2.52 0 No No 5 4 2 1
R:R:L232 R:R:Y148 2.34 0 No No 5 4 2 1
L:L:?1 R:R:V300 1.86 2 Yes No 0 5 0 1
R:R:M151 R:R:V236 1.52 0 Yes No 7 5 1 2
R:R:L74 R:R:Y75 1.17 0 No Yes 5 7 2 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 9ODJ_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 2.83
Number of Linked Nodes 256
Number of Links 267
Number of Hubs 24
Number of Links mediated by Hubs 100
Number of Communities 8
Number of Nodes involved in Communities 30
Number of Links involved in Communities 34
Path Summary
Number Of Nodes in MetaPath 63
Number Of Links MetaPath 62
Number of Shortest Paths 42638
Length Of Smallest Path 3
Average Path Length 13.2722
Length of Longest Path 31
Minimum Path Strength 1.195
Average Path Strength 5.74418
Maximum Path Strength 18.315
Minimum Path Correlation 0.7
Average Path Correlation 0.968549
Maximum Path Correlation 1
Minimum % Of Corr. Nodes 10
Average % Of Corr. Nodes 72.3183
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 34.4442
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function• D2 dopamine receptor binding   • protein binding   • binding   • signaling receptor binding   • G protein-coupled receptor binding   • dopamine receptor binding   • enzyme regulator activity   • adenylate cyclase inhibitor activity   • cyclase regulator activity   • molecular function inhibitor activity   • cyclase inhibitor activity   • molecular function regulator activity   • enzyme inhibitor activity   • adenylate cyclase regulator activity   • guanyl nucleotide binding   • GTP binding   • nucleotide binding   • guanyl ribonucleotide binding   • purine ribonucleotide binding   • purine ribonucleoside triphosphate binding   • nucleoside phosphate binding   • ion binding   • purine nucleotide binding   • anion binding   • heterocyclic compound binding   • carbohydrate derivative binding   • ribonucleotide binding   • small molecule binding   • cation binding   • magnesium ion binding   • metal ion binding   • GDP binding   • G protein-coupled serotonin receptor binding   • protein-containing complex binding   • G-protein beta/gamma-subunit complex binding   • pyrophosphatase activity   • GTPase activity   • G protein activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • cell communication   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction   • neuropeptide signaling pathway   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway
Gene OntologyBiological Process• cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • cell communication   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction   • neuropeptide signaling pathway   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • response to hormone   • response to chemical   • response to endogenous stimulus   • response to peptide hormone   • response to oxygen-containing compound   • response to nitrogen compound   • cell division   • leukocyte migration   • immune system process   • mononuclear cell migration   • lymphocyte migration   • cell migration   • T cell migration   • cell motility   • regulation of steroid biosynthetic process   • regulation of cholesterol biosynthetic process   • regulation of cholesterol metabolic process   • steroid metabolic process   • regulation of lipid metabolic process   • sterol metabolic process   • positive regulation of biological process   • cholesterol metabolic process   • lipid biosynthetic process   • alcohol metabolic process   • regulation of primary metabolic process   • positive regulation of metabolic process   • regulation of small molecule metabolic process   • positive regulation of biosynthetic process   • positive regulation of lipid metabolic process   • small molecule metabolic process   • steroid biosynthetic process   • positive regulation of cellular process   • regulation of biosynthetic process   • secondary alcohol biosynthetic process   • regulation of alcohol biosynthetic process   • small molecule biosynthetic process   • regulation of steroid metabolic process   • cholesterol biosynthetic process   • positive regulation of cholesterol biosynthetic process   • primary metabolic process   • secondary alcohol metabolic process   • positive regulation of steroid biosynthetic process   • biosynthetic process   • sterol biosynthetic process   • positive regulation of lipid biosynthetic process   • regulation of sterol biosynthetic process   • alcohol biosynthetic process   • positive regulation of cholesterol metabolic process   • positive regulation of steroid metabolic process   • metabolic process   • regulation of lipid biosynthetic process   • positive regulation of small molecule metabolic process   • regulation of metabolic process   • positive regulation of alcohol biosynthetic process   • positive regulation of sterol biosynthetic process   • lipid metabolic process   • cell surface receptor signaling pathway   • response to cytokine   • response to chemokine   • cytokine-mediated signaling pathway   • cellular response to chemokine   • chemokine-mediated signaling pathway   • response to peptide   • cellular response to cytokine stimulus   • multicellular organismal process   • system process   • relaxation of smooth muscle   • regulation of system process   • regulation of muscle system process   • muscle system process   • relaxation of muscle   • positive regulation of relaxation of smooth muscle   • positive regulation of relaxation of muscle   • positive regulation of multicellular organismal process   • regulation of multicellular organismal process   • regulation of relaxation of smooth muscle   • regulation of relaxation of muscle   • negative regulation of protein transport   • regulation of localization   • establishment of protein localization   • nitrogen compound transport   • negative regulation of biological process   • negative regulation of transport   • localization   • negative regulation of secretion   • negative regulation of hormone secretion   • negative regulation of secretion by cell   • intracellular protein localization   • regulation of biological quality   • regulation of peptide hormone secretion   • negative regulation of peptide hormone secretion   • regulation of hormone levels   • establishment of protein localization to extracellular region   • negative regulation of establishment of protein localization   • protein secretion   • establishment of localization   • regulation of protein secretion   • regulation of secretion   • negative regulation of protein secretion   • regulation of hormone secretion   • regulation of protein localization   • regulation of peptide secretion   • transport   • negative regulation of signaling   • hormone secretion   • negative regulation of cell communication   • protein localization to extracellular region   • negative regulation of peptide secretion   • peptide secretion   • regulation of secretion by cell   • secretion by cell   • signal release   • negative regulation of cellular process   • negative regulation of protein localization   • regulation of signaling   • regulation of transport   • secretion   • regulation of peptide transport   • regulation of establishment of protein localization   • export from cell   • cell-cell signaling   • regulation of protein transport   • peptide transport   • negative regulation of insulin secretion   • protein transport   • regulation of insulin secretion   • peptide hormone secretion   • macromolecule localization   • hormone transport   • regulation of cell communication   • insulin secretion   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • regulation of cytoskeleton organization   • regulation of cellular component organization   • microtubule cytoskeleton organization   • regulation of mitotic spindle organization   • mitotic cell cycle   • cellular component organization   • cell cycle   • cellular component organization or biogenesis   • regulation of cell cycle   • microtubule cytoskeleton organization involved in mitosis   • spindle organization   • cell cycle process   • regulation of cell cycle process   • regulation of microtubule-based process   • regulation of spindle organization   • regulation of organelle organization   • mitotic spindle organization   • organelle organization   • mitotic cell cycle process   • microtubule-based process   • cytoskeleton organization   • regulation of microtubule cytoskeleton organization   • positive regulation of protein localization to cell periphery   • protein localization to cell periphery   • positive regulation of protein localization to cell cortex   • regulation of protein localization to cell periphery   • regulation of protein localization to cell cortex   • positive regulation of protein localization   • protein localization to cell cortex   • response to ketone   • response to prostaglandin   • response to lipid   • response to alcohol   • response to prostaglandin E   • cellular response to forskolin   • cellular response to oxygen-containing compound   • cellular response to chemical stimulus   • cellular response to alcohol   • response to forskolin   • cellular response to lipid   • cellular response to ketone   • midbody   • cellular anatomical structure   • membrane-bounded organelle   • intracellular anatomical structure   • nucleus   • membrane-enclosed lumen   • intracellular membraneless organelle   • intracellular membrane-bounded organelle   • nucleolus   • intracellular organelle lumen   • intracellular organelle   • organelle lumen   • organelle   • membraneless organelle
Gene OntologyCellular Component• midbody   • cellular anatomical structure   • membrane-bounded organelle   • intracellular anatomical structure   • nucleus   • membrane-enclosed lumen   • intracellular membraneless organelle   • intracellular membrane-bounded organelle   • nucleolus   • intracellular organelle lumen   • intracellular organelle   • organelle lumen   • organelle   • membraneless organelle   • nuclear lumen   • cell periphery   • cell cortex   • cytoplasm   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • membrane   • plasma membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cytoplasmic side of plasma membrane   • GTPase complex   • extrinsic component of membrane   • extrinsic component of cytoplasmic side of plasma membrane   • extracellular exosome   • extracellular vesicle   • extracellular organelle   • extracellular region   • extracellular space   • vesicle   • extracellular membrane-bounded organelle   • centrosome   • microtubule organizing center   • cytoskeleton   • microtubule cytoskeleton   • centriolar satellite   • cytosol   • cell projection   • sperm principal piece   • cilium   • 9+2 motile cilium   • sperm flagellum   • motile cilium   • plasma membrane bounded cell projection   • nucleoplasm   • vacuolar membrane   • lytic vacuole   • vacuole   • lytic vacuole membrane   • bounding membrane of organelle   • lysosomal membrane   • organelle membrane   • lysosome   • Golgi apparatus   • endomembrane system   • ciliary basal body   • binding   • neuropeptide binding   • peptide binding   • protein binding   • G-protein alpha-subunit binding   • peptide receptor activity   • molecular transducer activity   • beta-endorphin receptor activity   • G protein-coupled opioid receptor activity   • G protein-coupled receptor activity   • transmembrane signaling receptor activity   • signaling receptor activity   • G protein-coupled peptide receptor activity   • melanocortin receptor activity   • neuropeptide receptor activity   • morphine receptor activity   • protein domain specific binding   • calcium channel activity   • monoatomic cation transmembrane transporter activity   • voltage-gated calcium channel activity   • gated channel activity   • monoatomic ion channel activity   • voltage-gated channel activity   • voltage-gated monoatomic ion channel activity   • voltage-gated monoatomic cation channel activity   • monoatomic cation channel activity   • passive transmembrane transporter activity   • calcium ion transmembrane transporter activity   • channel activity   • monoatomic ion transmembrane transporter activity   • transporter activity   • metal ion transmembrane transporter activity   • transmembrane transporter activity   • G-protein beta-subunit binding   • trans-synaptic signaling   • regulation of biological process   • regulation of signaling   • regulation of cellular process   • modulation of chemical synaptic transmission   • signaling   • biological regulation   • cell-cell signaling   • presynaptic modulation of chemical synaptic transmission   • chemical synaptic transmission   • cell communication   • synaptic signaling   • regulation of trans-synaptic signaling   • anterograde trans-synaptic signaling   • regulation of cell communication   • cellular process   • cellular response to stimulus   • response to stimulus   • G protein-coupled opioid receptor signaling pathway   • G protein-coupled receptor signaling pathway   • signal transduction   • multi-multicellular organism process   • multicellular organismal process   • sperm ejaculation   • reproductive process   • multicellular organismal reproductive process   • mating behavior   • behavior   • reproductive behavior   • insemination   • multi-organism reproductive process   • copulation   • system process   • nervous system process   • transmission of nerve impulse   • phospholipase C-activating G protein-coupled receptor signaling pathway   • regulation of biological quality   • negative regulation of cytosolic calcium ion concentration   • negative regulation of signaling   • negative regulation of biological process   • regulation of signal transduction   • negative regulation of G protein-coupled receptor signaling pathway   • negative regulation of cell communication   • negative regulation of cellular process   • regulation of G protein-coupled receptor signaling pathway   • negative regulation of response to stimulus   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • negative regulation of signal transduction   • negative regulation of adenylate cyclase-activating G protein-coupled receptor signaling pathway   • regulation of response to stimulus   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • regulation of adenylate cyclase-activating G protein-coupled receptor signaling pathway   • positive regulation of nervous system development   • regulation of developmental process   • cellular developmental process   • positive regulation of biological process   • cell development   • regulation of cell differentiation   • regulation of neurogenesis   • regulation of cell development   • regulation of nervous system development   • positive regulation of developmental process   • multicellular organism development   • neurogenesis   • positive regulation of cell differentiation   • cell differentiation   • anatomical structure development   • positive regulation of neurogenesis   • regulation of multicellular organismal process   • positive regulation of cellular process   • system development   • developmental process   • regulation of multicellular organismal development   • positive regulation of cell development   • nervous system development   • positive regulation of multicellular organismal process   • cellular response to nitrogen compound   • response to dopamine   • cellular response to dopamine   • response to monoamine   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • G protein-coupled dopamine receptor signaling pathway   • response to oxygen-containing compound   • response to nitrogen compound   • cellular response to oxygen-containing compound   • cellular response to chemical stimulus   • cellular response to monoamine stimulus   • response to chemical   • neuropeptide signaling pathway   • monosaccharide metabolic process   • gluconeogenesis   • regulation of primary metabolic process   • positive regulation of metabolic process   • regulation of small molecule metabolic process   • positive regulation of biosynthetic process   • small molecule metabolic process   • regulation of carbohydrate metabolic process   • regulation of glucose metabolic process   • positive regulation of gluconeogenesis   • regulation of biosynthetic process   • carbohydrate metabolic process   • small molecule biosynthetic process   • carbohydrate biosynthetic process   • hexose metabolic process   • primary metabolic process   • monosaccharide biosynthetic process   • hexose biosynthetic process   • positive regulation of glucose metabolic process   • biosynthetic process   • regulation of gluconeogenesis   • metabolic process   • positive regulation of carbohydrate metabolic process   • regulation of carbohydrate biosynthetic process   • positive regulation of small molecule metabolic process   • regulation of metabolic process   • glucose metabolic process   • locomotory behavior   • cellular response to acetylcholine   • acetylcholine receptor signaling pathway   • postsynaptic signal transduction   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • G protein-coupled acetylcholine receptor signaling pathway   • response to acetylcholine   • adenylate cyclase-inhibiting G protein-coupled acetylcholine receptor signaling pathway   • positive regulation of cell communication   • positive regulation of signal transduction   • intracellular signal transduction   • positive regulation of response to stimulus   • positive regulation of ERK1 and ERK2 cascade   • regulation of intracellular signal transduction   • intracellular signaling cassette   • positive regulation of MAPK cascade   • positive regulation of intracellular signal transduction   • regulation of MAPK cascade   • MAPK cascade   • ERK1 and ERK2 cascade   • regulation of ERK1 and ERK2 cascade   • positive regulation of signaling   • regulation of localization   • transport   • regulation of signaling receptor activity   • regulation of transmembrane transporter activity   • localization   • regulation of NMDA receptor activity   • regulation of transport   • establishment of localization   • transmembrane transport   • regulation of molecular function   • regulation of transmembrane transport   • regulation of neurotransmitter receptor activity   • negative regulation of luteinizing hormone secretion   • regulation of system process   • negative regulation of transport   • negative regulation of secretion   • regulation of luteinizing hormone secretion   • luteinizing hormone secretion   • negative regulation of hormone secretion   • negative regulation of secretion by cell   • regulation of hormone levels   • regulation of secretion   • endocrine hormone secretion   • negative regulation of gonadotropin secretion   • negative regulation of multicellular organismal process   • regulation of endocrine process   • regulation of hormone secretion   • gonadotropin secretion   • hormone secretion   • secretion by cell   • regulation of secretion by cell   • signal release   • secretion   • regulation of gonadotropin secretion   • export from cell   • endocrine process   • hormone transport   • eating behavior   • feeding behavior   • regulation of cellular response to stress   • cellular response to stress   • regulation of response to stress   • response to stress   • adenylate cyclase-inhibiting opioid receptor signaling pathway   • regulation of nitric oxide biosynthetic process   • negative regulation of metabolic process   • reactive nitrogen species metabolic process   • nitric oxide metabolic process   • nitric oxide biosynthetic process   • negative regulation of nitric oxide biosynthetic process   • negative regulation of biosynthetic process   • regulation of nitric oxide metabolic process   • response to nutrient levels   • regulation of response to nutrient levels   • positive regulation of appetite   • regulation of response to food   • response to food   • positive regulation of response to food   • regulation of appetite   • positive regulation of response to nutrient levels   • adult behavior   • response to alcohol   • behavioral response to ethanol   • response to ethanol   • regulation of postsynaptic membrane potential   • chemical synaptic transmission, postsynaptic   • cell surface receptor signaling pathway   • excitatory postsynaptic potential   • regulation of membrane potential   • biological process involved in intraspecies interaction between organisms   • social behavior   • sensory perception   • sensory perception of pain   • negative regulation of protein transport   • establishment of protein localization   • regulation of protein localization   • negative regulation of Wnt protein secretion   • protein localization to extracellular region   • intracellular protein localization   • regulation of Wnt protein secretion   • negative regulation of protein localization   • establishment of protein localization to extracellular region   • regulation of establishment of protein localization   • negative regulation of establishment of protein localization   • regulation of protein transport   • Wnt protein secretion   • protein secretion   • regulation of protein secretion   • negative regulation of protein secretion   • protein transport   • macromolecule localization   • postsynapse   • postsynaptic membrane   • synapse   • cell junction   • plasma membrane region   • synaptic membrane   • sarcolemma   • T-tubule   • somatodendritic compartment   • cell body   • perikaryon   • neuronal cell body   • presynapse   • presynaptic membrane   • dendrite   • dendritic tree   • neuron projection   • sarcoplasm   • endoplasmic reticulum   • sarcoplasmic reticulum   • axon   • mitochondrion   • anchoring junction   • focal adhesion   • cell-substrate junction   • GABA-ergic synapse   • neuron projection cytoplasm   • dendrite cytoplasm   • cell leading edge   • leading edge membrane   • neuron projection membrane   • dendrite membrane   • cell projection membrane   • endosome   • intracellular vesicle   • cytoplasmic vesicle   • neuron spine   • dendritic spine   • spine apparatus   • fibroblast proliferation   • cell population proliferation   • response to ketone   • response to prostaglandin   • response to lipid   • response to endogenous stimulus   • cellular response to prostaglandin stimulus   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to alcohol   • response to hormone   • cellular response to lipid   • response to prostaglandin E   • cellular response to ketone   • cellular response to hormone stimulus   • enzyme binding   • GTPase binding   • protein-containing complex binding   • pyrophosphatase activity   • GTPase activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • signaling receptor complex adaptor activity   • protein-macromolecule adaptor activity   • molecular adaptor activity   • signaling adaptor activity   • sensory perception of chemical stimulus   • sensory perception of taste   • sensory organ development   • eye development   • animal organ development   • retina development in camera-type eye   • visual system development   • camera-type eye development   • sensory system development   • small GTPase-mediated signal transduction   • Ras protein signal transduction   • non-motile cilium   • 9+0 non-motile cilium   • photoreceptor disc membrane   • photoreceptor outer segment   • photoreceptor cell cilium
SCOP2Domain Identifier• Ras-like P-loop GTPases   • Galpha insert domain-like   • G protein-coupled receptor-like   • Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• Ras-like P-loop GTPases   • Galpha insert domain-like   • G protein-coupled receptor-like   • Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeMG
PDB ResiduesI:I:?1
Environment DetailsOpen EMBL-EBI Page
CodeMG
NameMAGNESIUM ION
Synonyms
Identifier
FormulaMg
Molecular Weight24.305
SMILES
PubChem
Formal Charge2
Total Atoms1
Total Chiral Atoms0
Total Bonds0
Total Aromatic Bonds0

CodeEIG
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodeEIG
NameMitragynine pseudoindoxyl
Synonymsmethyl (2E)-4-[(2S,2'S)-1'-butyl-4-methoxy-3-oxo-1,3-dihydrospiro[indole-2,3'-pyrrolidin]-2'-yl]-2-(methoxymethylidene)butanoate
Identifier
FormulaC23 H30 N2 O5
Molecular Weight414.495
SMILES
PubChem44301701
Formal Charge0
Total Atoms60
Total Chiral Atoms4
Total Bonds63
Total Aromatic Bonds6

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP42866
Sequence
>9ODJ_nogp_Chain_R
TAITIMALY SIVCVVGLF GNFLVMYVI VRYTKMKTA TNIYIFNLA 
LADALATST LPFQSVNYL MGTWPFGNI LCKIVISID YYNMFTSIF 
TLCTMSVDR YIAVCHPVK ALDFRTPRN AKIVNVCNW ILSSAIGLP 
VMFMATTKY RQGSIDCTL TFSHPTWYW ENLLKICVF IFAFIMPVL 
IITVCYGLM ILRLKSVRM LSGSKEKDR NLRRITRMV LVVVAVFIV 
CWTPIHIYV IIKALITIP ETTFQTVSW HFCIALGYT NSCLNPVLY 
AFLDENFKR


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
4DKLAPeptideOpioidμMus musculusβ-Funaltrexamine--2.82012-03-21doi.org/10.1038/nature10954
5C1MAPeptideOpioidμMus musculusBU72--2.072015-08-05doi.org/10.1038/nature14886
6DDEAPeptideOpioidμMus musculusDAMGO-Gi1/β1/γ23.52018-06-13doi.org/10.1038/s41586-018-0219-7
6DDE (No Gprot) APeptideOpioidμMus musculusDAMGO-3.52018-06-13doi.org/10.1038/s41586-018-0219-7
6DDFAPeptideOpioidμMus musculusDAMGO-Gi1/β1/γ23.52018-06-13doi.org/10.1038/s41586-018-0219-7
6DDF (No Gprot) APeptideOpioidμMus musculusDAMGO-3.52018-06-13doi.org/10.1038/s41586-018-0219-7
7SBFAPeptideOpioidμMus musculusPZM21-Gi1/β1/γ22.92022-04-20doi.org/10.1002/anie.202200269
7SBF (No Gprot) APeptideOpioidμMus musculusPZM21-2.92022-04-20doi.org/10.1002/anie.202200269
7SCGAPeptideOpioidμMus musculusFH210-Gi1/β1/γ232022-04-20doi.org/10.1002/anie.202200269
7SCG (No Gprot) APeptideOpioidμMus musculusFH210-32022-04-20doi.org/10.1002/anie.202200269
7U2LAPeptideOpioidμMus musculusC5-guano-Gi1/β1/γ23.22022-05-04doi.org/10.1038/s41586-022-05588-y
7U2L (No Gprot) APeptideOpioidμMus musculusC5-guano-3.22022-05-04doi.org/10.1038/s41586-022-05588-y
7UL4APeptideOpioidμMus musculusAlvimopan--2.82022-06-29doi.org/10.1038/s41594-022-00859-8
8EF5APeptideOpioidμHomo sapiensFentanyl-Gi1/β1/γ23.32022-11-09doi.org/10.1016/j.cell.2022.09.041
8EF5 (No Gprot) APeptideOpioidμHomo sapiensFentanyl-3.32022-11-09doi.org/10.1016/j.cell.2022.09.041
8EF6APeptideOpioidμHomo sapiensMorphine-Gi1/β1/γ23.22022-11-09doi.org/10.1016/j.cell.2022.09.041
8EF6 (No Gprot) APeptideOpioidμHomo sapiensMorphine-3.22022-11-09doi.org/10.1016/j.cell.2022.09.041
8EFBAPeptideOpioidμHomo sapiensOliceridine-Gi1/β1/γ23.22022-11-09doi.org/10.1016/j.cell.2022.09.041
8EFB (No Gprot) APeptideOpioidμHomo sapiensOliceridine-3.22022-11-09doi.org/10.1016/j.cell.2022.09.041
8EFLAPeptideOpioidμHomo sapiensSR17018-Gi1/β1/γ23.22022-11-09doi.org/10.1016/j.cell.2022.09.041
8EFL (No Gprot) APeptideOpioidμHomo sapiensSR17018-3.22022-11-09doi.org/10.1016/j.cell.2022.09.041
8EFOAPeptideOpioidμHomo sapiensPZM21-Gi1/β1/γ22.82022-11-09doi.org/10.1016/j.cell.2022.09.041
8EFO (No Gprot) APeptideOpioidμHomo sapiensPZM21-2.82022-11-09doi.org/10.1016/j.cell.2022.09.041
8EFQAPeptideOpioidμHomo sapiensDAMGO-Gi1/β1/γ23.32022-11-09doi.org/10.1016/j.cell.2022.09.041
8EFQ (No Gprot) APeptideOpioidμHomo sapiensDAMGO-3.32022-11-09doi.org/10.1016/j.cell.2022.09.041
7T2GAPeptideOpioidμMus musculusMitragynine Pseudoindoxyl-Gi1/β1/γ22.52022-12-07doi.org/10.1038/s41589-022-01208-y
7T2G (No Gprot) APeptideOpioidμMus musculusMitragynine Pseudoindoxyl-2.52022-12-07doi.org/10.1038/s41589-022-01208-y
7T2HAPeptideOpioidμMus musculusLofentanil-Gi1/β1/γ22.52022-12-07doi.org/10.1038/s41589-022-01208-y
7T2H (No Gprot) APeptideOpioidμMus musculusLofentanil-2.52022-12-07doi.org/10.1038/s41589-022-01208-y
7U2KAPeptideOpioidμMus musculusC6-guano-Gi1/β1/γ23.32022-12-07doi.org/10.1038/s41586-022-05588-y
7U2K (No Gprot) APeptideOpioidμMus musculusC6-guano-3.32022-12-07doi.org/10.1038/s41586-022-05588-y
8F7QAPeptideOpioidμHomo sapiensβ-Endorphin-Gi1/β1/γ23.222022-12-14doi.org/10.1016/j.cell.2022.12.026
8F7Q (No Gprot) APeptideOpioidμHomo sapiensβ-Endorphin-3.222022-12-14doi.org/10.1016/j.cell.2022.12.026
8F7RAPeptideOpioidμHomo sapiensEndomorphin-Gi1/β1/γ23.282022-12-14doi.org/10.1016/j.cell.2022.12.026
8F7R (No Gprot) APeptideOpioidμHomo sapiensEndomorphin-3.282022-12-14doi.org/10.1016/j.cell.2022.12.026
8K9KAPeptideOpioidμHomo sapiensDAMGO-Gi3/β1/γ12.982024-05-29doi.org/10.1038/s41467-024-47792-6
8K9K (No Gprot) APeptideOpioidμHomo sapiensDAMGO-2.982024-05-29doi.org/10.1038/s41467-024-47792-6
8K9LAPeptideOpioidμHomo sapiensDAMGOBMS-986122Gi3/β1/γ13.052024-05-29doi.org/10.1038/s41467-024-47792-6
8K9L (No Gprot) APeptideOpioidμHomo sapiensDAMGOBMS-9861223.052024-05-29doi.org/10.1038/s41467-024-47792-6
9BJKAPeptideOpioidμMus musculusNaloxonePubChem 171642066-3.262024-07-17doi.org/10.1038/s41586-024-07587-7
9BQJAPeptideOpioidμMus musculusRO76-Gi1/β1/γ23.32024-09-11doi.org/10.1021/acscentsci.4c00525
9BQJ (No Gprot) APeptideOpioidμMus musculusRO76-3.32024-09-11doi.org/10.1021/acscentsci.4c00525
9MQHAPeptideOpioidμHomo sapiens---3.92025-02-12doi.org/10.1101/2025.01.09.632033
9MQIAPeptideOpioidμHomo sapiensIsoquinuclidine--3.32025-02-12doi.org/10.1101/2025.01.09.632033
9MQJAPeptideOpioidμHomo sapiensIsoquinuclidine--3.232025-02-12doi.org/10.1101/2025.01.09.632033
9WSTAPeptideOpioidμHomo sapiensDAMGO-chim(NtGi1-Gz)/β1/γ22.82025-11-2610.1038/s41422-025-01191-8
9WST (No Gprot) APeptideOpioidμHomo sapiensDAMGO-2.82025-11-2610.1038/s41422-025-01191-8
9WSVAPeptideOpioidμHomo sapiensDAMGO-Arrestin22.82025-11-2610.1038/s41422-025-01191-8
9WSV (No Gprot) APeptideOpioidμHomo sapiensDAMGO-2.82025-11-2610.1038/s41422-025-01191-8
9WSWAPeptideOpioidμHomo sapiensEndomorphin-chim(NtGi1-Gz)/β1/γ22.82025-11-2610.1038/s41422-025-01191-8
9WSW (No Gprot) APeptideOpioidμHomo sapiensEndomorphin-2.82025-11-2610.1038/s41422-025-01191-8
9WSXAPeptideOpioidμHomo sapiensEndomorphin-Arrestin22.82025-11-2610.1038/s41422-025-01191-8
9WSX (No Gprot) APeptideOpioidμHomo sapiensEndomorphin-2.82025-11-2610.1038/s41422-025-01191-8
8E0GAPeptideOpioidμMus musculusBU72--2.12023-10-18doi.org/10.1186/s12915-023-01689-w
8QOTAPeptideOpioidμMus musculusNanobody-E--3.22023-12-27doi.org/10.1101/2023.12.06.570395
8Y72APeptideOpioidμHomo sapiensPeptideBMS-986122Gi1/β1/γ22.652025-08-06To be published
8Y72 (No Gprot) APeptideOpioidμHomo sapiensPeptideBMS-9861222.652025-08-06To be published
8Y73APeptideOpioidμHomo sapiensPeptideMPAM-15Gi1/β1/γ22.842025-08-06To be published
8Y73 (No Gprot) APeptideOpioidμHomo sapiensPeptideMPAM-152.842025-08-06To be published
9PXUAPeptideOpioidμHomo sapiensNaloxoneNa-3.42025-11-1210.1038/s41586-025-09677-6
9PXVAPeptideOpioidμHomo sapiensNaloxone-Gi1/β1/γ23.022025-11-1210.1038/s41586-025-09677-6
9PXV (No Gprot) APeptideOpioidμHomo sapiensNaloxone-3.022025-11-1210.1038/s41586-025-09677-6
9PXWAPeptideOpioidμHomo sapiensNaloxoneGDPβSGi1/β1/γ23.82025-11-1210.1038/s41586-025-09677-6
9PXW (No Gprot) APeptideOpioidμHomo sapiensNaloxoneGDPβS3.82025-11-1210.1038/s41586-025-09677-6
9PXXAPeptideOpioidμHomo sapiensNaloxoneGDPβSGi1/β1/γ23.12025-11-1210.1038/s41586-025-09677-6
9PXX (No Gprot) APeptideOpioidμHomo sapiensNaloxoneGDPβS3.12025-11-1210.1038/s41586-025-09677-6
9PXYAPeptideOpioidμHomo sapiensNaloxoneGDPβSGi1/β1/γ232025-11-1210.1038/s41586-025-09677-6
9PXY (No Gprot) APeptideOpioidμHomo sapiensNaloxoneGDPβS32025-11-1210.1038/s41586-025-09677-6
9PY2APeptideOpioidμHomo sapiensLoperamideGDPβSGi1/β1/γ23.162025-11-1210.1038/s41586-025-09677-6
9PY2 (No Gprot) APeptideOpioidμHomo sapiensLoperamideGDPβS3.162025-11-1210.1038/s41586-025-09677-6
9PY3APeptideOpioidμHomo sapiensLoperamideGDPβSGi1/β1/γ23.22025-11-12To be published
9PY3 (No Gprot) APeptideOpioidμHomo sapiensLoperamideGDPβS3.22025-11-12To be published
9PY4APeptideOpioidμHomo sapiensLoperamideGDPβSGi1/β1/γ22.782025-11-1210.1038/s41586-025-09677-6
9PY4 (No Gprot) APeptideOpioidμHomo sapiensLoperamideGDPβS2.782025-11-1210.1038/s41586-025-09677-6
9ODJAPeptideOpioidμMus musculusMitragynine PseudoindoxylGTP; MgGi1/β1/γ232026-01-0710.1038/s41586-025-10056-4
9ODJ (No Gprot) APeptideOpioidμMus musculusMitragynine PseudoindoxylGTP; Mg32026-01-0710.1038/s41586-025-10056-4
9ODKAPeptideOpioidμMus musculus-GTP; MgGi1/β1/γ23.92026-01-0710.1038/s41586-025-10056-4
9ODK (No Gprot) APeptideOpioidμMus musculus-GTP; Mg3.92026-01-0710.1038/s41586-025-10056-4
9ODLAPeptideOpioidμMus musculusMitragynine PseudoindoxylGTP; MgGi1/β1/γ23.62026-01-0710.1038/s41586-025-10056-4
9ODL (No Gprot) APeptideOpioidμMus musculusMitragynine PseudoindoxylGTP; Mg3.62026-01-0710.1038/s41586-025-10056-4




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Download 9ODJ_nogp.zip



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